MUSCLE (3.8) multiple sequence alignment HS_haplotype1 AATAGGCAGATTAAAGATAAAGAGCGAGCTGGGATGGTGCCTGCTGAAGTTCCTCTACAG HS_assemblymutate AATAGGCAGATTAAAGATAAAGAGCGAGCTGGGATGGTGCCTGCTGAAGTTCCTCTACAG HS_haplotype2 AATAGGCAGATTAAAGATAAAGAGCGAGCTGGGATGGTGCCTGCTGAAGTTCCTCTACAG ************************************************************ HS_haplotype1 GAACTCCGGACCTAAAAAATGCCGCTCTGTAACCAGATATATTTATAGTTCTAGGTAATA HS_assemblymutate GAACTCCGGACCTAAAAAATGCCGCTCTGTAACCAGATATATTTATAGTTCTAGGTAATA HS_haplotype2 GAACTCCGGACCTAAAAAATGCCGCTCTGTAACCAGATATATTTATAGTTCTAGGTAATA ************************************************************ HS_haplotype1 ATATGCGAGATTAGCCGGGGAATTCTTCTATTATTGGATATTACTACTCATGAAATAAAC HS_assemblymutate ATATGCGAGATTAGCCGGGGAATTCTTCTATTATTGGATATTACTACTCATGAAATAAAC HS_haplotype2 ATATGCGAGATTAGCCGGGGAATTCTTCTATTATTGGATATTACTACTCATGAAATAAAC ************************************************************ HS_haplotype1 ACAGGGCTCAATATCAATGATGCTGACCAGGGCCGGGATGGCATTCAGATGAGGCAGGTT HS_assemblymutate ACAGGGCTCAATATCAATGATGCTGACCAGGGCCGGGATGGCATTCAGATGAGGCAGGTT HS_haplotype2 ACAGGGCTCAATATCAATGATGCTGACCAGGGCCGGGATGGCATTCAGATGAGGCAGGTT ************************************************************ HS_haplotype1 CCATTTTTATGCTGCTTCCTGATTTTGGGATAGAGATGGGGCGCAAAGAGTCGTTGTGGT HS_assemblymutate CCATTTTTATGCTGCTTCCTGATTTTGGGATAGAGATGGGGCGCAAAGAGTCGTTGTGGT HS_haplotype2 CCATTTTTATGCTGCTTCCTGATTTTGGGATAGAGATGGGGCGCAAAGAGTCGTTGTGGT ************************************************************ HS_haplotype1 TCCTTACAGGGAAGTGTGGCCCTCACTACCCTGGGAGGTGCCTTCTTTTTTTTATTGCCC HS_assemblymutate TCCTTACAGGGAAGTGTGGCCCTCACTACCCTGGGAGGTGCCTTCTTTTTTTTATTGCCC HS_haplotype2 TCCTTACAGGGAAGTGTGGCCCTCACTACCCTGGGAGGTGCCTTCTTTTTTTTATTGCCC ************************************************************ HS_haplotype1 AATCCAAGGAAAGTATTTTGTGATGAATCCCGCCTGGGAAAGGTACATTCTTTTGGGGAG HS_assemblymutate AATCCAAGGAAAGTATTTTGTGATGAATCCCGCCTGGGAAAGGTACATTCTTTTGGGGAG HS_haplotype2 AATCCAAGGAAAGTATTTTGTGATGAATCCCGCCTGGGAAAGGTACATTCTTTTGGGGAG ************************************************************ HS_haplotype1 TTATAGAATCAGTTGAAAAGAAAGATTAGATAGACTGTATGACAACTTGGCCCCTCAGGG HS_assemblymutate TTATAGAATCAGTTGAAAAGAAAGATTAGATAGACTGTATGACAACTTGGCCCCTCAGGG HS_haplotype2 TTATAGAATCAGTTGAAAAGAAAGATTAGATAGACTGTATGACAACTTGGCCCCTCAGGG ************************************************************ HS_haplotype1 CCAGGCCGAGTCTCTATCTGGATTCCCCTGCCATGAGTAGCAGGAAATAGGGGCTCTAGA HS_assemblymutate CCAGGCCGAGTCTCTATCTGGATTCCCCTGCCATGAGTAGCAGGAAATAGGGGCTCTAGA HS_haplotype2 CCAGGCCGAGTCTCTATCTGGATTCCCCTGCCATGAGTAGCAGGAAATAGGGGCTCTAGA ************************************************************ HS_haplotype1 GAGGAACTCTGGTCACTACTGAACAGATGTCTGACAAAAATGATTAAAAGACTATGCCCC HS_assemblymutate GAGGAACTCTGGTCACTACTGAACAGATGTCTGACAAAAATGATTAAAAGACTATGCCCC HS_haplotype2 GAGGAACTCTGGTCACTACTGAACAGATGTCTGACAAAAATGATTAAAAGACTATGCCCC ************************************************************ HS_haplotype1 ACCCCACCATGCCTATATTTCGATGGCACATGTAAAAAGTGACCAAGTAATCCCAATTTC HS_assemblymutate ACCCCACCATGCCTATATTTCGATGGCACATGTAAAAAGTGACCAAGTAATCCCAATTTC HS_haplotype2 ACCCCACCATGCCTATATTTCGATGGCACATGTAAAAAGTGACCAAGTAATCCCAATTTC ************************************************************ HS_haplotype1 CAAAACACCTCGGCTCAAGCAGGGCAACATTGCGTGGAGCACTTCAGCTTTATTTTGGTC HS_assemblymutate CAAAACACCTCGGCTCAAGCAGGGCAACATTGCGTGGAGCACTTCAGCTTTATTTTGGTC HS_haplotype2 CAAAACACCTCGGCTCAAGCAGGGCAACATTGCGTGGAGCACTTCAGCTTTATTTTGGTC ************************************************************ HS_haplotype1 CAACCGACTTGTGTGGTTTATTCTTAATATATTTCTGGGGCGCCCATCTCTAGGGCAGCA HS_assemblymutate CAACCGACTTGTGTGGTTTATTCTTAATATATTTCTGGGGCGCCCATCTCTAGGGCAGCA HS_haplotype2 CAACCGACTTGTGTGGTTTATTCTTAATATATTTCTGGGGCGCCCATCTCTAGGGCAGCA ************************************************************ HS_haplotype1 TGGTTAGATTATGCGGAAGTTTATTAAATGAAAGTGACATTCTATTATCAAAAGGGGCCA HS_assemblymutate TGGTTAGATTATGCGGAAGTTTATTAAATGAAAGTGACATTCTATTATCAAAAGGGGCCA HS_haplotype2 TGGTTAGATTATGCGGAAGTTTATTAAATGAAAGTGACATTCTATTATCAAAAGGGGCCA ************************************************************ HS_haplotype1 TTTTATGCTTTTTCAACATAAACTCCAGCTCATAGTCAGAGGACACACATCTGTATTTTC HS_assemblymutate TTTTATGCTTTTTCAACATAAACTCCAGCTCATAGTCAGAGGACACACATCTGTATTTTC HS_haplotype2 TTTTATGCTTTTTCAACATAAACTCCAGCTCATAGTCAGAGGACACACATCTGTATTTTC ************************************************************ HS_haplotype1 AAAATAAAGCAGCCTGAGGCCATTTTTGCTGTGCACTAATTTGTAGTTTTTGGCTCTTCA HS_assemblymutate AAAATAAAGCAGCCTGAGGCCATTTTTGCTGTGCACTAATTTGTAGTTTTTGGCTCTTCA HS_haplotype2 AAAATAAAGCAGCCTGAGGCCATTTTTGCTGTGCACTAATTTGTAGTTTTTGGCTCTTCA ************************************************************ HS_haplotype1 TGGACATGAACGGTGGAGAAAGGGAGGAATCTGCCCTATA-----GATGCCTGTCTTAGG HS_assemblymutate TGGACATGAACGGTGGAGAAAGGGAGGAATCTGCCCTATAGTTTGGATGCCTGTCTTAGG HS_haplotype2 TGGACATGAACGGTGGAGAAAGGGAGGAATCTGCCCTATA-----GATGCCTGTTTTACG **************************************** ********* *** * HS_haplotype1 TATTGGCCTCCTTCTGTCATGTCATGCCCCGCCACAGCCACCCAAATGTCATAGTTGCTG HS_assemblymutate TATTGGCCTCCTTCTGTGATGTCATGCCCCGCCACAGCCACCCAAATGTCATAGTTGCTG HS_haplotype2 TATTGGCCTCCTTCTGTGATGTCATGCCCCGCCACAGCCACCCAAATGTCATAGTTGCTG ***************** ****************************************** HS_haplotype1 GGAGTCCACGGTCAGCTACTTTTTTGTGAGGTGATCTGTGCCAACAGGACATTGTATTTC HS_assemblymutate GGAGTCCACGGTCAGCTACTTTTTTGTGAGGTGATCTGTGCCAACAGGACATTGTATTTC HS_haplotype2 GGAGTCCACGGTCAGCTACTTTTTTGTGAGGTGATCTGTGCCGACAGGACATTGTATTTC ****************************************** ***************** HS_haplotype1 TTCCTATGGTTTTGAATTGGCCAAGGACATACTCTTCTGCCTCCCTGACTTCCCTGCACT HS_assemblymutate TTCCTATGGTTTTGAATTGGCCAAGGACATACTCTTCTGCCTCCCTGACTTCCCTGCACT HS_haplotype2 TTCCTATGGTTTTGAATTGGCTAAGGACAAACTCTTCTGCCTCCCTGACTTCCCTGCACT ********************* ******* ****************************** HS_haplotype1 CCACAACTCTTTGAGTAGGAGTCAACAGAAGTATCATATTCTAAGACTAATTTGCATTCC HS_assemblymutate CCACAAATCTTTGAGTAGGAGTCAACAGAAGTATCATATTCTAAGACTAATTTGCATTCC HS_haplotype2 CCACAAATCTTTGAGTAGGAGTCAACAGAAGTATCATATTCTAAGACTAATTTGCATTCC ****** ***************************************************** HS_haplotype1 TGAGTGAATATATGCTCTGCCCCTCCCTGTAGCTTGAACACTTTCCTAATTTGAGAGGAT HS_assemblymutate TGGGTGAATATATCCTCGGCCCCTCCCTGTAGCTTGAACACTTTCCTAATTTGAGAGGAT HS_haplotype2 TGGGTGAATATATCCTCGGCCCCTCCCTGTAGCTTGAACACTTTCCTAATTTGAGAGGAT ** ********** *** ****************************************** HS_haplotype1 GTTGACATCTCTGATCAAAATATCAACCTTCGGCCAGGGCAAACTCCATTTAAAAACTAT HS_assemblymutate GTTGACATCTCTGATCAAAATGTCAACCTTCGGCCAGGGCAAACTCCATTTAAAAACTAT HS_haplotype2 GTTGACATCTCTGATCAAAATGTCAACCTTCGGCCAGGGCAAACTCCATTTAAAAACTAT ********************* ************************************** HS_haplotype1 TGCCTCCCAGCAGTGCTGGACTACACGATAAACCTAGGCATTCTGGACGGGGCCGCGGCT HS_assemblymutate TGCCTCCCAGCAGTGCTGGACTACTCGATAAACCTAGGCATTCTGGACGGGGCCGCGGCG HS_haplotype2 TGCCTCCCAGCAGTGCTGGACTACTCGATAAACCTAGGCATTCTGGACGGGGCCGCGGCG ************************ ********************************** HS_haplotype1 AATTAAAAACAATTCAGCCACCCAAACAAATGCAAAAACAAAAGTTTAGGCCTAGGCAGC HS_assemblymutate AATTAAAAACAATTCAGCCACCCAAACAAATGCAAAAACAAAAGTTTAGGCCTAGGCAGC HS_haplotype2 AATTAAAAACAATTCAGCCACCCAAACAAATGCAAAAACAAAAGTTTAGGCCTAGGCAGC ************************************************************ HS_haplotype1 TGGAGGTCAGTTTACTGAACTATGAAATGAGGACAGTCTCTAATTTTCACCTGTGTGATA HS_assemblymutate TGGAGGTCAGTTTACTGAACTATGAAATGAGGACAGTCTCTAGTTTTCACCTGTGTGATA HS_haplotype2 TGGAGGTCAGTTTACTGAACTATGAAATGAGGACAGTCTCTAGTTTTCACCTGTGTGATA ****************************************** ***************** HS_haplotype1 AGGGGCCCAGCTACCTGTGTGTGCATTGTGATTTATTTTTGCATTGCACCGGAACTGACT HS_assemblymutate AGGGGCCCAGCTACCTGTGTGTGCATTGTGATTTATTTTTGCATTGCACCGGAACTGACT HS_haplotype2 AGGGGCCCAGCTACCTGTGTGTGCATTGTGATTTATTTTTGCATTGCACCGGAACTGACT ************************************************************ HS_haplotype1 GTATCTGGAATACTCTCTCAGCTGACAGCAGCCTCTATTGTCTAACAACCCAGGTGCAAT HS_assemblymutate GTATCTGGAATACTCTCTCAGCTGACAGCAGCCTCTATTGTCTAACAACCCAGGTGCAAT HS_haplotype2 GTATCTGGAATACTCTCTCAGCTGACAGCAGCCTCTGTTGTCTAACAACCCAGGTGCAAT ************************************ *********************** HS_haplotype1 CAGAGTCAGGTGACCAGCAGTTTGTCTGGATCGATTCTCAACGTATCAGCTCTTAGTTTC HS_assemblymutate CAGAGTCAGGTGACCAGCAGTTTGTCTGGATCGATTCTCAACGTATCAGCTCTTAGTTTC HS_haplotype2 CAGAGTCAGGTGACCAGCAGTTTGTCTGGATCGATTCTCAACGTATCAGCTCTTAGTTTC ************************************************************ HS_haplotype1 ATACCTTTCCTCAGGACTGTGTTTCATGCGCTGTTTCTAGAAACACCAGCCCTGGGATCA HS_assemblymutate ATACCTTTCCTCAGGACTGTGTTTCATGCGCTGTTTCTAGAAACACCAGCCCTGGTATCA HS_haplotype2 ATACCTTTCCTCAGGACTGTGTTTCATCCGCTGTTTCTAGAAACACCAGCCCTGGTATCA *************************** *************************** **** HS_haplotype1 CAGTACGAGCCACCACCTAGGTCTAGACATGACCAAAACCAACTTAGAAAATATTTGAGA HS_assemblymutate AAGTACCAGCCACCACCTAGGTCTAGACATGACCAAGACCAACTTAGAAAATATTTGAGA HS_haplotype2 AAGTACCAGCCACCACCTAGGTCTAGACATGACCAAGACCAACTTAGAAAATATTTGAGA ***** ***************************** *********************** HS_haplotype1 CAGGACTGAATGGTGAGACAGGCAGGGGGATTTAATCCCGGTGGGATAGCCTACAATAGT HS_assemblymutate CAGGACTGAATGGTGAGACAGGCAGGGGGATTTAATCCCGGTGGGATAGCCTACAATAGT HS_haplotype2 CAGGACTGAATGGTGAGACAGGCAGGGGGATTTAATCCCGGTGGGATAGCCTACAATAGT ************************************************************ HS_haplotype1 TTTATCCAAGGAAATCTGTTCTTTCCCAATCAAATTTTCAGTATTTGTCATCACCTGAGT HS_assemblymutate TTTATCCAAGGAAATCTGTTCTTTCCCAATCAAATTTTCAGTATTTGTCATCACCTGAGT HS_haplotype2 TTTATCCAAGGAAATCTGTTCTTTCCCAATCAAATTTTCAGTATTTGTCATCAACTGAGT ***************************************************** ****** HS_haplotype1 CATTCGAGATGGGGATCCATGCCAACCCCTAAGGTCAGATGGGTCACCTCTCTGCAGGCA HS_assemblymutate CATTCGAGATGGGGATCCATGCCAACCCCTAAGGTCAGATGGGTCACCTCTCTGCAGGCA HS_haplotype2 CATTCGAGATGGGGATCCATGCCAACCCCTAAGGACAGATGGGTCACCTCTCTGCAGGCA ********************************** ************************* HS_haplotype1 TGGATGAAATATAAAAGAAACTGAGGTTGAATTAAGGAATGCCCTCCTCTGCATTTACTA HS_assemblymutate TGGATGAAATATAAAAGAAACTGAGGTTGAATTAAGGAATGCCCTCCTCTGCATTTACTA HS_haplotype2 TGGATGAACTATAAAAGAAACTGAGGTTGAATTAAGGAATGCTCTCCTCTGCATTTACTA ******** ********************************* ***************** HS_haplotype1 ATTTCATCCTACTCTGTCTTGGAGGAATAGAAAAACTCCTAGTTGGACAACAGATTTTAG HS_assemblymutate ATTTCATCCTACTCTGTCTTGGAGGAATAGAAAAACTCCTAGTTGGACAACAGATTTTAG HS_haplotype2 ATTTCATCCTACTCTGGCTAGGAGGAATAGAAAAACTCCTAGGTGGACAACAGATTTTAG **************** ** ********************** ***************** HS_haplotype1 TAGAAGATACACTCCTAGGTCCCAGGAGTGCAGTGCAATCCCAGGCTGCACAAATCTATC HS_assemblymutate TAGAAGATACACTCCTAGGTCCCAGGAGTGCAGTGCAATCCCAGGCTGCACAAATCTATC HS_haplotype2 TAGAAGATACACTCCTAGGTCCCAGGAGTGCAGTGCAATCCCAGGCTGCACAAATCTATC ************************************************************ HS_haplotype1 AAGCGGGGTTTTCATCCCCGAGAAATAAGACTAATTGGTCCCTGGAATGCTGGGCAGATC HS_assemblymutate AAGCGGGGTTTTCATCCCCGAGAAATAAGACTAATTGGTCCCTGGAATGCTGGGCAGATC HS_haplotype2 AAGCAGGGTTTTCATCCCCGAGAAATAAGGCTAATTGATCCCTGGAATGCTGGGCGGATC **** ************************ ******* ***************** **** HS_haplotype1 GCGATCTGCCCATGCTAATGGAGAAGAAAGTATTTGGCTTGGGCAAGGTACCTGAGGAGG HS_assemblymutate GCGATCTGCCCATGCTAATGGAGAAGAAAGTATTTGGCTTGGGCAAGGTACCTGAGGAGG HS_haplotype2 GCGATCTGCCCATGCTTATGGAGAAGAAAGTATTTGGCTTGGGCCATGTACCTGAGGAGG **************** *************************** * ************* HS_haplotype1 AGCTATCAAACATCTTAGATCGTCTCGGCTAAGTTGGCAAGGCTGACAAGATACTAGAGC HS_assemblymutate AGCTATCAAACATCTTAGATCGTCTCGGCTAAGTTGGCAAGGCTGACAAGATACTAGAGC HS_haplotype2 AGCTATCAAACATCTTGGATCGTCTCGGCTAAGTTGGCAAGGCTGACAAGATACTTGAGC **************** ************************************** **** HS_haplotype1 TTTTCTCACTATTACTTTCCAGAAATTAATCTTCCCTAGCCGGCTCAAGACCTCTATTGT HS_assemblymutate TTTTCTCACTATTACTTTCCAGAAATTAATCTTCCCTAGCCGGCTCAAGACCTCTATTGT HS_haplotype2 TTTTCTCACTATTACTTTCCAGAAATTAATCTTCCCTAGCCGGCTCAAGACCTCTATTGT ************************************************************ HS_haplotype1 GGTGGTGCGCGAGTAGTCCCTTCCTCTCTGTCATCCCAATCATGGATTTGTTTCCAGTTC HS_assemblymutate GGTGGTGCGCGAGTAGTCCCTTCCTCTCTGTCACCCCAATCATGGATTTGTTTCCAGTTC HS_haplotype2 GGTGGTGCGCGAGTAGTCCCTTCCTCTCTGTCACCCCAATCATGGATTTGTTTGCAGTTC ********************************* ******************* ****** HS_haplotype1 AAGACTTAGCAGGCTGGTTCTGAGCATATGGTGGTGTGTGATACTATATTTCTCATAACT HS_assemblymutate AAGACTTAGCAGGCTGGTTCTGAGCATATGGTGGTGTGTGATACTATATTTCTCATAACT HS_haplotype2 AAGACTTAGCAGGCTGGGTCTGAGCATATGGTGGTGTGTGATACTATATTTCTCATAACT ***************** ****************************************** HS_haplotype1 TGAATTAGGGATGATTGGCAAGCAGCACTTAAGATGCGGATCAAGGAAAGTGAGGGGCAG HS_assemblymutate TGAATTAGGGATGATTGGCAAGCAGCACTTAAGATGCGGATCAAGGAAAGTGAGGGGCAG HS_haplotype2 TGAATTAGGGATGATTGGCAAGCAGCACTTAAGATGCGGATCAAGGAAAGTGAGGGGCAG ************************************************************ HS_haplotype1 GACAAATTTGCATTGTCTGGGGAGAGCCTACCTTCGTTGTCCCCGAGGAGATCCTAGGAG HS_assemblymutate GACAAATTTGCATTGTCTGGGGAGAGCCTACCTTCGTTGTCCCCGAGGAGATCCTAGGAG HS_haplotype2 GACACATTTGCATTGTCTGGGGAGAGCCTACCTTCGTTGTCCCCGAGGAGATCCTAGGAG **** ******************************************************* HS_haplotype1 GATGAAGAGAGGTCGGCTGCCACATATTTGCCCAGGGAATTTCAATGGGAGGGCGTGGTA HS_assemblymutate GATGAAGAGAGGTCGGCTGCCACATATCTGCCCAGGGAATTTCAATGGGAGGGCATGGTA HS_haplotype2 GATGAAGAGAGGTCGGCTGCCACATATCTGCCCAGGGAATTTCAATGGGAGGGCATGGTA *************************** ************************** ***** HS_haplotype1 GGCGGAAGAAGGCACCTCTGGTCTAGCGTTTTAAAACAGAATCGCTGTTCCCCAGGGTCC HS_assemblymutate GGCGGAAGAAGGCACCTCTGGTCTAACGTTTTAAAACAGAATCGCACCTCCCCAGGGTCC HS_haplotype2 GGCGGAAGAAGGCACCTCTGGTCTAACGTTTTAAAACAGAATCGCACCTCCCCAGGGTCC ************************* ******************* ************ HS_haplotype1 TAGCCAAGCATGAATATTTGCTGCCACAACCAAGGCTCAAGACTCTGAATTGACTCTCGA HS_assemblymutate TAGCCAAGCATGAATATTTGCTGCCACAACCAAGGCTCAAGACTCTGAATTGACTCTCGA HS_haplotype2 TAGCCAAGCATGAATATTTGCTGCCACAACCAAGGCTCAAGACTCTGAATTGACTCTCGA ************************************************************ HS_haplotype1 CCAGCGCATATATTTCAAATTATCTTAGGGGCACAGTTTATTCAGAGTAATTTCTTTTCT HS_assemblymutate CCAGCGCATATATTTCAAATTATCTTAGGGGCACAGTTTATTCAGAGTAATTTCTTTTCT HS_haplotype2 CCAGCGCATATATTTCAAATTATCTTAGGGGCACAGTTTATTCAGAGTAATTTCTTTTCT ************************************************************ HS_haplotype1 GTATAGGTAATCTCAGAACTGATGCTGAGGGGGGAAACATGAAGGTGACTTTGAGTACAA HS_assemblymutate GTATAGGTAATCTCAGAACTGATGCTGAGGGGGGAAACATGAAGGTGACTTTGAGTACAA HS_haplotype2 GTATAGGTAATCTCAGAACTGATGCTGAGGGGGGAAACATGAAGGTGACTTTGAGTACAA ************************************************************ HS_haplotype1 ATTTAAAGAAATGTGGACCAGGGAGCTAATCGATGTGAGACTCTAGGAGAGGGGTCTCCA HS_assemblymutate ATTTAAAGAAATGTGGACCAGGGAGCTAATCGACGTGAGACTCTAGGAGAGGGGTCTCCA HS_haplotype2 ATTTAAAGAAATGTGGACCAGGGAGCTAATCGACGTGAGACTCTAGGAGAGGGGTCTCCA ********************************* ************************** HS_haplotype1 TTAGAGACAGGAGATGTTTTAGAGGCCCAGCTAACTAAGGAGCAGAAAGAGTTGAGGTTT HS_assemblymutate TTAGAGACAGGAGATGTTTTAGAGGCCCAGCTAACTAAGGAGCAGAAAGAGTTGAGGTTT HS_haplotype2 TTAGAGACAGGAGATGTTTTAGAGGCCCAGCTAACTAAGGAGCAGAAAGAGTTGAGGTTT ************************************************************ HS_haplotype1 AGCTACGCGTGAGCGATTTTTCTCCTGGAGAGCAGTGGGAACTCAGACCACGGGAGGCCG HS_assemblymutate AGCTACGCGTGAGCGATTTTTCTCCTGGAGAGCAGTGGGAACTCAGACCACGGGAGGCCG HS_haplotype2 AGCTACGCGTGAGCGATTTTTCTCCTGGAGAGCAGTGGGAACTCAGACCACGGGAGGCCG ************************************************************ HS_haplotype1 GAGCATTATTAATTTTTTCTGTAAGTGCTGACTTCATAAAGATAAATTATTATCCGCCTA HS_assemblymutate GAGCATTATTAATTTTTTCTGTAAGTGCTGACTTCATAAAGATAAATTATTATCCGCCTA HS_haplotype2 GAGCATTATTAATTTTTTCTGTAAGTGCTGACTTCATAAAGATAAATTATTATCCGCCTA ************************************************************ HS_haplotype1 CAGGCTGGAGAATGTTTGGATATTATGTCATCTCTAACCTCCCACAGAAGTAGATTGCCC HS_assemblymutate CAGGCTGGAGAATGTTTGGATATTATGTCATCTCTAACCTCCCACAGAAGTAGATTGCCC HS_haplotype2 CAGGCTGGAGAATGTTTGGAAATTATGTCATCTCTAACCTCCCACAGAAGTAGATTGCCC ******************** *************************************** HS_haplotype1 ACCCCGGATTGCTTTATTACACCTGTGTGGGAGAAAGGGACACTGCCTTCCTAGGATGAG HS_assemblymutate ACCCCGGATTGCCTTATTACACCTGTGTGGGAGAAAGGGACACTGCCTTCCTAGGATGAG HS_haplotype2 ACCCAGGATTGCCTTATTACACCTGTGTGGGAGAAAGGGACACTGCCTTCCTAGGATGAG **** ******* *********************************************** HS_haplotype1 TCCAAGAAAAAATGGGCATTTAAGTCCCACCACGTTAGTAGAAATAAACCTTTGGAGTGC HS_assemblymutate TCCAAGAAAAAATGGGCATTTAAGTCCCACCACGTTAGTAGAAATAAACCTTTGGAGTGC HS_haplotype2 TCCAAGAAAAAATGGGCATTTAAGACCCACCACGTTAGTAGAAATAAACCTTTGGAGTGC ************************ *********************************** HS_haplotype1 TACTCCCAAGCTGTGGACAGGTCACTGAGAGGTATATGTTTTAACTGCAAACTTGTATTA HS_assemblymutate TACTCCCAAGCTGTGGACAGGTCACTGAGAGGTATATGTTTTAACTGCAATCTTGTATTA HS_haplotype2 TACTCCCAAGCTGTGGACAGGTCACTGAGAGGTATATGTTTTAACTGCAATCTTGTATTA ************************************************** ********* HS_haplotype1 ATTGGGTGACTGACTTGAGGCTGTCACTGTAAATCAGTCTCGGCTGGCTAGGAGGTCCAG HS_assemblymutate ATCGGGTGACTGACTTGAGGCTGTCACTTTAAATCAGTCTCGGCTGGCTAGGAGGTCCAG HS_haplotype2 ATCGGGTGACTGACTTGAGGCTGTCACTTTAAATCAGTCTCGGCTGGCTAGGAGGTCCAG ** ************************* ******************************* HS_haplotype1 GAACGTGCCCTCCTTCGGGTGAGCTTGGGTCACTACTACAGGAAGAATGAGTATAAATTG HS_assemblymutate GAACGTGCCCTCCTTCGGGTGACCTTGGGACACTACTACAGGAAGAATGAGTATAAATTG HS_haplotype2 GAACGTGCCCTCCTTCGGGTGACCTTGGGACACTACTACAGGAAGAATGAGTATAAATTG ********************** ****** ****************************** HS_haplotype1 CTGAGTTTCATGGATCTGACTTCAGGTGCTGACAGAGTGCGTTGCTAGTATATGGGGTGA HS_assemblymutate CTGAGTTTCATGGATTTCACTTCAGGTGCTGACAGAGTGCGTTGCTAGTATATGGGGTGA HS_haplotype2 CTGAGTTTCATGGATTTCACTTCAGGTGCTGACAGAGTGCGTTGCTAGTATATGGGGTGA *************** * ****************************************** HS_haplotype1 GGCGATTCTTCTCGGGGGAGTAGGTCAGCCCTATAGGAAGTTTGAAGGGCCCCCTGCCTG HS_assemblymutate GGCGATTCTTCCCGGGGGAGTAGGTCAGCCCTATAGGAAGTTTGAAGGGCCCCCTGCCTG HS_haplotype2 GGCGATTCTTCCCGGGGGAGTAGGTCAGCCCTATAGGAAGTTTGAAGGGCCCCCTGCCTG *********** ************************************************ HS_haplotype1 TCTTGTAAATTCTTCTCCCCGTCTACCACGGGTTTTGAACTGATGCGCTCAGTACTCAGA HS_assemblymutate TCTTGTAAATTCTTCACCCCTTCTACCACGGGTTTTGAACTGATGGGCTCAGTACTCAGA HS_haplotype2 TCTTGTAAATTCTTCACCCCTTCTACCACGGGTTTTGAACTGATGGGCTCAGTACTCAGA *************** **** ************************ ************** HS_haplotype1 TGGCTAGATGTTTAAACACCACATTTCTTGCCTCAATAACTGGTCAGGGGTAGTGGAGAG HS_assemblymutate TGGCAAGGTGTTTAAACACCACATTTCTTGCCTCAATTACTGGTCTGGGGTAGTGGAGAG HS_haplotype2 TGGCAAGGTGTTTAAACACCACATTTCTTGCCTCAATTACTGGTCTGGGGTAGTGGAGAG **** ** ***************************** ******* ************** HS_haplotype1 GGTTTGTCTCACAGCATCCTAAGGGTGTCTCAGGAAATAAAAATTACAGAGCAGAATTAA HS_assemblymutate GGTTTGTCTCACAGCATCCTAAGGGTGTCTCAGGAAATAAAAATTACAGAGCAGAATTAA HS_haplotype2 GGTTTGTCTCACAGCATCCTAAGGGTGTCTCAGGAAATAAAAATTACAGAGCAGAATTAA ************************************************************ HS_haplotype1 ACAGATGAACCCTATGCCATTCTTATACATGAGCAGCGTGCCGCAGTGCTGAGCTTGGTA HS_assemblymutate ACGGATGAACCCTATGCCATTCTTATACAAGAGCAGCGTGCCGCAGTGCTGAGCTTGGTA HS_haplotype2 ACGGATGAACCCTATGCCATTCTTATACAAGAGCAGCGTGCCGCAGTGCTGAGCTTGGTA ** ************************** ****************************** HS_haplotype1 GGAGACGATGGAAAGTAGAGTTTTTAAATACCTGGAATATTTTTTGTCTGTATCTGTTAA HS_assemblymutate GGAGACGATGGAAAGTAGAGTTTTTAAATACCTGGAATATCTTTTGTCTGTATCTGTTAA HS_haplotype2 GGAGACGATGGAAAGTAGAGTTTTTAAATACCTGGAATATCTTTTGTCTGTATCTGTTAA **************************************** ******************* HS_haplotype1 CTTCAGGCAAATCAAAAAACATGGGGAACTCCACGGTACCTCACAGGTTCTCCCAGTGTC HS_assemblymutate CTTCAGGCAAATCAAAAAACATGGGGAACTCCACGGTACCTCACAGGTTCTCCCAGTGTC HS_haplotype2 CTTCAGGCAAATCAAAAAACATGGGGAACTCCACGGTACCTCACAGGTTCTCCCAGTGTC ************************************************************ HS_haplotype1 CATACACTAGAGGCCTGGTGGACTACCTCCCCATCTTTTTTGGGCCGACTGGGGTCAGCC HS_assemblymutate CATACACTAGAGGCCTGGTGGACTACCTCCCCATCTTTTTTGGGCCGACTGGGGTCAGCC HS_haplotype2 CATACACTAGAGGCCTGGTGGACTACCTCCCCATCTTTTTTGGGCCGACTGGGGTCAGCC ************************************************************ HS_haplotype1 TGATGTGCCTTAGTTAGCTATAATAGGAGCAGCTACTCATTTGACACATGATTAAACGAA HS_assemblymutate TGATGTGCCTTAGTTAGCTATAATAGGAGCAGCTACTCATTTGACACATGATTAAACGAA HS_haplotype2 TGATGTGCCTTAGTTAGCTATAATAGGAGCTGCTACTCATTTGACACATGTTTAAACGAA ****************************** ******************* ********* HS_haplotype1 TGCATAGACCCCCATTTCAACTCAGGTGGCTAATATGGTAAACCTATTTGTATGACCTTG HS_assemblymutate TGCATAGACCCCCATTTCAACTCAGGTGGCTAATATGGTTAACCTATTTGTATGACCTTG HS_haplotype2 TGCATAGACCCCCATTTCAACTCAGGTGGCTAATATGGTTAACCTATTTGTATGACCTGG *************************************** ****************** * HS_haplotype1 GTTTGTCCCACTGCAAACGGTTACAGATGGGCTGTGTTGCATGTCTAGCCCAAACTGTAA HS_assemblymutate GTTTGTCCCCCTGCAAACAGTTACAGATGGGCTGTGTTGCATGTCTAGCCCAAACTGTAA HS_haplotype2 GTTTGTCCCCCTGCAAACAGTTACAGATGGGCTGTGTTGCATGTCTAGCCCAAACTGTAA ********* ******** ***************************************** HS_haplotype1 TGAGTGTGGGTCTCCTGTCCAGACAGATGTTCCCTTTGGTGCAGTGCCCACCAGTTCCCG HS_assemblymutate TGAGTGTGGGTCTCCTGTCCAGACAGATGTTCCCTTTGGTGCAGTGCCCATCAGTTCCCG HS_haplotype2 TGAGTGTGGGTCTCCTGTCCAGACAGATGTTCCCTTTGGTGCAGTGCCCATCAGTTCCCG ************************************************** ********* HS_haplotype1 AGTATCTAAAAAATGTCTCACACTCTCTTCAAAAAGAGACCACATGGGCTCAGCTAGAGA HS_assemblymutate AGTATCTAAAAAATGTCTCACACTCTCTTCAAAAAGAGACCACATGGGCTCAGCTAGAGA HS_haplotype2 AGTATCTAAAAAATGTCTCACACTTTCCTCAAAAAGAGACCACATGGGCTCAGCTAGAGA ************************ ** ******************************** HS_haplotype1 GTACTCAAAGTATTATAATGGCCCAAATAAGCATACAGGAGGCAACAGACAGGGGTTAGC HS_assemblymutate GTACTCAAAGTATTATAATGGCCCAAATAAGCATACAGGAGGCAACAGACAGGGGTTAGC HS_haplotype2 GTACTCAAAGTATTATAATGGCCCAAATAAGCATACAGGAGGCAACAGAAAGGGGTTAGC ************************************************* ********** HS_haplotype1 CGCA----------TGTGGGAGGTAATATACTACTTGCCTCTTCATTTAAACATATGAGA HS_assemblymutate CGCATGCTAACCCCTGTGGGAGGTAATATACTATTTGCCTCTTCATTTAAACATATGATA HS_haplotype2 CGCA----------TGTGGGAGGTAATATACTATTTGCCTCTTCATTTAAACATATGATA **** ******************* ************************ * HS_haplotype1 TCTTGGTAAGTCTATTATCAAGTATCTAGCTAATGCCACTGAATTTTAGCCAAATGAAAA HS_assemblymutate TCTTGGTAAGTCTATTATCAAGTATCTAGCTAATGCCACTGAATTTTAGCCAAATGAAAA HS_haplotype2 TCTTGGTAAGTCTATTACCAAGTATCTAGCTAATGCCACTGAATTTTAGCCAAATGAAAA ***************** ****************************************** HS_haplotype1 CATTTTCCCTTCCCATGTGGCGCTCTGCAGCTTCCAACCAGAGGAGTTCTGATGGCAGGA HS_assemblymutate CATTTTCCCTTCCCATGTGGCGCTCTGCAGCTTCCAACCAGAGGAGTTCTGATGGCAGGA HS_haplotype2 CATTTTCCCTTCCCATGTGGCGCTCTGTAGCTTCCAACCAGAGGAGTTCTGATGGCAGGA *************************** ******************************** HS_haplotype1 GAAGAGTAGACTGAGCCTCACCTTAGAACGACTTTCTCAATTCTCCCTGACGCCCTAACA HS_assemblymutate GAAGAGTAGACTGAGCCTCACCTTAGAACCACTTTCTCAATTCTCCCTGACGCCCTAACA HS_haplotype2 GAAGAGTAGACTGAGCCTCACCTTAGAACCACTTTCTCAATTCTCCCTGACGCCCTAACA ***************************** ****************************** HS_haplotype1 TGTGGGTGAGGCTTTATTAGATTATTTCAGTTCACCCACAGGCAGCAGGTCACAGCTTGC HS_assemblymutate TGTGGGTGAGCCTTTATTAGATTATTTCAGTTCACCCACAGGCAGCAGGTCACAGCTTGC HS_haplotype2 TGTGGGTGAGCCTTTATTAGATTATTTCAGTTCACCCACAGGCAGCAGGTCACAGCTTGC ********** ************************************************* HS_haplotype1 GCTGGGAACTTAGCCTGATATAAGGAAACCGGAGAGGTCGGCCCTGCCTCTTTGCAAGAA HS_assemblymutate TCTGGGAACTTAGCCTGATATAAGGAAACCGGAGAGGTCGGCCCTGCCTCTTTGCAAGAA HS_haplotype2 TCTGGGAACTTAGCCTGATATAAGGAAACCGGAGAGGTCGGCCCTGCCTCTTTGCAAGAA *********************************************************** HS_haplotype1 ATGTTCCATTTTATTGCTATGAATCAAAATTATAATTTTCAGCTTGGGGACTTTTCCCAA HS_assemblymutate ATGTTCCATTTTATTGCTATGAATCAAAATTATAATTTTCAGCTTGGGGACTTTTCCCAA HS_haplotype2 ATGTTCCATTTTATTGCTATGAATCAAAATTATAATTTTCAGCTTGGGGACTTTTCCCAA ************************************************************ HS_haplotype1 ATGAATGGACAGATTAAATTGTACGTGCCCGGCCTTGCGCCTGTATTGTAACGGGGCAAT HS_assemblymutate ATGAATGGACAGATTAAATTGTACGTGCCCGGCCTTGCGCCTGTATTGTAACGGGGCAAT HS_haplotype2 ATGAATGGACAGATTAAATTGTACGTGCCCGGCCTTGCGCCTGTATTGTAACGGGGCAAT ************************************************************ HS_haplotype1 TAGGCCACCCCAGGCTTATTGACTTCTGTCTCTTA--CTGACTAGTCTTTACCAAGACCT HS_assemblymutate TAGGCCACCCCAGGCTTATTGACTTCTGTCTCTTACCCTGACTAGTCTTTACCAAGACCT HS_haplotype2 TAGGCCACCCCAGGCTTATTGACTTCTGTCTCTTA--CTGACTAGTCTTTACCAAGACCT *********************************** *********************** HS_haplotype1 ACAGTGCATAGTAAGTACCATCTGTATGGAAGGAGGCGTGATTTTTGAGCTGTGTAAAAT HS_assemblymutate ACAGTGCATAGTAAGTACCATCTGTATGGAAGGAGGCGTGATTTTTGAGCTGTGTAAAAT HS_haplotype2 ACAGTGCCTAGTAAGTACCATCTGTATGGAAGGAGGCGTGATTTTTGAGCTGTGTAAAAT ******* **************************************************** HS_haplotype1 TTCATTGCCTGAAGAGAGCCAAAGTGCTGAGGTCAAAGGGAGGCTGGGTGCTCGGGGTAT HS_assemblymutate TTCATTGCCTGAAGAGAGCCAAAGTGCTGAGGCCAAAGGGAGGCTGGGTGCTCGGGGTAT HS_haplotype2 TTCATTGCCTGAAGAGAGCCAAAGTGCTGAGGCCAAAGGGAGGCTGGGTGCTCGGGGTAT ******************************** *************************** HS_haplotype1 AGACACAATGAGTCGAGCGATTTAGCCATAATTCTCTACATATGAGTCTGTGGGTGATTG HS_assemblymutate AGACACAATGAATAGAGCGATTTAGCTATAATTCTCTACATATGAGTCTGTGGGTGATTG HS_haplotype2 AGACACAATGAATAGAGCGATTTAGCTATAATTCTCTACATATGAGTCTGTGGGTGATTG *********** * ************ ********************************* HS_haplotype1 TGCCAAAGGGGTTCAATGGGGACTAACCAAGAGGGGGTGCCCTGTCCTAGATAATTTTAT HS_assemblymutate TGCCAAAGGGGTTCAATGGGGACTAACCAAGAGGGGGTGCCCTGTCCTAGATAATTTTAT HS_haplotype2 TGCCAAAGGGGTTCAATGGGGGCTAACCAAGAGGGGGTGCCCTGTCCTAGATAATTTTAT ********************* ************************************** HS_haplotype1 CTTCTTAAACAAATTATCTTTGAATTTTCTATTCACTTGCTTGTTCAAACCATTATTGTG HS_assemblymutate CTTCTTAAACAAATTATCTTTGAATTTTCTATTCACTTGCTTGTTCAAACCATTATTGTG HS_haplotype2 CATCTTAAAAAAATTATCTTTGAATTTTCTATACACTTGCTTGTTCAAACCATCATTGTG * ******* ********************** ******************** ****** HS_haplotype1 GCCAGTTGAGACATAAATACTCTAACAAGGCAGGAGGAAGCAGTGACATGGGTGAGACCT HS_assemblymutate GCCAGTTGAGACATAAATACTCTAACAAGGCAGGAGGAAGCAGTGACATGGGTGAGACCT HS_haplotype2 GCCAGTTGAGACATAAATACTCTAATAAGGCAGGAGGAAGCAGTGAGATGGGGGAGACCT ************************* ******************** ***** ******* HS_haplotype1 ACCTTGCCATATAGTAGACTGGTAAGGTTCTTATATGCGCGGCTCACATTTCCTGTAAAG HS_assemblymutate ACCTTGCCATATAGTAGACTGGTAAGGTTCTTATATGCGCGGCTCACATTTCCTGTAAAG HS_haplotype2 ACCTTGCCATATAGTAGACTGGTAAGGTTCTTATATGCGCGGCTCACATTTCCTGTAAAG ************************************************************ HS_haplotype1 AAAAATTGAATTAAGTCACAAAATATGTTCTGCGCTGGCAATCTCTGGAGGGGACCATCA HS_assemblymutate AAAAATTGAATTAAGTCACAAAATATGTTCTGTGCTGGCAATCTCTGGAGGGGACCATCA HS_haplotype2 AAAAATTGAATTAAGTCACAAAATATGTTCTGTGCTGGCACTCTCTGGAGGGGACCATCA ******************************** ******* ******************* HS_haplotype1 GTGAGTGAAAACATTAAGGAATGCCTGTAATGTGCTATAGTTTGTAACCCAGAGCTACGT HS_assemblymutate GTGAGTGAAAACATTAAGGAATGCCTGTAATGTGCTATAGTTTGTAACCCAGAGCGACGT HS_haplotype2 GTGGGTGAAAACATTAAGGAATGCCTGTAATGTGCTATAGTTTGTAACCCAGAGCGACGT *** *************************************************** **** HS_haplotype1 GGGAGAGGGAGTTCTAGATGTGGGTCTGTGCATTCCATGCTTGGAGTAAATATAGAACTA HS_assemblymutate GGGACAGGGAGTTCTAGATGTGGGTCTGTGCGTTCCATACTAGGAGTATATATAGAACTA HS_haplotype2 GGGACAGGGAGTTCTAGATGTGGGTCTGTGCGTTCCATACTAGGAGTATATATAGAACTA **** ************************** ****** ** ****** *********** HS_haplotype1 TGCAAGAAGTGAATACAAAGTGAGAGGGAAATAAATCGTCGCTTAAAGAAAGTCAGGGCA HS_assemblymutate TGCAAGAAGTGAATACAAAGTGGGAGGGAAATAAATCGTCGCTTAAAGAGAGTCAGGGCA HS_haplotype2 TGCAAGAAGTGAATACAAAGTGGGAGGGAAATAAATCGTCGCTTAAAGAGAGTCAGGGCA ********************** ************************** ********** HS_haplotype1 GGACTGTGTCACCCAACGAGATCACCCTTGAGATCCCCTTGGGAAGATAATAGAAATTCT HS_assemblymutate GGACTGTGTCACCCAACGAGATCACCCTTGAGATCCCCTTGGGAAGATAATAGAAATTCT HS_haplotype2 GGACTGTGTCACCCAACGAGATCACCCTTGAGATCCCCTTGGGAAGATAATAGAAATTCT ************************************************************ HS_haplotype1 GCAATCGCTCAATTTTGAATTGCTCAATTAAAATCTTACTGCAGATGTTAATACCGCCAC HS_assemblymutate GCAATCGCTCAATTTTGAATTGCTCAATTAAAATCTTACTGCAGATGTTAATACCGCCAC HS_haplotype2 GCAGTCGCACAATTTTGAATTGCTCAACTAAAATCTTACTGCAGATGTTAATACCGCCAC *** **** ****************** ******************************** HS_haplotype1 AAAATACATTTGACAGATCATCAGGTGATATGAATTGTTTTATAAATAATTTTCACAGTT HS_assemblymutate AAAATACATTTGACAGATCATCAGGTGATATGAATTGTTTTATAAATAATTTTCACAGTT HS_haplotype2 AAAATACATTTGACAGATCATCAGGTGATATGAATTGTTATATAAATAATTTTCACAGTT *************************************** ******************** HS_haplotype1 TTCCTCCTGAGTGAAGCAGTACCTAGTGAAGAATAAAGTGAAGTGAATACAGGCAATTGC HS_assemblymutate TTCCTCCTGAGTGAAGCAGTACCTAGTGAAGAATAAAGTGAAGTGAATACAGGCAATTGC HS_haplotype2 TTCCTCCTGAGTGAAGCAGTACCTAGTGAAGAATAAAGTGAAGTGAATACAGGCAATTGC ************************************************************ HS_haplotype1 CTCCTGGTGGTGCAGCTCAGCGACAGATATCAGACTCTGAAGGAACTTAGACTTCCTGTC HS_assemblymutate CTCCTGGTGGTGCAGCTCAGCGACAAATATCAGACTCTGAAGGAACTTAGACTTCCTGTC HS_haplotype2 CTCCTGGTGGTGCAGCTCAGCGACAAATATCAGACTCTGAAGGAACTTAGACTTCCTGTC ************************* ********************************** HS_haplotype1 ACATTTTTAAGGGGCAAGTAATGCAGTGAAAAAATTAGATAGAAGATTACAGTTTTGTTT HS_assemblymutate ACATTTTTAAGGGGCAAGTAATGCAGTGAAAAAATTAGATAGAAGATTACAGTTTTGTTT HS_haplotype2 ACATTTCTAAGGGGCAAGTAATGCAGTGAAAAAATTAGATAGAAGATTACAGTTTTGTTT ****** ***************************************************** HS_haplotype1 GGCTTCATTCTATTAAAACATAGGCATTTGGAAGGTTTTATATAGTTTTAGTAGAAGCCT HS_assemblymutate GGCTTCATTCTATTAAAAAATAGGCATTTGGAAGGTTTTATATAGTTTTAGTAGAAGCCT HS_haplotype2 GGCTTCACTCTGTTAAAAAATAGGCATTTGGAAGGTTATATATAGTTTTAGTAGAAGCCT ******* *** ****** ****************** ********************** HS_haplotype1 GGGGCTGCGCCGAAACCCCACAGCTGAAGATGCACTTTTTCCTTCTCATTTAGTGACAGG HS_assemblymutate GGGGCTGCGCCGAAACCCCACAGCTGTAGATGCACTTTTTCCTTCTCATTTAGTGACAGG HS_haplotype2 GGGGCTGCGCCGAAACCCCACAGCTGTAGATGCACTTTTTCCTTCTCATTTAGTGACAGG ************************** ********************************* HS_haplotype1 ACTTTTTGGACTAAAAGGCATGTAGCTTCCTCAATTTAATATCACCCGGGGCCTGGATGT HS_assemblymutate ACTTTTTAGACTAAAAGGCATGTAGCTTCCTCAATTTAATATCACCCGGGGCCTGGATGT HS_haplotype2 ACTTTTTAGACTAAAAGGCATGTAGCTTCCTCAATTTAATATCACCCGGGGCCTGGATGT ******* **************************************************** HS_haplotype1 GCATATATCAAGAGATATTACATTGCATCTGGATGTATATTCCGGGAGCGGAGTTTTCTT HS_assemblymutate GCATATATCAAGAGATATTACATTCCATCTGTATGTATATTCCGGGAGCTGAGTTTTCTT HS_haplotype2 GCATATATCAAGAGATATTACATTCCATCTGTATGTATATTCCGGGAGCTGAGTTTTCTT ************************ ****** ***************** ********** HS_haplotype1 GCTCATCAAAAAACCGTAGCTCCGTTTCATGATGAACGTGCGCAGCTGCACACGCCCCGC HS_assemblymutate GCTCATCAAAAGACAGTAGTTCCGTTTCATGATGAACGTGCGCAGCTGCACACGCCCCGC HS_haplotype2 GCTCATCAAAAGACAGTAGTTCCGTTTCATGATGAACGTGCGCAGCTGCACACGCCCCGC *********** ** **** **************************************** HS_haplotype1 ACATTCAATCGCTGGATATACTAGACAAACCAGGCCGGAGTACTCACTTAACAGATGAGG HS_assemblymutate ACATTCAATCGCTGGATATACTAGACAAGCCAGGCCGGAGTACTCACTTAACAGATGAGG HS_haplotype2 ACATTCAATCGCTGGATATACTAGACAAGCCAGGCCGGAGTACTCACTTAACAGATGAGG **************************** ******************************* HS_haplotype1 GAGGGAGTTGCCACATTTCTTCCCTTTAACCCATCAGACCAATATCAGAGGCCGGACAGG HS_assemblymutate GAGGGAGTTGCCACATTTCTTCCCTTTAACCCATCAGACCAATATCAGAGGCAGGACAGG HS_haplotype2 GAGGGAGTTGCCACATTTCTTCCCTTTAACCCATCAGACCAATATCAGAGGCAGGACAGG **************************************************** ******* HS_haplotype1 TGCCACCTTTCACCTAAAAAGCAAAAAAGAGGGGACAGCCCTCTCACAGGTCTCGCCGGG HS_assemblymutate TGCCACCTTTCACCTAAAAAGCAAAAAAGAGGGGACAGCCCTCTCACAGGTCTCGCCGGG HS_haplotype2 TGCCACCTTTCACCTAAAAAGCAAAAAAGAGGGGACAGCCCTCTCACAGGTCTCGCCGGG ************************************************************ HS_haplotype1 AGGTATGAGTACTATGAGCCTCATTCCCCCATCACGAATCGCCTCTGCCCTGCTAGTAGT HS_assemblymutate AGGTATGAGTACTATGAGCCTCATTCCCCCATCACGAATCGCCTCTGCCCTGCTAGTAGT HS_haplotype2 AGGTATGAGTACTATGAGCTTCATTCCCCCATCAGGAATCGCCTCTGCCCTGCTAGTAGT ******************* ************** ************************* HS_haplotype1 TTGGTCAAATGGTGAAAACTACAGTCATTAGGCAGCCAAGTTTTATTGCTGAGAAATCCT HS_assemblymutate TTGGTCAAATGGTGAAAACTACAGTCATTAGGCAGCCAAGTTTTATTGCTGAGAAATCCT HS_haplotype2 TTGGTCAGATGGTGAAAACTACCGTCATTAGGCAGCCAAGTTTTATTGCTGAGAAATCCT ******* ************** ************************************* HS_haplotype1 ATATCTGTTCCTCAAATTGGCAACAAGAGAGAGGACATGCCTTGCTAATTTAATTTTTAA HS_assemblymutate ATATCTGTTCCTCAAATTGGCAACAAGAGAGAGGACATGCCTTGCTAATTTAATTTTTAA HS_haplotype2 ATATCTGTTCCTCAAATTGGCAACAAGAGAGAGGACATGCCTTGCTAATTTAATTTTTAA ************************************************************ HS_haplotype1 ACCAGCTGCTGAGTTGCCAGGTCTCCTAATTTACATATGTGCGCCTCCAGCCTGTAATTT HS_assemblymutate ACCAGCTGCTGAGTTGCCAGGTCTCCTAATTTACATATGTGCGCCTCCAGCCTGTAATTT HS_haplotype2 ACCAGCTGCTGAGTTGCCAGGTCTCCTAATTTACATATGTGCGCCTCCAGCCTGTAATTT ************************************************************ HS_haplotype1 TATTAAAAAATAAGGTAAATCTGGGGGATTACCCGCCTGCCCCGCCCCCACCCAAAATAT HS_assemblymutate TATTAAAAAATAAGGTAAATCTGGGGGATTCCCCGCCTGCCCAGCCCCCACCCAAAATAT HS_haplotype2 TATTAAAAAATAAGGTAAATCTGGGGGATTCCCCGCCTGCCCAGCCCCCACCCAAAATAT ****************************** *********** ***************** HS_haplotype1 ATATTTTTAATGGTGGCAGGCTGTCAGGGGGTTCTTCCTTCCATAAATAAACACTGCAAC HS_assemblymutate ATATTTTTAATGGTGGCCGGCTGTCAGGGGGTTCTTCCTTCCATAAATAAACACTGCAAC HS_haplotype2 ATATTTTTAATGGTGGCCGGCTGTCAGGGGGTTCTTCCTTCCATAAATAAACACTGCAAC ***************** ****************************************** HS_haplotype1 CACCACCCCCTGGCAGGGAGGTGGGAAGAACTTGATTGTGGTTCCTTTCCTTCTCCAGTG HS_assemblymutate CACCACCCCCTGGCAGGGAGGTGGGGAGAACTTGATTGTGGTTCCTTTCCTTCTCCAGTG HS_haplotype2 CACCACCCCCTGGCAGGGAGGTGGGGAGAACTTGATTGTGGTTCCTTTCCTTCTCCAGTG ************************* ********************************** HS_haplotype1 TGAAACATTTCGGAAAGATAGTTCCTGCCCATGGGAGTTGGTTCAATCCCATTTAGACCA HS_assemblymutate TGAAACATTTCGGAAAAATAGTTCCTGCCCATGGGAGTTGGTTCAATCCCATTCAGACCA HS_haplotype2 TGAAACATTTCGGAAAAATAGTTCCTGCCCATGGGAGTTGGTTCAATCCCATTCAGACCA **************** ************************************ ****** HS_haplotype1 TGCCTGGCCTGTCGCCACATATCGCTGAAATCTCTCAGGCCAGGTGCCCCAACAGTGCAC HS_assemblymutate GGCCTGGCCTGTCGCCACATATCGCTGAAATCTCTCAAGCCAGGTGCCCCAACAGTGCAC HS_haplotype2 GGCCTGGCCTGTCGCCACATATCGCTGAAATCTCTCAAGCCAGGTGCCCCAACAGTGCAC ************************************ ********************** HS_haplotype1 TAAGTTTTGAGTCATTTGTGTACTACAGGCTTTTTAGGAGACTTTGAGGCTGAGATACTA HS_assemblymutate TAAGTTTTGAGTCATTTGTGTACTACAGGCTTTTTAGGAGACTTTGAGGCTGAGATACTA HS_haplotype2 TAAGTTTTGAGTCATTTGTGTACTACAGGCTTTTTAGGAGACTTTGAGGCTGAGATACTA ************************************************************ HS_haplotype1 AAGAGGGCCTGAGACAAAGACTCAAACTCGGGAGGTTGACTCCAAATACAAAAAGGTTCC HS_assemblymutate AAGAGGGCCTGAGACAAAGACTCAAACTCGGGAGGTTGACTCCAAATACAAAAAGGTTCC HS_haplotype2 AAGAGGGCCTGAGACAAAGACTCAAACTCGGGAGGTTGACTCCAAATACAAAAAGGTTCC ************************************************************ HS_haplotype1 ACGCATCAGCTACATGGGTATAGCCAGACCTCCCTGCCTCCACTCTGTCCTGCTGGACTA HS_assemblymutate ACGCATCAGCTACATGGGTATAGCCAGACCTCCCTGCCTCCACTCTGTCCTGCTGGACTA HS_haplotype2 ACGCATCAGCTACATGGGTATAGCCAGACCTCCCTGCCTCCACTCTGTCCAGCTGGACTA ************************************************** ********* HS_haplotype1 GGAGAGGGATCTCTTCCCTTGCCACACTGTAATTAACTTGGGATAAGTAGAGTGGCTCAG HS_assemblymutate GGAGAGGGATCTCTTCCCTTGCCACACTGTAATTAACTTGGGATAAGTAGAGTGGCTCAG HS_haplotype2 GGAGAGGGATCTCTTCCCTTGCCACACTGTAATTAACTTGGGATAAGTAGAGTGGCTCAG ************************************************************ HS_haplotype1 CACCTTATTTTCCTGGGCCTCGGGTCTGGGACTACTCGCTGCCCCTCTAAGATGAATATA HS_assemblymutate CACCTTATTTTCCTGGGCCTCGGGTCTGGGACTACTCGCTGCCCCTCTAAGATGAATATA HS_haplotype2 CACCTTATTTTCCTGGGCCTCGGGTCTGGGACTACTCGCTGCCCCTCTAAGATGAATATA ************************************************************ HS_haplotype1 ATTTTTCAGCAGCTTTAGATTGTGTGTTCAGGAGTGATTCTCATTTATGAAGGAGACTCC HS_assemblymutate ATTTTTCAGCAGCTTTAGATTGTGTGTTCAGGAGTGATTCTCATTTATGAAGGAGACTCC HS_haplotype2 ATTTTCCAGCAGCTTTAGATTGTGTGTTCAGGAGTGATTCTCATTTATGAAGGAGACTCC ***** ****************************************************** HS_haplotype1 TGCCAGGATTTACCCTCTTGTTTTGTCCAGGAGTCGCCACCAAGGGAAAGGTGACAACCC HS_assemblymutate TGCCAGGATTTACCCTCTTGTTTTGTCCAGGAGTCGCCACCAAGGGAAAGGTGACAACCC HS_haplotype2 TGCCAGGATTTACCCTCTTGTTTTGTCCAGGAGTCGCCACCAAGGGAAAGGTGACAACCC ************************************************************ HS_haplotype1 CATGCCTCCAGAGAAAATTACCATGTTAATTTTCATGCAGGATGGAAACAGCAGTGTTTG HS_assemblymutate CATGCCTCCAGAGAAAATTACCATGTTAATTTTCATGCAGGATGGAAACAGCAGTGTTTG HS_haplotype2 CATGCCTCCAGAGAAAATTACCATGTTAATTTTCATGCAGGATGGAAACAGCAGTGTTTG ************************************************************ HS_haplotype1 AAATTTAGTTTGGGGAAGACTAATATGCTTGAAGTAGAAGGGCAAGAACTGGAGGCGGGT HS_assemblymutate AAATTTAGTTTGGGGAAGACTAATATGCTTGAAGTAGAAGGGCAAGAACTGGAGGCGGGT HS_haplotype2 AAATTTAATTTGGGGAAGACTAATATGCTTGAAGTAGAAGGGCAAGAAGTGGAGGCGGGT ******* **************************************** *********** HS_haplotype1 TACGCCTCGGCGCCTCTGCCCCCAGGCGGGCTATCTTACTGCTCATGTTCTCATGCTATA HS_assemblymutate TACGCCTCGGCGCCTCTGCCCCCAGGCGGGCTATCTTACTGCTCATGTTCTCATGCTATA HS_haplotype2 TACGCCTCGGCGCCTCTGCCCCCAGGCGGGCTATCTTACTGCTCATGTTCTCATGCTATA ************************************************************ HS_haplotype1 TAACAAGAAGAATATTTTTAAACCCGTGAAAACTAATTAAGATTTTACAGAGAGGCCAGG HS_assemblymutate TAACAAGAAGAATATTTTTAAACCCGTGAAAACTAATTAAGATTTTACAGAGAGGCCAGG HS_haplotype2 TAACAAGAAGAATATTTTTAAACCCGTGAAAACTAATTAAGATTTTACAGAGAGGCCAGG ************************************************************ HS_haplotype1 AAGATTCCGTGGTTGCAGTGGGTGTTTGAACCTGTAGTGTTTAAGAGTAATAGAGACCAC HS_assemblymutate AAGATTCCGTGGTTGCAGTGGGTGTTTGAACCTGTAGTGTTTAAGAGTAATAGAGACCAC HS_haplotype2 AAGATTCCGTGGTTGCAGTGGGTGTTTGAACCTGTAGTGTTTAAGAGTAATAGAGAGCAC ******************************************************** *** HS_haplotype1 CACAGAGCTTTTACATGGAGTTAAAATAAGTTTTAGGTCAAGGACAGAGGTGTCCTCTGA HS_assemblymutate CACAGAGCTTTTACATGGAGTTAAAATAAGTGTTTGGTCAAGGACAGAGGTGTCTTCTGA HS_haplotype2 CACAGAGCTTTTACATGGAGTTAAAATAAGTGTTTGGTCAAGGAGAGAGGTGTCTTCTGA ******************************* ** ********* ********* ***** HS_haplotype1 ACTGCCTTGATGGGCCAGGACCTCAGGCATAAATATTAGCTTTGCCTTCACTGAATATTT HS_assemblymutate ACTGCCTTGATGGGCCAGGACCTCAGGCATAAATATTAGCTTTGCCTTCACTGAATATTT HS_haplotype2 ACTGCCTTGATGGGCCAGGACCTCAGGCATAAATATTAGCTTTGCCTTCCCTGAATATTT ************************************************* ********** HS_haplotype1 CAAGTTCGGCTGGAAGTTAGTAAAGGCAGTCTTCCAGCACTCCTGGAGAAATCTTCTGGT HS_assemblymutate CAAGTTCGGCTGGAAGTTAGTAAAGGCAGTCTTCCAGCACTCCTGGAGAAATCTTCTGGT HS_haplotype2 CAAGTTCGGCTGGAAGTTAGTAAAGGCAGTCTTCCAGCACTCCTGGAGAAATCTTCTGGT ************************************************************ HS_haplotype1 CATTTAGGTTTCTCTTTTAGTTCTGGCCCCGTGCAGT-TTCGCCACCTTAGGGCTCATTC HS_assemblymutate CATTTAGGTTTCTCTTTTAGTTCTGGCCCCGTGCAGTATTCGCCACCTTAGGGCTCATTC HS_haplotype2 CATTTAGGTTTCTCTTTTAGTTCTGGCCCCGTGCAGT-TTCGCCACCTTAGGGCTCATTC ************************************* ********************** HS_haplotype1 AATTTCTACTAGCTCACTCCGTGCAGTTGGAAAAAGAAGAAAAGAAAGGCGGGCGGTGCA HS_assemblymutate AATTTCTAGTAGCTCACTCCGTGCGGTTGAAAAAAGAAGAAAAGACAGGCGGGCGGTGCA HS_haplotype2 AATTTCTAGTAGCTCACTCCGTGCGGTTGAAAAAAGAAGAAAAGACAGGCGGGCGGTGCA ******** *************** **** *************** ************** HS_haplotype1 AGGAAGGTAATGAACAGCCTGAGAAGCATAAGTGATCCGCGGCCATCTCTTTGAAACAAC HS_assemblymutate AGGAAGGTAATGAACGGCCTGAGAAGCATAAGTGATCCGCGGCCATCTCTTTGAAACAAC HS_haplotype2 AGGAAGGTAATGAACGGCCTGAGAAGCATAAGTGATCCGCGGCCATCTCTTTGAAACAAC *************** ******************************************** HS_haplotype1 ACATCCAGTGCTGGGCCGAGGTTAAGCAGTGGACAAAGATAAATATGCATAGTAGAGGTT HS_assemblymutate ACATCCAGTGCAGGGCTGAGGTTAAGCAGTGGACAAAGATAAATATGCATAGTAGAGGTT HS_haplotype2 ACATCCAGTGCAGGGCTGAGGTTAAGCAGTGGACAAAGATAAATATGCATAGTAGAGGTT *********** **** ******************************************* HS_haplotype1 GTCTCCATCTAGAGATGGCATTTTCCTATAATCCAGTCTCACCTTTTTTGTGGAGCCAAA HS_assemblymutate GTCTCCATCTAGAGATGGCATTTTCCTATAATCCAGTCTCACCTTTTTTGTGGAGCCAAA HS_haplotype2 GTCTCCATCTAGAGATGGCATTTTCCTATAATCCAGTCTCACCTTTTTTGTGGAGCCAAA ************************************************************ HS_haplotype1 ACAAGGTGCTTTAAACACATGAATTCCTCTCTTCATGGTGGCCGCTTCTGTAGCTCAAAA HS_assemblymutate ACAAGGTGCTTTAAACGCATGAATTCCTCTCTTCATGGTGGCCGCTTCTGTAGCTCAAAA HS_haplotype2 ACAAGGTGCTTTAAACGCATGAATTCCTCTCTTCATGGTGGCCGCTTCTGTAGCTCAAAA **************** ******************************************* HS_haplotype1 GAAACATTCCACATCTTGCTTTTAACAAGAGGCTGTGGTGCGAATTCAATGACTTAGCCT HS_assemblymutate GAAACATTCCACATCTTGCTTTTAACAAGAGGCTGTGGTGCGAATTCAATGACTTAGCCT HS_haplotype2 GAAACATTCCACATCTTGCTTTTAACAAGAGGCTGTGGTGCTACTTCAATGACTTAGCCT ***************************************** * **************** HS_haplotype1 GCAGTCTGTCCTGTCTGACTGTAGGTGAATGGGGATGCTTTTTTTTTGTGATGTACTCAC HS_assemblymutate GCAGTCTGTCCTGTCTGACTGTAGGTGAATGGGGATGCTTTTTTTTTGTGATGTACTCAC HS_haplotype2 GCAGTCTGTCCTGACTGACTGTAGGTGAATGGGGATGCTTGTTTTTTATGATGTACTCAC ************* ************************** ****** ************ HS_haplotype1 TGGAAAACTAGCCGAGAGGTGTGGCGCATCTCTTCGGCTCCAGAAATGCAGCCCCCGCCT HS_assemblymutate TGGAAAACTAGCCGAGAGGTGTGGCGCATCTCTTCGGCTCCAGAAATGCAGCCCCCGCCT HS_haplotype2 TGGAAAACTAGCCGAGAGGTGTGGCGCATCTCTTCGGCTCCAGAAATGCAGCCCCCGCCT ************************************************************ HS_haplotype1 GTTCAAGCTGTCAACCTCCAGTCACCACAGCCTCCTTCCCACTTCCTTGGGAAGCAAGAA HS_assemblymutate GTTCAAGCTGTCAACCTCCAGTCACCACAGCCTCCTTCCCACTTCCTTGGGAAGCAAGAA HS_haplotype2 GTTCAAGCTGTCAACCTCCAGTCACCACAGCCTCCTGCCCACTTCCTTGGGAAGCAAGAA ************************************ *********************** HS_haplotype1 CAGAGTTCCAGCCGAGACACATCATTCTTTTTTGAGCAGCCTCCCCTTGTTCCTGGTGTG HS_assemblymutate CAGAGTTCCAGCCGAGACACATCATTCTTTTTTGAGCAGCCTCCCCTTGTTCCTGGTGTG HS_haplotype2 CAGAGTTCCAGCCGAGACACATCATTCTTTTTCGAGCAGCCTCCCCTTGTTCCTTGTGTG ******************************** ********************* ***** HS_haplotype1 GGTGCAAGTTCACATGGCTCATGCATTCAATACAATGGAAGCCCTATTGATATGATCCTC HS_assemblymutate GGTGCAAGTTCACATGGCTCATGCATTCAAAACAATGGAAGCCCTAGTGATATGATCCTC HS_haplotype2 GGTTCAAGTTCACATGGCTCATGCATTCAAAACAGCGGAAGCCCTAGTGATATGATCCTC *** ************************** *** ********** ************* HS_haplotype1 ATGTATCTGCTTTTGATATTTTCATTAATCCACCCGCCCAGCTGGGCTCAGTCTGAACAT HS_assemblymutate ATGTATCTGCTTTTGATATTTTCATTAATCCACCCGCCCAGCTGGGCTCAGTCTGAAAAT HS_haplotype2 ATGTATCTGCTTTTGATATTTTAATTAATCCACCCGCCCAGCTGGGCTCAGTCTGAAAAT ********************** ********************************** ** HS_haplotype1 TGTAAAGTTCCCTGAACATCCCCTCATGCTTGCAAATGAATTTTTCTAGGATTGCTCCAC HS_assemblymutate TGTAAAGTTCCCTGAACATCCCCTCATGCTTGCAAATGAATTTTTCTAGGATTGCTCCAC HS_haplotype2 TGTAAAGTTCCCTGAACATCCCCTCATGCTTGCAAATGAATTTTTCTAGGATTGCTCCAC ************************************************************ HS_haplotype1 CCAGCCTGCGTAGTGAGGAAAGAAAACAGAGGTGAGGCATGCTCAGGGGAACCCTGCCTG HS_assemblymutate CCAGCCTGCGTAGTGAGGAAAGAAAACAGAGGTGAGGCATGCTCAGGGGAACCCTGCCTG HS_haplotype2 CCAGCCTGCGTAGTGAGGAAAGAAAACAGAGGTGAGGCATGCTCAGGGGAACCCTGCCTG ************************************************************ HS_haplotype1 TGGCCAACCTCAGCCTCCTTTGAAATGAAATATATCTGATTCTGATGATGAAGCAGGCCT HS_assemblymutate TGGCCAACCTCAGCCTCCTTTGAAATGAAATATATCTGATTCTGATGATGAAGCAGGCCT HS_haplotype2 TGGCCAACCTCAGCCTCCTTTGAAATGAAATATATCTGATTCTGATGGTGAAGCAGGCCT *********************************************** ************ HS_haplotype1 CACACATGTTTACTTCATAGAGATAATTCTAGATAATGTATTCTAATGTGTCTTCATCGA HS_assemblymutate CACACATGTTTACTTCATAGAGATAATTCTAGATAATGTATTCTAATGTGTCTTCATCGA HS_haplotype2 CACACATGTTTACTTCAAAGAGATAATTCTAGATAATGTATTCTAATGTGTCTTCATTGA ***************** *************************************** ** HS_haplotype1 GTATATTCTCTTTTCTTTACCTACAGGCTGGGGTTTTAGGACCATCCCTAGGCCCTGTAA HS_assemblymutate GTATATTCTCTTTTCTTTACCTACAGGCTGGGGTTTTAGGACCATCCCTAGGCCCTGTAA HS_haplotype2 GTATATTCTCTTTTCTTTACCTACAGGCGGGGTTTTTAGGACCATCCCTAGGCCCTGTAA **************************** *** *************************** HS_haplotype1 AAAAAACTATAATGAGAGCATGTCTCCTCCCTACCAGCCGGGGCAACATCTCCATCCCAG HS_assemblymutate AAAAAACTATAATGAGAGCATGTCTCCTCCCTACCAGCCGGGGCAACATCTCCATCCCAG HS_haplotype2 AAAAAACTATAATGAGAACATGTCTCCTCCCCACCAGCCGGGGCAACATCTCCATCCCAG ***************** ************* **************************** HS_haplotype1 GTGCACTTCCTCCCCTAAAGTACCTGAATCTCTAAGCAAGTGAGTACTTTGATCTGTCTG HS_assemblymutate GTGCACTTCCTCCCCTAATGTACCTGAATCTCTAAGCAAGTGAGTACTTTGATCTGTCTG HS_haplotype2 GTGCACTTCCTCCCCTAATGTACCTGAATCTCTAAGCAAGTGAGTGCTTTGATCTGTCTG ****************** ************************** ************** HS_haplotype1 TGCTGACTACAGTAAGTACAAGCTCTACAGGTAGGCTGGTGATGGCTCTGTTTCCTTTGG HS_assemblymutate TCCTGACTACAGTAAGTACAAGCTCTACAGGTAGGCTGGTGATGGCTCTGTTTCCTTTGG HS_haplotype2 TCCTGACTACAGTAAGTACAAGCTCTACAGGTAGGCTGGTGATGGCTCTGTTTCCTTTGG * ********************************************************** HS_haplotype1 TGAGCTTCATTCCCTTTCTCTGCAGGCTGGCCAGCCTCGTCCCGAGGGGAAAAGACAGGC HS_assemblymutate TGAGCTTCATTCCCTTTCTCTGCAGGCTGGCCAGCCTCGTCCCGAGGGGAAAAGACAGGC HS_haplotype2 TGAGCTTCATTCCCTTTCTCTGCAGGCTGGCCAGCCTCGTCCCGAGGGGAGAAGACAGGC ************************************************** ********* HS_haplotype1 TAAAATACAGCTTTGGCCAGCTGCACTTTGAGGGAGACCCAAACAAAGTTTTAATGTGCA HS_assemblymutate TAAAATACAGCTTTGGCCAGCTGCACTTTGAGGGAGACCCAAACAAAGTTTTAATGTGCA HS_haplotype2 TAAAATACAGCTTTGGCCAGCTGCACTTTGAGGGAGACCCAAACAAAGTTTTAATGTGCA ************************************************************ HS_haplotype1 GGAAGGATAACAAGTGCTGCCTGAAAGAATTTAGCTTTTATTCAAGGAGGACCGGTGGCA HS_assemblymutate GGAAGGATAACAAGTGCTGCCTGAAAGAATTTAGCTTTTATTCAAGGAGGACCGGTGGCA HS_haplotype2 GGAAGGATAACAAGTGCTGCCTGAAAGAATTTAGCTTTTATTCAAGGAGGACCGGTGGCA ************************************************************ HS_haplotype1 CCTGCCCTTGTAAATTAGCTGGAGTTGAGAGGAGGAGCATCATGTTGCTTCCATAGCTGT HS_assemblymutate CCTGCCCTTGTAAATCAGCTGGAGTTGAGAGGAGGAGCATCATGTTGCTTCCATAGCTGT HS_haplotype2 CCTGCCCTTGTAAATCAGCTGGAGTTGAGAGGAGGAGCATCATGTTGCTTCCATAGCTGT *************** ******************************************** HS_haplotype1 TTCATGTAATGCTGAGCACTGTGGTACTAAAGCCCTCTCTGGAGCTCTGCAACAATCCGA HS_assemblymutate TTCATGTAATGCTGAGCACTGTGGTACTAAAGCCCTCTCTGGAGCTCTGCAACAATCCGG HS_haplotype2 TTCATGTAATGCTGAGCACTGTGGTACTAAAGCCCTCTCTGGAGCTCTGCAACAATCCGG *********************************************************** HS_haplotype1 GAGATTTTCATTTCTTGGCCACCGCGATTGAACCCCCCAGTATTACCACATAACAACAAA HS_assemblymutate GAGATTTTCATTTCTTGGCCACCGCGATTGAACCCCCCAGTATTACCACATAACAACAAA HS_haplotype2 GAGATTTTCCTTTCTTGGCCACCGCGATTGAACCCCCCAGTATTACCACATAACAACAAA ********* ************************************************** HS_haplotype1 GTGGAAGCTTTATTTTCCTCTGGACGTCACTTACAGATTGGTTGCCAGAAGAAAGGTCTG HS_assemblymutate GTGGAAGCTTTATTTTCCTCTTGACGTCACTTACAGATTGGTTGCCAGAAGAAAGGTCTG HS_haplotype2 GTGGAAGCTTTATTTTCCTCTTGACGTCACTTACAGAGTGGTTGCCAGAAGAAAGGTCTG ********************* *************** ********************** HS_haplotype1 CCTCGGGGCTAATACATGCGCCTGTTCATTATGTTGGTGCAAATACACATGCCAAGAATG HS_assemblymutate CCTCGGGGCTAATACATGCGCCTGTTCATTATGTTGGTGCAAATACACATGCCAAGAATG HS_haplotype2 CCTCGGGGCTAATACATGCGCCTGTTCATTAAGTTGGTGCAAATATACATGCCAAGAATG ******************************* ************* ************** HS_haplotype1 GGGCCACAGTGCTCACCCCACAGGAGTGAGAGATGAACCACAATGAGACCATCACAATTA HS_assemblymutate GGGCCACAGTGCTCACCCCACAGGAGTGAGAGATGAACCACAATGAGACCATCACAATTA HS_haplotype2 GGGCCACAGCGCTCACCCCACAGGAGTGAGAGATGAACCACAAGGACACCATCACAATTA ********* ********************************* ** ************* HS_haplotype1 GGCAGAAAAGATGACTTACCTCCATCTCAAATGGGGAGGTGCGCGGTGCTTGTGGTGTCA HS_assemblymutate GGCAGAAAAGATGACTTACCTCCATCTCAAATGGGGAGGTGCGCGGTGCTTGTGGTGTCA HS_haplotype2 GGCAGAAAAGATGACTTACCTCCATCTCAAATGGGGAGGTGCGCGGTGCTTGTGGTGTCA ************************************************************ HS_haplotype1 TTTGATCAATTTATCAAGACACCACCATTTAAAGAACATTTTAAGTGTACAGGGATGGCA HS_assemblymutate TTTGATCAATTTATCAAGACACCACCATTTAAAGAACATTTTAAGTGTACAGGGATGGCA HS_haplotype2 TTTGATCAATTTATCAAGACACCACCATTTAAAGAACATTTTGAGTGTACAGGGATGGCA ****************************************** ***************** HS_haplotype1 CTGTAAACACCGGAGTGGGTCTCTGACCTTGGGACAAAAAAGGCTCAAGCAAGTTCTTCC HS_assemblymutate CTGTAAACACCGGAGTGGGTCTCTGACCTTGGGACAAAAAAGGCTCAAGCAAGTTCTTCC HS_haplotype2 CTGTAAACACCGGAGTGGGTCTCTGACCTTGGGACAAAAAAGGCTCAAGCAAGTTCTTCC ************************************************************ HS_haplotype1 TGAAGTATACATTTTCTCGTTCTAGAGAGGGGAAAACCGCATGAGAGAAGGCCTGACTCT HS_assemblymutate TGAAGTATACATTTTCTCGTTCTAGAGAGGGGAAAACCGCATGAGAGAAGGCCTGACTCT HS_haplotype2 TTAAGTATACATTTTCTCGTTCTAGAGAGGGGAAAACCGCATGAGAGAAGGCCTGACTCT * ********************************************************** HS_haplotype1 TTTAATTTTATGGCACTTTTGTTTTAAGGTACATATGGAGAAGAGTTCACGTACCAACTC HS_assemblymutate TTTAATTTTATGGCACTTTTGTTTTAAGGTACATATGGAGAAGAGTTCACGTACCAACTC HS_haplotype2 TTTAATTTTATGGCACTTTTGTTTTAAGGTACATATGGAGAAGAGTTCACGTACCAACTC ************************************************************ HS_haplotype1 TTTTAGTCCCAGCTCTGGAACAAAACAATATAATGCAGTTTGCTCACCGTGTTCTGGTTG HS_assemblymutate TTTTAGTCCCAGCTCTGGAACAAAACAATATAATGCAGTTTGCTCACCGTGTTCTGGTTG HS_haplotype2 TTTTAGTCCCACCTCTTGAACAAAACAATATAATGCAGTTTGCTCACCGTGTTCTGGTTG *********** **** ******************************************* HS_haplotype1 TTGCCTTTCCAGGATGCTTCACTTCAGTGTCATTTATTACCATACATTTCCAGTGGGGAG HS_assemblymutate TTGCCTTTCCAGGATGCTTCACTTCAGTGTCATTTATTACCATACATTTCCAGTGGGGAG HS_haplotype2 TTGCCTTTCCAGGATGCTTCACTTCAGTGTCATTTATTACCATAAATTTCCAGTGGGGAG ******************************************** *************** HS_haplotype1 TAGGGGAATTGCTGGGGTCACACACGGTGGGGTGTACTTTCAAAAAAACCCTTGACTTCT HS_assemblymutate TAGGGGAATTGCTGGGGTCACACACGGTGGGGTGTACTTTCAAAAAAACCCTTGACTTCT HS_haplotype2 TAGGGGAATTGCTGGGGTCACACACGGTGGGGTGTACTATCAAAAAAACCCTTGACTTCT ************************************** ********************* HS_haplotype1 TCTCTTGGACATGAACATTGCCACCGACTCTGTAGTCTAATTTGCTGACACCTCATTCTT HS_assemblymutate TCTCTTGGACATGAACATTGCCACCGACCCTGTAGTCTAATTTGCTGACACCTCATTCTT HS_haplotype2 TCTCTTGGACATGAACATTGCCACCGACCCTGTAGTCTAATTTGCTGACACCTCATTCTT **************************** ******************************* HS_haplotype1 CCTGCACCAGGGTGGGGCGCAGTTTAACTATCCCCAACATTAGGGGGCTCACACCAGAGA HS_assemblymutate CCTGCACCAGGGTGGGGCGCAGTTTAACTATCCCCAACATTAGGGGGCTCACACCAGAGA HS_haplotype2 CCTGCACCAGGGTGGGGCGCAGTTTAACTATCCCCAACATTAGGGGGCTCACACCAGAGA ************************************************************ HS_haplotype1 CAGTCTCACGAAGACCTCGGGTGAGTTAAGACTGGGTTTTAGAAAAGACCATGTCTGGTC HS_assemblymutate CAGTCTCACGAAGACCTCGGGTGAGTTAAGACTGGGTTTTAGAAAAGACCATGTCTGGTC HS_haplotype2 CAGTCTCACGAAGACCTCGGGTGAGTTAAGACTGGGTTTTAGAAAAGACCATGTCTGGTC ************************************************************ HS_haplotype1 ATAAATAGAATCTCCCTCAAAATGTGGTGGAGAAATAGTCAGCATAAATTGGACAATCCT HS_assemblymutate ATAAATAGAATCTCCCTCAAAATGTGGTGGAGAAATAGTCAGCATAAATTGGACAATCCT HS_haplotype2 ATAAATAGAATCTCCCTCAAAACGTGGTGGAGAAATAGTCCGCATAAATTGGACAATCCT ********************** ***************** ******************* HS_haplotype1 GTGCCTAGACAAAGTGCAAGAGGTTTGATATTAGAAGAGCTGAATGAATATGAAAGCAGC HS_assemblymutate GTGCCTAGACAAAGTGCAAGAGGTTTGATATTAGAAGAGCTGAATGAATATGAAAGCAGC HS_haplotype2 GTGCCTAGACAGAGTGCAAGAGGTTTGATATTAGATGAGCTGAATGAATATGAAAGCAGC *********** *********************** ************************ HS_haplotype1 GGCGCAGTGACTTCTTCCTTGAACTCTGTGGCAGAGTCTTCTAATGTAATTCCATCTTTA HS_assemblymutate GGCGCAGTGACTTCTTCCTTGAACTCTGTGGCAGAGTCTTCTAATGTAATTCCATCTTTA HS_haplotype2 GGCGCAGTGACTTCTTCCTTGCACTCTGTGGCAGAGTCTTCTAATGTAATTCCATCTTTA ********************* ************************************** HS_haplotype1 GGCGGGGAGTTGGCCCCCAAGTAGAGGGGGCAACTGGAGGGGGTTCACTACATGATTAAA HS_assemblymutate GGCGGGGAGTTGGCCCCCAAGTAGAGGGGGCAACTGGAGGGGGTTCACTACATGATTAAA HS_haplotype2 GGCGGGGAGTTGGCCCCCAAGTAGAGGGGGCAACTGGAGGGGGTTCACTACATGATTAAA ************************************************************ HS_haplotype1 TCATCTGGAGTGGCGGGAGACCTACTGTGATAACAAAAACACTCTGAAGTTTTCTATCAC HS_assemblymutate TCATCTGGAGTGGCGGGAGACCTACTGTGATAACAAAAACACTCTGAAGTTTTCTATCAC HS_haplotype2 TCATCTGGAGTGGCGGGAGACCTACTGTGATAACAAAAACACTCTGAAGTTTTCTATCAC ************************************************************ HS_haplotype1 ATATCACAAATGGAAAAATAGAGTATCAATAAATCTGATTATGTAACTAGGTTGTGCTGG HS_assemblymutate ATATCACAAATGGAAAAATAGAGTATCAATAAATCTGATTATGTAACTAGGTTGTGCTGG HS_haplotype2 ATATCACAAATGGAAAAATAGAGTATCAATAAATCTGATTATGTAACTAGGTTGTGCTGG ************************************************************ HS_haplotype1 TATCAAGTCCTGCCACATGAGATGACCCTAAGAAGTGGGAGGCTGAGATAAGAAAAGTCG HS_assemblymutate TATCAAGTCCTGCCACATGAGATGTCCCTAAGAAGTGGGAGGCTGAGATAAGAAAAGTCG HS_haplotype2 TATCAAGTCCTGCCACATGAGATGTCCCTAAGAAGTGGGAGGCTGAGATAAGAAAAGTCG ************************ *********************************** HS_haplotype1 ACCTCTATTAGAAAGTTTTAATATTTGTATTTTTGGGGTGGTGGGCCACTGGTCCAAGTG HS_assemblymutate ACCTCTATTAGAAAGTTTTAATATTTGTATTTTTGGGGTGGTGGGCCACTGGTCCAAGTG HS_haplotype2 ACCTCTATTAGAAAGTTTTAATATTTGGATTTTTGGGGTGGTGGGCCACTGGTCCAAGTG *************************** ******************************** HS_haplotype1 TCTGCATGCCCAGATCTGCCACCCAGATAAATATAGACACCATTTAGAAGGAAGTAAGTT HS_assemblymutate TCTGCATGCCCAGATCTGCCACCCAGATAAATATAGACACCATTTAGAAGGAAGTAAGTT HS_haplotype2 TCTGCATGCCCAGATCTGCCACCCAGATAAATAGAGACACCATTTAGAAGGAAGTAAGTT ********************************* ************************** HS_haplotype1 AAATTGCAAACATTATTGAGATTATGGTTCTGAAAATT--GAACTGACCTGGGATTCAAG HS_assemblymutate AAATTGCAAACATTATTGAGATTATGGTTCTGAAAATTAAGAACTGACCTGGGATTCAAG HS_haplotype2 AAATTGCAAACATTATTGAGATTATGGTTCTGAAAATG--GAACTGACCTGGGATTCAAG ************************************* ******************** HS_haplotype1 GCCCTTCTGTCCAGCCAGGTGAGGAATTTTACTGAGGCTGGTTTCGTTAGTACTTTAAGA HS_assemblymutate GCCCTTCTGTCCAGCCAGGTGAGGAATTTTACTGAGGCTGGTTTCGTTAGTACTTTAAGA HS_haplotype2 GCCCTTCTGTCCAGCCAGGTGAGGCATTTTACTGAGGCTGGTTTCGTTAGTACTTTAAGA ************************ *********************************** HS_haplotype1 GAGATGGGCTGGAGGTTCATGTGAAGCTCTTTCAAAGTAATCCCGTCTTCTCTGTACCTG HS_assemblymutate GAGATGGGCTGGAGGTTCATGTGAAGCTCTTTCAAAGTAATCCCGTCTTCTCTGTACCTG HS_haplotype2 GAGATGGGCTGGAGGTTCATGTGAAGCTCTTTCAAAGTAATCCCGTCTTCTCTGTACCTG ************************************************************ HS_haplotype1 TGGGGGTTATACAGAGGAAGATCCTTTTGTGAGAGCTCATCATCTTCCGAGCCTTTCTTA HS_assemblymutate TGTGGGTTATACAGAGGAAGATCCTTTTGTGAGAGCTCATCATCTTCCGAGCCTTTCTTA HS_haplotype2 TGTGGGTTATACAGAGGAAGATCCTTTTGTGAGAGCTCATCATCTTCCGAGCCTTTCTTA ** ********************************************************* HS_haplotype1 GAAATTGTAATCCAGGCAGGATTACTGATATAGGACCCATTATGAGTTGTGCAGATGAAA HS_assemblymutate GAAATTGTAATCCAGGCAGGATTACTTATATAGGACCCATTATGAGTTGTGCAGATGAAA HS_haplotype2 GAAATTGTAATCCAGGCAGGATTACTTATATAGGACCCATTATGAGTTGTGCAGATGAAA ************************** ********************************* HS_haplotype1 CAACTCTGTGCTGAGATGGAAATAACAAACTTATAGTTAGTGGCCGGCGGGGTCAACCTG HS_assemblymutate CAACTCTGTGCTGAGATGGAAATAACAAACTTATAGTTAGTGGCCGGCGGGGTCAACCTG HS_haplotype2 CAACTCTGTGCAGAGATGGAAATAACAAACTTATAGTTAGTGGCCGGCGGGGTCAACCTG *********** ************************************************ HS_haplotype1 CTTGTTCCTCACATCCGCCGCCAGGAAAGCATCTCCTTGCTCTACCCTTGTTCCGAGACT HS_assemblymutate CTTGTTCCTCACATCCGCCGCCAGGAAAGCATGTCCTTGCTCTACCCTTGTTCCGAGACT HS_haplotype2 CTTGTTCCCCACATCCTCCGCCAGGAAAGCATGTCCTTGCTCTACCCTTGTTCCGAGACT ******** ******* *************** *************************** HS_haplotype1 GACCCCGTCGCCTCTTCTTGCAGGAAAAGTCCTGTACCCAATTTAGATCGCAGTGGCAGG HS_assemblymutate GACCCCGTCGCCTCTTCTTGAAGGAAAAGTCCTGTACCCAATTTAGATCGCAGTGGCAGG HS_haplotype2 GACCCCGTCGCCTCTTCTTGAAGGAAAAGTCCTGTACCCAATTTCGATCGCAGTGGCTGG ******************** *********************** ************ ** HS_haplotype1 ATGTTATCTCTAGGAACGTAGGAAGAAAGGAATTCCCGCAGGGGAGGTAATTATTACTAA HS_assemblymutate ATGTTATCTCTAGGAACGTAGGAAGAAAGGAATTCCCGCAGGGGAGGTAATTATTACTAA HS_haplotype2 ATGTAATCTCTAGGAACGTAGGGAGAAAGGAATTCCCGCAGGGGAGGTAATTATTACTAA **** ***************** ************************************* HS_haplotype1 GGAATTGCAGCGACCCACGATTCCACTCTTTCTATTGTATGTCTGAATCGATCTTCTGCA HS_assemblymutate GGAATTGCAGCGACCCACGATTCCACTCTTTCTATTGTATGTCTGAATCGATCTTCTGCA HS_haplotype2 GGAATTGCAGCGACCCACGATTCCACTCTTTCTATTGTATGTCTGAATCGATCTTCTGCA ************************************************************ HS_haplotype1 ACCCAGCCACCTCACCCAACCTCAGCTGGAGAATGATACGGTGTGAGTTGAGAAATAGAT HS_assemblymutate ACCCAGCCACCTCACCCAACCTCAGCTGGAGAATGATACGGTGTGAGTTGAGAAATAGAT HS_haplotype2 ACCCAGCCACCTCACCCAACCTCAGCTGGAGAATGATACGGTGTGAGTTGAGAAATAGAT ************************************************************ HS_haplotype1 TCAACACAGATACTCAGGAATTTTCCTTGTAGCGCAGTGGTGTGCCTCTCCTGTGGAAGG HS_assemblymutate TCAACACAGATACTCAGGAATTTTCCTTGTAGCGCAGTGGTGTGCCTCTCCTGTGGAAGG HS_haplotype2 TCAACACAGATTCTCAGGAATTTTCCTTGTAGCGCAGTGGTGTGCCTCTCCTGTGGAAGG *********** ************************************************ HS_haplotype1 CGTCGATTTTGATCCAGAAAATTAGTCCACCTGTAGAGAACAGAGCCAGGTGGTAGATAG HS_assemblymutate CGTCGATTTTGATCCAGAAAATTAGTCCACCTGTAGAGAACAGAGCCAGGTGGTAGATAG HS_haplotype2 CGTCGATTTTGATCCAGAAAATTAGGCCACCTGTAGAGAACAGAGCCAGGTGGTAGATAG ************************* ********************************** HS_haplotype1 TCCTGAGTACCCACTGTTCCCAAGATAATAAAAATAAAGCACTCCTAGCCTTTTATTTAT HS_assemblymutate TCCTGAGTACCCACTGTTCCCAAGATAATAAAAATAAAGCACTCCTAGCCTTTTATTTAT HS_haplotype2 TCCTGAGTACCCACTGTTCCCAAGATAATAAAAATAAATCACTCCTAGCCTTTTATTTAT ************************************** ********************* HS_haplotype1 TCTGTCCCAAACAGTTAGATTGTCCCATTCCTCAAGAGCCACTCTGGTGAGTCAGGTCGG HS_assemblymutate TCTGTCCCAAACAGTTAGATTGTCCCATTCCTCAAGAGCCACTCTGGTGAGTCAGGTCGG HS_haplotype2 TCTGTCCCAAACAGTTAGATTGTCCCATTCCTCAAGAGCCACTCTGGTGAGTCAGGTCGG ************************************************************ HS_haplotype1 TCCATCCAGCTGCTGCGAAACTGCCACCGGAGTGCTGCAACTAAGGCCCAGCTAATTACT HS_assemblymutate TCCATCCAGCTGCTGCGAAACTGCCACCGGAGTGCTGCAACTAAGGCCCAGCTAATTACT HS_haplotype2 TCCATCCAGCTGCTGCGACACTGCCACCGGAGTGCTGAAACTACGGCCCAGCTAATTACT ****************** ****************** ***** **************** HS_haplotype1 CGGGGTCCCAGCTGAATGAGGCCCCCAACGTAGCCAGGCGTGATCCTAGTTTCCAGCCTC HS_assemblymutate CGGGGACCCAGCTGAATGAGGCCCCCAACGTAGCCAGGCGTGATCCTAGTTTCCAGCGTC HS_haplotype2 CGGGGACCCAGCTGAATGAGGCCCCCAACGTAGCCAGGCGTGATCCTAGTTTCCAGCGTC ***** *************************************************** ** HS_haplotype1 TGAGCTGAGGCTGCAGAGCTGAGTTGAATGGCTTCATTAAATGACGGAAGTGAGAGGAGC HS_assemblymutate TGAGCTGAGGCTGCAGAGCTGAGTTGAATGGCTTCATTAAATGACTGAAGTGAGAGGAGC HS_haplotype2 TGAGCTGAGGCTGCAGAGCTGAGTTGAATGGCTTCATTAAATGACTGAAGTGAGAGGAGC ********************************************* ************** HS_haplotype1 ATGTCCGGACCTCACACTCAAAAAAAAGAAGGAACAGAGATGTATTTTTGTTTTCTAAAT HS_assemblymutate ATGTCCGGACCTCACACTCAAAAAAAAGAAGGAACAGAGATGTATTTTTGTTTTCGAAAT HS_haplotype2 ATGTCCGGACCTCACACTCAAAAAAAAGAAGGAACAGAGATGTATTTTTGTTTTCGAAAT ******************************************************* **** HS_haplotype1 GATAACATGGGGGGGCCACTGCAGCAGTAATGTAGCATCTCAGAAGGGATTTCTTTTCAT HS_assemblymutate GATAAGATGGGGGGGCCACTGCAGCAGTAATGTACCATCGCAGAAGGGATTTCTTTTCAT HS_haplotype2 GATAAGATGGGGGGGCCACTGCAGCAGTAATGTACCATCGCAGAAGGGATTTCTTTTCAT ***** **************************** **** ******************** HS_haplotype1 CCAAAATAATATGACACCATGAGTCAGTGGGATCCAAAGGGCCACGAGGCAGGGTGTCCC HS_assemblymutate CCAATATAATATGACACCATGAGTCAGTGGGATCCAAAGGGCCATGAGGCAGTGTGTCCC HS_haplotype2 CCAATATAATATGACACCATGAGTCAGTGGGATCCAAAGGGCCATGAGGCAGTGTGTCCC **** *************************************** ******* ******* HS_haplotype1 AACCACCACTGAATCAATTCAGCGAGTTCTTGCCAAACTCTTCCCAGTAAAGAATTTGCC HS_assemblymutate AACCACCACTGAATCAATTCAGCGAGTTCCTGCCAAACTCTTCCCAGTAAAGAATTTGCC HS_haplotype2 AACCACCACTGAATCAATTCAGCGAGTTCCTGCCAAACTCTTCCCAGTAAAGAATTTGCC ***************************** ****************************** HS_haplotype1 ATGCAGAGTCAGTTTCTTTTTCTAAGTACAAGCTACAATTCTTCTTATAGAGGCCATCAG HS_assemblymutate ATGCAGAGTCAGTTTCGTTTTCTAAGTACAAGCTACAATTCTTCTTATAGAGGCCATCAG HS_haplotype2 ATGCAGAGTCAGTTTCGTTTTCTAAGTACAAGCTACAATTCTTCTTATAGAGGCCATCAG **************** ******************************************* HS_haplotype1 ATGGCGGACACCCAGGGTTCCTGAGTGAATCGGGCCGCAGGGGGGAGTGGAGGCTGACCT HS_assemblymutate ATGGCGCACACCCAGGGTTCCTGAGTGAATCGGGCCGCAGGGGGGAGTGCAGGCTGACCT HS_haplotype2 ATGGCGCACACCCAGGGTTCCTGAGTGAATCGGGCCGCAGGGGGGAGTGCAGGCTGACCT ****** ****************************************** ********** HS_haplotype1 CATCACATGAGGGGACCATGAGATATAATCTTAATGAGAACCCAGGCATGGAACCTTGCT HS_assemblymutate CATCACATGAGGGGACCTTGAGATATAATCTTAATGAGAACCCAGGCATGGAACCTTGCT HS_haplotype2 CATCACATGAGGGGACCTTGAGATATAATCTTAATGAGAACCCAGGCATGGAACCTTGCT ***************** ****************************************** HS_haplotype1 TTTTCCCTCACCACACTGCCAATCCTACTTTCACCT--CCCCTAGGCAAAGATAGGAATG HS_assemblymutate TTTTCCCTCACCACACTGCAAATCCTACTTTCTCCTCCCCCCTAGGCAAAGATAGGTATG HS_haplotype2 TTTTCCCTCACCACACTGCAAATCCTACTTTCTCCT--CCCCTAGGCAAAGATAGGTATG ******************* ************ *** ****************** *** HS_haplotype1 TGTGAGCAGTGGCTCACGCCAACTGGCCTTATCTGTATCAGCCGGCACAAAAAAAAGGCT HS_assemblymutate TGTGAGCAGTGGCTCACGCCAACTGGCCTTATCTGTATCAGCCGGCACAAAAAAAAGGCT HS_haplotype2 TGTGAGCAGTGGCTCACGCCAACTGGCCTTATCTGTATCAGCCGGCACAAAAAAAAGGCT ************************************************************ HS_haplotype1 GGCTTTCAATTCTTTGTTGGTTCTGAGAAAGATGGTTAAAAAGAAATCACCCCTGTTCCT HS_assemblymutate GGCTTTCAATTCTTTGTTGGTTCTGAGAAAGATGGTTAAAAAGAAATCAGCCCTGTTCCT HS_haplotype2 GGCTTTCAATTCTTTGTTGGTTCTGAGAAAGATGGTTAAAAAGAAATCAGCCCTGTTCCT ************************************************* ********** HS_haplotype1 GGGGGCCAGACTTCAGGGTTCAATCCCATGCAAGACGGGCGTAGTATATGAGTAAAACAG HS_assemblymutate GGGGGCCAGACTTCATGGTTCAATCCCATGCAAGACGGGCGTAGAATATGAGTAAAACAT HS_haplotype2 GGGGGCCAGACTTCATGGTTCAATCCCATGCAAGACGGGCGTAGAATATGAGTAAAACAT *************** **************************** ************** HS_haplotype1 AATTTACAGTTGGCTCAAGATCCTGGAGTGTTCTCTGAATACTCCTCTCAGCCAGTTTTA HS_assemblymutate AATTTACAGGTGGCTCAAGTTCCTGGAGTGTTCTCTGAATACTCCTCTCAGCCAGTTTTA HS_haplotype2 AATTTACAGGTGGCTCAAGTTCCTGGAGTGTTCTCTGAATACTCCTCTCAGCCAGTTTTA ********* ********* **************************************** HS_haplotype1 GTACACTGGGTGCCTCCTGAACTGGCTAGAAAGGCAACAAAAAAGGTGCAGTCCTTAGTG HS_assemblymutate GTACACTGGGTGCCTCCTGAACTGGCTAGAAAGGCAACAAAAAAGGTGCAGTCCTTAGTG HS_haplotype2 GTACACTGGGTGCCTCCTGAACTGGCTAGAAAGGCAACAAAAAAGGTGCAGTCCTTAGTG ************************************************************ HS_haplotype1 CTGGGCTGCCCAGGAGCTCTCCAAAATGTTCTCCCAGCTCAACAAAAGAATTAGGGGAGA HS_assemblymutate CTGGGCTGCCCAGGAGCTCTCCAAAATGTTCTCCCAGCTCAACAAAAGAATTAGGGGAGA HS_haplotype2 CTGGGCTGCCCAGGAGCTCTCCAAAATGTTCTCCCAGCTCAACAAAAGAATTAGGGGAGA ************************************************************ HS_haplotype1 CTGTTAATGAAGAGGTGTTGGTCTTCACAAAGGGTAATTCATTTGTTGAGCTTAACTTAT HS_assemblymutate CTGTTAATGAAGAGGTGTTGGTCTTCACAAAGGGTAATTCATTTGTTGAGCTTAACTTAT HS_haplotype2 CTGTTAATGAAGAGGTGTTGGTCTTCACAAAGGGTAATTCATTTGTTGAGCTTAACTTAT ************************************************************ HS_haplotype1 TTGTTGAATTTTTGTTTATAGATTCTCTACTGTGTCTCTCCCTAAGTCCACCTGAGTAGA HS_assemblymutate TTGTTTAATTTTTGTTTATAGATTCTCTACTGTGTCTCTCCCAAAGTCCACCTGAGTAGA HS_haplotype2 TTGTTTAATTTTTGTTTATAGATTCTCTACTGTGTCTCTCCCAAAGTCCACCTGAGTAGA ***** ************************************ ***************** HS_haplotype1 AAAGAAAGAGGAACCCAGTTTGTTTTTAGTATTTTTGGAGGAGGAAGCAGAGGCATCATC HS_assemblymutate AAAGAAAGAGGAACCCAGTTTGTTTTTAGTATTTTTGGAGGAGGAAGCAGAGGCATCATC HS_haplotype2 AAAGAAAGAGGAACCCAGTTTGTTTTTAGTATTTTTGGAGGAGGAAGCAGAGGCATCATC ************************************************************ HS_haplotype1 ACGGTTTTGGTAACCACAACAGTTTACACATCATGCTTCCCTTCCTCCTGACCTCCACCA HS_assemblymutate ACGGTTTTGGTAACCACAACAGTTTACACATCATGCTTCCCTTCCTCCTGACCTCCACCA HS_haplotype2 ACGGTTTTGGTAACCACAACAGTTTACACATCATGCTTCCCTTCCTCCTGACCTCCACCA ************************************************************ HS_haplotype1 TGCCAGAGGAAGACTTACTCAGGAAGAAAAGACATTCTTCAGTTTTGTTTGTTCCATTGT HS_assemblymutate TGCCAGAGGAAGACTTACTCAGGAAGAAAAGACATTCTTCAGTTTTGTTTGTTCCACTGT HS_haplotype2 TGCCAGAGGAAGACTTACTCAGGAAGAAAAGACATTCTTCAGTTTTGTTTGTTCCACTGT ******************************************************** *** HS_haplotype1 TTAAAGTGTTGCCAGGTGGGGAGGTAAAAAGAAAGATCACTGTAGCGCGGTAGTGATTCT HS_assemblymutate TTGAAGTGTAGCCAGGTGGGGAGGTAAAAAGAAAGATCGCTGTAGCGCGGTAGTTATTCT HS_haplotype2 TTGAAGTGTAGCCAGGTGGGGAGGTAAAAAGAAAGATCGCTGTAGCGCGGTAGTTATTCT ** ****** **************************** *************** ***** HS_haplotype1 AAAACAGTAGGAGAAAGCTGAGACAAAATACAGTGATCAAGAACCCTTCGGCCCCAAGGT HS_assemblymutate AAAACAGTAGGAGAAAGCTGAGACAAAATACAGTGATCAACAACCCTTCGGCCCCAAGGT HS_haplotype2 AAAACAGTAGGAGAAAGCTGAGACAAAATACAGTGATCAACAACCCTTCGGCCCCAAGGT **************************************** ******************* HS_haplotype1 CACCCAAGGTAATAACCCTCGTAATCCTGTTGATGGCTGTAGTCCAGACTCCACATAGAT HS_assemblymutate CACCCAAGGTAATAACCCTCGTAATCCTGTTGATGGCTGTAGTCCAGACTCCACATAGAT HS_haplotype2 CACCCAAGGTAATAACCCTCGTAATCCTGTTGATGGCTGTAGTCCAGACTCCACATAGAT ************************************************************ HS_haplotype1 GAAGGAAGAAGAGACCTGCCTTTTGTAGCCGGGCTGCATTATCTTCATTTACATCTATGG HS_assemblymutate GAAGGAAGAAGAGACCTGCCTTTTGTAGCCGGGCTGCATTATCTTCATTTACATCTATGG HS_haplotype2 GAAGGAAGAAGAGACCTGCCTTTTGTAGCCGGGCTGCATTATCTTCATTTACATCTATGG ************************************************************ HS_haplotype1 GAACAGATAGACCTTCGAGAGCCTCAGCCCTTTGGGCTCCCTGCCTCCTCTCTTTGCTCT HS_assemblymutate GAACAGATAGACCTTCGAGAGCCTCAGCCCTTTGGGCTCCCTGCCTCCTCTCTTTGCTCT HS_haplotype2 GAAAAGAGAGACCTTCGAGAGCCTCAGCCCTTTGGGCTCCCTGCCTCCTCTCTTTGCCCT *** *** ************************************************* ** HS_haplotype1 GAATTTTTCACCTAAAGCGGC----------CGCTGCCCAGGCGTTGCTGTGGACCCAGT HS_assemblymutate GAATTTTTCACCAAAAGCGGCCACTGGGCTGCGCTGCCCAGGCGTTGCTGTGGGCCCAGT HS_haplotype2 GAATTTTTCACCAAAAGCGGC----------CGCTGCCCAGGCGTTGCTGTGGGCCCAGT ************ ******** ********************** ****** HS_haplotype1 TAAGACCATCTGTGCGCAGACTGAGTAAATAAAGGGCTGGCTGAAAAGACACATGTGCTG HS_assemblymutate TAAGACCATCTGTGCGCAGACTTAGTAAATAAAGGGCTGGCTGAAAAGACACATGTGCTG HS_haplotype2 TAAGACCATCTGTGCGCAGACTTAGTAAATAAAGGGCTGGCTGAAAAGACACATGTGCTG ********************** ************************************* HS_haplotype1 GCCCTCACTGCAATTTTTGGGCTCTGCCTCATTACCAGACGCCTGTAAAGAGTGAGAGAT HS_assemblymutate GCCCTCACTGCAATTTTTGGGCTCTGCCTGATTACCAGACGCCTGTAAAGAGTGTGAGAT HS_haplotype2 GCCCTCACTGCAATTTTTGGGCTCTGCCTGATTACCAGACGCTTGTAAAGAGTGTGAGAT ***************************** ************ *********** ***** HS_haplotype1 GAGAAGGTAAGCTAATCTGAACAAAAATTAAGGCACCAAGTCTTAGTTGTCTTTGCTTTC HS_assemblymutate GAGAAGGTAAGCTACTCTGAACAAAAATTAAGGCACCAAGTTTTAGTTGTCTTTGCTTTC HS_haplotype2 GAGAAGGTAAGCTACTCTGAACAAAAATTAAGGCACCAAGTTTTAGTTGTCTTTGCTTTC ************** ************************** ****************** HS_haplotype1 CCTCACTGCTACTAAGTTGGCAGTAGAATTTCAAGAATCCAAACTGGATCATGGGATTGT HS_assemblymutate CCTCACTGCTACTAAGTTGGCAGTAGAATTTTAAGAATCCAAACTGGATCATGGGATTGT HS_haplotype2 CCTCACTGCTACTAAGTTGGCAGTAGAATTTTAAGAATCCAAACTGGATCATGGGATTGT ******************************* **************************** HS_haplotype1 CTGAGTCAGCATAGGAAGAGAGTGGTGAGCCTCCTGATTACAGACTTCAAAAATCCTAAA HS_assemblymutate CTGAGTCAGCATAGGAAGAGAGTGGTGAGCCTCCTGATTACAGACTTCAAAAATCCTAAA HS_haplotype2 CTGAGTCAGCATAGGAAGAGAGTGGTGAGCCTCCTGATTACAGACTTCAAAAATCCTAAA ************************************************************ HS_haplotype1 ATGCCCATCAAAGATGATTGCTTCCCATTCTGTCCTAGGACTCAAAGGATGGGAGGCAGG HS_assemblymutate ATGCCCATCAAAGATGATTGCTTCCCTTTCTGTCCTAGGACTCAAAGGATGGGAGGCAGG HS_haplotype2 ATGCCCATCAAAGATGATTGCTTCCCTTTCTGTCCTAGGACTCAAAGGATGGGAGGCAGG ************************** ********************************* HS_haplotype1 GAAAAGAATGCCTGAGACTCAGTACATTAGTACTATTAGCTGCACATTGAGGATGGAAAA HS_assemblymutate GAAAAGAATGCCTGAGACTCAGTACATTAGTACTATTAGCTGCACATTGAGGATGGAAAA HS_haplotype2 GAAAAGAATGCCTGAGACTCAGTACATTAGTACTATTAGCTGCACATTGAGGATGGAAAA ************************************************************ HS_haplotype1 TTCTAGCCATGCCAGACATAAACCAATCATGCTAATATGCCGCTCCCAGGCCGTCGGAAA HS_assemblymutate TTCTAGCCATGCCAGACATAAACCAATCATGCTAATATGCCGCTCCCAGGCCGTCGGAAA HS_haplotype2 TTCTAGCCATGCCAGACATAAACCAATCATGCTAATATGCTGCTCCCAGGCCGTCGGAAA **************************************** ******************* HS_haplotype1 GACTATAGGTGTTATCCCTGTATGGGAGAGTTCCTCAACGTAGGCAAGCTGTGACCATTT HS_assemblymutate GACTATAGGTGTTATCTCTGTATGGTAGAGTTCCTCAACGTAGGCAAGCTGTGACCATTT HS_haplotype2 GACTATAGGTGTTATCTCTGTATGGTAGAGTTCCTCAACGTAGGCAAGCTGTGACCATTT **************** ******** ********************************** HS_haplotype1 AGTATTTTCCTGTAACTTAGCAGTAGCCAGGATTCTCCCATCAATTAAATACAAAAAATC HS_assemblymutate AGTATTTTCCTGGAACTTAGCAGTAGCCAGGATTCTCCCATCAATTAAATACAAAAAATC HS_haplotype2 AGTATTTTCCTGGAACTTAGCAGTAGCCAGGATTCTCCCATCAATTAAATACAAAAAATC ************ *********************************************** HS_haplotype1 ACCATGGTGATGTTGTTCTGTTAGTATAATGGTGAAATGTGAGGCAGGGCTAGGTCTGCG HS_assemblymutate ACCATGGTGATGTTGTTCTGTTAGTATAATGGTGAAATGTGAGGCAGGGCTAGGTCTGCG HS_haplotype2 ACCATGGTGATGTTGTTCTGTTAGTATAATGGTGAAATGTGAGGCAGGGCTAGGTCTGTG ********************************************************** * HS_haplotype1 ATTATGTGCGCAGCCAATTTTGTATAAATGCAAGATTAAAAAGACATTTTTCTCTATTTC HS_assemblymutate ATTATGTGCGCAGCCAATTTTGTATAAATGCAAGATTAAAAAGACATTTTTCTCTATTTC HS_haplotype2 ATTATGTGCGCAGCCAATTTTGTATAAATGCAAGATTAAAAAGACATTTTTCTCTATTTC ************************************************************ HS_haplotype1 CTGGCCCTGTCCTAGCCTCAGCCCCGTCTGTATCCTTCCCTCAGTGGAGGCCGAGACAAA HS_assemblymutate CTGGCCCTGTCCTAGCCTCAGCCCCGTCTGTATCCTTCCCTCAGTGGAGGCCGAGACAAA HS_haplotype2 CTGGCCCTGTCCTAGCCTCAGCCCCGTCTGTATCCTTCCCTCAGTGGAGGCCGAGACAAA ************************************************************ HS_haplotype1 CAAATATCAACGTAACCCTCCATCAGAGAGAATATGATTGCACGGCACCACGCTAATAAC HS_assemblymutate CAAATCTCAACGTAACCCTCCATCAGAGAGAATATGATTGCACGGCACCACGCTAATAAC HS_haplotype2 CAAATCTCAACGTAACCCTCCTTCAGAGAGAATATGATTGCACGGCACCACGCTAATAAC ***** *************** ************************************** HS_haplotype1 TTAACGGAGCGTGGGGGAGGCGTGCCACTGCAGTCCCATCTAGGGTTCATCACCGGGCCT HS_assemblymutate TTAACGGAGCGTGGGGGAGGCGTGCCACTGCAGTCCCATCTAGGGTTCATCACCGGGCCT HS_haplotype2 TTAACGGAGCGTGGGGGAGGCGTCCCACTGCAGTCCCATCTAGGGTTCATCACAGGGCCT *********************** ***************************** ****** HS_haplotype1 GGCAGCCCAGCTACTTAATACCTTAGGATGGTAGGGAAGCGGGTCGTGAGATGAATGCAC HS_assemblymutate GGCAGCCCAGCTACTTAATACCTTAGGATGGTAGGGAAGCGGGTCGTGAGATGAATGCAC HS_haplotype2 GGCAGCCCAGCTACTTAATACCTCAGGATGGTAGGGAAGCGGGTCGTGAGATGAATGCAC *********************** ************************************ HS_haplotype1 TTTAAAAATGGCCAGGCTGGGCACCGGTTATTTGTATTTAGAGATATTACACTAGCATAC HS_assemblymutate TTTAAAAATGGCCAGGCTGGGCACCGGTTATTTGTATTTAGAGATATTACACTAGCATAC HS_haplotype2 TTTAAAAATGGCCTGGCTGGGCACCGGTTATTTGTATTTAGAGATATTACACTAGCATCC ************* ******************************************** * HS_haplotype1 ACAATAAATGTGTGTAACCTCTGCCGAGTCGCCCGCCTGGGGCCTAAAGAAACTAGCTGT HS_assemblymutate ACAATAAATGTGTGTAACCTCTGCCGAGTCGCCCGCCTGGGGCCCAAAGAAACTAGCTTT HS_haplotype2 ACAATAAATGTGTGTAACCTCTGCCGAGTCGCCCGCCTGGGGCCCAAAGAAACTAGCTTT ******************************************** ************* * HS_haplotype1 CCTTCGCTCGCGCGTTTCCAGATGGTGAGGAGCTGTTCCTCTTCCATTTTTGTAGCCATA HS_assemblymutate CCTTCGCTCGCGCGTTCCCAGATGGTGAGGAGCTGTGCCTCTTCCATTTTTGTAGCCATA HS_haplotype2 CCTTCGCTCGCGCGTTCCCAGATGGTGAGGAGCTGTGCCTCTTCCATTTTTGTAGCCATA **************** ******************* *********************** HS_haplotype1 CATAGAATTTAGATGCTGAGGAGGGACGCCCCATTAATGGAGCCTGGAGCCTCTCTCCTC HS_assemblymutate CATAGAATTTGGATGCTGAGGAGGGACGCCTCATTAATGGAGCCTGGAGCCTCTCTCCTC HS_haplotype2 CATAGAATTTGGATGCTGAGGAGGGACGCCTCATTAATGGAGCCTGGAGCCTCTCTCCTC ********** ******************* ***************************** HS_haplotype1 CCAGGCAGCCTCCGCCAGGCCTTGGAGATGAAATTGCTTGTGTAAACGACTGTTGCAGGA HS_assemblymutate CCAGGCAGCCTCCGCCAGGCCTTGGAGATGAAATTGCTTGTGTAAACGACTGTTGCAGGA HS_haplotype2 CCAGGCAGCCTCCGCCAGGCCTTGGAGATGAAATTGCTTGTGTAAACGACTGTTGCTGGA ******************************************************** *** HS_haplotype1 ACACCAAGTATTTTCGTTAAGGAACCCCAACCTGGGTGACACAAGATTCTCGCTTGTATT HS_assemblymutate ACACCAAGTATTTTCGTTAAGGAACCCCAACCTGGGTGACACAAGATTCTCGCTTGTATT HS_haplotype2 ACACCAAGTATTTTCGTTAAGGAACCCCAGCCTGGGTGACACTAGATTCTCGCTTGTGTT ***************************** ************ ************** ** HS_haplotype1 TTTAAAAAACAAAAAAATTTTGAGTATATATCCCTTGGTGAAGAAAGCTTGTTTGTCCAG HS_assemblymutate TTTAAAAAACAAAAAAATTTTGAGTATATATCCCTTGGTGAAGAAAGCTTGTTTGTCCAG HS_haplotype2 TTTAAAAAACAAAAAAATTTTGAGTATATATCCCTTGGTGAAGAAAGCTTGTTTGTCCAG ************************************************************ HS_haplotype1 AGCACATCTACAGCAGGGGCTTATATCTTTTCATCTTCAATGACTTCCTGCCTGTGTACC HS_assemblymutate AGCACATCTACAGCAGGGGCTTATATCTTTTCATCTTCAATGACTTCCTGCCTGTGTACC HS_haplotype2 AGCACAGCTACAGCAGGGGCTTATATCTTTTCATCTTCAATGACTTCCTGCCTGTGTACC ****** ***************************************************** HS_haplotype1 TCTGTAGACCAGGCCCATCTCAGGGAGATCATAATTGGGAAAAGATCGAGTTCCACATGG HS_assemblymutate TCTGTAGACCAGGCCCATCTCAGGGAGATCATTATTGTGAAAAGATCGAGTTCCACATGG HS_haplotype2 TCTGTAGACCAGGCCCATCTCAGGGAGATCATTATTGTGAAAAGATCGAGTTCCACATGG ******************************** **** ********************** HS_haplotype1 TGTGTCAGGCTACTTGAGATCTATGGTCTTGCCAGGATGAATTTGGGTGGCAATCTAACA HS_assemblymutate TGTGTCAGGCTACTTGAGATCTATGGTCTTGCCAGGATGAATTTGGGTGGCAATCTAACA HS_haplotype2 TGTGTCAGGCTACTTGAGATCTATGGTCTTGCCAGGATGAATTTGGGTGGCAATCTAACA ************************************************************ HS_haplotype1 AAAATTAAAACTCCCAGCAACAATTTCTGGAGGTCATTGTGGGACTTGTGGTCTCTGGTC HS_assemblymutate AAAATTAAAACTCCCAGCAACAATTTCTGGAGGTCATTGTGGGACTTGTGGTCTCTGGTC HS_haplotype2 AAAATTAAAACTCCCAGCAACAATTTCTGGAGGTCATTGTGGGACTTGTGGTCTCTGGTC ************************************************************ HS_haplotype1 GCTTCCAATGATATTCATCCACTGCAGTGGTAAATTCTCAAGCGATTCTTCTGAATTTGC HS_assemblymutate GCTTCCAATGATATTCAACCACTGCAGTGGTAAATTCTCAAGCGATTCTTCTGAATTTGC HS_haplotype2 GCTTCCAATGATATTCAACCACTGCAGTGGTAAATTCTCAAGCGATTCTTCTGAATTTGC ***************** ****************************************** HS_haplotype1 AGTGTATGAACAGATGTAATCCCCCGTCCAGTGGTTTTTAGTATTTACTGGAAGCCGGGC HS_assemblymutate AGTGTATGAACAGATGTAATCCCCCGTCCAGTGGTTTTTAGTATTTACTGGAAGCCGGGC HS_haplotype2 AGTGTATGAACAGATGTAATCCCCCGTACAGTGGTTTTTAGTATTTACTGGAAGCCGGGC *************************** ******************************** HS_haplotype1 GAGCAAAGCAACACACAACCAGCCTCTACATTTTACTCTGGCTTTTGTATTTTAAGGGTT HS_assemblymutate GAGCAAAGCAACACACAACCAGCCTCTACATTTTACTCTGGCTTTTGTATTTAACGGGTT HS_haplotype2 GAGCAAAGCAACACACAACCAGCCTCTACATTTTACTCTGGCTTTTGTATTTAACGGGTT **************************************************** * ***** HS_haplotype1 TACTGCTTTACATTCTGCCTCCGTCTTAACTAGTAAATATGAAAATGGAACATGAGCTTT HS_assemblymutate TACTGCTTTACATTCTGCCTCCGTCTTAACTAGTAAATATGACAATAGAACATGAGCTTT HS_haplotype2 TACTGCTTTAAATTCTGCCTCCGTCTTAACTAGTAAATATGACAATAGAACATGAGCTTT ********** ******************************* *** ************* HS_haplotype1 CAACACGGAATCACAAGAGAAGTTAACAAACCATTTTTTCTACTCTCCCAGCTCAGCCTG HS_assemblymutate CAACACGGAATCACAAGAGAAGTTAACAAACCATTTTTTCTACTCTCCCAGCTCAGCCTG HS_haplotype2 CAACACGGAATCACAAGAGAAGTTAACAAACCATTTTTTCTACTCTCCCAGCTCAGCCTG ************************************************************ HS_haplotype1 TAGCTGGTGAAAAAACAGCACATTAAGAATGTAAGTGACCAAAAGACCCTCTTCAGTAGC HS_assemblymutate TAGCTGGTGAAAAAACAGCACATCAAGAATGTAAGTGACCAAAAGACCCTCTTCTGTAGC HS_haplotype2 TAGCTGGTGAAAAAACAGCACATCAAGAATGTAAGTGACCAAAAGACCCTCTTCTGTAGC *********************** ****************************** ***** HS_haplotype1 GATCTAACTTTTAGAAGCACTCTCATCTGGACAGTGAAGGCTGGTTCCAGACGGAGTGCT HS_assemblymutate GAACTAACTTTTAGAAGCACTCTCATCTGGACAGTGAAGGCTGGCTCCAGACGGAGTGCT HS_haplotype2 GAACTAACTTTTAGAAGCACTCTCATCTGGACAGTGAAGGCTGGCTCCAGACGGAGTGCT ** ***************************************** *************** HS_haplotype1 GAGAATCCCCTGTCCTAGGTCAGGTGCCTCCTAGGTGAAAATATGTGTGATACAACAGAT HS_assemblymutate GAGAATCCCCTGTCCTAGGTCAGGTGCCTCCTAGGTGAAAATATGTGTGATACAACAGAT HS_haplotype2 GAGAATCCCCTGTCCTAGGTCAGGTGCCTCCTAGGTGAAAATATGTGTGATACAACAGAT ************************************************************ HS_haplotype1 GAAATAGGGTAGCTACTCTTCTACATTTGCAATTGAGAAGACTCTTTCCTTAGGTATCAT HS_assemblymutate GAAATAGGGTAGCTACTCTTCTACATTTGCAATTGAGAAGACTCCTTCCTTAGGTATCAT HS_haplotype2 GAAATAGGGTAGCTACTCTTCTACATTTGCAATTGAGAAGACTCCTTCCTTAGGTATCAT ******************************************** *************** HS_haplotype1 TGGTCCCCAGCCTGTTGGTACTGATGGACCGGGGTGTGTGTATTTTAACTCCTGTAAACA HS_assemblymutate TGGTCCCCAACCTGTTGGGACTGATGGACCGGGGTGTGTGTATTTTAACTCCTGTATACA HS_haplotype2 TGGTCCCCAACCTGTTGGGACTGATGGACCGGGGTGTGTGTATTTTAACTCCTGTATACA ********* ******** ************************************* *** HS_haplotype1 ACCATAATATTCAGCTCTAGGAATTCATGTTGCCAGCCTCTCCTCAGGGCAGGTGCCATT HS_assemblymutate ACCATAATATTCAGCTCTAGAAATTCATGTTGCCAGCCTCTCCTCAGGGCAGGTGCCATT HS_haplotype2 ACCATAATATTCAGCTCTAGAAATTCAGGTTGCCAGCCTCTCCTCAGGGCAGGTGCCATT ******************** ****** ******************************** HS_haplotype1 TATAGTTGCCCTGTAGAGAAGTCTGGGTGACATATTAGACCTCACCTTACACCAATACTA HS_assemblymutate TATAGTTGCCCTGTAGAGAAG-TTGGGTGACATATTAGACCTCACCTTACACCAATACTA HS_haplotype2 TATAGTTGCCCTGTAGAGAAGGTTGGGTGACATATTAGACCTCACCTTACACCAATACTA ********************* ************************************* HS_haplotype1 TGACAATGAAAAAGCAGAGAAACACTCTTAGCGTGTTTGGCAGATTCAAAGACGGAAGGA HS_assemblymutate TGACAATGAAAAAGCAGAGAAACACTCTTAGCGTGTTTGGCAGATTCAAAGACGGAAGGA HS_haplotype2 TGACAATGAAAAAGCAGAGAAACACTCTTAGCGTGTTTGGCAGATTCAAAGACGGAAGGA ************************************************************ HS_haplotype1 AAAGACTACAAATAAGAATTCCAGGAGTTCAGAAAGTCCAACGACTGTCCCTTTGTCCTT HS_assemblymutate AAAGACTACAAATAAGAATCCCAGGAGTTCAGAAAGTCCAAAGACTGTCTCTTTGTCCTT HS_haplotype2 AAAGACTACAAATAAGAATCCCAGGAGTTCAGAAAGTCCAAAGACTGTCTCTTTGTCCTT ******************* ********************* ******* ********** HS_haplotype1 ATATATTTTAAAGAAAGCGCGGCATTTCACATGATAATCACAGGACAACTAACCAGATGG HS_assemblymutate ATATATTTTAAAGAAAGCGCGGCATTTCACATGATAATCACAGGACAACTAACCAGTTGG HS_haplotype2 ATATATTTTAAAGAAAGCGCGGCATTTCACATGATAATCACAGGACAACTAACCAGTTGG ******************************************************** *** HS_haplotype1 GGCAGATAAAGAAGGGAAACGTTATTGTATTTAGCTACGTGCCAGAGGAAAAGCAGCTCA HS_assemblymutate GGCAGATAAAGAAGGGAAACGTTATTGTATTTAGCTACGTGCCAGAGGAAAAGCAGCTCA HS_haplotype2 GGCAGATAAAGAAGGGAAACGTTATTGTATTTAGCTACGTGCCAGAGGAAAAGCAGCTCA ************************************************************ HS_haplotype1 CTGATGTGCCACTGCCCAGGGTAAGAAAATTAAGGTCAGGACACGCTGCAGCTCTCCAAA HS_assemblymutate CTGATGTGCCACTGCCCAGGGTAAGAAAATTAAGGTCAGGACACGCTGCAGCTCTCCAAA HS_haplotype2 CTGATGTGCCACTGCCCAGGGTAAGAAAATTAAGGTCAGGACACTCTGCAGCTCTCCAAA ******************************************** *************** HS_haplotype1 TGACTATAGCCTTTTCCTTCAGAAGGCAATCCAGTCATCCGCGCCGGGCCCTGAGTGGTG HS_assemblymutate TGACTATAGCCTTTTCCTTCAGAAGGCAATCCAGTCATCCGCGCCGGGCCCTGAGTGGTG HS_haplotype2 TGACTATAGCCTTTTCCTTCAGAAGGCAATCCAGTCATCCGCGCCGGGCCCTGGGTGGTG ***************************************************** ****** HS_haplotype1 AGGTGATACTGCATGAAGACAGGCCTCCAAGGCTGCTGTGTGTCTAGATAAAAGTTACTT HS_assemblymutate AGGTGATACTGCATGAAGACAGGCCTCCAAGGCTGCTGTGTGTCTAGATAAAAGTTACTT HS_haplotype2 AGGTGATACTGCATGAAGACTGGCCTCCAAGGCTGCTGTGTGTCTAGATAAAAGTTACTT ******************** *************************************** HS_haplotype1 ACGCATACCAAAGAAATTAGCCGCTGCCTCCAGCGAGGGAACCTGCCTCACCTCTGTTCA HS_assemblymutate ACGCATACCAAAGAAATTAGCCGCTGCCTCCAGCGAGGCAACCTGCCTCACCTCTGTTCA HS_haplotype2 ACGCATACCAAAGAAATTAGCCGCTGCCTCCAGCGAGGCAACCTGCCTCACCTCTGTTCA ************************************** ********************* HS_haplotype1 ACGCTATGGCTGCCTGGCAAGCTTGCAGGGCAGCGGATAGTCTTCCCCTCCTGGACTGAT HS_assemblymutate ACGCTATGGCTGCCTGGCAAGCTTGCAGGGCAGCGGATAGTCTTCCCCTCCTGGACTGAT HS_haplotype2 ATGCTATGGCTGCCTGGCAAGCTTGCAGGGCAGCGGATAGTCTTCCCCTCCTGGACTGAT * ********************************************************** HS_haplotype1 GGGAGACCACCCAGGGTGGGAACAGAAGAAATATCAATTACGTTCATCAAGGGTACTATG HS_assemblymutate GGGAGACCACCCAGGGTGGGAACAGAAGAAATATCAATTACGTTCATCAAGGGTACTATG HS_haplotype2 GGGAGACCACCCAGGGTGGGAACAGAAGAAATATTAATTACGTTCATCAAGGGTACTATG ********************************** ************************* HS_haplotype1 TTAAAGGAAATGTGTTTTAGGAGGACCCGGACAAACATGTTGTGTCTCGCTTTTTTCATA HS_assemblymutate TTAAAGGAAATGTGTTTTAGGAGGACCCGGACAAACATGTTGTGTCTCGCTTTTTTCATA HS_haplotype2 TTAAAGGAAATGTGTTTTAGGAGGACCCGGACAAACATGTTGTTTCTCGCTTTTTTCATA ******************************************* **************** HS_haplotype1 CAAATGAGATCTAGAGTACTTGGCTCCACACCAACCAGATTTAAGAAAAAGAGCACAACA HS_assemblymutate CAAATGAGATCTAGAGTACTTGGCTCCACACCAACCAGATTTAAGAAAAAGAGCACAACA HS_haplotype2 CAAATGAGATCTAGACTACTTGGCTCCACACCAACCAGATTTAAGAAAAAGAGCACAACA *************** ******************************************** HS_haplotype1 ACTACAAATCTCGCTCCCCTCAAAGATTCTTCCCCAGCCATGTTGTTGGGTGGGGAGGAA HS_assemblymutate ACTACAAATCTCGCTCCCCTCAAAGATTCTTCCCCAGCCATGTTGTTGGGTGGGGAGGAA HS_haplotype2 ACTACAAATCTCGCTCCCCTCAAAGATTCTTCCCCGGCCATGTTGTTGGGTGGGGAGGAA *********************************** ************************ HS_haplotype1 GATAGATACTGCAATTGGGGGCAAAGCCAGGATTCCTGTTTGGGGACCCATCAAACTCAA HS_assemblymutate GATAGATACTGCAATTGGGGGCAAAGCCAGGATTCCTGTTTGGGGACCCATCAAACTCAA HS_haplotype2 GATAGATACTGCAATTGGGGGCAAAGCCAGGATTCCTGTTTGGGGACCCATCAAACTCAA ************************************************************ HS_haplotype1 TACAAGGTCATTAGCTGAGGTGAATGACAGCCTCCCTGGATTACAACGTGGGTCAATGAA HS_assemblymutate TACAAGGTCATTAGCTGAGGTGAATGACTGCCTCCCTGGATTACAACGTGGGTCAATGAA HS_haplotype2 TACAAGGTCATTAGCTGAGGTGAATGACTGCCTCCCTGGATTACAACGTGGGTCAATGAA **************************** ******************************* HS_haplotype1 AATTATTTGGTCTTCATACCTCATCTGTGTAAGCTTCAAACCACTGCTTGTATAGGAGTT HS_assemblymutate AATTTTTTGGTCTTCATACCTCATCTGTGTAAGCTTCAAACCTCTGCTTGTATAGGAGTT HS_haplotype2 AATTTTTTGGTCTTCATACCTCATCTGTGTAAGCTTCAAACCTCTGCTTGTATAGGAGTT **** ************************************* ***************** HS_haplotype1 CACTTAGCGGGCGGAATCCCTCCCTGTCCCTTAAGGGAGAATTGAAGGCCCTCAGGTACT HS_assemblymutate CACTTAGCGGCCGGAATCCCTCCCTGTCCCTTCAGGGAGAATTGCAGGCCCTCAGGTACT HS_haplotype2 CACTTAGCGGCCGGAATCCCTCCCTGTCCCTTCAGGGAGAATTGCAGGCCCTCAGGTACT ********** ********************* *********** *************** HS_haplotype1 GGGTCTCATCGTGCAGTAGCTGAGGGGCCAGATCCAACGTCCGTCCCCTCAGGTTTGCAC HS_assemblymutate GGGTCTCATCATGCAGTAGCTGAGGGGCCAGATCCAACGTCCGTCCCCTCAGGTTTGCAC HS_haplotype2 GGGTCTCATCATGCAGTAGCTGAGGGGCCAGATCCAACGTCCGTCCCCTCAGGTGTGCAC ********** ******************************************* ***** HS_haplotype1 TAAACAAGGAGAGGTGGCTGAGTTGTATGATCTTTCCGCTGAGCCATCTCAA--ATTCGA HS_assemblymutate TAAACAAGGAGAGGTGGCTGAGTTGTATGATCTTTCCGCTGAGCCATCTCAATTATTCGA HS_haplotype2 TAAACAAGGAGAGGTGGCTGAGTTGTATGATCTTTCCGCTGAGCCATCTCAA--ATACGA **************************************************** ** *** HS_haplotype1 ACCCAGGGACAGAAACCAGCTGAATTCTTTGAAAGCAAGAGGACCCACGCCGGCATTAAA HS_assemblymutate ACCCAGGGACAGAAACCAGCTGAATTCTTTGAAAGCAAGAGGACCCACGCCGGCATTAAA HS_haplotype2 ACCCAGGGACAGAAACCAGCTGAATTCTTTGAAAGCAAGAGGACCCACGCCGGCATTAAA ************************************************************ HS_haplotype1 AATTTGACATGTGGGAGATGCATTGACTGCTGGGCTAAGAAATAATAAAAATGCAGCTCA HS_assemblymutate AATTTGACATGTGGGAGATGCATTGACTCCTGGGCTAAGAAATAATAAAAATGCAGCTCA HS_haplotype2 AATTTGACATGTGGGAGATGCATTGACTCCTGGGCTAAGAAATAATAAAAATGCAGCTCA **************************** ******************************* HS_haplotype1 CCGCTTCGCTCACGGAGCTGACCAAGAGCTCCAATTCAAGAAGACCCAGGCAGTGAGCCC HS_assemblymutate CCGCTTCGCTCACGGAGCTGACCAAGAGCTCCAATTCAAGAAGACCCAGGCAGTGAGCCC HS_haplotype2 CCGCTTCGCTCACGGAGCTGACCAAGAGCTCCAATTCAAGAAGGCCCAGGCAGTGAGCCC ******************************************* **************** HS_haplotype1 AGCCCCCCAGCTCCGTCGTGGAGAAGGATGATTATCTCCTCCCTGGGGTGGCTCTCCAGG HS_assemblymutate AGCCCCCCAGCTCCGTCGTGGAGAAGGATGATTATCTCCTCCCTGGGGTGGCTCTCCAGG HS_haplotype2 AGCCCCCCAGCTCCCTCGTGGAGAAGGATGCTTATCTCCTCCCTGGGGTGGCTCTCCAGG ************** *************** ***************************** HS_haplotype1 CATTTATTCCGTGTTATACTTTGGCTTAAACCCGGGCGCAGGTCTCAATCATCAATGCTA HS_assemblymutate CATTTATTCCGTGTTATACTTTGGCTTAAACCCGGGCGCAGGTCTCAATCATCAATGCTA HS_haplotype2 CATTTATTCCGTTTTATACTTTGGCTTAAACCCGGGCGCAGGTCTCAATCATCAATGCTA ************ *********************************************** HS_haplotype1 TAGATCACATGGATTACAGATTGGATCTCTGTAGAGGCAGCCACCCGATTACAGAAACAT HS_assemblymutate TAGATCACATGGATTACAGATTGGATCTCTGTAGAGGCAGCCACCCGATTACAGAAACAT HS_haplotype2 TAGATCACATGGATTACAGATTGGATCTCTGTAGAGGCAGCCACCCGATTGCAGAAACAT ************************************************** ********* HS_haplotype1 CTCAGAAGTCTTAAAGGCCCTGTCCTACAATAGGGTTCAGACACAGAGCATTGTTTTAAG HS_assemblymutate CTCAGAAGTCTTAAAGGCCCTGTCCTACAATAGGGTTCAGACACAGAGCATTGTTTTAAG HS_haplotype2 CTCAGAAGTCTTAAAGGCCCTGTCCTACTATAGGGTTCAGAAACAGAGCATTGTTTTAAG **************************** ************ ****************** HS_haplotype1 GACTGCATTTTCAACTCATCTTTTCTTCAGGTCCAGTCAATGCACCGATCATAGCCTGAG HS_assemblymutate GACTGCATTTTCAACTCATCTTTTCTTCAGGTCCAGTCAATGCACCGATCATAGCCTGAG HS_haplotype2 GACTGCATTTTCAACTCATCTTTTCTTCAGGTCCAGTCAATGCACCGATCATAGCCTGAG ************************************************************ HS_haplotype1 CAGATATAAACATAGTTATAATAAGGGTCTAGGGTTTGAGATTTTAAACAATTTACATGC HS_assemblymutate CAGATATAAACATAGTTATAATAAGGGTCTAGGGTTTGAGATTTTAAACAATTTACATGC HS_haplotype2 CAGATATAAACATAGTTATAATAAGGGTCTAGGGTTTGAGATTTTAAACAATTTACATGC ************************************************************ HS_haplotype1 TCCTGGAAAATTTTTTCTGACAGAGAGATCAGCTAAATCCCGGGCACAAAGCACCTGAGT HS_assemblymutate TCCTGGAAAATTTTTTCTGACAGAGAGATCAGCTAAATCCCGGGCACAAAGCACCTGAGT HS_haplotype2 TCCTGGAAAATTTTTTCTGACAGAGAGATCAGCTAAATCCCGGGCACAAAGCACCTGAGT ************************************************************ HS_haplotype1 TTTCCCTATCTTGCTTTGAGTTATTGTCACCTCACAACAGGCTGCTCGTCGAGGTGCCAG HS_assemblymutate TTTCCCTATCTTGCTTTGAGTTATTGTCACCTCACAACAGGCTGCTCGTCGAGGTGCCAG HS_haplotype2 TTTCCCTATCTTGCTTTGAGTTATTGTAACCTCACAACAGGCTGCTCGTCCAGGTGCCAG *************************** ********************** ********* HS_haplotype1 GAATCCATCTTTGGTGAGGGAGTTCAAAGCTTTGGGGTATATGGAGTATGACCAGATCCT HS_assemblymutate GAATCCATCTTTGGTGAGGGAGTTCAAAGCTTTGGGGTATATGGAGTATGACCAGATCCT HS_haplotype2 GAATCCATCTTTGGTGAGGGAGTTCAAAGCTTTGGGGTATATGGAGTATGACCAGATCCT ************************************************************ HS_haplotype1 GGTCAGAAAAAATATTATTTGTGATGGCTTGGTGCACATTTATGTAATTGCTGTAATACA HS_assemblymutate GGTCAGAAAAAATATGATTTGTGATGGCTTGGTGCACATATATGTAATTGCTGTACTACA HS_haplotype2 GGTCAGAAAAAATATGATTTGTGATGGCTTGGTGCACATATATGTAATTGCTGTACTACA *************** *********************** *************** **** HS_haplotype1 GGCTGCGAAATGAGAAGAAAGTCTCTGTGAGACCCTGAGCGCGAGGTAATTCGCTAGGCC HS_assemblymutate GGCTGCGAAATGAGAAGAAAGTCTCTGTGAGACCCTGAGCGCGAGGTAATTCGCTCGGCC HS_haplotype2 GGCTGCGAAATGAGAAGAAAGTCTCTGTGAGACCCTGAGCGCGAGGTAATTCGCTCGGCC ******************************************************* **** HS_haplotype1 CATGTAAACTATTCTTTGGTGGAGATGTACAGCTCACCCGCTGCCTTTGCTCAAGGAAAA HS_assemblymutate CATGTAAACTATTCTTTGGTGGAGATGTACAGCTCACCCGCGGCCTTTGCTCAAGGAAAA HS_haplotype2 CATGTAAACTATTCTTTGGTGGAGATGTACAGCTCACCCGCGGCCTTTGCTCAAGGAAAA ***************************************** ****************** HS_haplotype1 ATCCACTATTCAAGTCATAATACAATTTCTGGAGGTTCTTCAGAGTTTACCAGCCCAGCT HS_assemblymutate ATCCACTATTCAAGTCATAATACAATTTCTGGAGGTTCTTCAGAGTTTACCAGCCCAGCT HS_haplotype2 ATCCACTATTCAAGTCATAATACAATTTCTGGAGGTTCTTCAGAGTTTACCAGCCGAGCT ******************************************************* **** HS_haplotype1 GTTTTAACTCTGCCATAACACTTCAAAAGCACGTTATGTAATATATACACTTCATCACCT HS_assemblymutate GTTTTAACTCTGCCATAACACTTCAAAAGCACGTTATGTAATATATACACTTCATCACCT HS_haplotype2 GTTTTAACTCTGCAATAACACTTCAAAAGCACGTTATGTAATATATACACTTCCCCACCT ************* *************************************** ***** HS_haplotype1 GGCTTGAATATTGAGGAGTTGGGGTGTCCGCCAACCCCATTCATTCTATATGTAAATGTT HS_assemblymutate GGCTTGAATATTGAGGAGTTGGGGTGTCCGCCAACCCCATTCATTCTATATGTAAATGTT HS_haplotype2 CGCTTGAATATTGAGGAGTTGGGGTGTCCGCCAACCCCATTCATTCTATATGTAAATGTT *********************************************************** HS_haplotype1 AACATTAACCAACCCCACTTATCTTCAGGGTGGCATAAAATACTCTATGTCTGGTAACCT HS_assemblymutate AACATTAACCAACCCCACTTATCTTCAGGGTGGCATAAAATACTCTATGTCTGGTAACCT HS_haplotype2 AACATTAACCAACCCCACTTATCTTCAGGGTGGCATAAAAAACTCTATGTCTGGTAACCT **************************************** ******************* HS_haplotype1 CTGAAATTGCTTTGGGGGATTATGAAGAAACTGAACAACATTTTTGTTCAAACATATGTT HS_assemblymutate CTGAAATTGCTTTGGGGGATTATGAAGAAACTGAACAACATTTTTGTTCAAACATATGTT HS_haplotype2 CTGAAATTGCTTTGGGGGATTATGAAGAAACTGAACAACATTTTTGTTCAAACATATGTT ************************************************************ HS_haplotype1 TGAACACCTATGCCCCTAGATCAAGTAGCTTTCCTTATTTATATCTGGGTTTTGATCTCT HS_assemblymutate TGAACACCTATGCCCCTAGATCTAGTAGCTTTCCTTATTTATATCTGGGTTTTGATCTCT HS_haplotype2 TGAACACCTATGCCCCTAGATCTAGTAGCTTTCCTTATTTATATCTGGGTTCTGATCTCT ********************** **************************** ******** HS_haplotype1 ATTCAAGGACTGGGCTTACTAGATAACCTGGAGTTCTATTCTACTGTGCCTGTTCTGATA HS_assemblymutate ATTCAAGGACTGGGCTTACTAGATAACCTGGAGTTCTATTCTACTGTGCCTGTTCTGATA HS_haplotype2 ATTCAATGACTGGGCTTACTGGATAACCTGGAGTTCTATTCTACTGTGCCTGTTCTGATA ****** ************* *************************************** HS_haplotype1 TTGTCCTTGGTAGCTTAGTGGTTTTTCCGCCATGGCAACCCCAATTTCTACTTGGCTCAT HS_assemblymutate TTGTCCTTGGTAGCTTACTGGTTTTTCCACCATGGCAACCCCAATTTCTACTTGGCTCAT HS_haplotype2 TTGTCCTTGGTAGCTTACTGGTTTTTCCACCATGGCAACCCCAATTTCTACTTGGCTCAT ***************** ********** ******************************* HS_haplotype1 CCTCCCGCCGCGTGGCCCCTCCACTGCAACTACATCCCCGACCAGATCGATTGTGCTACT HS_assemblymutate CCTCCCGCCGCGTGGCCCCTCCACTGCAACTACATCCCCGACCAGATCGATAGTGCTACT HS_haplotype2 CCTCCCGCCGCGTGGCCCCTCCACTGCAACTACATCCCCGACCAGATCGATAGTGCTACT *************************************************** ******** HS_haplotype1 AATTCTCTATCCGATGTATTACATTGTGGAGAGAGTATGTACATACCTAAGAGTGGTTCT HS_assemblymutate AATTCTCTATCCGATGTATTACATTGTGGAGAGAGTATGTACATACCTAAGAGTGGTTCT HS_haplotype2 AATTCTCTATCCAATGTAATACATTGTGGAGAGAGTATGTACATACCTAAGAGTGGTTCT ************ ***** ***************************************** HS_haplotype1 CCACCGTGTTGTTTGTGACAATCGTAAAATTGCAGTGATCTGTTGGTTAGTACCCTTTAC HS_assemblymutate CCACCGTGTTGTTTGTGACAATCGTAAAATTTCCGTGATCTGTTGGTTAGTACCCTTTAC HS_haplotype2 CCACCGTGTTGTTTGTGACAATCGTTAAATTTCCGTGATCTGTTGGTTAGTACCCTTTAC ************************* ***** * ************************** HS_haplotype1 CGTGCCCCTCTTACAGTCTGGGAACCCAGTTAGCCAGCTGTTTTTTAGAGACTTTAATGA HS_assemblymutate CGTGCCCCTCTTACAGTCTGGGAACCCAGTTAGCCAGCTGTTTTTTAGAGACTTTAATTA HS_haplotype2 CGTGCCCCTCTTACAGTCTGGGAACCCAGTTAGCCAGCTGTTTTTTAGAGACTTTAATTA ********************************************************** * HS_haplotype1 GGAGCTTCCAACTCAGGATCCGGAGCAGCTACTCTAGTTATATATATTTTGAGTCCTCTC HS_assemblymutate GGAGCTTCCAACTCAGGATCCGGAGCAGCTACTCTAGTTATATATATTTTGAGTCCTCTC HS_haplotype2 GGAGCTTCCAACTCAGGATCCGGAGCAGCTACTCTAGTTATATATATTTTGAGTCCTCTC ************************************************************ HS_haplotype1 CTTCCTACAGATCCCCCGAATTTTTTGTGATATTGCTCTGCTTTGCAGTATGGTCAGGTG HS_assemblymutate CTTCCTACAGATCCCCCGAATTTTTTGTGATATTGCTCTGCTTTGCAGTATGGTCAGGTG HS_haplotype2 CTTCCTACAGATCCCCCGAATTTTTTGTGATATTGCTCTGCTTTGCAGTATGGTCAGGTG ************************************************************ HS_haplotype1 ACAGAAACATGGGAGGTAGAGTAGTATATTTAATTGAACTGATTGCGCGATTTACAGCTG HS_assemblymutate ACAAAAACATGGGAGGTAGAGTAGTATATTTAATTGTACTGATTGCGCGATTTACAGCTG HS_haplotype2 ACAAAAACATGGGAGGTAGAGTAGTATATTTAATTGTACTGATTGCGCGATTTACAGCTG *** ******************************** *********************** HS_haplotype1 GTAGAGCCCTTAGATACTTAAGGAAAGAGGCAGGAATGTTTCCTTCTGTACGGAAAGATG HS_assemblymutate GTAGAGCCCTTAGATACTTAAGGAAAGAGGCAGGAATGTTTCCTTCTGTACGGAAAGATG HS_haplotype2 GTAGAGCCCTTAGATACTTAAGGAAAGAGGCAGGAATGTTTCCTTCTGTACGGAAAGATG ************************************************************ HS_haplotype1 TCCTTTGGAATATCTCAGTTTAGTCTAATCCCCTTTTTCTTCCGACTACATGTGTATTTT HS_assemblymutate TCATTTGGAATATTTCAGTTTAGTCTAATCCCCTTTTTCTTCCGACTACATGTGTATTTT HS_haplotype2 TCATTTGGAATATTTCAGTTTAGTCTAATCCCCTTTTTCTTCCGACTACATGTGTATTTT ** ********** ********************************************** HS_haplotype1 TGTAGATGCTTGGCCTACAGCCTCTTTCTCGGCACTCCGCTTTGGGAGTGGGGCAGAAGG HS_assemblymutate TGCAGATGCTTGGCATACAGTCTCTTTCTCGGCACTCCGCTTTGGGAGTGGGGCTGAAGG HS_haplotype2 TGCAGATGCTTGGCATACAGTCTCTTTCTCGGCACTCCGCTTTGGGAGTGGGGCTGAAGG ** *********** ***** ********************************* ***** HS_haplotype1 ACGACTTGAAGT-AAACTTAAAATTGTAATCTTATCTTCAGAGCAATCAATAGAAGTGAA HS_assemblymutate ACGACTTGAAGTAAAACTTAAAATTGTAATCTTATCTTCAGAGCAATCAATAGAAGTGAA HS_haplotype2 ACGACTTGAAGT-AAACTTAAAATTGTAATCTTATCTTCAGAGCAATCAATAGAAGTGAA ************ *********************************************** HS_haplotype1 GAGATTTTGACATTTCTTAAAATAATTTTAGGCTGGGCAGAAGCCGAGCTGAGCCCCAAT HS_assemblymutate GAGATTTTGACATTTCTTAAAATAATTTTAGGCTGGGCAGAAGCCGAGCTGAGCCCCAAT HS_haplotype2 GAGATTTTGACATTTCTTAAAATAATTTTAGGCTGGGCAGAAGCCGAGCTGAGCCCCAAT ************************************************************ HS_haplotype1 CTTAAAAACTGGGTCAATAAAAGACTTTTCTAATGCCATAGCAATATCAACAAAAGACCT HS_assemblymutate CTTAAAAACTGGGTCAATAAAAGACTTTTCTAATGCCATAGCAATATCAACAAAAGACCT HS_haplotype2 CTTAAAAACTGGGTCAATAAAAGACTTTTCTAATGCCATAGCAATATCAACAAAAGACCT ************************************************************ HS_haplotype1 TCCTTTTGACCCAAATATATCTTGGCTGGAGTCTCATTAATCATGTGCGTGAGCCTTGTT HS_assemblymutate TCCTTTTGACCCAAATATATCTTGGCTGGAGTCTCATTAATCATGTGCGTGAGCCTTGTT HS_haplotype2 TCCTTTTGACCCAAATATATCTTGGCTGGAGTCTCATTAATGATGTGCATGAGCCTTGTT ***************************************** ****** *********** HS_haplotype1 GAATCCTTACTAAAATATTGAAAACAAAATCCGAGTGCATCATTTGTGTCCTGCTGATGG HS_assemblymutate GAATCCTTACTAAAATATTGAAAACAAAATCCGAGTGCATCATTTGTGTCCTGCTGATGG HS_haplotype2 GAATCCTTACTAAAATATTGAAAACAAAATCCGAGTGCATCATTTGTGTCCTGCTGATGG ************************************************************ HS_haplotype1 GCTGTGTATATGGGGGCAAGACATTCTCTACTTTTCTGTAATATCAGTAAGAGGGGCTCA HS_assemblymutate GCTGTGTATATGGGGGCAAGACATTCTCTACTTTTCTGTAATATCAGTAAGAGGGGCTCA HS_haplotype2 GCTGGGTATATGGGGGCAAGACATTCTCTACTTTTCTGTAATATCAGTAAGAGGGGCTCA **** ******************************************************* HS_haplotype1 GGCTGACAGCACTTTGACTGAGCCTTTAAAAATGCAGACTTCTTAAGAGAATTTGCACTT HS_assemblymutate GGCTGACAGCACTTTGACTGAGCCTTTAAAAATGCAGACTTCTTAAGAGAATTTGCACTT HS_haplotype2 GGCTGACAGCACTTTGACTGAGCCTTTAAAAATGCAGACTTCTTAAGAGAATTTGCACTT ************************************************************ HS_haplotype1 TAAAGGCTGTAAAAACCATCTTTGTAGAGTGTATAGCTTCCTCATTGCTGCACCCACCAC HS_assemblymutate TAAAGGCTGTAAAAACCATCTTTGTAGAGTGTATAGCTTCCTCATTGCTGCACCCACCAC HS_haplotype2 TACAGGCTGTAAAAACCATCTTTGTAGAGTGTATAGCTTCCTCATTGCTGCACCCACCAC ** ********************************************************* HS_haplotype1 TTGAACATGCAACATCACCCAAGGTTGTTTCGTAA--TAAAAGATTTTTCTATTTTGCAG HS_assemblymutate TTGAACATGCAACATCACCCAAGGTTGTTTCGTAACCTAAAAGATTTTTCTATTTTGCAG HS_haplotype2 TTGAACATGCAACATCACCCAAGGTTGTTTCGTAA--TAAAAGATTTTTCTATTTTGCAG *********************************** *********************** HS_haplotype1 AGGAAGTGGATTTAAATAATCCAGAAGAGAGGCTGCACTCGTGACCTCCCAGTTATTGCA HS_assemblymutate AGGAAGTGGATTTAAATAATCCAGAAGAGAGGCTGCACTCCTGACCTCCCACTTATTGCA HS_haplotype2 AGGAAGTGGGTTTAAATAATCCAGAAGAGAGGCTGCACTCCTGACCTCCCACTTATTGCA ********* ****************************** ********** ******** HS_haplotype1 TTGTAGTGCTGGCCAGTGGAGGGACGAGTATATAATTTCTCCCAGCCCGTCGGTGGTGTG HS_assemblymutate TTGTAGGGCTGGCCAGTGGAGGGACGAGTATATAATTTCTCCCAGCCCGTCGGTGGTGTG HS_haplotype2 TTGTAGGGCTGGCCAGTGGAGGGAAGAGTATATAATTTCTCCCAGCCCCTCGGTGGGGTG ****** ***************** *********************** ******* *** HS_haplotype1 GTGGTTTTTAATCTTTGCATGGCTCAACTCAATTGCTCCAGCTGAGTTCAAAGAAGAAGG HS_assemblymutate GTGGTTTTTAATCTTTGCATGGCTCAACTCAATTGCTCCAGCTGAGTTCAAAGAAGAAGG HS_haplotype2 GTGGTTTTTAATCTTTGCATGGCTCAACTCAATTGCTCCAGCTGAGTTCAAAGAAGAAGG ************************************************************ HS_haplotype1 AACCCCCTCAGGTGGTTAGTGAGATAGTGGAGCATGAAAGTGTCAACTCTCCAATCTCAT HS_assemblymutate AACCCCCTCAGGTGGTTAGTGAGATAGTGGAGCATGAAAGTGTCAACTCTCCAATCTCAT HS_haplotype2 AACCCCCTCAGGTGGTTAGTGAGATAGTGGAGCATGAAAGTGTCAACTCTCCAATCTCAT ************************************************************ HS_haplotype1 CTATTCATCAGGTAAATAACGCCCACTGAGCTATAGGGTGGATACTGCACAAGGTTCCAT HS_assemblymutate CTATTCATCAGGTAAATAACGCCCACTGAGCTATAGGGTGGATACTGCACAAGGTTCCAT HS_haplotype2 CTATTCATCACGTAAATAACGCCCACTGAGCTATAGGGTGGATACTGCACAAGGTTCCAT ********** ************************************************* HS_haplotype1 TTGGGGAAGTGAGAATCACACCACCAGGGTGTGCCATTAAAATATCACTGCTTATTGAAG HS_assemblymutate TTGGGGAAGTGAGAATCACACCACCAGGGTGTGCCATTAAAATATCACTGCTTATTGAAG HS_haplotype2 TTGGGGAAGTGAGAATCACACCACCAGGGTGTGCCATTAAAATATCACTGCTTATTGAAG ************************************************************ HS_haplotype1 TAAATTTTAAAAATGTCAGCCTGGAACTACAGTGGCATTAAGCCATGTCAGGATTAATAG HS_assemblymutate TAAATTTTAAAAATGTCAGCCTGGAACTACAGTGGCATTAAGCCATGTCAGGATTAATAG HS_haplotype2 TAAATTTTAAAAATGTCAGCCTGGAACTACAGTGGCATTAAGCCATGTCAGGATTAATAG ************************************************************ HS_haplotype1 CGTCCACAGTGTTACAGAGAAATACCACTGTGCAGTTCCACCATCTAACTAACTCCCCAC HS_assemblymutate CGTCCACAGTGTTACAGAGAAATACCACTGTGCAGTTCCACCATCTAACTAACTCCCCAC HS_haplotype2 CGTCCACAGTGTTACAGAGAAATACCACTGTGCAGTTCCACCATCTAACTAACTCCCCAC ************************************************************ HS_haplotype1 CTGTAATCCCTCCAAGTTTGTCACCTCTCCTGTACTTCAGGATCTGAGTTCATTTATGGG HS_assemblymutate CTGTAATCCCTCCAAGTTTGTCACCTCTCCTGTACTTCAGGATCTGAGTTCATTTATGGG HS_haplotype2 CTGTAATCCCTCCAAGTTTGTCACCTCTCCTGTACTTCAGGATCTGAGTTCATTTATGGG ************************************************************ HS_haplotype1 AGTCTTTAATCTATTGTATACAAATCCCTCAGCATTTCAGAAGTAAGTAAACCCTGTATT HS_assemblymutate AGTCTTTAATCTATTGTATACAAATCCCTCAGCATTTCAGAAGTAAGTAAACCCTGTATT HS_haplotype2 AGTCTTTAATCTATTGCATACAAATCCCTCAGCATTTCAGAAGTAAGTAAACCCTGTATT **************** ******************************************* HS_haplotype1 TCAATAATCCTTGTTCTAGGATATATCTCGTATTGTTTGTGAGAAGTTGAGAAATTATCA HS_assemblymutate TCAATAATCCTTGTTCTAGGATATATCTCGTATTGTTTGTGAGAATTTGAGAAATTATCA HS_haplotype2 TCAATAATCCTTGTTCTAGGATATATCTCGTATTGTTTGTGAGAATTTGAGAAATTATCA ********************************************* ************** HS_haplotype1 TAACCTAATTTATGAGCAACATGTCATATGTTAACATTGAGAAGGAATCCCAAGTGAAAA HS_assemblymutate TAACCTAATTTATGAGCAACATGTCATATGTTAACATTGAGAAGGAATCCCAAGTGAAAA HS_haplotype2 TAACCTAATTTATGGGCAACATGTCATATGTTAACATTGAGAAGGAATCCCAAGTGAAAA ************** ********************************************* HS_haplotype1 TCTGCAGAAAGTCACTTCTCCTCTGAGCCCTATCAGCCAAAAAGAATTAGAAGATCTCGG HS_assemblymutate TCTGCAGAAAGTCACTTCTCCTCTGAGCCCTATCAGCCAAAAAGAATTAGAAGATCTCGG HS_haplotype2 TCTGCAGAAAATCACTTCTCCTCTGAGCCCTATCAGCCAAAAAGAATTAGAAGATATCGG ********** ******************************************** **** HS_haplotype1 GAGGGGCCTTGAGTCTCTGGTCAAGACCTCTACTATAATATTTTTAAGACTCAGCCATGC HS_assemblymutate GAGGGGCCTTGAGTCTCTGGTCAAGACCTCTACTATAATATTTTTAAGACTCAGCCATGC HS_haplotype2 