In the frame of the ForEST project, cDNA libraries have
been prepared from roots with or without mycorrhiza, from leaves and
from wood of trees submitted to a mild water stress. From these
libraries, Genoscope has produced 5' sequencing of 55,000 ESTs,
i.e. presently 11,000 EST from leaves and more than 2,000 EST from
wood. The insert size varies between 0,4 to 1,8kb. This project
complement "Lignome" a previous project where more than 10,000 poplar
EST were determined and it will be completed by the sequencing of
more than 500 full length cDNA from poplar wood in the near
future. The relative distribution of the different Sequences among
the different cDNA libraries together with global expression analyses
using Affymetrix whole poplar genome DNA chips will help to identify
candidate genes important for tree adaptation to abiotic
stress. Investigations will help to define:
- their precise localisation in wood using immunochemical
methods,
- their function using genetic engineering
- and allelic variability in poplar natural populations.