Nanopore
|
B. oleracea HDEM |
B. rapa Z1 |
B. napus Darmor-bzh |
M. schizocarpa |
M. acuminata Pahang |
A. halleri Auby1 |
Cumulative size |
20,081,668,921 |
31,496,053,430 |
111,984,129,880 |
25,852,838,525 |
92,749,841,432 |
29,413,554,426 |
Number of reads (> 1kb) |
1,242,230 |
3,763,611 |
15,831,026 |
2,554,197 |
5,185,398 |
3,322,114 |
N50 |
32,339 |
15,042 |
42,806 |
24,443 |
31,640 |
18,929 |
Link to ENA |
PRJEB26621 |
PRJEB46167 |
PRJEB39416 |
PRJEB26661 |
PRJEB35002 |
fastq.gz |
Bionano
|
B. oleracea HDEM |
B. rapa Z1 |
B. napus Darmor-bzh |
|
BspQI |
DLE |
BspQI |
DLE |
BspQI |
DLE |
Number of molecules |
3,487,923 |
12,184,456 |
6,489,688 |
9,118,635 |
2,124,074 |
16,646,860 |
Cumulative size (Mbp) |
345,728 |
1,175,790 |
481,008 |
480,100 |
223,164 |
1,340,608 |
Molecule N50 (kbp) |
176 |
128 |
178 |
156 |
178 |
101 |
Link to ENA |
ERZ650362 |
ERZ650362 |
ERZ650349 |
ERZ650349 |
ERZ1467253 |
ERZ1467253 |
|
M. schizocarpa |
M. acuminata Pahang |
|
BspQI |
DLE |
BspQI |
DLE |
Number of molecules |
8,107,001 |
19,663,778 |
2,897,832 |
2,151,406 |
Cumulative size (Mbp) |
636,930 |
1,383,815 |
398,318,111 |
209,178,556 |
Molecule N50 (kbp) |
121 |
105 |
220,875 |
129,750 |
Link to ENA |
ERZ650363 |
ERZ650363 |
ERZ1091453 |
ERZ1758174 |
Illumina
|
B. oleracea HDEM |
B. rapa Z1 |
B. napus Darmor-bzh |
M. schizocarpa |
M. acuminata Pahang |
A. halleri FC_Auby1 |
Cumulative size |
48,496,210,552 |
38,148,820,161 |
97,017,005,209 |
64,612,770,396 |
78,515,505,026 |
26,200,252,780 |
Number of reads |
105,601,678 |
84,471,135 |
215,472,682 |
128,710,698 |
165,787,848 |
88,256,092 |
Link to ENA |
PRJEB26621 |
PRJEB26620 |
PRJEB39416 |
PRJEB26661 |
PRJEB35002 |
fastq files |