CAGGGGCCTTGAGTCTCTGGTCAAGACCTCTACTATAATATTTTTAAGACTAAGCCATGC ************************************************** ******** HS_haplotype1 ATCCTCCCTGTTTCAGGTCAGGCATGTACTGGTACCACGCCTGGATGAGTCTATTGTGGA HS_assemblymutate ATCCTCCCTGTTTCAGGTCAGGCATGTACTGGTACCACGCCTGGATGAGTCTATTGTGGA HS_haplotype2 ATCCTCCCTGTTTCAGGTCAGGCATGTACTGGTACCACGCCTGGATGAGTCTATTGTGGA ************************************************************ HS_haplotype1 GGAGCCGCAGAAGGGCTTATATATTATGTTGAGAGTGATCATCTGAATAAGATCTATCTC HS_assemblymutate GGAGCCGCAGAAGGGCTTATATATTATGTTGAGAGTGATCATCTGAATAAGATATATCTC HS_haplotype2 GGAGCCGCAGAAGGGCTTATATATTATGTTGAGAGTGATCATCTGAATAAGATATATCTC ***************************************************** ****** HS_haplotype1 ACAGGAGGAGTTCATAC---TCTGGGACGCAATGATTGGAGAACCCAGGTGATGAAAAGA HS_assemblymutate ACAGGAGGAGTTCATACGGATCTGGGACGCAATGATTGGAGAACCCAGGTGATGAAAAGA HS_haplotype2 ACAGGAGGAGTTCATAC---TCTGGGACGCAATGATTGGAGAACCCAGGTGATCAAAAGA ***************** ********************************* ****** HS_haplotype1 CTTCCTTAGAAGGAACCCCTGTCTTCAGGCTCTAAAAGCAGGTATAGAGGCTCAAGGAGA HS_assemblymutate CTTCCTTAGAAGGAACCCCTGTCTTCAGGCTCTAAAAGCAGGTATAGAGGCTCAAGGAGA HS_haplotype2 CTTCCTTAGAAGGAACCCCTGTCTTCAGGCTCTAAAAGCAGGTATAGAGGCTCAAGGAGA ************************************************************ HS_haplotype1 TGAAGGTCAAGGACAGTGGCACCCCAGCCTCCCCATCTCATCTCGAGCCGCTCCTGGGTA HS_assemblymutate TGAAGGTCAAGGACAGTGGCAACCCAGCCTCCCCATCTCATCTCGAGCCGCTCCTGGGTA HS_haplotype2 TGAAGGTCAAGGACAGTGGCAACCCAGCCTCCCCATCTCATCTCGAGCCGCTCCTGGGTA ********************* ************************************** HS_haplotype1 CATATGATCATTTACAGGGTGTCTAGTTCAGAGAAACTCATTCTTCCGGATCAAAAATGA HS_assemblymutate CATATGATCATTTACAGGGTGTCTAGTTCAGAGAAACTCATTCTTCCGGATCAAAAATGA HS_haplotype2 CATATGATCATTTACAGGGTGTCTAGTTCAGAGAAACTCATTCTTCCGGATCAAAAATGA ************************************************************ HS_haplotype1 TGACTATATCTCAAGGAAGTCTCAGCCCTTAGCGATTAGCCAGGTTACTGCTCCAAGTGC HS_assemblymutate TGACTATATCTCAAGGAAGTCTCAGCCCTTAGCGATTAGCCAGGTTACTGCTCCAAGTGC HS_haplotype2 TGACTATATCTCAAGGAAGTCTCAGCCCTTAGCGATTAGCCAGGTTACTGCTCCAAGTGC ************************************************************ HS_haplotype1 AGAATCGGAGACCAGAGGGAGTCCCTGGCGCTGGTGCTTCCACTGCTCAAATCTCTTCAG HS_assemblymutate AGAATCGGAGACCAGAGGGAGTCCCTGGCGCTGGTGCTTCCACTGCTCAAATCTCTTCAG HS_haplotype2 AGAATCGGAGACCAGAGGGAGTCCCTGGCGCTGTTGCTTCCACTGCTCAAATCTCTTCAG ********************************* ************************** HS_haplotype1 CTCACAGAGGAAAAAATCCCAGGTTCAAGCTCTACACGAGCAAACTCAAGGAAGTCCCAA HS_assemblymutate CTCACAGAGGAAAAAATCCCAGGTTCAAGCTCTACACGAGCAAACTCAAGGAAGTCCCAA HS_haplotype2 CTCACAGAGGAAAAAATCCCAGGTTCAAGCTCTACACAAGCAACCTCAAGGAAGTCCCAA ************************************* ***** **************** HS_haplotype1 GAAGAGATATGTATAATCTGCCCCCATCCCAAAGTCAAGGATCGTTGCTGTGTACTTTTA HS_assemblymutate GAAGAGATATGTATAATCTGCCCCCATCCCAAAGTCAAGGATCGTTGCTGTGTACTTTTA HS_haplotype2 GAAGAGATATGTATAATCTGCCCCCCTCCCAAAGTCAAGGATCGTTGCTGTGTACTTTTA ************************* ********************************** HS_haplotype1 GAAATAATAAAAAAGAATTAATAGCGATTTTTCTCTCTGA--------------GCACCT HS_assemblymutate GAAATAATAAAAAAGAATTGATAGCGATTTTTCTCTCTTACAGGGCACCTGTAGGCACCT HS_haplotype2 GAACTAATAAAAACGAATTGATAGCGATTTTTCTCTCTTA--------------GCACCT *** ********* ***** ****************** * ****** HS_haplotype1 GTATTATACAGAAAGTTAATTCCCCACCTGGTTGTGTCAACAAAGCAAACAACTGGGCTT HS_assemblymutate GTATTATACAGAAAGTTAATTCCCCACCTGGTTGTGTCAACAAAGCAAACAACTGGGCTT HS_haplotype2 GTATTATACAGAAAGTTAATTCCCCACCTCGTTGTGTCAACAAAGCAAACAACTGGGCTT ***************************** ****************************** HS_haplotype1 CCAATACCTACGGAAAACTCTGCCACCTAAGCCAAACTTTACTACAAAGTTGAGCCAGAT HS_assemblymutate CCAATACCTACGGAAAACTCTGCCACCTAAGCCAAACTTTACTACAAACTTGAGCCAGAT HS_haplotype2 CCAATACCTACGGAAAACTCTGCCACCTAAGCCAAACTTTACTACAAACTTGAGCCAGAT ************************************************ *********** HS_haplotype1 GCGGGTTTCTTTTCCCTCCAATACGGTGGATGAGTGCCTCCTTGAAAGAGCCAACCCAAC HS_assemblymutate TCGGGTTTCTTTTCCCTCCAAAATGGTGGATGAGTGCCTCCTTGAAAGAGCCAACCCAAC HS_haplotype2 TCGGGTTTCTTTTCCTTCCAAAATGGTGGATGAGTGCCTCCTTGGAAGAGCCAACCCAAC ************** ***** * ******************** *************** HS_haplotype1 AGCAATTCCCTGCCTGTGCTTTTTCTGGCATGTAGGGACCGTATCTCAAATGCTAATTAA HS_assemblymutate AGCAATTCCCTGCCTGTGCTTTTTCTGGCATGTAGGGACCGTATCTCAAATGCTAATTAA HS_haplotype2 AGCAATTCCCTGCCTGTGCTTTTTCTGGCATGGAGGGACCGTATCTCAACTGCTAATTAA ******************************** **************** ********** HS_haplotype1 CTATCATTTTCAGTTACTTAGCCTATAATTTAAGTAGAAAAAGGTACAGCTCCTGTGTAG HS_assemblymutate CTATCATTTTCAGTTACTTAGCCTATAATTTAAGTAGAAAAAGGTACAGCTCATGTGTAG HS_haplotype2 CTATCATTTTCAGTTACTTAGCCTGTAATTTAAGTAGAAAAAGGTACAGCTCATGTGTAG ************************ *************************** ******* HS_haplotype1 GGGTCACCCAGCGGCGAGATTGGTTGTCATGCGGAGTAGAAAGGATCCTGCGGTCTACTG HS_assemblymutate GGGTCACCCAGCGGCGAGATTGGTTGTCATGCGGAGTAGAAAGGATCCTGCGGTCTACTG HS_haplotype2 GGGTCACCCAGCGGCGAGATTGGTTGTCAGGCGGAGAAGAAAGGATCCTGCGGTCTACTG ***************************** ****** *********************** HS_haplotype1 GAGTCCATACTAGCAGGATTGTCTGGCCGAGTCCAATGTTTTTGGAAACATAATCCTGAA HS_assemblymutate GAGTCCATACTAGCAGGATTGTCTGGCCGAGTCCAATGTTTTTGGAAACATAATCCTGAA HS_haplotype2 GAGTCCATAGTAGCAGGATTGTCTGGCCGAGTCCAATGTTTTTGGAAACATAATCCTGAA ********* ************************************************** HS_haplotype1 AAACCCCAAGTAGAGACCACTGGGATAGTGAGCTCCTGCGCCCATTTTAGTGGTCCCTCA HS_assemblymutate AAACCCCAAGTAGAGACCACTGGGATAGTGAGCTCCTGCGCCCATTTTAGTGGTCCCTCA HS_haplotype2 AAACCCCAAGTAGAGACCACTGGGTTAGTGAGCTCCTGCGCCCATTTAAGTGGTCCCTCA ************************ ********************** ************ HS_haplotype1 TAAAATTACAAGGT------ATCGCCCAGTCTTGAATCAAACGCTAGAAGTTTGGGTGAA HS_assemblymutate TAAAATTACAAGGTACTTAAATCGCCCAGTCTTGAATCAAACGCTAGAAGTTTGGGTGAA HS_haplotype2 TAAAATTACAAGGT------ATCGCCCAGTCTTGAATCAAACGCTAGAAGTTTGGGTGAA ************** **************************************** HS_haplotype1 AGCCCTACAGTGTAGGGCAGATGCATAGGGTCAAACCCGTCTTGAGATCATGTAATCAAA HS_assemblymutate AGCCCTACAGTGTAGGGCAGATGCATAGGGTCAAACCCGTCTTGAGATCATGTAATCAAA HS_haplotype2 AGCCCTACAGTGTAGGGCAGATTCATAGGGTCAAACCCGTCTTGAGATCATGTAATCAAA ********************** ************************************* HS_haplotype1 AGCCATATAGACCAAAAGAGCGAGATGAAGGTGGCAGGTGCTTCTGTCAGCACCACGAAA HS_assemblymutate AGCCATATAGACCAAAAGAGCGAGATGAAGGTGGCAGGTGCTTCTGTCAGCACCACGAAA HS_haplotype2 AGCCATATAGACCAGAAGAGCGAGATGAAGGTGGCAGGTGCTTCTGGCAGCACCACGAAA ************** ******************************* ************* HS_haplotype1 TGTGTATTAGCTCATTGCTTGTCTGTTCTTCCAATATATCATTTTTGTTTGGGGAAATTA HS_assemblymutate TGTGTATTAGCTCATTGCTTGTCTGTTCTTCCAATATATCATTTTTGTTTGGGGAAATTA HS_haplotype2 TGTGTATTAGCTCATTGCTTGTCTGTTCTTCCAATATATCATTTTTGTTTGGGGAAATTA ************************************************************ HS_haplotype1 ACACACATTGCTGGGGGGAGAGGTGCCTCGGCCCTTATTTTTCCTTTCTAATTCGAGACA HS_assemblymutate ACACACATTGCTGGGGGGAGAGGTGCCTCGGCCCTTATTTTTCCTTTCTAATTCGAGACA HS_haplotype2 ACACACATTGCTGGGGGGAGAGGTGCCTCGGCCCTTATTTTTCCTTTCTAATTCGAGACA ************************************************************ HS_haplotype1 AAACACACCTCATTGATTTCCAGGTGGGGTGTTGCCCAGCCCAGTTCAGAAAAAAACAAC HS_assemblymutate AAACACACCTCATTGATTTCCAGGTGGGGTGTTGCCCAGCCCAGTTCAGAAAAAAACAAC HS_haplotype2 AAACACACCTCATTGATTTCCAGGTGGGGTGTTGCCCAGCCCAGTGCAGAAAAAAACAAC ********************************************* ************** HS_haplotype1 TACCCTACTTTGAGACTAGGTCCTGGGGCTCTTTATTAGACAATATAAATCAATATTTGG HS_assemblymutate TACCCTACTTTGTGACTAGGTCCTGGGGCTCTTTATTAGACAATATAAATCAATATTTTG HS_haplotype2 TACCCTACTTTGTGACTAGGTCCTGGGGCTCTTTATTAGACAATATAAATCAATATTTTG ************ ********************************************* * HS_haplotype1 GTTTCAGGCTAAAATAGAATGGTGTTAGCAAGGCGCGTGAAATTCCTTTTGAGTCAAAAA HS_assemblymutate GTTTCAGGCTAAAATAGAATGGTGTTATCAAGGCGCTAGAAATTCCTTTTGAGTCAAAAA HS_haplotype2 GTTTCAGGCTAAAATAGAATGGTGTTATCAAGGCGCTAGAAATTCCTTTTGAGTCAAAAA *************************** ******** ********************** HS_haplotype1 ATTGTCCAATGCCTCAGGGGCCACCAATAATTCCAACAT--------------------- HS_assemblymutate ATTGTCCAATGCCTCAGGGGCCACCAATAATTCCAACATCAGTCTTTTTGGACCATGTTA HS_haplotype2 ATTGTCCAATGCCTCAGGGGCCACCAATAATTCCAACAT--------------------- *************************************** HS_haplotype1 ---CTGGGTGGGAGGTGTGGAAAGTGCAACCCTGGGTCGGGAGCTCACACTTTTAAACGG HS_assemblymutate TAACTGGGTGGGAGGTGTGGAAAGTGCAACCCTGGGTCGGGAGCTCACACTTTTAAACGG HS_haplotype2 ---CTGGGTGGGAGGTGTGGAAAGTGCAACCCTGGGTCGGGAGCTCACACTTTTAAACGG ********************************************************* HS_haplotype1 AGTTATAACATGGTCCAAAAATACTTATTTCGAAAAAAACATTGAATACAAAAAGAACTG HS_assemblymutate AGTTATAACATGGTCGAAAAATACTTATTTCGGAAAAAACATTGAATACAAAAAGAACTG HS_haplotype2 AGTTATAACATGGTCGAAAAATACTTATTTCGGAAAAAACATTGAATACAAAAAGAACTG *************** **************** *************************** HS_haplotype1 GCCAGAAAACATTAAGATGCCACGTGAGAAGGAACCTGGGGTTTGTTCTATCTTCTAGTT HS_assemblymutate GCCAGAAAACATTAAGATGCCACGTGAGAAGGAACCTGGGGTTTGTTCTATCTTCTAGTT HS_haplotype2 GCCAGAAAACATTAAGATGCCACGTGAGAAGGAACCTGGGGTTTGTTCTATCTTCTAGTT ************************************************************ HS_haplotype1 TTCTAGTGAGAAAAACTGGAGTCCCAGCACCCCTCCAGGTTTTCAGCCATCTCGAAACTA HS_assemblymutate TTCTAGTGAGAAAAACTGGAGTCCCAGCACCCCTCCAGGTTTTCAGCCATCTCGAAACTA HS_haplotype2 TTCTAGTGAGAAAAACTGGAGTCCCAGCACCCCTCCAGGTTTTCAGCCATCTCGAAACTA ************************************************************ HS_haplotype1 TGTTGGGTGGCAACTCCAAATCAGGAATTCCTTGCCCCAAGTCTTAAACATATTTCCAAC HS_assemblymutate TGTTGGGTGGCAACTCCAAATCAGGAATTCCTTGCCCCAAGTCTTAAACATATTTCCAAC HS_haplotype2 TGTTGGGTGGCAACTCCAAATCAGGAATTCCTTGCCCCAAGTCTTAAACATATTTCCAAC ************************************************************ HS_haplotype1 AGACTTTTATGAATGGCTCATACTAGATGCTAGCTTCAATCAGACTGGGACAGTCCAAGT HS_assemblymutate AGACTTTTATGAATGGCTCATACTAGATGCTAGCTTCAATCAGACTGGGACAGTCCAAGT HS_haplotype2 AGACTTTTATGAATGGCTCATACTAGATGCTAGCTTCAATCAGACTGGGACAGTCCAAGT ************************************************************ HS_haplotype1 CTGTTAAGCAGCCAGACGGGGGGAAAAAATGGTGTGTATGGCCTCAGTGGCCCAGGTAAA HS_assemblymutate CTGTTAAGCAGCCAGACGGGGGGAAAAAATGGTGTGTATGGCCTCAGTGGCCCAGGTAAA HS_haplotype2 CTGTTAAGCAGCCAGACGGGGGGAAAAAATGGTGTGTATGGCCTCAGTGGCCCAGGTAAA ************************************************************ HS_haplotype1 GAAACTCCAGCCTGTTTATAGAAATGTGAGTTCTGGCAGGCAACACAACTTAGAGTGCAA HS_assemblymutate GAAACTCCAGCCTGTTTATAGAAATGTGAGTTCTGGCAGGCAACACAACTTAGAGTGCAA HS_haplotype2 GAAACTCCAGCCTGTTTATAGAAATGTGAGTTCTGGCAGGCACCACAACTTAGAGTGCAA ****************************************** ***************** HS_haplotype1 AAGAGATGATCTCTCAGGCTGAGACACCCTGGCAGGACCAACACACTGGCACAAAAGGGA HS_assemblymutate AAGAGATGATCTCTCAGGCTGAGACACCCTGGCAGGACCAACACACTGGCACAAAAGGGA HS_haplotype2 AAGAGATGATCTCTCAGGCTGAGACACCCTGGCAGGACCAACACACTGGCACAAAAGGGA ************************************************************ HS_haplotype1 AGGAAATTCAGCCTCCCAACTGTTGCAGTAGACGTTCCTTGCTATTTTTGTATAGGCACA HS_assemblymutate AGGAAATTCAGCCTCCCAACTGTTGCGGTAGACGTTCCTTGATATTTTTGTATAGGCACA HS_haplotype2 AGGAAATTCAGCCTCCCAACTGTTGCGGTAGACGTTCCTTGATATTTTTGTATAGGCACA ************************** ************** ****************** HS_haplotype1 GTGCTGAAGTACACTTTTTAAGTGATATAATCATTGATCCTGACCCCTAATATTCTTTCA HS_assemblymutate GTGCTGAAGTACACTTTTTAAGTGATATAATCATTGATCCTGACCTCTAATATTCTTTCA HS_haplotype2 GTGCTGAAGTACACTTTTTAAGTGATATAATCATTGATCCTGACCTCTCATATTCTTTCA ********************************************* ** *********** HS_haplotype1 ACAGAGAGACCCCTTGGTGGTTTCACTGGGTTTAGTATCTATACACAGTCTTCTCTTCCT HS_assemblymutate ACAGAGAGACCCCTTGGTGGTTTCACTAGGTTTAGTATCTATACACAGTCTTCTCTTCCT HS_haplotype2 ACAGAGAGACCCCTTGGTGGTTTCACTAGGTTTAGTATCTATAAACAGTCTTCTCTTCCT *************************** *************** **************** HS_haplotype1 TACCAGTGTGGGAAGGAAAGAGGGAAAAAGAACACAAGATACGCACCGCAGCTATGCAAT HS_assemblymutate TACCAGTATGGGAAGGAAAGAGGGACAAAGAACACAAGATACGCACCGCAGCTATGCAAT HS_haplotype2 TACCAGTATGGGAAGGAAAGAGGGACAAAGAACACAAGATACGCACCGCAGCTATGCAAT ******* ***************** ********************************** HS_haplotype1 TATATAATGTATGTATATGAAAATATTTTCTTCACATGCGTGAGAGTCCCAGGCTGCTTT HS_assemblymutate TATATAATGTATGTATATGAAAATACTTTCTTCACATGCGTGAGAGTCCCAGGCTGCTTT HS_haplotype2 TATATAATGTATGTATATGAAAATACTTTCTTCACATGCGTGAGAGTCCCAGGCTGCTTT ************************* ********************************** HS_haplotype1 ATGTAATCTGGCGGTGTACTAGCCAGGCATGCCTGTCCCATTCCTCTTCATAAAAAATAA HS_assemblymutate ATGTAATCTGGCGGTGTACTAGCCAGGCATGCCTGTCCCAGTCCTCTTCATAAAAAATAA HS_haplotype2 ATGTAATCTGGCGGTGTACTAGCCAGGCATGCCTGTCCCAGTCCTCTTCATAAAAAATAA **************************************** ******************* HS_haplotype1 AGAGGAGGCAGGGCCAATTCTGGGGGGGGTCTCTGGAGAAACATTCCAGCAGAAGCGCGG HS_assemblymutate AGAGGAGGCAGGGCCAATTCTGGGCGGAGTCTCTGGAGAAACATTCCAGCAGAAGCGCGG HS_haplotype2 AGAGGAGGCAGGGCCAATTCTGGGCGGAGTCTCTGGAGAAACATTCCAGCAGAAGCGCGG ************************ ** ******************************** HS_haplotype1 GAGGTGTGTTCAGTGACTTATCCTTCTAGCCTCCAATCTTAAAGAAGACTTCGATGTAGA HS_assemblymutate GAGGTGTGTTCAGTGACTTATCCTTCTAGCCTCCAATCTTAAAGAAGACTTCGATGTAGA HS_haplotype2 GAGGTGTGTTCAGTGACTTATCCTTCTAGCCTCCAATCTTAAAGAAGACTTCGATGTAGA ************************************************************ HS_haplotype1 AAAGTCTTTTCTTGTATATGTGTGCCCAGGCATCAGTCATTCCAAAGAAAATGGCAGACA HS_assemblymutate AAAGTCTTTTCTTGTATATGTGTGCCCAGGCATCAGTCATTCCAAAGAAAATGGCAGACA HS_haplotype2 AAAGTCTTTTCTTGTATATGTGTGCCCAGGCATCAGTCATTCCAAAGAAAATGGCAGACA ************************************************************ HS_haplotype1 GAGCCCAGAGCTGAAAAATACCTGTAAGTTGATCAAGGGGAGCACTTGCCATCTAGCCCT HS_assemblymutate GAGCCCAGAGCTGAAAAATACCTGTAAGTTGATCAAGGGGAGCACTTGCCATCTAGCCCT HS_haplotype2 GAGCCCAGAGCTGAAAAATACCTGTAAGTTGACCAAGGGGAGCACTTGCCATCTAGCCCT ******************************** *************************** HS_haplotype1 GCGAAGAGCTCACAGAGGTGTGTTTTTTTCTAGCTAAAATGCAGTATCCAAGATATTTTT HS_assemblymutate GCGAAGAGATCACAGAGGTGTGTTTTTTTCTAGCTAAAATGCAGTATCCAAGATATTTTT HS_haplotype2 GCGAAGAGATCACAGAGGTGTGTTTTTTTCTAGCTAAAATGCAGTATCCAAGATATTTTT ******** *************************************************** HS_haplotype1 GAATGGAGGTGTTACAATTGTAACTCATTGTTTCAGTGGAGAGGCGCCACTACTGGCTCC HS_assemblymutate GAATGGAGGTGTTACAATTGTAACTCATTGTTTCAGTGGAGAGGCGCCACTAATGGCTCC HS_haplotype2 GAATGGAGGTGTTACAATTGTAACTCATTGTTTCAGTGGAGAGGCGCCACTAATGGCTCC **************************************************** ******* HS_haplotype1 GTCCCTCCCGTCCTCACGACTTAAATGGTGTAATATGAGGCGTGCCTGGCAGCCTGGGGT HS_assemblymutate GTCCCTCCCGTCCTCACGACTTAAATGGTGTAATATGAGGCGTGCCTGGCAGCCTGGGGT HS_haplotype2 GTCCCTCCCGTCCTCACGACTTAAATGGTGTAATATGAGGCGTGCCTGGCAGCCTGGGGT ************************************************************ HS_haplotype1 GGTGGTGAGTTTGCATAAAAGCTATTAACTTGGCCACACCCAGGGGGCACCTGTTGTTGC HS_assemblymutate GGTGGTGAGTTTGCATAAAAGCTATTAACTTGGCCACACCCAGGGGGCACCTGTTGTTGC HS_haplotype2 GGTGGTGAGTTTGCATAAAAGCTATTAACTTGGCCACACCCAGGGGGCACCTGTTGTTGC ************************************************************ HS_haplotype1 ACATTCTCAGCCCTTTGCTTTCCTGCGATTCCACAGGGTTCCAATGTTTCTCAGACGCCA HS_assemblymutate ACATTCTCAGCCCTTTGCTTTCCTGCGATTCCACAGGGTTCCAATGTTTCTCAGACGCCA HS_haplotype2 ACATTCTCAGCCCTTTGCTTTCCTGCGATTCCACAGGATTCCAATGTTTCTCAGATGCCA ************************************* ***************** **** HS_haplotype1 ACTTGTCACTCTCAAAAGAGGTTCCTGCTGGATGAGACCCATATATAAGTACAATATAAA HS_assemblymutate ACTTGTCACTCTCAAAAGAGGTTCCTGCTGGATGAGACCCATATATAAGTACAATATAAC HS_haplotype2 TCTTGTCACTCTCAAAAGAGGTTCCTGCTGGATGAGACCCATATATAAGTACAATATAAC ********************************************************** HS_haplotype1 CAGTACCTGGCCTGAGGATCCAAGCGCTGCGTGCTCAGGGTGTGGACAGACTCACTCATA HS_assemblymutate CAGTACCTGGCCTGAGGATCCAAGCGCTGCGTGCTCAGGGTGTGGACAGACTCACTCATA HS_haplotype2 CAGTACCTGGCCTGAGGATCCAAGCGCTGCGTGCTCAGGGTGTGGACAGACTCACTCATA ************************************************************ HS_haplotype1 TGATACTGAGGTAGCTAGGTCGATTCCAGGCTACAGAGGCCTTTTATAAGCCACTTAAAT HS_assemblymutate TGATACTGAGGTAGCTAGGTCAATTCCAGGCTACAGAGGCCTTTTATAAGCCACTTAAAT HS_haplotype2 TGATACTGAGGTAGCTAGGTCAATTCCAGGCTACAGAGGCCTTTTATAAGCCACTTAAAT ********************* ************************************** HS_haplotype1 GCACTGTTTGAGCTAGACCTCCCACCCCTGCTACTTGAATCAGACGGTGCGCCTGTCTCA HS_assemblymutate GCACTGTTTGAGCTAGACCTCCCACCCCTGCTACTTCAATCAGACGGTGCGCCTGTCTCA HS_haplotype2 GCACTGTTTGAGCTAGACCTCCCACCCCTGCTACTTCAATCAGACGGTGCGCCTGTCTCA ************************************ *********************** HS_haplotype1 GGGGCTATTAGTCATGGCCGGGCCAGGAGTGCAAGAGCTGCAGCTCTCTCCAGAATTTTA HS_assemblymutate GGGGCTATAAGTCATGGCCGGGCCAGGAGTGCAAGAGCTGCAGCTCTCTCCAGAATTTTA HS_haplotype2 GGGGCTATAAGTCATGGCCGGGCCAGGAGTGCAAGAGCTGCAGCTCTCTCCAGAATTTTA ******** *************************************************** HS_haplotype1 TTGTTTTCAATGAAACAAAACCCAGATTAACCTTGAAGTTGTGTTCGCCCCAGGGACTAT HS_assemblymutate TTGTTTTCAATGAAACAAAACCCAGATTAACCTTGAAGTTGTGTTCGCCCCAGGGACTAT HS_haplotype2 TTGTTTTCAATGAAACAAAACCCCGATTAACCTTGAAGTTGTGTTCGCCCCAGGGACTAT *********************** ************************************ HS_haplotype1 TTTCAAATCCTCCACCCGTTGGAGCTCCACCGTGCCGTCTCGTTGAGCCAGACTGTTCAG HS_assemblymutate TTTCAAATCCTCCCCCAGTTGGAGCTCCACCGTGCCGTCTCGTTGAGCCAGACTGTTCAG HS_haplotype2 TTTCCAATCCTCCCCCAGTTGGAGCTCCACCGTGCCGTCTCGTTGAGCCAGACTGTTCAG **** ******** ** ******************************************* HS_haplotype1 AGTTCTAGCTTCTACCTGCAGAGTACACATAACACCAGCTTCTGTTGTCACAAAAACGAT HS_assemblymutate AGTTCTAGCTTCTACCTGCAGAGTACACATAACACCAGCTTCTGTTGTCACCAAAACGAT HS_haplotype2 AGTTCTAGCTTCTACCTGCAGAGTACACATAACACCAGCTTCTGTTGTCACCAAAACGAT *************************************************** ******** HS_haplotype1 GCCTAAATAAGTGCTTAGACTGGTGGACGAGAGGTATTTCAACCGAGAGTCTCACTAAAA HS_assemblymutate GCCGAAATAAGTGCTTAGACTGGTGGACTAGAGGTATTTCAACCTAGAGTCTCACTAAAA HS_haplotype2 GCCGAAATAAGTGCTTAGACTGGTGGACTAGAGGTATTTCAACCTAGAGTCTCACTAAAA *** ************************ *************** *************** HS_haplotype1 AAACTATATAGAGACCCCGCCAGTCCAGACCATCTCTACTTAAAACAAGCAGTGAGTAAA HS_assemblymutate AAACTATATAGAGACCCCGTCAGTCCAGACCATCTCTACTTAAAACAAGCAGTGAGTAAA HS_haplotype2 AAACTATATAGAGACCCCGTCAGTCCAGACCATCTCTACTTAAAACAAGCAGTGAGTAAA ******************* **************************************** HS_haplotype1 AATAAATGTTTTTTCAGATAAGCACTCTCACAGGAGAGCCGGAAATGCACGACATCCTTA HS_assemblymutate AATAAATGTTTTTTCAGATAAGCACTCTCACAGGAGAGCCGGAAATGCACGACATCCTTA HS_haplotype2 AATAAATGTTTTTTCACATAAGCACTCACACAGGAGAGCCAGAAATGCACGACATCCTTA **************** ********** ************ ******************* HS_haplotype1 CGGTGAGCCGAGCTGAGTGCTGTGTAAGGTCATTAGTCAAAGGAAGAAAGCCTGAAGATA HS_assemblymutate CGGTGAGCCGAGCTGAGTGCTGTGTAAGGTCATTAGTCAAAGGAAGAAAGCCTGAAGATA HS_haplotype2 CGGTGAGCCGAGCTGAGTGCTGTGTAAGGTCATTAGTCAAAGGAAGAAAGCCTGAACATA ******************************************************** *** HS_haplotype1 TTAAGTTTGGAAGGCTCAGACTCCTGGGAGGGGAATGTCCAGAGTAGGAATGCACGGAGC HS_assemblymutate TTAAGTTTGGAAGGCTCAGACTCCTGGGAGGGGAATGTCCAGAGTAGGAATGCACGGAGC HS_haplotype2 TTAAGTTTGGAAGGCTCAGACTCCTGTGAGGGGAATGTCCAGAGTAGGAATGCACGGAGC ************************** ********************************* HS_haplotype1 GGCCGGCTTCAGTCTCCACAGAGATGTGGCTTTTTAAAGCCAGAAGACCCAGGCTCACAG HS_assemblymutate GGCCGGCTTCAGTCTCCACAGAGATGTGGCTTTTTAAGGCCAGAAGACCCAGGCTCACAG HS_haplotype2 GGCCGGCTTCAGTCTCCACAGAGATGTGGCTTTTTAAGGCCAGAAGACCCAGGCTCACAG ************************************* ********************** HS_haplotype1 AGATGAGGCTGAGCCTGACAGGCGAAGCCCCAGCCACTGGGTGGGTGCTGTCCCTCAGAG HS_assemblymutate AGATGAGGCTGAGCCTGCCAGGCGAAGCCCCAGCCACTGGGTGGGTGCTGTCCCTCAGAT HS_haplotype2 AGATGAGGCTGAGCCTGCCAGGCGAAGCCCCAGCCACTGGGTGGGTGCTGTCCCTCAGAT ***************** ***************************************** HS_haplotype1 TGTTACCCTTCCCTTGATTATAGTAAATTAAAAAAGTGCTCCTCCCGGCTCTAAATAGGT HS_assemblymutate TGTTACCCTTCCCTTGATTATAGTAAATTAAAAAAGTGCTCCTCCCGGCTCTAAATAGGT HS_haplotype2 TGTTACCCTTCCCTTGATTATAGTAAATTAAAAAAGTGCTCCTCCCGGCTCTAGATAGGT ***************************************************** ****** HS_haplotype1 ACTTCTGGATGGGAGGCTCACCTGCCACTGTTTTTTCTGAGGCTTCCGTGAACCGGGTTC HS_assemblymutate ACTTCTGGATGGGAGGCTCACCTGCCACTGTTTTTTCTGAGGCTTCCGTGAACCGGGTTC HS_haplotype2 ACTTCTGGATGGGAGGCTCACCTGCCACTGTTTTTTCTGAGGCTTCCGTGAACCGGGTTC ************************************************************ HS_haplotype1 ACCATCTATAGAGCTTCATCAGGATATTTTTATGGGATGTAAACAGAATGAGGAATAGGT HS_assemblymutate ACCATCTATAGAGCTTCATCAGGATATTTTTATGGGATGTAAACAGAATGAGGAATAGGT HS_haplotype2 ACCATCTATAGAGCTTCATCAGGATATTTTTATGGGATGTAAACAGAATGAGGAATAGGT ************************************************************ HS_haplotype1 AGAATTGAACTAAATGGTACGCATTAATGATGTGGTCCCCCACCACATAACAATGGGCTT HS_assemblymutate AGAATTGAACTAAATGGTACGCATTAATGATGTGGTCCCCCACCACATAACAATGGGCTT HS_haplotype2 GGAATTGAACTAAATGGTACACATTAATGATGTGGTCCCCCACCACATAACAATGGGCTT ******************* *************************************** HS_haplotype1 CTGTCTCAGGCTCTACAGGAGTGCTGTAATATAATTTTCTTCCAGCTCCCGGGGTGTCAT HS_assemblymutate CTGTCTCAGGCTCTACAGGAGTGCTGTAATATAATTTTCTTCCAGCTCCCGGGGTGTCAT HS_haplotype2 CTGTCTCAGGCTCTACAGGAGTGCTGTAATATAATTTTCTTCCAGCTCCCGGGGTGTCAT ************************************************************ HS_haplotype1 GTAATCCTCATGCGGATCCCACTCCAGGAGGGGCTCCAGCTCACTTTTTTAGTGGGACTC HS_assemblymutate GTAATCCTCATGCGGATCCCACTCCAGGAGGGGTTCCAGCACACTTTTTTAGTGGCACTC HS_haplotype2 GTAATCCTCATGCGGATCCCACTCCAGGAGGGGTTCCAGCACACTTTTTTAGTGGCACTC ********************************* ****** ************** **** HS_haplotype1 CACAAGCGAGAATAAATGCTGGAAAGGGCGTGGCTGAATCTAAGAGCCTTACAAAACAAC HS_assemblymutate CACAAGAGAGAATAAATGCTGGAAAGGGCGTGACTGAATCTAAGAGCCTTACATAACAAC HS_haplotype2 CACAAGAGAGAATAAATGCTGGAAAGGGCGTGACTGAATCTAAGAGCCTTACATAACAAC ****** ************************* ******************** ****** HS_haplotype1 CTGACAGGGGCTTCCCTTCCTGGCACAACTATAATTTTAATGAAACACAAACATATGTTT HS_assemblymutate CTGACAGGGGCTTCCCTTCCTGGCACAACTATAATTTTAATGAAACACAAACATATGTTT HS_haplotype2 CTGACAGGGGCTTCCCTTCCTGGCACAAATATAATTTTAATGAAACACAAACATATGTTT **************************** ******************************* HS_haplotype1 ACATCAAAAGATATCCTGCCAATACAAAATAGTAGCCTGGATCTCAACTAAATCCAGGGC HS_assemblymutate ACATCAAAAGATATCCTGCCAATACAAAATAGTAGCCTGGCTCTCAACTAAATCCAGGGC HS_haplotype2 ACATCAAAAGATATCCTGCCAATACAAAATAGTAGCCTGGCTCTCAACTAAATCCAGGGC **************************************** ******************* HS_haplotype1 CATGCTCTACTAATTGAGGCAACGCATGAATTCATAGTCAAGTCAGATAATGGTTTGAAT HS_assemblymutate CATGCTCTACTAATTGAGGCAACGCATGAATTCATAGTCAAGTCAGATAATGGTTTGAAT HS_haplotype2 CATGCTCTACTAATTGAGGCAACGCATGAATTCATAGTCAAGTCAGATAATGGTTTGAAT ************************************************************ HS_haplotype1 AAAGAATATGCATTAGAGCGACTCTTAAGATTACGCTTTGAAAGGGCCCAGGTTTAAACT HS_assemblymutate AAGGAATATGCATTAGAGCGACTCTTAAGATTACGCTTTGAAAGGGCCCAGGTTTAAACT HS_haplotype2 AAGGAATATGCATTAGAGCGACTCTTAAGATTACGCTTTGAAAGGGCCCAGGTTTAAACT ** ********************************************************* HS_haplotype1 GTAATTACATTCAAAAAATAAAAGGGTTATTTTATTCATATCCTCAGCTAATGATCACAT HS_assemblymutate GTAATTACATTCAAAAAATAAAAGGTTTATTTTATTCATATCCTCAGCTAATGATCACAT HS_haplotype2 GTAATTACATTCAAAAAATAAAAGGTTTATTTTATTCATATCCTCAGCTAATGATCACAT ************************* ********************************** HS_haplotype1 GTCCACCTTTGGTTCCACCCCACTTGTAAGAGCGGCCTCCCACCTTAGGGATGGTGACAC HS_assemblymutate GTCCACCTTTGGTTCTACCCCACTTGTAAGAGCGGCCTCCCACCGTAGGGATGGTGACAC HS_haplotype2 GTCCACCTTTGGTTCTACCCCACTTGTAAGAGCGGCCTCCCACCGTAGGGATGGTGACAC *************** **************************** *************** HS_haplotype1 ATGAGGGGAAATCATATATTTTAAAACCCGGGCTTCCCTCCTCCCCCACGCCGGCTTTTT HS_assemblymutate ATGAGGGGAAATCATATATTTTAAAACCCGGGCTTCCCTCCTCCCCCAGGCCGGCTTTTT HS_haplotype2 ATGAGGGGAAATCATATATTTTAAAACCCGGGCTTCCCTCCTCCCCCAGGCCGGCTTTTT ************************************************ *********** HS_haplotype1 GTGGAACCTTGCCTGGCAGCTCTAAATGCACCTGCACATGCCTCCTCCTAGATCATTTTT HS_assemblymutate GTGGAACCTTGCCTGGCAGCTCTAAATGCACCTGCACATGCCTCCTCCTAGATCATTTTT HS_haplotype2 GTGGAACCTTGCCTGGCAGCTCTAAATGCACCTGCACATGCCTCCTCCTAGATCATTTTT ************************************************************ HS_haplotype1 TTTAAATAAATAAATATAATAGAAAAACAATAAGATATTATGTTATGAACTGGGGAAACT HS_assemblymutate TTTAGAAAAAGAAATATAATAGAAAAACAATAAGATATTATTTTATGAGCTGGGGAAACT HS_haplotype2 TTTAGAAAAAGAAATATAATAGAAAAACAATAAGATATTATTTTATGAGCTGGGGAAACT **** * *** ****************************** ****** *********** HS_haplotype1 CCTGTAAATAAGCCAGGAGTCTATGGCAAGCACTTTGGTCCCACCCCAGTCTTATTAAAT HS_assemblymutate CCTGTAAATAAGCCAGGAGTCTATGGCAACCACTTTGGTCCCACCGCAGTCTTATTAAAT HS_haplotype2 CCTGTAAATAAGCCAGGAGTCTATGGCAACCACTTTGGTCCCACCGCAGTCTTATTAAAT ***************************** *************** ************** HS_haplotype1 TAGTGGACAGAAGATTCGGCAACAACACTGTAATATCACGCAAATAAAACATTATTGAGC HS_assemblymutate TAGTGGACAGAAGATTCGGCAACAACACTGTAATATCACGCAAATAAAACATTATTGAGC HS_haplotype2 TAGTGGACAGAAGATTCGGCAACAACACTGTAATATCACGCAAATAAAACATTATTGAGC ************************************************************ HS_haplotype1 GAGACAGAAACTGTGATCTAGACAGTGATGAGGGCGGCTCAGGTGAAGAACTTTCCGCCC HS_assemblymutate GAGACAGAAACTGTGATCTAGACAGTGATGAGGGCGGCTCAGGTGAAGAACTTTCCGCCC HS_haplotype2 GAGACAGAAAATGTGATCTAGACAGTGATGAGGGCGGCTCAGGTGAAGAACTTTCCGCCC ********** ************************************************* HS_haplotype1 CAGCACGAGACTCTGGTGGAATCGCTCTGGAGAAACTTTCGAAGAATGCTGCACACCAGA HS_assemblymutate CAGCACGAGACTCTGGTGGAATCGCTCTGGAGAAACTTTCGAAGAATGCTGCACACCAGA HS_haplotype2 CAGCACGAGACTCTGGTGGAATCGCTCTGGAGAAACTTTCGAAGAATGCTGCACACCAGA ************************************************************ HS_haplotype1 CAGGAAGCTGCCTCAGACACACAAACAACAAACCTTCGCAACAATATTAACCCAGATTCT HS_assemblymutate CAGGAAGCTGCCTCAGACACACAAACCACAAACCTTCGCAACAATATTAACCCAGATTCT HS_haplotype2 CAGGAAGCTGCCTCAGACACACAAACCACAAACCTTCGCAACAATATTAACCCAGATTCT ************************** ********************************* HS_haplotype1 TTTTATTATATTGAGACTTGAGACTGCAAAGCAAGTGCCCTCTTCATTAGGGAATTTCCA HS_assemblymutate TTTTATTATATTGAGACTTGAGACTGCAAAGCAAGTGCCCTCTTCATTAGGGAATTTCCA HS_haplotype2 TTTTATTATATTGAGACTTGAGACTGCAAAGCAAGTGCCCTCTTCATTAGGGAATTTCCA ************************************************************ HS_haplotype1 TCTGTTTTCATAAATAAATGGCTACTATGAGACCACCTCACGCGATTGCAGGAGTTCTTT HS_assemblymutate TCTGTTTTCATAAATAAATGGCTACTATGAGACCACCTCACGCGATTGCAGGAGTTCTTT HS_haplotype2 CCTGTTTTCATAAATAAATGGCTACTATGAGACCACCTCAGGCGATTGCAGGAGATCCTT *************************************** ************* ** ** HS_haplotype1 TGTTCAGGAGACCAGTACAGAGATTTCTCAGTTTATCTACCCTCTATACCACAAAGGAAG HS_assemblymutate TGTTCAGGAGACCAGTACAGAGATTTCTCAGTTTATCTACCCTCTATACCACAAAGGAAG HS_haplotype2 TGTTCAGGAGACCAGTACAGAGATTTCTCAGTTTATCTACCCTCTATACCAAAAAGGAAG *************************************************** ******** HS_haplotype1 CCTCAGAGTAGGGGGTTAAATGCACAGGCACCAAGAATTCTTGACAGAGAGGGTGGATAT HS_assemblymutate CCTCAGAGTAGGGGGTTAAATGCACAGGCACCAAGAATTCTTGACAGAGAGGGTGGATAT HS_haplotype2 CGTCAGAGTAGGGGGTTAAATGCACAGGCACCAAGAATTCTTGACAGAGAGGGTGGATAT * ********************************************************** HS_haplotype1 CCAAGATTCATTGAGAAGCTGGTATGGTCGGTTCATACCTTTCCCTGGGGCTCGCAATGT HS_assemblymutate CCAAGATTCATTGAGAAGCTGGTATGGTCGGTTCATACCTTTCCCTGGGGCTCGCAATGT HS_haplotype2 CCAAGATTCATTGGGAAGCTGGTATGGTCGGTTCATACCTTTCCCTGGGGCTCCCAATGT ************* *************************************** ****** HS_haplotype1 CAGTCACTGGGAAATCCCAAATGTCATTTGAGATAAGTGGCTGGTAGATGTATGTATATA HS_assemblymutate CAGTCACTGGGAAATCCCAAATGTCATTTGAGATAAGTGGCTGGTAGATG-ATGTATATA HS_haplotype2 CAGTCACTGGGAAATCCCAAATGTCATTTGAGATAAGTGGCTGGTAGATAGATGTATATA ************************************************* ********* HS_haplotype1 CACCATCACGGTTGGCAGAAAATTTCACTAGTTCAGAAAACAGTGGGGCTGTGGAATACT HS_assemblymutate CACCATCACGGTTGGCAGAAAATTTCACTAGTTCAGAAAACAGTGGGGCTGTGGAATACT HS_haplotype2 CACCATCACGGTTGGCAGAAAATTTCACTAGTTCAGAAAACAGTGGGGCTGTGGAATACT ************************************************************ HS_haplotype1 CTCAAAGAATCAGCAGTGAGGGAGCATACTTCACTTACTGAACCAAAGAAAAATTCCGGG HS_assemblymutate CTCAAAGAATCAGCAGTGAGGGAGCATACTTCACTTACTGAACCAAAGAAAAATTCCGGG HS_haplotype2 CTCAAAGAATCAGCAGTGAGGGAGCATACTTCACTTACTGAACCAAAGAAAAATTCCGGG ************************************************************ HS_haplotype1 CCGGGTTTGAGTAGAGGAGTTCAAGCCCCATTTATTAATGCCTGGGCTCTGTCTGGAGGC HS_assemblymutate CCGGGTTTGAGTACAGGAGTTCAAGCCCCATTTATTAATGCCTGGGCTCTGTCTGGCGGC HS_haplotype2 CCGGGTTTGAGTACAGGAGTTCAAGCCCCATTTATTAATGCCTGGGCTCTGTCTGGCGGC ************* ****************************************** *** HS_haplotype1 GCAAAACAAAATCACTCCATTCAGACGATCATTGAAATACAGGCGGCACACAGCTTTATA HS_assemblymutate GCAAAACAAAATCACTCCATTCAGACGATCATTGAAATACAGGCGGCACACAGCTTTATA HS_haplotype2 GCAAAACAAAATCACTCCATTCTGACGATCATTGAAATACAGGCGGCACACAGCTTTCTA ********************** ********************************** ** HS_haplotype1 AAAACTCTACTTTTAGCCGAAGCCCCGCTGTTGTTTTGCTACAAAGAATTTATTCAAGAC HS_assemblymutate AAAACTCTACTTTTAGCCGAAGCCCCGCTGTTGTTTTGCTACAAAGAATTTATTCAAGAC HS_haplotype2 AAAACTCTACTTTTAGCCGAGGCCCCGCAGTTGTTTTGCTAAAAAGAATTTATTCAAGGC ******************** ******* ************ **************** * HS_haplotype1 TGTGTTGGATTACAAAGAGGCTGCCACACAAGTGGCTTTTCATTATACTTGACAATGAGG HS_assemblymutate TGTGTTGGATTACAAAGAGGCTGCCACACAAGTGGCTTTTCATTATACTTGACAATGAGG HS_haplotype2 TGTGTTGGATTACAAAGAGGCTGCCACACAAGTGACTTTTCATTATACTTGACAATGAGG ********************************** ************************* HS_haplotype1 GACTATTTAGGTCAGGGACAGGTGGATGGAAGTGCAGTTTTCTTTCTTTTCTGGTATCGA HS_assemblymutate GACTATTTAGGTCAGGGACAGGTGGATGGAAGTGCAGTTTTCTTTCTTTTCTGGTATTGA HS_haplotype2 GACTATTTAGGTCAGGGACAGGTGGATGGAAGTGCAGTTTTCTTTCTTTTCTGGTATTGA ********************************************************* ** HS_haplotype1 TCACTACTACAGTAAGCAGCGTAAGTAACTCCCAGGCCTCCCTGAAGAAAGTTCAATTTT HS_assemblymutate TCACTACTACAGTAAGCAGCGTAAGTAACTCCCAGGCCTCCCTGAAGAAAGATCACTTTT HS_haplotype2 TCACTACTACAGTAAGCAGCGTAAGTAACTCCCAGGCCTCCCTGAAGAAAGATCACTTTT *************************************************** *** **** HS_haplotype1 AGAGAGTCTCGGTCAAGCAGATGGGCCTCATGTGTCAGGCCAACACGTAGCTGGTAAAGA HS_assemblymutate AGAGAGTCTCGGTCAAGCAGATGGGCCTCATGTGTCAGGCCAACACGTAGCTGGTAAAGA HS_haplotype2 AGAGAGTCTCGGTCAAGCAGATGGGCCTCATGTGTCAGGCCAACACGTAGCTGGTAAAGA ************************************************************ HS_haplotype1 TTAAGGCTCAGGTGGCATTCAGCTGAAATTATTAATCCACAATTTTCAGGGCCCCCATAC HS_assemblymutate TTAAGGCTCAGGTGGCATTCAGCTGAAATTATTAATCCACAATTTTCAGGGCCCCCATAC HS_haplotype2 TTAAGGCTCAGGTGGCATTCAGCTGAAATTATTAATCCACAATTTTCAGGGCCCCCATAC ************************************************************ HS_haplotype1 TTTGCAGCCATTGAGAATCGTCACATGTAGGAGACCAGATCACATCGACAATGAATTATT HS_assemblymutate TTTGCAGCCATTGAGAATCGTCACCTGTAGGAGACCAGATCACATCCACAATGAATTATT HS_haplotype2 TTTGCAGCCATTGAGAATCGTCACCTGTAGGAGACCAGATCACATCCACAATGAATTATT ************************ ********************* ************* HS_haplotype1 TCATAAAACTCCAGCTAGTAGTCATCTGGCTATAATGAATTTGGTTTTCTTTCTGGAGAG HS_assemblymutate TCATAAAACTCCAGCTTGTAGTCATCTGGCTATAATGAATTTGGTTTTCTTTCTGGAGAG HS_haplotype2 TCATAAAACTCCAGCTTGTAGTCATCTGGCTATAATGAATTTGGTTTTCTTTCTGGAGAG **************** ******************************************* HS_haplotype1 CTTGGGTTTTCTCACTGAATCTGATTTGGATCGCTGGGTTCGTGCTGATGAGAGAGAATC HS_assemblymutate CTTGGGTTTTCTCACTGAATCTGATTTGGATCGCTGGGTTCGTGCTGATGAGAGAGAATC HS_haplotype2 CTTCGGTTTTCTCACTGAATCTGATTTGGATCGCTGGGTTCGTGCTGATGACAGAGAATC *** *********************************************** ******** HS_haplotype1 AACATGTCTGCCACATTCATCCTCAGCTGCTTAGGGAATTTATTTGGTAGATTTCTGGGA HS_assemblymutate AACATGTCTGCCACATTCATCCTCAGCTGCTTAGGGAATTTATTTGGTAGATTTCTGGGA HS_haplotype2 AACATGTCTGCCACATTCATCCTCAGCTGCTTAGGGAATTTATTTGGTAGATTTCTGGGA ************************************************************ HS_haplotype1 TGCCTCCCCACGAAATCACCTTGCCAACTTCCCACCTTAAGCACAGGACATTGACTCGGC HS_assemblymutate TGCCTCCCCACGAAATCACCTTGCCAACTTCCCACCTTAAGCACAGGACATTGACTCGGC HS_haplotype2 TGCCTCCCCACGAAACCACCTTGCCAACTTCCCACCTTAAGCACAGGACATTGACTCGGC *************** ******************************************** HS_haplotype1 ACAGAAAAAGTGGCACAATGTTTGAACCCATATTTTCTTTCTTCATGTTGTAGTGATTCT HS_assemblymutate ACAGAAAAAGTGGCACAATGTTTGAACCCATATCTTCTTTCTTCATGTTGTAGTGATTCT HS_haplotype2 ACAGAAAAAGTGGCACAATGTTTGAACCCATATCTTCTTTCTTCATGTTGTAGTGATTCT ********************************* ************************** HS_haplotype1 AATGTCCACGACTCACTCCAGGCAGGTGCAACAAGTTAAGTAGCTCTGCAGTAAGATTAA HS_assemblymutate AATGTCCACGACTCACTCCAGGCAGGTGCAACAAGTTAAGTAGCTCTGCAGTAAGATTAA HS_haplotype2 AATGTCCACGACTCACTCCAGGCAGGTGCAACAAGTTAAGTAGCTCTGCAGTAAGATTAA ************************************************************ HS_haplotype1 GATAGACTGTAATCCTTGCGCAGCCAAGATTATTTCCATAGAATTGGCTAGAAAAGAGGA HS_assemblymutate GATAGACTGTAATCCTTGCGCAGCCAAGATTATTTCCATAGAATTGGCTAGAAAAGAGGA HS_haplotype2 GATAGACTGTAATCCTTGCGCAGCCAAGATTATTTCCATAGAATTGGTTAGAAAAGAGGA *********************************************** ************ HS_haplotype1 TCTAGATAGTAAGTTGTCAATGATGAACCTGTCAAGTGCTAATCCTGCGTGTGTGTTTTG HS_assemblymutate TCTAGATAGTATGTTGTCAATGATGAACCTGTCAAGTGCTAATCCTGCTTGTGTGTTTTG HS_haplotype2 TCTAGATAGTATGTTGTCAATGATGAACCTGTCAAGTGCTAATCCTGCTTGTGTGTTTTG *********** ************************************ *********** HS_haplotype1 TTATGGAAGATGGATAAGTGATTTGACATTGGGAAAGGAGATCACTTTGTGTCCTTCCTG HS_assemblymutate TTATGGAAGATGGATAAGTGATTTGACATTGGGAAAGGAGATCACTTTGTGTCCTTCCTG HS_haplotype2 TTATGGAAGATGGATAAGTGATTTGACATTGGGAAAGGAGATCACTTTGTGTCCTTCCTG ************************************************************ HS_haplotype1 AAGCTACTCTGGGGGTTGTTGAATCTGTCTCTGTCTCTACCTGGGCTCAGGAGTCTAGGT HS_assemblymutate AAGCTACTCTGGGGGTTGTTGAATCTGTCTCTGTCTCTACCTGGGCTCAGGAGTCTAGGT HS_haplotype2 AAGCTACTCTGGGGGTTGTTGAATCTGTCTCTGTCTCTACCTGGGCTCAGGAGTCTAAGT ********************************************************* ** HS_haplotype1 TAGAGAATGAACAGGTGCCTGGATTACTGTCCAAAGCTTCTTAGATGGAACTGGGATCTC HS_assemblymutate TAGAGAATGAACAGGTGCCTGGATTACTGTCCAAAGCTTCTGAGATGGAAATGGGAGCTC HS_haplotype2 TACAGAATGAACAGGTGCCTGGATTACTGTCCAAAGCTTCTGAGATGGAAATGGGAGCTC ** ************************************** ******** ***** *** HS_haplotype1 AGCAGAAAAATGTGCTAAGATTCATCCAGTTATTGAAAATTATTTCTCTGTCTCGAAGGG HS_assemblymutate AGCAGAAAAATGTGCTAAGATTCATCCAGTTATTGAAAATTATTTCTCTGTCTCGAAGGG HS_haplotype2 AGCAGAAAAATGTGCTAAGATTCATCCAGTTATTGAAAATTATTTCTCTGTCTCGAAGGG ************************************************************ HS_haplotype1 ATTGCTGGGGACTGCAGTTTTTTGGCTGGCCACTTTCCCTATCAATCAGGCCGCGTGGGC HS_assemblymutate ATTGCTGGGAACTGCAGTTTTTTGGCTGGCCACTTTCCCGATCAATCAGGCCGCGTGGGC HS_haplotype2 ATTGCTGGGAACTGCAGTTTTTTGGCTGGCCACTTTCCCGATCAATCAGGCCGCGTGGGC ********* ***************************** ******************** HS_haplotype1 TTGTGTCTCAATCTTAACATATGTAACGAAACGAAGACATTTACGACCAATGTGTTGGTA HS_assemblymutate TTGTGTCTCAATCTTAACATATGTAACGAAACGAAGACATTTACGACCAATGTGTTGGTA HS_haplotype2 TTGTGTCTCAATCTTAACATATGTAACGAAACGAAGACATTTACGACCAATGTGTTGGTA ************************************************************ HS_haplotype1 AAAATTTTATCGTAACTGACTTGGCCATTCCAGCTTATCTCCTCCCTAGGGAGTCAAGAG HS_assemblymutate AAAATTTTATCGTAACTGACTTGGCCATTCCAGCTTATTTCCTCCCTAGGGAGTCAAGAG HS_haplotype2 AAAATTTTATCGTAACTGACTTGGCCATTCCAGCTTATTTCCTCCCTAGGGAGTCAAGAG ************************************** ********************* HS_haplotype1 AAGTTTTGTACAAAGCCACTCCGCAGCTAGATGGCCTTCTTACATTCAATGCTGTCATGC HS_assemblymutate AAGTTTTGTACAAAGCCACTCCGCAGCTAGATGGCCTTCTTACATTCAATGCTGTCATGT HS_haplotype2 AAGTTTTGTACAAAGCCACTCCGCAGCTAGATGGCCTTCTTACATTCAATGCTGTCATGT *********************************************************** HS_haplotype1 AAATTCCTGCTTGGGAGGGAGGCCGAAAGTAATCCAGCTCACGACCTCTCACTGTTCTTC HS_assemblymutate AAATGCCTGCTTGGGAGGGAGGCCGAAAGTAATCCAGCTCACGACCTCTCACTGTTCTTC HS_haplotype2 AAATGCCTGCTTGGGAGGGAGGCCGAAAGTAATCCAGCTCACGACCTCTCACTGTTCTTC **** ******************************************************* HS_haplotype1 TGATTACAGAGTGCTTCCCCGGGGGATTAGGGATGTAATGAGCCGTAGTAAAATGATTCT HS_assemblymutate TGATTACAGAGTGCTTCCCCGGGGGATTAGGGATGTAATGAGCCATAGTAAAATGATTGT HS_haplotype2 TGATTACAGAGTGCTTCCCCGGGGGATTAGGGATGTAATGAGCCATAGTAAAATGATTGT ******************************************** ************* * HS_haplotype1 CTCGAACAGTCTGGCCCACCAATATGTTTGTTAGAACCAATGTAATCTGGGGGCCCTTGG HS_assemblymutate CTCGAACAGTCTGGCCCACCAATATGTTTGTTAGAACCAATGTAATCTGGGGGCCCTTGG HS_haplotype2 CTCGAACAGTCTGGCCCACCAATATGTTTGTTAGAACCAATGTAATCTGGGGGCCCTTGG ************************************************************ HS_haplotype1 TTGATCTCAGGTTGTGATTTTTGAAAGATCGGCGGCCGAGATGTGTGTACCCAGCCACCA HS_assemblymutate TTGATCTCAGGTTGTGATTTTTGAAAGATGGGCGGCCGAGATGTGTGTACCCAGCCACCA HS_haplotype2 TTGATCTCAGGTTGTGATTTTTGAAAGATGGGCGGCCGAGATGTGTGTACCCAGCCACCA ***************************** ****************************** HS_haplotype1 CACTTTTCACTATACAATCACCTATATGAAGGTATCGGAATTTCAATACTTACAGAATGC HS_assemblymutate CACTTTTCACTATACAATCACCTATATGAAGGTATCGGAATTTCAATACTTACAGAATGC HS_haplotype2 CACTTTTCACTATACAATCACCTATATGAAGGTATCGGAATTTCAATACTTACAGAATGC ************************************************************ HS_haplotype1 CAAGTGTTTTCTAAAAAACAAACAATAAGACTTGTTTATCCCACGGGAGTTGTGCCACCC HS_assemblymutate CAAGTGTTTTCTAAAAAACAAACAATAAGACTTGTTTATCCCACGGGAGTTGTGCCACCC HS_haplotype2 CAAGTGTTTTCTAAAAAACAAACAAAAAGACTTGTTTATCCCACGGGAGTTGTGCCACCC ************************* ********************************** HS_haplotype1 AGGAGGCTCACAGGGAGTTCCAACAACATGCTGTGTATTTCAGACAATGCAGTTTGTTAT HS_assemblymutate AGGAGGCTCACAGGGAGTTCCAACAACATGCTGTGTATTTCAGACAATGCAGTTTGTTAT HS_haplotype2 AGGAGGCTCACAGGGAGTTCCAACAACATGCTGTGTATTTCAGACAATGCAGTTAGTTAT ****************************************************** ***** HS_haplotype1 GCAATGAGGAAGGGAGGAAACCACTTAAAAAGTTAGGAGTTGCCCCGTCTGAGCCACTTT HS_assemblymutate GCAATGAGGAAGGGAGGAAACCACTTAAAAAGTTAGGAGTTGCCCCGTCTGAGCCACTTT HS_haplotype2 GCAATGAGGGAGGGAGGAAACCACTTAAAAAGTTAGGAGTTGCCCCGTCTGAGCCACTTT ********* ************************************************** HS_haplotype1 ATTGTTTGAGGATGGAAATTTATTTGCTTGCAGTGGCTTAAAACCAGCCCCGGCCAGCAT HS_assemblymutate ATTGTTTGAGGATGGAAATTTATTTGCTTGCAGTGGCTTAAAACCAGCCCCGGCCAGCAT HS_haplotype2 ATTGTTTTAGGATGGAAATTTATTTGCTTGCAGTGGCTTAAAACCAGCCCCGGCCAGCAT ******* **************************************************** HS_haplotype1 CCCATGTTTGCAAAACCTCTTTAAAGTATAGCTGGGCCAGGCGCCTCCACCGTTGTAAAT HS_assemblymutate CCCATGTTTGCAAAACCTCTTTAAAGTATAGCTGGGCCAGGCGCCTCCACCGTTGTAAAT HS_haplotype2 CCCATGTTTGCAAAACCTCTTTAAAGTATAGCTGGGCCAGGCGCCTCCACCGTTGTAAAT ************************************************************ HS_haplotype1 AAAGTTGAAGAGTAAATAATGGGTGGGCTCATTCAATATAGAGATTCTATCTGGGGAACT HS_assemblymutate AAAGTTGAAGAGTAAATAATGGGTGGGCTCATTCAATATAGAGATTCTATCTGGGGAACT HS_haplotype2 AAAGTTGAAGAGTAAATAATGGGTGGGCTCATTCAATATAGAGATTCTATCTGGGGAACT ************************************************************ HS_haplotype1 TTCCATTTGTGTGTCTCAGGAGGATTAGCAAGGAATGGATGATGTAAGGTTTCTCCCGTT HS_assemblymutate TTCTATTTGTGTGTCTCAGGAGGATTAGCCAGGAAGGGATGATGTAAGGTTTCTCCCTTT HS_haplotype2 TTCTATTTGTGTGTCTCAGGAGGATTAGCCAGGAAGGGATGATGTAAGGTTTCTCCCTTT *** ************************* ***** ********************* ** HS_haplotype1 TCTCTGTCACCGAGGTTTCAACCCAGACACTACCCTATGCTGCACATTCTTCATCGGCTC HS_assemblymutate TCTCTGTCACCGAGGTTTCAACCCAGACACTACCCTAGGCTGCACATTCTTCATCGGCTC HS_haplotype2 TCTCTGTCACCGAGGTTTCAACCCAGACACTACCCTAGGCTGCACATTCTTCATCGGCTC ************************************* ********************** HS_haplotype1 AGACAGCTAATGAGAAGAATAAGTTAAGTGAGAATATCTTTAAAACACAGCGTGCCACAT HS_assemblymutate AGGCAGCTAATGAGAAGAATAAGTTAAGTGAGAATATCTTTAAAACACAGCGTGCCACAT HS_haplotype2 AGGCAGCTAATGAGAAGAATAAGTTAAGTGAGAATATCTTTAAAACACAGCGTGCCACCT ** ******************************************************* * HS_haplotype1 TAAAAAATGCCATTCATAGTGTGGAAGGTCCCGCCGCCTGTGGAAGTTTATTCTGTCTCA HS_assemblymutate TAAAAAATGCCATTCATAGTGTGGAAGGTCCCGCCGCCTGTGGAAGTTTATTCTGTCTCA HS_haplotype2 TAAAAAATGCCATTCATAGTGTGGAAGGTCCCGTCGCCTGTGGAAGTTTATTCTGTCTCA ********************************* ************************** HS_haplotype1 AAACTACCTGTAATCTGATTGGCTGGGCTGCTCACACCAAGTGCAGAAACAGCACCTCAG HS_assemblymutate AAACTACCTGTAATCTGATTGGCTGGGCTGCTCACACCAAGTGCAGAAACAGCACCTCAG HS_haplotype2 AAACTACCTGTAATCTGCTTGGCTGGGCTGCTCACACCAAGTGCAGAAACAGCACCTCAG ***************** ****************************************** HS_haplotype1 CAACTTTAGGGGAGCCAATACTAATATCTGGCTTAAAATAAAGTTACAGCCTGAGAAATA HS_assemblymutate CAACTTTAGGGGAGCCAATACTAATATCTGGCTTAAAATAAAGTTACAGCCTGAGAAATA HS_haplotype2 CAACTTTAGGGGAGTCAATACTAATATCTGGCTTAAAATAAAGTTACAGCCTGAGAAATA ************** ********************************************* HS_haplotype1 TCTTAGAATGCCACCGTGCTGTACTCATCCAGGAATTAGGTACTGGCCAGCCTCAGAAGC HS_assemblymutate TCTTAGAATGCCACCGTGCTGTACTCATCCAGGAATTAGGTACTGGCCAGCCTCAGAAGC HS_haplotype2 TCTTAGACTGCCACCGTGCTGTACTCATCCAGGAATTAGGCACTGACCAGCCTCAGAAGC ******* ******************************** **** ************** HS_haplotype1 TCTGCAGTGCCCTGCCTTTAACCAGGGAGGGAGAAAAATAGAAGGCTCCCCAGGTTGTCT HS_assemblymutate TCTGCAGTGCCCTGCCTTTAACCAGGGAGGGAGAAAAATAGAAGCCTCCCCAGGTTGTCT HS_haplotype2 TCTGCAGTGCCCTGCCTTTAACCAGGGAGGGAGAAAAATAGAAGCCTCCCCAGGTTGTCT ******************************************** *************** HS_haplotype1 CCCCCCACCAGGCTTAAGGAACAGTCGACTGGGGCAACAATTGAATGGGGCGGGAGGTAT HS_assemblymutate CCCCCCACCAGGCTTAAGGAACAGTCGACTGGGGCAACAATTGAATGGGGCCGGAGGTTT HS_haplotype2 CCCCCCACCAGGCTTAAGGAACAGTCGACTGGGGCAACAATTGAATGGGGCCGGAGGTTT *************************************************** ****** * HS_haplotype1 AACACCACTGGGGAGGCGAGGTCCGACCCCTCCTCACTTGAAACCATCCCCTGCTGGGCT HS_assemblymutate AACACCACTGGGGAGGCGAGGTCCGACCCCTCCTCACTTGAAACCATCCCCTGCTGGGCT HS_haplotype2 AACACCACTGGGGAGGCGAGGTCCGACCCCTCCTCACTTGAAACCATCCCCTGCTGGGCT ************************************************************ HS_haplotype1 CATATACATGGTGGAGACCTTTCTTTGAAAACATGAGTTTGATTCTCTCACTGAGATCTG HS_assemblymutate CATATACATGGTGGAGCCCTTTCTTTGAATACATGAGTTTGATTCTCTCACTGAGATCTG HS_haplotype2 CATATACATGGTGGAGCCCTTTCTTTGAATACATGAGTTTGATTCTCTCACTGAGATCTG **************** ************ ****************************** HS_haplotype1 CAAGAGGAGACGGTTCTTTTCAATTAAAGCCCTCTCTTTGCATACCAGGCATGGCAGGCA HS_assemblymutate CAAGAGGAGACGGTTCTTTTCAATTAAAGCCCTCTCTTTGCATACCAGGCATGGCAGGCA HS_haplotype2 CAAGAGGAGACGGTTCTTTTCAATTAAAGCCCTCTCTTTGCATACCAGGCATGGCAGGCA ************************************************************ HS_haplotype1 AGTCCCTCCTAAAATGACTTGAGAGGAGAGGGCAGAGGAGAAATCTATTTATTTTCCTGG HS_assemblymutate AGTCCCTCCTAAAATGACTTGAGAGGAGAGGGCAGAGGAGAAATCTATTTATTTTCCTGG HS_haplotype2 AGTCCCTCCTAAAATGACTTGAGAGGAGAGGGCAGAGGAGAAATCTATTTATTATCCTGG ***************************************************** ****** HS_haplotype1 TGGCTAAGAAGGACAGCACCAACCATCTTAGCAGTGGAGTATTCACATTTATATGGCTAC HS_assemblymutate TGGCTCAGAAGGACAGCACCAACCATCTTAGCAGTGGAGTATTCACATTTATATGGCTAC HS_haplotype2 TGGCTCAGAAAGACAGCACCAACCATCTTAGCAGTGGAGTATTCACATTTATATGGCTAC ***** **** ************************************************* HS_haplotype1 TTTAGTGCAAAAAAGTTACACCGGAGGCTGGACCTAAGGGCAAGTGAGCATCTGAATGCT HS_assemblymutate TTTAGTGCAAAAAAGTTACACCGGAGGCTGGACCTAAGGGCAAGTGAGCATCTGAATGCT HS_haplotype2 TTTAGTGCAAAAAAGTTACACCGGAGGCTGGACCTAAGGGCAAGTGAGCATCTGAATGCT ************************************************************ HS_haplotype1 GTCCGTTATACAGGCACTTAAAGACTAGGAAGGTAGAATAGTGTTGGGCACCATTTGCAT HS_assemblymutate GTCCGTTATACAGGCACTTAAAGACTAGGAAGGTAGAATAGTGTTGGGCACCATTTGCAT HS_haplotype2 GTCCGTTATACAGGCACTTAAAGACTAGGAAGGTAGAATAGTGTTGGGCACCATTTGCAT ************************************************************ HS_haplotype1 TGTCCCTAGGAAGAACATGTTGCATTTTTAACCTTTTAAAAAAACAAGTATTAGCAATTC HS_assemblymutate TGTCCCTAGGAAGAACATGTTGCATTTTTAACCTTTTAAAAAAACAAGTATTAGCAATTC HS_haplotype2 TGTCCCTAGGAAGAACATGTTGCATTTTTAACCTTTTAAAAAAACAAGTATTAGCAATTC ************************************************************ HS_haplotype1 ACATAAAAGTCACCCCATGCTGGGGAGCTCACATATGTGTGCCACAATTACATTTGTTGG HS_assemblymutate ACATAAAAGTCACCCCATGCTGGGGAGCTCACATATGTGTGCCACAATTACATTTGTTGG HS_haplotype2 ACATAAAAGTCACCCCATGCTGGGGAGCTCACATATGTATGCCACAATTACATTTGTTGG ************************************** ********************* HS_haplotype1 ACTGGCCTGTCCTGCTGAGGTGACTGGGAGATCTCCTGACTACTGTCTGACCTCGGGAGG HS_assemblymutate ACTGGCCTGTCCTGCTGAGGTGACTGGGAGATCTCCTGACTACTGTCTGACCTCGGGAGG HS_haplotype2 ACTGGCCTGTCCTGCTGAGGTGACTGGGACATCTCCTGACTACTATCTGACCTCGGGAGG ***************************** ************** *************** HS_haplotype1 TGAGGAAAATACGTTGATGGTTACCTAGCTGGACAAAAACGGCAGTTTCTCATGTGAGAC HS_assemblymutate TGAGGAAAATACGTTGATGGTTACCTAGCTGGACAAAAACGGCAGTTTCTCATGTGAGAC HS_haplotype2 TGAGGAAAATACGTTGATGGTTACCTAGCTGGACGAAAACGGCAGTTTCTCATGTGAGAC ********************************** ************************* HS_haplotype1 TCCGCGAAATTCCAACACATTCAAAAAAAGACCAAGGAAACTCCATCCAGGTGTGCTCAT HS_assemblymutate TCCGCGAAATTCCAACACATTCAAAAAAAGACCAAGGAAACTCCATCCAGGTGTGCTCAT HS_haplotype2 TCCGCGAAATTCCAACACATTCAAAAAAAGACCAAGGAAACTCCATCCAGGTGTGCTCAT ************************************************************ HS_haplotype1 AAAATCATAAGATAGGGCACGAAATGGACATGCTATTCTGCCCAGTGCGAAGAGGATGTA HS_assemblymutate AAAATCATAAGATAGGGCACGAAATGGACATGCTATTCTGCCCAGTGCGAAGAGGATGTA HS_haplotype2 AAAATCAAAAGATAGGGCAAGAAATGGACATGCTATTCTGCCCAGTGCGAAGAGGATGTA ******* *********** **************************************** HS_haplotype1 ATCCTGAGTTCAAAAGGTTAAGGATTGTTTGGAATTGAACTTTTATTTTTGTATCCACAA HS_assemblymutate ATCCTGAGTTCAAAAGGTTAAGGATTGTTTGGAATTGAACTTTTATTTTTGTATCCACAA HS_haplotype2 ATCCTGAGTTCTAAAGGTTAAGGATTGTTTGGAATTGAACTTTTATTTTTGTATCCACAA *********** ************************************************ HS_haplotype1 GAAAGCAGTTGGCTTGAGTAGAAGCCTTGAGCAAGCCTTTGTTTCAGTTACATTTGGCTC HS_assemblymutate GAAAGCAGTTGGCTTGAGTAGAAGCCTTGAGCAAGCCTTTGTTTCAGTTACATTTGGCTC HS_haplotype2 GAAAGCAGTTGGCTTGAGTAGAAGCCCTGAGCAAGCCTTTGTTTCAGTTACATTTGGCTC ************************** ********************************* HS_haplotype1 TCCTATTGGTCCCCACTATATATTCAGAAAGTACTTATCCTGCAAACAGATTCCTAGGTG HS_assemblymutate TCCTATTGGTCCCCACTATATATTCAGAAAGTACTTATCCTGCAAACAGATTCCTAGGTG HS_haplotype2 TCCTATTGGTCCCCACTATATATTCAGAAAATACTTATCCTGCAAACAGATTCCTAGGTG ****************************** ***************************** HS_haplotype1 TGCTGCTACCTGGTCTTTAAAAACAAGAAAATGGATTTTGGGGCTTTGGCACCTTGGGAG HS_assemblymutate TGCTGCTACCTGGTCTCTAAAAACAAGAAAATGGATTTTGGGGCTTTGGCACCTTGGGAG HS_haplotype2 TGCTGCTACCTGGTCTCTAAAAACAAGAAAATGGATTTTGGGGCTTTTGCACCTTGGGAG **************** ****************************** ************ HS_haplotype1 ACCAAGATAGCTCTATGACAATCCAGAGGCTATCTTCGCTAATGACATGACTTCCATTTA HS_assemblymutate ACCAAGATAGCTCTATGACAATCCAGAGGCTATCTTCGCTAATGACATGACTTCCATTTA HS_haplotype2 ACCAAGATAGCTCTATGACAGTCCAGAGGCTATCTTTGGTAATGACATGACTTCCATTTA ******************** *************** * ********************* HS_haplotype1 GTGTTTTCTGTGGTATAAGAAGAGATGAAAACCTGATCACCTGTCTCCCTTGGAAAAATG HS_assemblymutate GTGTTTTCTGTGGTATAAGAAGAGATGAAAACCTGATCACCTGTCTCCCTTGGAAAAATG HS_haplotype2 GTGTTTTCTGTGGTATAAGAAGAGATGAAAACCTGATCACCTGTCTCCCTTGGAAAAATG ************************************************************ HS_haplotype1 GTATGTATCATGAGAGTCAAAATTACAGCTCTTGTCTCAAGTTAGGTCAGGAAGGTGCTC HS_assemblymutate GTATGTATCATGAGAGTCAAAATTACAGCTCTTGTCTCAAGTTAGGTCAGGAAGGTGCTC HS_haplotype2 GTATGTATCATGAGAGTCAAAATTACAGCTCTTGTCTCAAGTTAGGTCAGGAAGGTGCTC ************************************************************ HS_haplotype1 GCAGCGCGCCTGGTGTCAGACCAAAAAGAAGGAAGGGCGAAAGATTAGGAAAATTAAAAG HS_assemblymutate GCAGCGCGCCTGGTGTCAGACCAAAAAGAAGGAAGGGCGAAAGATTAGGAAAATTAAAAG HS_haplotype2 GCAGCGCGCCTGGTGTCAGACCAAAAAGAAGGAAGGGCGAATGATTAGGAAAATTAAAAG ***************************************** ****************** HS_haplotype1 GACATAAATCTTCTGTGAAATATTTTGGAGAAAGGATGCAGCAAGATATGTGGCTGGTTG HS_assemblymutate GACATAAATCTTCTGTGAAATATTTTGGAGAAAGGATGCAGCAAGATATGTGGCTGGTTG HS_haplotype2 GACATAAATCTTCTGTGAAATATTTTGGAGAAAGGATGCAGCAAGATATGTGGCTGGTTG ************************************************************ HS_haplotype1 ACCCTAACTGCGCAGGTGATGACAGAGTTTATTTCGGTAAATGGATCAAAGAACACATTT HS_assemblymutate ACCCTAACTGCGCAGGTGATGACAGAGTTTATTTCGGTAAATGGATCAAGGAACACATTT HS_haplotype2 CCCCTAACTGCGCAGGTGATGACAGAGTTTATTTCGGTAAATGGATCAAGGAACACATTT ************************************************ ********** HS_haplotype1 ATCTCCCATAATATATTAGAAAAGAAAGGACAGCGATCCTTAGCCATATAGGATGGCTCA HS_assemblymutate ATCTCCCAAAATATATTAGAAAAGAAAGGACAGCCATCCTTAGCCATATAGGATGGCTCA HS_haplotype2 ATCTCCCAAAATATATTAGAAAAGAAAGGACAGCCATCCTTAGCCATATAGGATGGCTCA ******** ************************* ************************* HS_haplotype1 TCAGCCCCAGTCTCGACCATGAAGAACACTTTTTTCCTTTGTCCTTGTCTCGCGCCTGGC HS_assemblymutate TCAGCCCCAGTCTCGACCATGAAGAACACTTTTTTCCTTTGTCCTTGTCTCGCGCCTGGC HS_haplotype2 TCAGCCCCAGTCTCGACCATGAAGAACACATTTTTCCTTTGTCCTTGTCTCGCGCCTGGC ***************************** ****************************** HS_haplotype1 CGTCACTCCTTATAGGGACAAACCAGCTATGGTGACGGAGAAGCTTCGCGATTCTAAATC HS_assemblymutate CGTCACTCCTTATAGGGACAAACCAGCTATGGTGACGGAGAAGCTTCGCGATTCTAAATC HS_haplotype2 CGTCACTCCTTATAGGGACGACCCAGCTATGGTGACGGAGAAGCTTCGCGATTCTAAATC ******************* * ************************************** HS_haplotype1 TGTTGGGTGCCAGACTGAGGTTAAAGAGAATCAATCTAATTCCTTGGGATTTGGCTCCTA HS_assemblymutate TGTTGGGTGCCAGGCTGAGGTTAAAGAGAATCTATCTAATTCCTTGGGATTTGGCTCCTA HS_haplotype2 TGTTGGGTGCCAGGCTGAGGTTAAAGAGAATCTATCTAATTCCTTGGGATTTGGCTCCTA ************* ****************** *************************** HS_haplotype1 TGGAATGAACTGAATCCCATCAGATGCTGCTCCTTGGAAAATTTAAATCAAGTGCTTCTG HS_assemblymutate TGGAATGAACTGAATCCCATCAGATGCTGCTCCTTGGAAAATTTAAATCAAGTGCTTCTG HS_haplotype2 TGGAATGAACTGAATCCCATCAGATGCTGCTCCTTGGAAAATTTAAATCAAGTGCTTCTG ************************************************************ HS_haplotype1 GGAAAAAAATAATACCCTCTGTTCGACCCGGCAGCGATTCCCTAGCCCAAACCAATAAAA HS_assemblymutate GGCAAAAAATAATACCCTCTGTTCGACCCGGCAGCGATTCCCTAGCCCAAACCAATAAAA HS_haplotype2 