[an error occurred while processing this directive] Methylobacterium dichloromethanicum DM4 - Whole genome shotgun





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Methylobacterium dichloromethanicum DM4
Whole genome shotgun


-> Methylobacterium dichloromethanicum, a bacterium which is able to degrade dichloromethane






Genoscope is undertaking the sequencing of the complete genome of the DM4 strain of Methylobacterium dichloromethanicum, estimated at 7 Mb (based on the model strain AM1).
The genome will be sequenced at a depth of 12X, using three libraries:

  • a 3 kb insert library cloned in the multicopy plasmid vector pcdna2.1,
  • a 10 kb insert library in the pCNS plasmid vector (small copy number)
  • and a miniBAC library (~30kb inserts) in the pBBC vector (derived from pBeloBAC11).
Shotgun sequencing should produce about 120000 reads. A finishing step will increase the quality of the sequences obtained.

Contacts:
Valérie Barbe (Genoscope) - Stéphane Vuilleumier





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