[an error occurred while processing this directive] Herminiimonas arsenicoxydans sp. nov - Global random shotgun sequencing





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Herminiimonas arsenicoxydans sp. nov
Global random shotgun sequencing


-> Herminiimonas arsenicoxydans sp. nov., a metalloresitant bacterium

Collaboration
 Laboratoire de Microbiologie et de Génétique
Dynamique - Evolution - Expression des Génomes de Microorganismes
FRE 2326 ULP/CNRS
Strasbourg
For more information:
 Thiomonas spp, Genoscope's other sequencing projet, is a bacteria with the same detoxicate potential as Herminiimonas
 Web site of GDR about the metabolism of arsenic in prokaryotes.


Genoscope is undertaking the sequencing of the beta-proteobacterium, Herminiimonas arsenicoxydans sp. nov.: a bacterium capable of oxidizing and reducing arsenic with the goal of detoxification.

The size of this genome of this bacterium is extimated at about 5 Mb. The genome will be sequenced at 10X depth, using three libraries: about 25,000 inserts of 3 kb cloned in a pcdna2.1 vector (high copy number), about 8,000 inserts of 10 kb cloned in a pCNS vector (small copy number), and close to 4,000 inserts of 20-25 kb cloned in a miniBAC (pBBC) vector. A manual finishing step will be carried out at Genoscope.

Contacts:
Valérie Barbe (Genoscope) - Philippe Bertin (ULP/CNRS)





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