GGCAAAAAATAATACCCTCTGTTCGACCCGGCAGCGATTCCTTAGCCCAAACCAATAAAA ** ************************************** ****************** HS_haplotype1 ACACCCGAGAGAATGGGGCGTGTCCTAGGTTCTCATTAGCAATTTTTGAGTCAGTGTGAA HS_assemblymutate ACACCCGAGAGAATGGGGCGTGTCCTAGGTTCTCATTAGCAATTTTTGAGTCAGTGTGAA HS_haplotype2 ACACCCGAGAGAATGGGGCGTGTCCTAGGTTCTCATTAGCAATTTTTGAGTCAGTGTGAA ************************************************************ HS_haplotype1 CACTTTGACAGGAAGGGGATGAAAATAAAACCCTTCCGAAATAATAGTTTCTGAGGCAGC HS_assemblymutate CACTTTGACAGGAAGGGGATGAAAATAAAACCCTTCCGAAATAATAGTTTCTGAGGCAGC HS_haplotype2 CACTTTGACAGGAAGGGGATGAAAATAAAACCCTTCCGAAATAATAGTTTCTGAGGCAGC ************************************************************ HS_haplotype1 TCCAGAATTTAGTAATTGGTTGAAAATGTACGTGCCTTTCCATTGAAAGCTCAACATTCT HS_assemblymutate TCCAGAATTTAGTAATTGGTTGAAAATGTACGTGCCTTTCCATTGAAAGCTCAACATTCT HS_haplotype2 TCCAGAATTTAGTAATTGGTTGAAAATGTACGTGCCTTTCCATTGAAAGCTCAACACTCT ******************************************************** *** HS_haplotype1 GAAGTTTCAGGGTGACCTTGGCTGTCATATTTTCAAAAGGCCGAGGCGCAGACTGAGGGG HS_assemblymutate GATGTTTCAGGGTGACCTTGGCTGTCATATTTTCAAAAGGCCGAGGCGCAGACTGAGGGG HS_haplotype2 GATGTTTCAGAGTGACCTTGGTTGTCATATTTTCACAAGGCCGAGGCGCAGACTGAGGGG ** ******* ********** ************* ************************ HS_haplotype1 TCCCTGACTGCCTCGGGCCTGGTATCCACAGTTTGGAAGATTAACATGTTAATGTGATTA HS_assemblymutate TCCCTGACTGCCTCGGGCCTGGTATCCACAGTTTGGAAGATTAACATGTTAATGTGATTA HS_haplotype2 TCCCTGACTGCCTCCGGCCTGGAATCCACAGTTTGGAAGATTAACATGTTAGTGTGATTA ************** ******* **************************** ******** HS_haplotype1 CAGCTACCAGGCAGATTCAGTTACTTGAAATGTGGCGCAGCACAGGCGGAGTGGAAGCAC HS_assemblymutate CAGCTACCAGGCAGATTCAGTTACTTGAAATGTGGCGCAGCACAGGCGGAGTGGAAGTAC HS_haplotype2 CAGCTACCAGGCAGATTCAGTTACTTGAAATGTGGCGCAGCACAGGCGGAGTGGAAGTAC ********************************************************* ** HS_haplotype1 GAGCCATGTAAGTAAACATTATATCACTGAAGATTCTCAGGAAGCTTTTCTCATCCATTC HS_assemblymutate GAGCCATGTAAGTAAACATTATATCACTGAAGATTCTCAGGAAGCTTTTCTCATCCATTC HS_haplotype2 GAGCCATGTAAGTAAACATTATATCACTGAAGATTCTCAGGAAGCTTTTCTCATCCATTC ************************************************************ HS_haplotype1 ACTTTTACACAAATGGTGGAGTTGGAAACCCAACATTTCAGTCTCAAGTTTTACAGAATG HS_assemblymutate ACTTTTACACAAATGGTGGAGTTGGAAACCCAACATTTCAGTCTCAAGTTTTACAGAATG HS_haplotype2 ACTTTTACACAAATGGTGGAGTTGGAAACCCAACATTTCAGTCTCAAGTTTTACAGAATG ************************************************************ HS_haplotype1 TTC----CCAAATGTGATTTAACCAGCATCCCACGCCCAAGATGCCAAGGAATTAGACAA HS_assemblymutate TTCCGCGCCAAATGTGATTTAACCAACATCCCACGCCCAAGATGCCAAGGAATTAGACAA HS_haplotype2 TTC----CCAAATGTGATTTAACCAACATCCCACGCCCAAGATGCCAAGGAATTAGACAA *** ****************** ********************************** HS_haplotype1 TACGTGTGTGAGCTTCTCTAAACAATCCTAGGAAGTGCAGACCCTCCCAGCAGTGACTAC HS_assemblymutate TACGTGTGTGAGCTTCTCTAAACAATCCTAGGAAGTGCAGACCCTCCCAGCAGTGACTAC HS_haplotype2 TACGTGTGTGAGCTTTTCTAAACAATCCTAGAAAGTGCATACCCTCCCAGGAGGGACTAC *************** *************** ******* ********** ** ****** HS_haplotype1 TTCTTTTAAAAAGCAAGACCACCGCCTGACTAAAGGTTTACTAAGGCCCTGTCTGGGATT HS_assemblymutate TTCTTTTAAAAAGCAAGACCACCGCCTGACTAAAGGTTTACTAAGGCCCTGTCTGGGATT HS_haplotype2 TTCTTTTAAAAAGCAAGACCACCGCCTGACTAAAGGTTTACTAAGGCCCTGTCTGGGATT ************************************************************ HS_haplotype1 TGATATGTGCCCCAGACCAGCCCCTGCCTGGAGAAGAAGTGGCTCCCCTATTTAAAAGAT HS_assemblymutate TGATATGTGCCCCAGACCAGCCCCTGCCTGGAGAAGAAGTGGCTCCCCTATTTAAAAGAT HS_haplotype2 TGATATGTGCCCCAGACCAGCCCCTGCCTGGAGAAGAACTGGCTCCCCTATTTAAAAGAT ************************************** ********************* HS_haplotype1 TACTGAGAGTAAGTATTTGATTTGTGTTGTGTGCCTAGGCGCGGTCATGGCTCACCACAC HS_assemblymutate TACTGAGAGTAAGTATTTGATTTGTGTTGTGTGCCTAGGCGCGGTCATGGCTCACCACAC HS_haplotype2 TACTGAGAGTAAGTATTTGATTTGTGTTGTGTGCCTAGGCGCGGGCATGGCTCACCACAC ******************************************** *************** HS_haplotype1 TGGGACTCGACCGCCCGGGAGAATTAAGAAATAGCCCAGAAATTACTTTGCTTAGGGAAC HS_assemblymutate TGGGACTCGACCGCCCGGGAGAATTAAGAAATAGCCCAGAAATTACTTTGCTTAGGGAAC HS_haplotype2 TGGGACTCGACCGCCCGGGAAAATTAAGAAATAGCCCAGAAATTACTTTGCTTAGGGAAC ******************** *************************************** HS_haplotype1 TATGGTGAAATATTTTTTTTGGACGGAAGGCCCTGAGGGATTATTTAATTGGACCCACCT HS_assemblymutate TATGGTGAAATATTTTTTTTGGACGGAAGGCCCTGAGGGATTATTTAATAGGACCCACCT HS_haplotype2 TATGGTGAAATATTTTTTTTGGACGGAAGGCCCTGAGGGATTATTTAATAGGACCCACCT ************************************************* ********** HS_haplotype1 AACCGGCCTCAGGTGACTGTGTGTAGCCAGATGTTTGTTTCATTCAGAGCCCCTGTAGTC HS_assemblymutate AACCGGCCTCAGGTGACTGTGTGTAGCCAGATGTTTGTTTCATTCAGAGCCCCTGTAGTC HS_haplotype2 AACCGGCCTCAGGTGACTGTGTGTAGCCAGATGTATGTTTCATTCAGAGCCCCTGTAGTC ********************************** ************************* HS_haplotype1 AGCTTTGAGTATGGATGCCCCTTCTCAGTGAGCTCCAACTGCTTTCCAAATGCCTCAGGA HS_assemblymutate AGCTTTGAGTATGGATGCCCCTTCTCAGTGATCTCCAACTGCTTTCCAAATGCCTCAGGA HS_haplotype2 AGCTTTGAGAATGGATGCCCCTTCTCAGTGATCTCCAACTGCTTTCCAAATGCCTCAGGA ********* ********************* **************************** HS_haplotype1 TGGGATTTCAACAAGAATTAGATTTTTTTCAGCCCTCGGCTGGACCCATTTCAGAGAATT HS_assemblymutate TGGGATTTCAACAAGAATTAGATTTTTTTCAGCCCTCGGCTGGACCCATTTCAGAGAATT HS_haplotype2 TGGGATTTAAACAAGAATTAGATTTTTTTCAGCCCTCGGCTGGACCCATTTCAGAGAATT ******** *************************************************** HS_haplotype1 TAATTTGTGTGGTGTGTCTCTAACAGTGGGGAATTATCTCTAACTGCAGCTGGCTGCTGA HS_assemblymutate TAATTTGTGTGGTGTGTCTCTAACAGTGGGGAATTATCTCTAACTGCAGCTGGCTGCTGA HS_haplotype2 TAATTTGTGTGGTGTGTCTCTAACAGTGGGGAATTATCTCTAACTGCAGCTGGCTGCTGA ************************************************************ HS_haplotype1 GATCAGTAATAGTGGTGGGTAACAGAAATCTTGTTTTCCATGAGATATAAGTGACTTGTG HS_assemblymutate GATCAGTAATAGTGGTGGGTAACAGAAATCTTGTTTTCCATGAGATATAAGTGACTTGTG HS_haplotype2 GATCAGTAATAGTGGTGGTTAACAGAAATGTTGTTTTCCATGAGATATAAGTGACTTGTG ****************** ********** ****************************** HS_haplotype1 TTTGTTGTTAATCATGACCTAGGCTGAGCTAGCCATGCAGACTCCAGGAGTTCTCATTAT HS_assemblymutate TTTGTTGTTAATCATGACCTAGGCTGAGCTAGCCATGCAGACTCCAGGAGTTCTCATTAT HS_haplotype2 TTTGTTGTTAATCATGACCTAGGCTCAGCTAGCCATGCAGACTCCAGGAGTTCTCATTAT ************************* ********************************** HS_haplotype1 AGATTCTCAAAAGTAGTGTATTTCCTGCTCGCTCGGAGCCAGAGACTGATACTTAGCTTT HS_assemblymutate AGATTCTCAAAAGTAGTGTATTTCCTGCTCGCTCGGAGCCAGAGACTGATACTTAGCTTT HS_haplotype2 AGATTCTCAAAAGTAGTGTATTTCCTGCTCGCTCGGAGCCAGAGACTGATACTTAGCTTT ************************************************************ HS_haplotype1 TGTAAAAGTAGCAGAGTCTCTATTAGGTGGTGGAAGCAAGGTTGCCCTCGTGGGCGTGAG HS_assemblymutate TGTAAAAGTAGCAGAGTCTCTATTAGGTGGTGGAAGCAAGGTTGCCCTCGTGGGCGTGAG HS_haplotype2 TGTAAAAGTAGCAGAGTCTCTATCAGGTGGTGGAAGCAAGGTTGCCCTCGTGGGCGTGAG *********************** ************************************ HS_haplotype1 TCTCGAGGGTTTTACCGAAATGACGTGACACAGTGCCTGAAACTATATGATGATTGCCCA HS_assemblymutate TCTCGAGGGTTTTACCGAAATGACGTGACACAGTGCCTGAAACTATATGATGATTGCCCA HS_haplotype2 TCTCGAGGGTTTTACCGAAATGACGTCACACAGTGCCTGAAACTATATGATGATTGCCCA ************************** ********************************* HS_haplotype1 CCTTTGCAATCAAGGCCAAGAAGGCGGGAGGAAAGTCAATTGTGTCAAAAAGAATGGCTC HS_assemblymutate CCTTTGCAATCAAGGCCAAGAAGGCGGGAGGAAAGTCAATTGTGTCAAAAAGAATGGCTC HS_haplotype2 CCTTTGCAATCAAGGCCAAGAAGGCGGGAGGAAAGTCAATTGTGTCAAAAAGAATGGCTC ************************************************************ HS_haplotype1 CTGAGGTTCGAGAGCATCTATATACACATCTTCGGGAGGAGAGACATGGTCTGGGAAGTT HS_assemblymutate CTGAGGTTCGAGAGCATCTATATACACATCTTCGGGAGGAGAGACATGGTCTGGGAAGGT HS_haplotype2 CTGAGGTTCGAGAGCATCTATATACACATCTTCGGGAGGAGAGACATGGTCTGGGAAGGT ********************************************************** * HS_haplotype1 GTCCGGCCGTCTTAGGTTCAAGCTCACTACCTGACTGCAACGTTGGCACTTAGATGAAAC HS_assemblymutate GTCCGGCCGTCTTAGGTTCAAGCTCACTACCTGACTGCAACGTTGGCACTTAGATGAAAC HS_haplotype2 GTCCGGCCGTCTTAGGTTCAAGCTCACTACCTGACTGCAACGTTGGCACTTAGATGAAAC ************************************************************ HS_haplotype1 GGTGAAGTCACATCTTAAAGGTCTCACTTGAGAGCGGTAGGTGAGCACAGTAAAACTGCT HS_assemblymutate GGTGAAGTCACATCTTAAAGGTCTCACTTGAGAGCGGTAGGTGAGCACAGTAAAACTGCT HS_haplotype2 GGTGAAGTCACATCTTAAAAGTCTCACTTGAGAGCGGTAGGTGAGCACAGTAAAACTGCT ******************* **************************************** HS_haplotype1 ATTTTATAAAATTAAATGCTTGATGAAGCCATCGTAAGGGCCTATGCAAATATCTGGGGA HS_assemblymutate ATTTTATAAAATTAAATGCTTGATGAAGCCATCGTAAGGGCCTATGCAAATATCTGGGGA HS_haplotype2 ATTTTATAAAATTAAATGCTTGATGAAGCCATCGTAAGGGCCTATGCAAATATCTGGGGA ************************************************************ HS_haplotype1 AAAGGATCAGATAGGTCGCTCTGATAGAGGCCGCGGGCCCTGTTAAAGGTTTTTGTTGAT HS_assemblymutate AAAGGATCAGATAGGTCGCTCTGATAGAGGCCGCGGGCCCTGTTAAAGGTTTTTGTTGAT HS_haplotype2 AAAGGATCAGATAGGTCGCTCTGATAGAGGCCGCGGGCCCTGTTAAAAGTTTTTGTTGAT *********************************************** ************ HS_haplotype1 GAGCTGTCTGTAATGTAATAGTAGTTTTTACCCAGCCTGCCCTTAGCTCCTGCCCGGGTA HS_assemblymutate GAGCTGTCTGTAATGTAATAGTAGTTTTTACCCAGCCTGCCCTTAGCTCCTGCCCGGGTA HS_haplotype2 GAGCTGTCTGTAGTGTAATAGTAGTTTTTACCCAGCCTGCCCTTAGCTCCTGCCCGGTTA ************ ******************************************** ** HS_haplotype1 TGGTACGCTGCTCTCCTATCCACGCCTGGTCTTATAAAATGCATAGAGGATCAGAAAAAT HS_assemblymutate TGGTACGCTGCTCTCCTATCCACGCCTGGTCTTATAAAATGCATAGAGGATCAGAAAAAT HS_haplotype2 TGGTAGGCTGCTCTCCTATCCACGCCTGGTCTTATAAAATGCATAGAGGATCAGAAAAAT ***** ****************************************************** HS_haplotype1 TTATTTTTGGATAGGAAGTGCTGCTGCATTCCGGTGGCAGGCTGATCCCTTTTCCTTATC HS_assemblymutate TTATTTTTGGATAGGAAGTGCTGCTGCATTCCGGTGGCAGGCTGATCCCTTTTCCTTATC HS_haplotype2 TTATTTTTGGATAGGAAGTGCTGCTGCGTTCCGGTGGCAGGCTGACCCCTTTTCCTTATC *************************** ***************** ************** HS_haplotype1 AGGATGAGTTCCAAGACGAGATGGATAGCTGTGTGGAAAATTTTACCCAAATTTTCTATA HS_assemblymutate AGGATGAGTTCCAAGACGAGATGGATAGCTGTGTGGAAAATTTTACCCAAATTTTCTATA HS_haplotype2 AGGATGAGTTCCAAGACGAGATGGATAGCTGTGTGGAAAATTTTACCCAAATTTTCTATA ************************************************************ HS_haplotype1 TAATTTCAGAGAGATGCGGCCCCGGGCAGAAACTGAGGCCCACCTAAAATACCCAGAGGG HS_assemblymutate TAATTTCAGAGAGATGCGGCCCCGGGCAGAAACTGAGGCCCACCTAAAATACCCAGAGGG HS_haplotype2 TAATTTCAGAGAGATGCGGCCCCGGGCAGAAACTGAGGCCCACCTAAAATACCCAGAGGG ************************************************************ HS_haplotype1 CCGAGTGATTTGACATGCCACGAATAACTCTGTCTCTAGGAACTGTAATCTTCAAAGAAG HS_assemblymutate CCGAGTGATTTGACATACCACGAATAACTCTGTCTCTAGGAACTGTACTCTTCAAAGAAG HS_haplotype2 CCGAGTGATTTGACATACCACGAATAACTCTGTCTCTAGGAACTGTACTCTTCAAAGAAG **************** ****************************** ************ HS_haplotype1 TTAAAAAGGGATTTCTAGTCAGATGAGGCTTTGAAATGGGATGAGCGCCGGGCCAGCACT HS_assemblymutate TTAAAAAGGGATTTCTAGTCAGATGAGGCTTTGAAATGGGATGAGCGCCGGGCCAGCACT HS_haplotype2 TTAAAAAGGGATTTCTAGTCAGATGAGGCTTTGAAATGGGATGAGCGCCGGGCCAGCACT ************************************************************ HS_haplotype1 ACACTTTTTTCTTTATTCAAGGGAACCAGCTGGAGCGTTTGAGGAGATAACAAGAGAAAT HS_assemblymutate ACACTTTTTTCTTTATTCAAGCGAACCAGCTGGAGTGTTTGAGGAGATAACAAGAGAAAT HS_haplotype2 ACACTTTTTTCTTTATTCAAGCGAACCAGCTGGAGTGTTTGAGGAGATAACAAGAGAAAT ********************* ************* ************************ HS_haplotype1 TGAATAAACCCTCTTCACAGAAAAAAGCAATACAAATCAATTACGTTCCAGCCTCAAAAG HS_assemblymutate TGAAAAAACCCTCTTCACAGGAAAAAGCAATACAAATCAATTAAGTTCCAGCCTCAAAAG HS_haplotype2 TGAAAAAACCCTCTTCACAGGAAAAAGCAATACAAATCAATTAAGTTCCAGCCTCAAAAG **** *************** ********************** **************** HS_haplotype1 TGACTTTGGCTCTTGGGATATGTACACTTCAGCCCTCAATTTTTCAGTTTGCTGCTTTGA HS_assemblymutate TGACTTTGGCTCTTGGGATATGTACACTTCCGCCCTCAATTTTTCAGTTTGCTGCTTTGA HS_haplotype2 TGACTTTGGCTCTTGGGATATGTACACTTCCGCCCTCAATTTTTCAGTTTGCTGCTTTGA ****************************** ***************************** HS_haplotype1 AAATCAGATGATTTCAGATGTGTCAAAAATTCAAGTTTTTATCATTCTAAAGTTCTAGCT HS_assemblymutate AAATCAGATGATTTCAGATGTGTCAATAATTCAAGTATTTATCATTCTAAAGTTCTAGCT HS_haplotype2 AAATCAGATGATTTCAGATGTGTCAATAATTCAAGTATTTATCATTCTAAAGTTCTAGCT ************************** ********* *********************** HS_haplotype1 ATGCTCCCATTCATTTTATGATTCATCTACTAAAATACTTATAAACTTTAATTAAAACTT HS_assemblymutate ATGCTCCCATTCATTTTATGATTCATCTACTAAAATACTTATAAACTTTAATTAAAACTT HS_haplotype2 ATGCTCCCATTCATTTTATGATTCATCTACTAAAATACTTATAAACTTTAATTAAAACTT ************************************************************ HS_haplotype1 TTCAAAGGAAATCCAGACATCACTTCTCTTATTTAAAGTTCTTATAAACAGTATGCTACT HS_assemblymutate TTCAAAGGAAACCCAGACATCACTTCTCTTATTTAAAGTTCTTATAAACAGTATGCTACT HS_haplotype2 TTCAAAGGAAACCCAGACATCACTTCTCTTATTTAAAGTTCTTATAAACAGTATGCTACT *********** ************************************************ HS_haplotype1 AATCCCATATGGATGACAGCGTAAGGCTGGTCCTAGAACATCTTGCTCCTATGGTGTTTT HS_assemblymutate AATCCCATATGGATGACAGCGTAAGGCTGGTCCTAGAAGATCTTGCTCCTATGGTGTTTT HS_haplotype2 AATCCCATATGGATGACAGCGTAAGGCTGGTCCTAGAAGATCTTGCTCCTATGGTGTTTT ************************************** ********************* HS_haplotype1 TTTTTTATTTTGAAATTGATATTATTCCTCAGATTCTGCCCTACAACCTCCCATGACAAT HS_assemblymutate TTTTTTATTTTGAAATTGATATTATTCCTCAGATTCTGCCCTACAACCTCCCATGACAAT HS_haplotype2 TTTTTTATTTTGAAATTGATAATATTCCTCAGATTCTGGCCTACAACCTCCCATGATCAT ********************* **************** ***************** ** HS_haplotype1 TCCCCAGTAGAGAACCCACCTGCCCACCATTCTTTGCAAACATACACCCAAGACATCTGA HS_assemblymutate TCCCCAGTAGAGAACCCACCTGCCCATCATTCTTTGTAAACATACACCCAAGACATCTGA HS_haplotype2 TCCCCAGTAGAGAACCCACCTGCCCATCATTCTTTGTAAACATACACCCAAGACATCTGA ************************** ********* *********************** HS_haplotype1 TGCAGCCTGTTCCAAACATGGGAGAAACCACGTTGCATACGAGCGCAAGCTCTCAATAAA HS_assemblymutate TGCAGCCTGTTCCAAACATGGGAGAAACCACGTTACATACGAGCGCAAGCTCTCAATAAA HS_haplotype2 TGCAGCCTGTTCCAAACATGGGAGAAACCACGTTACATACGAGCGCAAGCTCTCAATAAA ********************************** ************************* HS_haplotype1 CCTTTCTTCTCAGCCACAATCCTTGAGATCCAAATGAATCGCTCGGGTGCTGTGGGGACC HS_assemblymutate CCTTTCTTCTCAGCCACATTCCTTGAGATCCAAATGAATCGCTCGGGTGCTGTGGGGACC HS_haplotype2 CCTTTCTTCTCAGCCACATTCCTTGAGATCCAAATGAATCGCTCGGGTGCTGTGGGGACC ****************** ***************************************** HS_haplotype1 AGGCTAGGGCTCACTGAATCTGAGGCGTGGCTATTGTCAGTCTCAGCTCAGGCGCAAGCC HS_assemblymutate AGGCTAGGGCTCACTGAATCTGAGGCGTGGCTATTGTCAGTCTCAGCTCAGGCGCAAGCC HS_haplotype2 AGGCTAGGTCTCACTGAATCTGGGGCGTGGCTATTGTCAGTCTCAGCTCGGGCGCAAGCC ******** ************* ************************** ********** HS_haplotype1 TGGAAATTATAAACGTTACCATGTATTGGATCCTGGGAGGTCAGAAACATCACCCCCATT HS_assemblymutate TGGAAATTATAAACGTTACCATGTATTGGATCCTGGGAGGTCAGAAACATCACCCCCATT HS_haplotype2 TGGATATTATAAACGTTACCATGTATTGGATCCTGGGAGGTCAGAAACATCACCCCCATT **** ******************************************************* HS_haplotype1 GGCCTCACTTACGAAACTGCTGTGCACGTACCTTTCCTCCGGCTCTCGCTGACAAAAAGG HS_assemblymutate GGCCTCACTTACGAAACTGCTGTGCACGTACCTTTCCTCCGGCTCTCGCTGACAAAAAGG HS_haplotype2 GGCCTTACTTACGAAACTGCTGTGCACGTACCTTTCCTCCGGCTCTCGCTGACAAAAAGG ***** ****************************************************** HS_haplotype1 CAATGTCACAAATACAAAAATTGCTATTGTGCTGGGAAGTCTACTTACAATTGAAGCATT HS_assemblymutate CAATGTCACAAATACAAAAATTGCTATTGTGCTGGGAAGTCTACTTACAATTGAAGCATT HS_haplotype2 CAATGTCACAAATACAAAAATTGCTATTGTGCTGGGAAGTCTACTTACAATTGAAGCATT ************************************************************ HS_haplotype1 TTGCAGTTGGGAGAGCTTCTGAGTTCAATTAGCAGCCTGGAGAGAAGACAATTAAGTTTA HS_assemblymutate TTGCAGTTGGGAGAGCTTCTGAGTTCAATTAGCAGCCTGGAGAGAAGACAATTAAGTTTA HS_haplotype2 TTGCAGTTGGGAGAGCTTCTGAGTTCAATTAGCAGTCTGGAGAGAAGACAATTAAGTTAA *********************************** ********************** * HS_haplotype1 AATATTCCTATTTCTTACAGTCTTTGTTAAGCTGGGCTTCATTTCTCCATGAGTGCCTCA HS_assemblymutate AATATTCCTATTTCTTACAGTCTTTGTTAAGCTGGGCTTCATTTCTCCATGAGTGCCTCA HS_haplotype2 AATATTCCTATTACTTACAGTCTTTGTTAAGCTGGGCTTCATTTCTCCATGAGTGCCTCA ************ *********************************************** HS_haplotype1 CTGTTGGGACTAAAATTAGCTTCCAGGCGTGAGAAGAGATCATCTGGGCAGACCGCAGCC HS_assemblymutate CTGTTGGGACTAAAATTAGCTTCCAGGCGTGAGAAGAGATCATCTGGGCAGACCGCAGCC HS_haplotype2 CTGTTGGGACTAAAATTAGCTTCCAGGCGTGAGAAGAGATCATCCGGGCAGACCGCAGCC ******************************************** *************** HS_haplotype1 CTTGACTTGCGCTGCTTTTATAATGGCGTTATTTAGTTTCCTTCTTTTAATTTATTTGCT HS_assemblymutate CTTGACTTGGGCTGCTTTTATAATGGCGTTATTTAGTTTCCTTCTTTTAATTTATTTGCT HS_haplotype2 CTTGACTTGGGCTGCTTTTATAATGGCATTATTTAGTTTCCTTCTTTTAATTTATTTGCT ********* ***************** ******************************** HS_haplotype1 GGGTGGCCGAGTAAGTTCACTGTCAAAAAAATATGTATCCCCAGGCTATCCACCCTGAGC HS_assemblymutate GGGTGGCCGAGTAAGTTCACTGTCAAAAAAATATGTATCCCCAGGCTATCCACCCTGAGC HS_haplotype2 GGGTGGCCGAGTAAGTTCACTGTCAAAAAAATATGTATCCCCAGGCTATCCACCCTGAGC ************************************************************ HS_haplotype1 CACACAGGCTGCAGGATTATGCTCAAACTGAGTAATTGTAATATAAAATTTTATACTTTT HS_assemblymutate CACACAGGCTGCAGGAATATGCTCAAACTGAGTAATTGTAATATAAAATTTTATACTTTT HS_haplotype2 CACACAGGCTGCAGGAATATGCTCAAACTGAGTATTTGTAATATAAAATTTTATACTTTT **************** ***************** ************************* HS_haplotype1 CATGTGCT-GTGCACCTTGGCTCTGGTTTCAAAAAGATTTTTTCTGTCAGGTAGAGATGC HS_assemblymutate CATGTGCTAGTGCACCTTGGCTCTGGTTTCAAAAAGATTTTTTCTGTCAGGTAGAGATGC HS_haplotype2 CATGTGCT-GTGCACCCGGGCTCTGGTTTCAAAAAGATTTTTTCTGTCAGGTAGAGATGC ******** ******* ****************************************** HS_haplotype1 AGCCTGGCTGGGCCCTCTTTATCTGATGTGTGGCAATCCTACCAACACACTACGGATGGT HS_assemblymutate AGCCTGGCTGGGCCCTCTTTATCTGATGTGTGGCAATCCTACCAACACACTGCGGATGGT HS_haplotype2 AGCCTGGCTGGGCCCTCTTTATCTGATGTGTGGCAATCCTACCAACACACTGCGGATGGT *************************************************** ******** HS_haplotype1 CAGGTGGTGTGTTGCACAGAGATGCCCTTTCAAACGGAGCTGGTTCAACTCTAGGAATAT HS_assemblymutate CAGGTGGTGTGTTGCACAGAGATGCCCTTTCAAACGGAGCTGGTTCAACTCTAGGAATAT HS_haplotype2 CAGGTGGTGTGTTGCACAGAGATGCCCTTTCAAACGGAGCTGGTTCAACTCTAGGAATAT ************************************************************ HS_haplotype1 ACACCAGCCTCAAAGCTCTCCGCGGGGCCAGAATTTACTGGCATAGCACCATGAGGCCCC HS_assemblymutate ACACCAGCCTCAAAGCTCTCCGCGGGGCCAGAATTTACTGGCATAGCACCATGAGGCCCC HS_haplotype2 ACACCAGCCTCAAAGCTCTCCGCGGGGCCAGAATTTACTGGCATAGCACCATGAGGCCCC ************************************************************ HS_haplotype1 AAGCTCAGAAACAAAGAGTTCTCCTTTGCTGACCACGCAGAATTTTCCCTTATCATGACC HS_assemblymutate AAGCTCAGAAACAAAGAGTTCTCCTTTGCTGACCACGCAGAATTTTCCCTTATCATGACC HS_haplotype2 AAGCTCAGAAACAAAGAGTTCTCCTTTGCTGACCACGCAGAATTTTCCCTTATCATGACC ************************************************************ HS_haplotype1 CGGGAACCAGAGCAAACCAGTCATAAAAGAAGTCATTCAAACGTAGGTAGTGTGTCCCCG HS_assemblymutate CGGGAACCAGAGCACACCAGTCATAAAAGAAGTCATTCAAACGTAGGTAGTGTGTCCCCG HS_haplotype2 CGGGAACCAGAGCACACCAGTCATAAAAGAAGTCATTCAAACGTAGGTAGTGTGTCCCCG ************** ********************************************* HS_haplotype1 ATCTTTCCTAAACCTCCCAGCGCGTTCACTAACAAAAATTCTGTTTTTGAGTAATACAGA HS_assemblymutate ATCTTTCCTAAACCTCCCAGCGCGTTCACTAACAAAAACTCTGTTTTTGAGTAATACAGA HS_haplotype2 ATCTTTCCTAAACCTCCCAGCGCGTTCACTAACAAAAACTCTGTTTTTGAGTAATACAGA ************************************** ********************* HS_haplotype1 GAGGAAATCCCATCTCAGAAAGTGAGAGCACTCAGGGTTTCCCTCAGCTTGTCAAATTGG HS_assemblymutate GAGGAAATCCCATCTCAGAAAGTGAGAGCACTCAGGGTTTCCCTCAGCTTGTCAAATTGG HS_haplotype2 GAGGAAATCCCATCTCAGAAAGTGAGAGCACTCAGGGTTCCCCTCAGCTTGTCAAATTGT *************************************** ******************* HS_haplotype1 ACAAATTGTCCATAAATTCATAAATGAAAATGATGCAAGAGGAGGGGGCATCTATTTTCC HS_assemblymutate ACAAATTGTCCATAAATTCATAAATGAAAATGATGCAAGAGGAGGGGGCATCTATTTTCC HS_haplotype2 ACAAATTGTCCATAAATTCATAAATGAAAATGATGCAAGAGGAGGGGGCATCTATTTTCC ************************************************************ HS_haplotype1 CCTTTTACAAATTAATTACCTGGGCGCGGTGAAGTCAATTGTTTTTAGGACCATCCCTTT HS_assemblymutate CCTTTTACAAATTAATTACCTGGGCGCGGTGAAGTCAATAGTTTTTAGGACCATCCCTTT HS_haplotype2 CCTTTTACAAATTAATTACCTGGGCGCGGTGAAGTCAATAGTTTTTAGGACCATCCCTTT *************************************** ******************** HS_haplotype1 TGTGTATTTGTAATGGAGGATTCTCAACAGAAACAGTCTCCACTTCAAAAACACCTTATG HS_assemblymutate TGTGTATTTGTAATGGAGGATTCTCAACAGAAACAGTCTCCACTTCAAAAACACCTTATG HS_haplotype2 TGTGTATTTGTAATGGAGGATTCTCAACAGAAACAGTCTCCACTTCAAAAACACCTTATG ************************************************************ HS_haplotype1 CTCTGCGGCAGAGAGAAGGAATTGTTCATAGCCACACTTTCTATCTATTGTGAACTTTGA HS_assemblymutate CTCTGCGGCAGAGAGAAGGAATTGTTCATAGCCACACTTTCTATCTATTGTGAACTTTGA HS_haplotype2 CTCTGCGGCAGAGAGAAGGAATTGTTCATAGCCACACTTTCTATCTTTTGTGAACTTTGA ********************************************** ************* HS_haplotype1 ATATAATAAAACAGTGAAGTTAATTTGAAGCAGCAAACATGGCTTGTCCCCATCATCTAA HS_assemblymutate ATATAATAAAACAGTGAAGTTAATTTGAAGCAGCAAACATGGCTTGTCCCCATCATCTAA HS_haplotype2 ATATAATAAAACAGTGAAGTTAATTTGAAGCAGCAAACATGGCTTGTCCCCATCATCTAA ************************************************************ HS_haplotype1 ATATTGTAGAACAAATACTTGTAGCTAATTTATTTCCAACTTAACCTATATACCTGAGGA HS_assemblymutate ATATTGTAGAACAAATACTTGTAGCTAATTTATTTCCAACTTAACCTATATACCTGAGGA HS_haplotype2 ATATTGTAGAACAAATACTTGTAGCTAATTTATTTCCAACTTAACCTATATACCTGAGAA ********************************************************** * HS_haplotype1 ATTCCACTATTCCACTGTAATCAGCCTGTAGAAACAAAAACCCAAAGAAACCCTGGCCCA HS_assemblymutate ATTCCACTATTCCACTGTAATCAGCCTGTAGAAACAAAAACCCAAAGAAACCCTGGCCCA HS_haplotype2 ATTCCACTATTCCACTGTAATCAGCCTGTAGAAACAAAAACCCAAAGAAACCCTGGCCCA ************************************************************ HS_haplotype1 TGGTATAACGGAGTGAGTAGCGCACACAAAAATGGGAGGGCCCTACCCTGTCACTGCGCC HS_assemblymutate TGGTATAACGGAGTGAGTAGCGCACACAAAAATGGGAGGGCCCTACCCTGTCACTGCGCC HS_haplotype2 TGGTATAACGGAGTGAGTAGCGCACACAAAAATGGGAGGGCCCTACCCTGTCACTGCGCC ************************************************************ HS_haplotype1 GTATAAAACTAGGATCTGTCACCAGCAAGTAGGTGGGCTCGACCCTCTGCAAGAATTTGG HS_assemblymutate GTATAAAACTAGGATCTGTCACCAGCAAGTAGGTGGGCTCGACCCTCTGCAAGAATTTGG HS_haplotype2 GTATAAAACTAGGATCTGTCACCAGCAAGTAGGTGGGCTCGACCCTCTGCAAGAATTTGG ************************************************************ HS_haplotype1 GTGGAGAAATGCTAGAATTACCTGATACCCCGGGGACCATGCAATTCCCCGACCCAGAAA HS_assemblymutate GTGGAGAAATGCTAGAATTACCTGATACCCCGGGGACCATGCAATTCCCCGACCCAGAAA HS_haplotype2 GTGGAGAAATGCTAGAATTCCCTGATACCCCGGGGACCATGCAATTCCCCGACCCAGAAA ******************* **************************************** HS_haplotype1 CCGTTCCTTAATAGCTTGGGTTTTATGTAAAGGGGTGGCCGAGCAGAGCTGGAGTTAATA HS_assemblymutate CCGTTCCTTAATAGCTTGGGTTTTATGTAAAGGGGTGGCCGAGCAGAGCTGGAGTTAATA HS_haplotype2 CCCTTCCCTAATAGCTTGGGTTTTATGTAAAGAGGTGGCCGAGCAGAGCTGGAGTTAATA ** **** ************************ *************************** HS_haplotype1 TGAACTTCCTGGAGGGAGCAATGTCTTGTTGTCTTATGCCCAGGTGGACCCAGGCTGCAT HS_assemblymutate TGAACTTCCTGGAGGGAGCAATGTCTTGTTGTCTTATGCCCAGGTGGACCCAGGCTGCAT HS_haplotype2 TGAACTTCCTGGAGGGAGCAATGTCTTGCTGTCTTATGCCCAGGTGGACCCAGGCTGCAT **************************** ******************************* HS_haplotype1 CTCGCTTTGAGATCTGAGCCAAAAACTAGCTCTCTGCCAAGTAAGTGGCAACATTCTATC HS_assemblymutate CTCGCTTTGAGATCTGAGCCAAAAACTAGCTCTCTGCCAAGTAAGTGGCAACATTCTATC HS_haplotype2 CTCGCTTTGAGATCTCAGCCAAAAACTAGCTCTCTGCCAAGTAAGTGGCAACATTCTATC *************** ******************************************** HS_haplotype1 CCCAGGAGTTTTACCTTTGATGCCAGATGAGGTACCAAGGAAAACTTATAGTATATTAAA HS_assemblymutate CCCAGGAGTTTTACCTTTGATGCCAGATGAGGTTCCAAGGAAAACTTATAGTATATTAAA HS_haplotype2 CCCAGGAGTTTTACCTTTGATGCCAGATGAGGTTCCAAGGAAAACTTATAGTATATTAAA ********************************* ************************** HS_haplotype1 CTAGAATAGAATCCCAAGTCACCCACCTCAGCCGGCTCCACAACAACAGCCTTTTCGCAC HS_assemblymutate CTAGAATAGAATCCCAAGTCACCCACCTCAGCCGGCACCACAACAACAGCCTTTTCGCAC HS_haplotype2 CTAGAATAGAATCCCAAGTCACCCACCTCAGCCGGCACCACAACAACAGCCTTTTCGCAC ************************************ *********************** HS_haplotype1 ATAGGAGGCTTCAAATACGACATATATACGAAAGAAAACCACGAGGCCCTAGTTATGGTT HS_assemblymutate ATAGGAGGCTTCATATACGACATATATACGAAAGAAAACCACGAGGCCCTAGTTATGGTT HS_haplotype2 ATAGGAGGCTTCATATACGACATATATACGAAAGAAAACCACGAGGCCCTAGTTATGGTT ************* ********************************************** HS_haplotype1 GCAGCTGGGCAGGCATGTCCATGCTTCCTAAAATCAAAACCAACCTTCCCCCGGGAGCCA HS_assemblymutate GCAGCTGGGCAGGCATGTCCATGCTTCCTAAAATCAAAACCAACCTTCCCCCGGGAGCCA HS_haplotype2 GCAGCTGGGCAGGCATGTCCATGCTTCCTAAAATCAAAACCAACCTTCCCCCGGGAGCCA ************************************************************ HS_haplotype1 GGTGGTCCCAGATCACGCCGCCTCAAATCATAGTGTGACTGGTGCCTAAGAAGGTTAAAT HS_assemblymutate GGTGGTGCCAGATCACGCCGCCTCAAATCATAGTGTGACTGGTGCCTAAGAAGGTTAAAT HS_haplotype2 GGTGGTGCCAGATCACGCCGCCTCAAATCATAGTGTGACTGGTGCCTAAGAAGGTTAAAT ****** ***************************************************** HS_haplotype1 GCTCAGCTCACGGGAGACTCACAGCAGGGAGTTCATCTCCTCAGCCTAGCCAGCCTTGGC HS_assemblymutate GCTCAGCTCACGGGAGACTCACAGCAGGGAGTTCATCTCCTCAGCCTAGCCAGCCTTGGC HS_haplotype2 