Competency for natural transformation
Bacterial genetic competence for natural transformation is a physiological state
that permits uptake and incorporation of naked exogenous DNA. This process,
intensively studied in various gram-positive and gram-negative model organisms,
is probably the most versatile mechanism of DNA transfer.
| Table:
Acinetobacter baylyi ADP1 annotated genes involved in its competence |
|
| ACIAD number (links) |
Gene name |
Size (aa) |
Related species |
Identity % (length aa) |
AC/ID SWALL |
Description |
|
|
|
|
|
|
|
| 209 |
smf |
383 |
H. influenzae |
41.7 (373) |
SMF_HAEIN |
Putative protein involved in DNA
uptake |
| 242 |
comM |
495 |
H. influenzae |
49.5 (509) |
COMM_HAEIN |
Magnesium chelatase, competence
related protein |
| 360 |
pilD |
286 |
P. stutzeri |
52.3 (289) |
LEP4_PSEST |
Type 4 prepilin-like proteins
leader peptide processing enzyme |
| 361 |
pilC |
408 |
P. stutzeri |
58.9 (405) |
Q9ZEL5 |
Type 4 fimbrial assembly protein |
| 362 |
pilB |
579 |
P. stutzeri |
59.7 (567) |
Q9ZEL4 |
Type 4 fimbrial biogenesis protein |
| 911 |
pilU |
383 |
P.
stutzeri |
65.3
(382) |
Q9RLD5 |
Twitching
motility protein |
| 912 |
pilT |
344 |
P.
stutzeri |
83.4
(344) |
Q9RLD6 |
Twitching
motility protein |
| 2639 |
comA |
792 |
A. baylyi ADP1 |
100 (792) |
Q9EYM1 |
Competence factor involved in
DNA uptake |
| 2898 |
comL |
360 |
N. gonorhoeae |
34.1 (267) |
COML_NEIGO |
Putative competence protein |
| 3236 |
comF |
213 |
H. influenzae |
30.6 (229) |
COMF_HAEIN |
Putative DNA transformation
protein |
| 3314 |
comF |
144 |
A. baylyi ADP1 |
100 (144) |
Q9X2M5 |
Pilin
like competence factor |
| 3315 |
comE |
169 |
A. baylyi ADP1 |
100 (169) |
Q9X2M4 |
Pilin
like competence factor |
| 3316 |
comC |
1450 |
A. baylyi ADP1 |
100 (1208) |
O31068 |
Competence
factor involved in DNA binding and uptake |
| 3318 |
comB |
322 |
A. baylyi ADP1 |
100 (322) |
Q9RBI7 |
Pilin
like competence factor |
| 3338 |
comP |
147 |
A. baylyi ADP1 |
100 (147) |
O30583 |
Competence factor involved in
DNA binding and uptake |
| 3355 |
comQ |
723 |
A. baylyi ADP1 |
100 (723) |
Q9AM59 |
Putative
outer membrane protein |
| 3356 |
comL |
174 |
A. baylyi ADP1 |
100 (174) |
Q9AM60 |
Putative
lipoprotein |
| 3357 |
comO |
245 |
A. baylyi ADP1 |
100 (245) |
Q9AM61 |
Putative
membrane protein |
| 3359 |
comN |
212 |
A. baylyi ADP1 |
100 (212) |
Q9AM62 |
Putative
membrane protein |
| 3360 |
comM |
341 |
A. baylyi ADP1 |
100 (353) |
Q9AM63 |
Putative
membrane protein |