GCTCAGCTCACGGGAGGCTCACAGCAGGGAGTTCATCTCCTCAGCCTAGCCAGCCTTGGC **************** ******************************************* HS_haplotype1 ACCATTTTGTTTATAGTTATCTGAGTAAAGAGAAGGTTACACTCATGCTGCCTGTATTGC HS_assemblymutate ACCATTTTGTTTATAGTTATCTGAGTAAAGAGAAGGTTACACTCATGCTGCCTGTATTGC HS_haplotype2 ACCATTTTGTTTATAGTTATCTGAGTAAAGAGAAGGTTACACTCATGCTGCCTGTATTGC ************************************************************ HS_haplotype1 CCACCAGATAGGTTTCACAGTCTGTGTGCAGCAGGAATAAATTAGGAGTGATACAAATTC HS_assemblymutate CCACCAGATAGGTTTCACAGTGTGTGTGCAGCAGGAATAAATTAGGAGTGATACAAATTC HS_haplotype2 CCACCAGATAGGTTTCACAGTGTGTGTGCAGCAGGAATAAATTAGGAGTGATACAAATTC ********************* ************************************** HS_haplotype1 AAAGAGGGTCGTCTCTACTCTGCCACCTCTCCCAGGCCCAGAAGCAATTATCTCTGCCCT HS_assemblymutate AAAGAGGGTCGTCTCTACTCTGCCACCTCTCCCAGGCCCAGAAGCAATTATCTCTGCCCT HS_haplotype2 AAAGAGGGTCGTCTCTACTCTGCCACCTCTCCCAGGCCCAGAAGCAATTATCTCTGCCCT ************************************************************ HS_haplotype1 ATGGCCCTGGTCTCAAGAATGAAGTGCATGATTTTCACCCAGCACCCAGTGGGTCAGTAG HS_assemblymutate ATGGCCCTGGTCTCAAGAATGAAGTGCATGATTTTCACCCAGCACCCAGTGGGTCAGTAG HS_haplotype2 ATGGCCCTGGTCTCAAGAATGCAGTGCATGAATTTCACCCAGCACCCAGTGGGTCAGTAG ********************* ********* **************************** HS_haplotype1 CTCCTGACCACTGTTGAAGCCATTCCAAGATGTCCCTCAGAAGCTTGGGGGCTCGGGCTT HS_assemblymutate CTCCTGACCACTGTTGAAGCCATTCCAAGATGTCCCTCAGAAGCTTGGGGGCTCGGGCTT HS_haplotype2 CTCCTGACCACTGTTGAAGCCATTCCAAGATGTCCCTCAGAAGCTTGGGGGCTCGGGCTT ************************************************************ HS_haplotype1 TAGAAAATAAATATATAACTACAAATTAGCTAAGTTTGCATCCTATATGTATAAGCTGTT HS_assemblymutate TAGAAAATAAATATATAACTACAAATTAGCTAATTTTGCATCCTATATGTATAAGCTGTT HS_haplotype2 TAGAAAATAAATATATAACTACAAATTAGCTAATTTTGCATCCTATATGTATAAGCTGTT ********************************* ************************** HS_haplotype1 TTGTGTAGCTAAGAGACCTGGGTTTGTCAAGGTTTTTCCTCCTCTGTTCAGCCTTGGGAG HS_assemblymutate TTGTGTAGCTAAGAGACCTGGGTTTGTCAAGGTTTTTCCTCCTCTGTTGAGCCTTGGGAG HS_haplotype2 TTGTGTAGCTAAGAGACCTGGGTTTGTCAAGGTTTTTCCTCCTCTGTTGACCCTTGGGAG ************************************************ * ********* HS_haplotype1 ATGAAAGGAATCAGAGTGCTTACCCCCTTGGCCTGTTCAGTGATACACAGCTCACCTAAC HS_assemblymutate ATGAAAGGAATCAGAGTGCTTACCCCCTTGGCCTGTTCAGTGATACACAGCTCACCTAAC HS_haplotype2 ATGAAAGGAATCAGAGTGCTTACCCCCTTGGCCTGTTCAGTGATACACAGCTCACCTAAC ************************************************************ HS_haplotype1 ACTCAGTCCCCATGGCATATTGGTTGGTGTAATTCACTTGTTTTGCCACCAGTTACCTAG HS_assemblymutate ACTCAGTCCCCATGGCATATTGGTTGGTGTAATTCACTTGTTTTGCCACCAGTTACCTAG HS_haplotype2 ACTCAGTCCCCATGGCATATTGGTTAGTGTAATTCACTTGTTTTGCCACCAGTTACCTAG ************************* ********************************** HS_haplotype1 CATCTTCTAAACTGCCAATACAAAAAAAAAATACTCCATCCTGCCTGTGCCTGACTCCCT HS_assemblymutate CATCTTCTAAACTGCCAATACAAAAAAAAAATACTCCATCCTGCCTGTGCCTGACTCCCT HS_haplotype2 CATCTTCTAAACTGCCAATACAAAAAAAAAATACTCCATCCTGCCTGTGCCTGACTCCCT ************************************************************ HS_haplotype1 CTGACTTGCCTCCGGCTACTCCCTACAGACCCCCGCCACCCGGCCGAGTGGGCGTTCCTT HS_assemblymutate CTGACTTGCCTCCGGCTACTCCCTACAGACCCCCGCCACCCGGCCGAGTGGGCGTTCCTT HS_haplotype2 CAGACTTGCCTCCGGCTACTCCCTACAGACCCCCGCCACCCGGCCGAGTGGGCGTTCCTT * ********************************************************** HS_haplotype1 TACAGATGGTGTGGTGGGAAGGGAATCAGTCTCCTGGAGCCCGGTGAATTCTTTTTAGTA HS_assemblymutate TACAGATGGTGTGGTGGGAAGGGAATCAGTCTCCTGGAGCCCGGTGAATTCTTTTTAGTA HS_haplotype2 TACAGATGGTGTGGTGGGAGGGGAATCAGTCTCCTGGAGCCCGGTGAATTCTTTTTAGTA ******************* **************************************** HS_haplotype1 AGGAAATCAGCAGCAATGTAACATGTTAATACAGGTTTGCAGGAAAGACGGGGAAAACAA HS_assemblymutate AGGAAATCATCAGCAATGTAACATGTTAATACAGGTTTGCAGGAAAGACGGGGAAAACAA HS_haplotype2 AGGAAATCATCAGCAATGTAACATGTTAATTCAGGTTTGCAGGAAAGACGGGGAAAACAA ********* ******************** ***************************** HS_haplotype1 CAATATAAAAAGACAAAAAGCAAGCAAATAAGCTGTAATCATAACAGAACCTGATTCACT HS_assemblymutate CAATATAAAAAGACAAAAAGCAAGCAAATAAGCCGTAATCATAACAGAACCTGATTCACT HS_haplotype2 CAATATAAAAATACAAAAAGCAAGCAAATAAGCCGTAATCATAACAGAACCTGATTCACT *********** ********************* ************************** HS_haplotype1 TAAGTAAGGAAATGGCCCCAGCGCATTTTCTCCTGTGGCTGGGTGCAGCAAAGTGGTTGC HS_assemblymutate TAAGTAAGGAAATGGCCCCAGCGCATTTTCTCCTGTGGCTGGGTGCAGCAAAGTGGTTGC HS_haplotype2 TAAGTAAGGAAATGGCCCCAGCGCATTTTCTCCTGTGGCTGGGTGCAGCAAAGTGGTTGC ************************************************************ HS_haplotype1 TAACTTAAGTTTTAAAAGTACTTTGGACTGTAAATAATGACTAGGCATCGCTCAAAAGAA HS_assemblymutate TAACTTAAGTTTTAAAAGTACTTTGGACTGTAAATAATGACTAGGCATCGCTCAAAAGAA HS_haplotype2 TAACTTAAGTTTTAAAAGTACTTTGGACTGTAAATAATGACTAGGCATCGCTCAAAAGAA ************************************************************ HS_haplotype1 TATCAGGAACGATAACTAAAATCATGTCTCACCATGAGCTTACTAGATCACTCCTGTGCC HS_assemblymutate TATCAGGAACGATAACTAAAATCATGTCACACCATGAGCTTACTAGATCACTCCTGTGCC HS_haplotype2 TATCAGGAACGATAACTAAAATAATGTCACACCATGAGCTTACTAGATCACTCCTGTGCC ********************** ***** ******************************* HS_haplotype1 ACAGCTAGGTCCACCTTTATATAGTAGATAGAGACTGTTTAATTGAAAACACTAGGTAAT HS_assemblymutate ACAGCTAGGTCCACCTTTATATAGTAGATAGAGACTGTTTAATTGAAAACACTAGGTAAT HS_haplotype2 ACAGCTAGGTCCACCTTTATATAGTAGATAGAGACTGTTTAATTGAAAACACTAGGTAAT ************************************************************ HS_haplotype1 GAGGGCCAGGGACTTTAAGGAGGTGGCCCTTCACAAGAAACAATCAAACAGCAAAGCCGA HS_assemblymutate GAGGGCCAGGGACTTTAAGGAGGTGGCCCTTCACAAGAAACAATCAAACAGCAAAGCCGA HS_haplotype2 GAGGGCCAGGGACTTTAAGGAGGTGGCCCTTCACAAGAAACAATCAAACAGCAAAGCCGA ************************************************************ HS_haplotype1 GATAATGAAAGGCTGGGGTACTAAGCCACCCAGCTACTGCGGTGGCTGGGATTATGCAGT HS_assemblymutate GATAATGAAAGGCTGGGGTACTAAGCCACCCAGCTACTGCGGTGGCTGGGATTATGCAGT HS_haplotype2 GATAATGAAAGGCTGGGGTACTAAGCCACCCAGCTACTCCGCTGGCTGGGATTATGCAGT ************************************** ** ****************** HS_haplotype1 GCCATTTAAGTCTATTATTGGATTGCCCGGCTGAGACTCAGCCCAGGAGTTCCACAGTCT HS_assemblymutate GCCATTTAAGTCTATTATTGGATTGCCCGGCTGAGACTCAGCCCAGGAGTTCCACAGTCT HS_haplotype2 GCCATTTAAGTCTATTATTGGATTGCCCGGCTGAGACTCAGCCCAGGAGTTCCACAGTCT ************************************************************ HS_haplotype1 CGGGCGTACAAAACAGTCACTGTTAGCTACATTTATTTTTTTGTCGCGTCGCCATTTTGA HS_assemblymutate CGGGCGTACAAAACAGTCACTGTTAGCTACATTTATTTTTTTGTCGCGTCGCCATTTTGA HS_haplotype2 CGGGCGTACAAAACAGTCACTGTTAGCTACATTTATTTTTTTGTCGCGTCGCCATTTTGA ************************************************************ HS_haplotype1 TTACTGTGAGACCAGGAGTTAGATTCCAGGGTGGCAGGGTTGTGTCCATCTGGAAGCATT HS_assemblymutate TTACTGTGAGACCAGGAGTTAGATTCCAGGGTGGCAGGGTTGTGTCCATCTGGAAGCATT HS_haplotype2 TTACTGTGAGACCAGGAGTTAGATTCCAGGGTGGCAGGGTTGTGTCCATCTGGAAGCATT ************************************************************ HS_haplotype1 GCCCAAGTGGATTGTAAAGACACTGAGCAATTTTATGAACCATCCTGCACCGCACCATTG HS_assemblymutate GCCCAAGTGGATTGTAAAGACACTGAGCAATTTTATGAACCATCCTGCACCGCACCATTG HS_haplotype2 GCCCAAGTGGCTTGTAAAGAAACTGAGCAATTTTATGAACCATCCTGCACCGCACCATTG ********** ********* *************************************** HS_haplotype1 AATGCAACCACTACTGACAGGGGAGGCAGCTAGGAGCGCCGGGTTGCTTTTTTCCTAAGT HS_assemblymutate AATGCAACCACTACTGACAGGGGAGGCAGCTAGGAGCGCCGGGTTGCTTTTTTCCTAAGT HS_haplotype2 AATGCAACCACTACTGACAGGGGAGGCAGCTAGGAGCGCCGGGTGGCTTTTTTCCTAAGT ******************************************** *************** HS_haplotype1 CTGACCTCTCACTCCCGAAAGACCCATCCCACTGCCCGTCTCGCTCTACTCCAGACCAGG HS_assemblymutate CTGACCTCTCACTCCCGAAAGACCCATCCCACTGCCCGTCTCGCTCTACTCCAGACCAGG HS_haplotype2 CTGACCTCTCACTCCCGAAAGAGCCATCCCACTGCCCGTCTCGCTCTACTCCAGACCAGG ********************** ************************************* HS_haplotype1 ACCAATATAGATATCTAGGCAAAAAACCCAAGACTCGGAGCGCGGGAGGTGAGGTCAGTA HS_assemblymutate ACCAATATAGATATCTAGGCGAAAAACCCGAGACTCGGAGCGCGGGAGGTGAGGTCAGTA HS_haplotype2 ACCAATATAGATATCTAGGCGAAAAACCCGAGACTCGGAGCGCGGGAGGTGAGGTCAGTA ******************** ******** ****************************** HS_haplotype1 CGCCACTGGCTACGCCAGCTCACGGGTGGTCTTAGTATGTTGTCATTTAAAACTTGAATT HS_assemblymutate CGCCACTGGCTACGCCAGCTCACGGGTGGTCTTAGTATGTTGTCATTTAAAACTTGAATT HS_haplotype2 CGCCACTGGCTGCGCCAGCTCACGGGTGGTCTTAGTATGTTCTCATTTAAAACTTGAATT *********** ***************************** ****************** HS_haplotype1 AAAGAAGGGCTGCGACAGACGGAGTGTCTAAAAAATCCTTTGTGTGTTTTTGTATGTGCA HS_assemblymutate AAAGAAGGGCTGCGACAGACGGAGTGTCTAAAAAATCCTTTGTGTGTTTTTGTATGTGCA HS_haplotype2 AAAGAAGGGCTGGGACAGATGGAGTGTCTAAAAAATCCTTTGTGTGTTTTTGTATGTGCA ************ ****** **************************************** HS_haplotype1 CCTGTACCCCAGTGTAGATGCTGTTAACTCTGTTTCTTGAGAGAAATCCAGTATGTGTAT HS_assemblymutate CCTGTACCCCAGTGTAGATGCTGTTAACTCTGTTTCTTGAGAGAAATCCAGTATGTGTAT HS_haplotype2 CCTGTACCCCAGTGTAGATGCTGTTAACTCTGTTTCTTGAGAGAAATCCAGTATGTGTAT ************************************************************ HS_haplotype1 ATTCTTTCCAGGGAATCCTTTTTGTACAAAAGGAGGTATTTGTGAAGGCTCTATCTCAGG HS_assemblymutate ATTCTTTCCAGGGAATCCTTTTTGTACAAAAGGAGGTATTTGTGAAGGCTCTATCTCAGG HS_haplotype2 AATCTTTCCAGGGAATCCTTTTTGTACAAAAGGAGGTATTTGTGAAGGCTCTATCTCAGG * ********************************************************** HS_haplotype1 ACACAGAGCTAACTTTGTAATTAGCGATCACTTAAAAATGAGGCAGACTTCATGCTAGCA HS_assemblymutate ACACAGAGCTAACTTTGTAATTAGCGATCACCTAAAAATGAGGCAGACTTCATGCTAGCA HS_haplotype2 ACACAGAGCTAACTTTGTAATTAGCGATCACCTAAAAATGAGGCAGACTTCATGCTAGCA ******************************* **************************** HS_haplotype1 GGTAATAATACATTTTTGAACATGTTAAATTCAAGATTTCAGGTCAGTCGCCCATCATTT HS_assemblymutate GGTAATAATACATTTTTGAACATGTTAAATTCTAGATTCCAGGTCAGTCGCCCATCATTT HS_haplotype2 GGTAATAATACATTTTTGAACATGTTAAATTCTAGATTCCAGGTCAGTCGCCCATCATTT ******************************** ***** ********************* HS_haplotype1 CTCGGCCTAACCTGAAGGAATGAGACTTGGGAAAATTCATGTGTGCTGTGGGAGTCCTTG HS_assemblymutate CTCGGCCTAACCTGAAGGAATGAGACTTGGGAAAATTCATGTGTGCTGTGGGAGTCCTTG HS_haplotype2 CTCGGCCTAACCTGAAGGAATGAGACTTGGGAAAATTCATGTGTGCTGTGGGAGTCCTTG ************************************************************ HS_haplotype1 GGTCGACCCGCCCTCAGTTTGAGTTGTTTGTTTATCTATTAAAAACCGATGATGGGCTTA HS_assemblymutate GGTAGACCCGCCCTCAGTTTGAGTTGTGTGTTTATCTATTAAAAACCGATGATGGGCTTG HS_haplotype2 GGTAGACCCGCCCTCAGTTTGAGTTGTGTGTTTATCTATTAAAAACCGATGATGGGCTTG *** *********************** ******************************* HS_haplotype1 GCCAGAGCTCATTCATTTCTTTAAAGAAAAAATCTCTTCAGGAGAAGAAACCAATGTGAC HS_assemblymutate GACAGAGCTCATTCATTTCTTTAAAGAAAAAATCTCTTCAGGAGAAGAAACCAATGTGAC HS_haplotype2 GACAGAGCTCATTCATTTCTTTAAAGAAAAAATCTCTTCAGGAGATGAAACCAATGTGAC * ******************************************* ************** HS_haplotype1 CAGAGCCAGAAAACCCCTCCTTTCCTAAGGTCATTGCATTTTCCAAGTGCTTAAGAAGGT HS_assemblymutate CAGAGCCAGAAAACCCCTCCTTTCCTAAGGTCATTGCATTTTCCAAGTGCTTAAGAAGGT HS_haplotype2 CAGAGCCAGAAAACCCCTCCTTTCCTAAGGTCATTGCATTTTCCAAGTGCTTAAGAAGGT ************************************************************ HS_haplotype1 ATGTGTATGGAAGACCTCTTTTGTTTTGTAATCTTGGTTAAGAAAACTTGGTTTCTAAGC HS_assemblymutate ATGTGTATGGAAGATCTCTTTTGTTTTGTAATCTTGGTTAAGAAAACTTGGTTTCTAAGC HS_haplotype2 ATGTGTATGGAAGATCTCTTTTGTTTTGTAATCTTGGTTAAGAAAACTTGGTTTCTAAGC ************** ********************************************* HS_haplotype1 CTGGGTTCCCCCCAGGCGGAGCTTTCCCTTAACACTACAATATCTGTGGAAGAAAAATGT HS_assemblymutate CTGGGTTCCCCCCAGGCGGAGCTTTCCCTTAACACTACATTATCTGTGGAAGAAAAATGT HS_haplotype2 CTGGGTTCCCCCCAGGCGGAGCTTTCCCTTAACACTACATTATCTGTGGAAGAAAAATGT *************************************** ******************** HS_haplotype1 GGAGGCGCGCTGCGGCCTTGAAAATTGCATCATCTCAAAATGTGTGCTTGAAAGGTGCGA HS_assemblymutate GGAGGCGCGCTGCGGCCTTGAAAATTGCATCATCTCAAAATGTGTGCTTGAAAGGTGCGA HS_haplotype2 GGAGGCGCGCTGCGGCCTTGAAAATTGCATCATCTCAAAATGTGTGCTTGAAAGGTGTGA ********************************************************* ** HS_haplotype1 GTGATTACTCTGGTGCCTTGTTCCGAAGGGTACATGGGGAGTGGTTTCTGCGGGAGGGCC HS_assemblymutate GTGATTACTCTGGTGCCTTGTTCCGAAGGGTACATGGGGAGTGGTTTCTGCGGGAGGGCC HS_haplotype2 GTGATTACTCTGGTGCCTTGTTCCGAAGGGTACATGGGGAGTGGTTTCTGCGGGAGGGCC ************************************************************ HS_haplotype1 GCGCGCCTGTATTGTTAGTATAGGGTAGACTGCTGAACAAATAATGTGGATGTGAAGTAT HS_assemblymutate GCGCGCCTGTATTGTTAGTATAGGGTAGACTGCTGAACAAATAATGTGGATGTGAAGTAT HS_haplotype2 GCGCGCCTGTATTGTTAGTATAGGGTAGACTGCTGAACAAATAATGTGGATGTGAAGTAT ************************************************************ HS_haplotype1 GTTATGACCCCACTTAATTAGTTTTTAAGACATGGTGGATTATATGCCTGTTAATATATT HS_assemblymutate GTTATGACCCCACTTAATTAGTTTTTAAGACATGGTAGATTATATGCCTGTTAATATATT HS_haplotype2 GTTATGACCCCACTTAATTAGTTTTTAAGACATGGTAGATTATATGCCTGTTAATATATT ************************************ *********************** HS_haplotype1 AGCCTTGACATTCAAGATTAGCACGCCTACCCAAAGCAAGAATGCCAGATTTGTCTAATG HS_assemblymutate AGCCTTGACATTCAAGATTAGCATGCCTACCCAAAGCAAGAATGCCAGATTTGTCTAATG HS_haplotype2 AGCCTTGACATTCAAGATTAGCATGCCTACCCAAAGCAAGAATGCCAGATTTGTCTAATG *********************** ************************************ HS_haplotype1 TGAGGTGGAGCAACCCCTTGAGACGGGAACAAATGTACAGGTCAATCTGTATTATTCGAG HS_assemblymutate TGAGGTGGAGCAACCCCTTGAGACGGGAACAAATGTACAGGTCAATCTGCATTATTCGAG HS_haplotype2 TGAGGTGGAGCAACCCCTTGAGACGGGAACAAATGTACAGGTCAATCTGCATTATTCGAG ************************************************* ********** HS_haplotype1 GAAGCTTGGGCAAGGGCCTCTGGTCTGAGGTTGGATGTATAAATGATGGTGAAGTTCTCA HS_assemblymutate GAAGCTGGGGCAAGGGCCTCTGGTCTGAGGTTGGATGTATAAATGATGGTGAAGTTCTCA HS_haplotype2 GAAGCTGGGGCAAGGGCCTCTGGTCTGAGGTTGGATGTATAAATGATGGTGAAGTTCTCA ****** ***************************************************** HS_haplotype1 TATATTTAAAAATCTCTGGAGACTGGTGCGCTCTGAAATTATTTGTTCAGTGAAAAGAAA HS_assemblymutate TATATTTAAAAATCTCTGGAGACTGGTGCGCTCTGAAATTATTTTTTCAGTGAAAAGAGA HS_haplotype2 TATATTTAAAAATCTCTGGAGACTGGTGCGCTCTGAAATTATTTTTTCAGTGAAAAGAGA ******************************************** ************* * HS_haplotype1 CAAAAGAACTCCACCAACCTGATTGAGTGGAGAATCACTGTGGAAAAAATTGATTTAAAG HS_assemblymutate CAAAAGAACTCCACCAACCTGATTGAGTGGAGAATCACTGTGCAAAAAATTGATTTAAAG HS_haplotype2 CAAAAGAACTCCACCAACCTGATTGAGTGGAGAATCACTGTGCAAAAAATTGATTTAAAG ****************************************** ***************** HS_haplotype1 TGCTGTATTAGAAAAAAATGTGATTCTAGAATGGCTATTTTTTAATATCGCATGGAACTT HS_assemblymutate TGCTGTATTAGAAAAAAATGTGATTCTAGAATGGCTATTTTTTAATATCGCATGGAACTT HS_haplotype2 TGCTGTATTAGAAAAAAATGTGATTCTAGAATGGCTATTTTTTAATATCACATGGAACTT ************************************************* ********** HS_haplotype1 CCCAGGCGGATTAGGCAGCTTGATTAACTGCAATGGGACATATGGAATAAATAGAAATTA HS_assemblymutate CCCAGGCGGATTAGGCAGCTTGATTAACTGCAATGGGACATATGGAATAAATAGAAATTA HS_haplotype2 CCCAGGCGGATTAGCCAGCTTGATTAACTGCAATGGGACATATGGAATAAATAGAAATTA ************** ********************************************* HS_haplotype1 AAATCTAGCTGGGCAGAGAACCCAGTCTGTGTGACAGCTTGAAGAAACTGACCTTAGTTA HS_assemblymutate AAATCTAGCTGGGCAGAGAACCCAGTCTGTGTGACAGCTTGAAGAAACTGACCTTAGTTA HS_haplotype2 AAATCTAGCTGGGCAGAGAACCCAGTCTGTGTGACAGCTTGAAGAAACTGACCTTAGTTA ************************************************************ HS_haplotype1 ACTCCGCGGGTGGTGGCAACATTGCATTGCTTTGGATATTTCACCAAATTTGTTCTAGAG HS_assemblymutate ACTCCGCGGGTGGTGGCAACATTGCATTGCTTTGGATATTTCACCAAATTTGTTCTAGAG HS_haplotype2 ACTCCGCGGGTGGTGGCAACATTGCATTGCTTTGGATATTTCACCAAATTTGTTCTAGAG ************************************************************ HS_haplotype1 ACAAAGGAATCTTCTAGCCGCCACATACATTTGGCACCACAAGTATTTTTGGGGGGATAC HS_assemblymutate ACAAAGGAATCTTCTAGCCGCCACATACATTTGGCACCACAAGTATTTTTGGGGGGAAAC HS_haplotype2 ACAAAGGAATCTTCTAGCCGCCACATACATTTGGCACCACAAGTATTTTTGGGGGGAAAC ********************************************************* ** HS_haplotype1 CCCACATGTTATTAGTGAAACAGGCGGGTTTCATAAGCTGAGAATTCATTATAGGAAAGA HS_assemblymutate CCCACATGTTATTAGTGAAACAGGTGGGTTTCATACGCTGAGAATTCATTATAGGAAAGA HS_haplotype2 CCCACATGTTATTAGTGAAACAGGTGGGTTTCATACGCTGAGAATTCATTATAGGAAAGA ************************ ********** ************************ HS_haplotype1 TAGTCACTTTGACAGCGGGAGGTTCAAAAACGAAACATATACACATATTTAATTATTTTC HS_assemblymutate TAGTCACTTTGACAGCAGGAGGTTCAAAAACGAAACATATACACATATTTAATTATTTTC HS_haplotype2 TAGTCACTTTGACAGCAGGAGGTTCAAAAACGAAACATATACACATATTTAATTATTTTC **************** ******************************************* HS_haplotype1 CCTCCAGGCTGATTAGCAAATGCCTGGGATTACTTAACTTGTACTCAATGGTTATGGAGG HS_assemblymutate CCTCCAGGCTGATTAGCAAATGCCTGGGATTACTTAACTTGTCCTCAATGGTTATGGAGG HS_haplotype2 CCTCCAGGCTGATTAGCGAATGCCTGGGATTACTTAACTTGTCCTCAATGGTTATGGAGG ***************** ************************ ***************** HS_haplotype1 CTGTGTGAGTAGCGCCCAAAACTCGACAGAGAATTATAGATCCTATTGCTGGGACTGATA HS_assemblymutate CTGTGTGAGTAGCGGGCAAAACTCGACAGAGAATTATAGATCCTATTGCTGGGACTGATA HS_haplotype2 CTGTGTGAGTAGCGGGCAAAACTCGACAGAGAATTATAGATCCTATTGCTGGGACTGATA ************** ******************************************** HS_haplotype1 ATTCTCCTCCTGGGATTTAAAAGCTAGCCTGGGAATTGCAGGAGATTTATATTGTGATCT HS_assemblymutate ATTCTCCTCCTGGGATTTAAAAGCTAGCCTGGGAATTGCAGGAGATTTATATTGTGATCT HS_haplotype2 ATTCTCCTCCTGGGATTTAAAAGCTAGCCTGGGAATTGCAGGAGATTTATATTGTGATCT ************************************************************ HS_haplotype1 GCCTGAATCCCCAAGAGCACAGATATGACCCTTAAGACTCCATCGCTTCTATTCGCACAT HS_assemblymutate GCCTGAATCCCCAAGAGCACAGATATGACCCTTAAGACTCCATCGCTTCTATTCGCACAT HS_haplotype2 GCCTGAATCCCCAAGAGCACAGATATGACCCTTAAGACTCCATCGCTTCTATTCCCACAT ****************************************************** ***** HS_haplotype1 AATTTTTGGTGCGTCCCTCGGGCTCTTATGGCTAACCCCTGTATGCCAGTTTTTTTGTGA HS_assemblymutate AATTTTTGGTGCGTCCCTCGGGCTCTTATGGCTAACCCCTGTATGCCAGTTTTTTTGTGA HS_haplotype2 AATTTTTGGTGCGTCCCTCGGGCTCTTATGGCTAACCCCTGTATGCCAGTTTTTTTGTGA ************************************************************ HS_haplotype1 GCCCCGAACTGTGTACCCAGTTCTCCCGCCCGCGCCCCAAAATAAATATATATATAGATG HS_assemblymutate GCCCCGAACTGTGTACCCAGTTCTCCCGCCCGCGCCCCAAAATAAATATATATATAGATG HS_haplotype2 ACCCCGAACTGTGTACGCAGTTCTCCCGCCCGCGCCCCAAAATAAATATATATATAGATG *************** ******************************************* HS_haplotype1 CTACAATCTCAAGCGAGGCTGGGATGGTTCCAAACATTCATGATTAATAAGTTATTTATT HS_assemblymutate CTACAATCTCAAGCGAAGCTGGGATGGTTCCAAACATTCATGATTAATAAGTTATTTATT HS_haplotype2 CTACAATCTCAAGCGAAGCTGGGATGGTTCCAAACATTCATGATTAATAAGTTATTTATT **************** ******************************************* HS_haplotype1 TCTCAGAAAATCTAAGCTTCTTTGGAGCCATTCAGCCTTGTGAATAAATGGCACGCCTCG HS_assemblymutate TCTCAGAAAATCTAAGCTTCTTTGGAGCCAATCGGCCTTGTGAATAAATGGCACGCCTCG HS_haplotype2 TCTCAGAAAATCTAAGCTTCTTTGGAGCCAATCGGCCTTGTGAATAAATGGCACGCCTCG ****************************** ** ************************** HS_haplotype1 CCACTCCATAATTTTTTCATCCCTATTTAAAATGTAACTCCTGAGTCACACTTTGGGGAA HS_assemblymutate GCACTCCATAATATTTTCATCCCTATTTAAAATGTAACTCCTGAGTCACACTTTGGGGAA HS_haplotype2 GCACTCCATAATATTTTCATCCCTATTTAAAATGTAACTCCTGAGTCACACTTTGGGGAA *********** *********************************************** HS_haplotype1 ACTCTGCAGGAGTGGAGGGACCACAGGCGTGAGGGAGGATAGACCAGTAGAGTGAAGGCA HS_assemblymutate ACTCTGCAGGAGTGGAGGGACCACAGGCGTGAGGGAGGATAGACCAGTAGAGTGAAGGCA HS_haplotype2 ACTCTGCAGGAGTGGAGGGACCACAGGCGTGAGGGAGGATAGACCAGTAGAGTGAAGGCA ************************************************************ HS_haplotype1 GGGTGCAGCTAGCAGCCTCGATATTTATGAATCAGTTGGGTAGAACCCAAATGTTGAAGG HS_assemblymutate GGGTGCAGCTAGCAGCCTCGATATTTATGAATCAGTTGGGTAGAACCCAAATGTTGAAGG HS_haplotype2 GGCTGCAGCTAGCAGCCTCGATATTTATGAATCAGTTGGGTAGAACCCAAATGTTGAAAG ** ******************************************************* * HS_haplotype1 TGGTGGTTTGGTGCGTGGGGGGGGACAGAATACTGACCCATCATGCCCACTGTTCTAGTT HS_assemblymutate TGGTGGTTTGGTGCGTGGGGGGGGACAGAATACTGACCCATCATGCCCACTGTTCTAGTT HS_haplotype2 TGGTGGTTTGGTGCGTGGGAGGGGACAGAATACTGACCCATCATGCCCACTGTTCTAGTT ******************* **************************************** HS_haplotype1 TCAACAGACCAACAGTATCAGAGTCCCAGGCCAGCTGGCCACCATTCGCCCCTTAGGAGG HS_assemblymutate TCAACAGACCAAAAGTAGCAGAGTCCCAGGCCAGCTGGCCACCATCCGCCCCTTAGGAGG HS_haplotype2 TCAACAGACCAAAAGTAGCAGAGTCCCAGGCCAGCTGGCCACCATCCGCCCCTTAGGAGG ************ **** *************************** ************** HS_haplotype1 CAGAGGCAGTGAAGTCACATGATTCTGTCTTATTTCTGTTCTGGGAACTGACCTTTCCCA HS_assemblymutate CAGAGGCAGCGAAGTCACATGATTCTGTCTTATTTCTGTTCTGGGAACTGACCTTTCCCA HS_haplotype2 CAGAGGCAGCGAAGTCACATGGTTCTGTCTTAATTCTGTTCTGGGAACTGACCTTTCCCA ********* *********** ********** *************************** HS_haplotype1 GGCAAACATTGACATGTATATAAATGGGTTTTGAATTTTAATTTTCCTTTTGCCATGAGA HS_assemblymutate GGCAAACATTGACATGTATATAAATGGGTTTTGAATTTTAATTTTCCTTTTGCCATGAGA HS_haplotype2 GGCAAACATTGACATGTATATAAATGGGTTTTGAATTTTAATTTTCCTTTTGCCATGAGA ************************************************************ HS_haplotype1 GAGAGGCTCAAAGATGCCCCGCCCAGCTCTAAGTAGCAACTCCTGCTACCCCCAGGCTGG HS_assemblymutate GAGAGGCTCAAAGACGCCCCGCCCAGCTCTAAGTAGCAACTCCTGCTACCCCCAGGCTGG HS_haplotype2 GAGAGGCTCAAAGACGCCCCGCCCAGCTCTAAGTAGCAACTCCTGCTACCCCCAGGCTGG ************** ********************************************* HS_haplotype1 GCTCAAATCAATTTTATTTAGGGAAAGAACTAAATTCTTCCCCTCATTGATCAGACAATA HS_assemblymutate GCTCAAATCAATTTTATTTAGGGAAAGAACTAAATTCTTCCCCTCATTGATCACACAATA HS_haplotype2 GCTCAAATCAATTTTATTTAGGGAAAGAACTAAATTCTTCCCCTCATTGATCACACAATA ***************************************************** ****** HS_haplotype1 TTAACACAATGCTGGTTCATTCAAATGGCAGGAGGGAAGGACAAAGTATGTTCCCTGGCA HS_assemblymutate TTAACACAATACTGGTTCATTCAAATGGCAGGAGGGAAGGACAAAGTATGTTCCCTGGCA HS_haplotype2 TTAACACAATACTGGTTCATTCAAATGGCAGGAGGGAAGGACAAAGTATGTTCCCTGGCA ********** ************************************************* HS_haplotype1 TGCAAAATA--------CAAAATCAAGCAACATAGTAAATTAGCCAAGCACATCCATTTT HS_assemblymutate TGCAAAATACTATGTTGCAAAATCAAGCAATATAGTAAATTAGCCAGGCAGATCCATTTT HS_haplotype2 TGCAAAATA--------CAAAATCAAGCAATATAGTAAATTAGCCAGGCAGATCCATTTT ********* ************* *************** *** ********* HS_haplotype1 ATTGGTTTGTAGCTATGTATCCTCACATGAGTCTGGCTCGCAGTGAGCATTCATTAAAAC HS_assemblymutate ATTGGTTTGTAGCTATGGATCCTCACATGAGTCTGGCTCGCAGTGAGCATTCATTAAAAC HS_haplotype2 ATTGGTTTGTAGCTATGGATCCTCACATGAGTCTGGCTCGCAGTGAGCATTCATTAAAAC ***************** ****************************************** HS_haplotype1 CTGGTGGCGTGCTGTCAGAACTGGCCCTGCCTTAGCACAGCTGTGAATAATAACACTCAC HS_assemblymutate CTGGTGGCGTGCTGTCAGAACTGGCCCTGCCTTAGCACAGCTGTGAATAATAACACTCAC HS_haplotype2 CTGGTGGCATGCTGTCAGAACTGGCCCTGCCTTAGAAAAGCTGTGAATAATAACACTCAC ******** ************************** * ********************** HS_haplotype1 TCATTTTAAAAGTGAGCTCCCGACTTTTTACATACTTCACTAGCCTACAGTGCTGAGGTG HS_assemblymutate TCATTTTAAAAGTGAGCTCCCGACTTTTTACATACTTCACTAGCCTACAGTGCTGAGGTG HS_haplotype2 TCATTTTAAAAGTGAGCTCCCGACTTTTTACATACTTCTCTAGCCTACAGTGCTGAGGTG ************************************** ********************* HS_haplotype1 TAGTCTTACTTTGTTTGATTGTAGTCGGAGCATTACAACACAGACGAAGGGGGCTCCACT HS_assemblymutate TAGTCTTACTTTGTTTGATTGTAGTCGGAGCATTACAACACAGACTAAGGGGGCTCCACT HS_haplotype2 TAGTCATACTTTGTATGATTGTAGTCGGAGCATTACAACACAGACTAAGGGGGCTCCACT ***** ******** ****************************** ************** HS_haplotype1 GCCATACTGGCTCTAAGTAGCTGCTATGTACACAGCCACACCCCCAACGTATTTAATTTT HS_assemblymutate GCCATACTGGCTCTAAGTAGCTGCTATGTACACAGCCACACCCCCAACGTATTTAATTTT HS_haplotype2 GCCATACTGGCTCTAAGTAGCTGCTATGTACACAGCCACACCCCCAACGTATTTAATTTT ************************************************************ HS_haplotype1 TCATGGAGCTTTCTGTATTTGTTTTATGTATTGGAAGAAAAGGGCGGCCTAAGCGGCTCG HS_assemblymutate TCATGGAGCTTTCTGTATTTGTTTTATGTATTGGAAGAAAAGGGCGGCCTAAGCGGCTCG HS_haplotype2 TCATGGAGCTTTCTGTATTTGTTTTATGTATTGGAAGAAAAGGGCGGCCTAAGCGGCTCG ************************************************************ HS_haplotype1 AGAGTACTTGCCACTCTGAGGTCACACTGAGGCTTGTCCCTGGCCACTGAAACTGTAGTT HS_assemblymutate AGAGTACTTGCCACTCTGAGGTCACACTGAGGCTTGTCCCTGGCCACTGAAACTGTAGTT HS_haplotype2 AGAGTACTTGGCACTCTGAGGTCACACTGAGGCTTGTCCCTGGCCACTGAAACTGTAGTT ********** ************************************************* HS_haplotype1 TTTTGCTTTACCCGGTTTCATTTACAAAGTACTTTCTTTATTGTAGAGAGGGTATATATA HS_assemblymutate TTTTGCTTTACCCGGTTTCATTTACAAAGTACTTTCTTTATTGTAGAGAGGGTATATATA HS_haplotype2 TTTTGCTTTACCCGGTTTCATTTACAAAGTACTTTCTTTATTGTAGAGAGGGTATATATA ************************************************************ HS_haplotype1 GAAAAACTTGTTTTTTATGTCCACCTTGCCATAGAAACCTATATACCATGGGACTCAATA HS_assemblymutate GAAAAACTTGTTTTTTATGTCCACCATGCCATAGAAACCTATATACCATGGGACTCAATA HS_haplotype2 GAAAAACTTGTTTTTTATGTCCACCATGCCATAGAAACCTATATACCATGGGACTCAATA ************************* ********************************** HS_haplotype1 TAAAAAGTGATTATAGTCCAGAGGGAATTATTGATACGGATGGGGTGACGGATGCATATC HS_assemblymutate TAAAAAGTGATTATAGTCCAGAGGGAATTATTGATACGGATGGGGTGACGGATGCATATC HS_haplotype2 TAAAAAGTGATTATAGTCCAGAGGGAATTATTGATACGGATGGGGTGACGGATGCATATC ************************************************************ HS_haplotype1 CACCACGTCCCCGTATGTTTAATTTTGACATAGCACTGAGCGGTAATTTCACAGGGTGCT HS_assemblymutate CACCACGTCCCCGTATGTTTAATTTTGACAGAGCACTGAGCGGTATTTTCACAGGGTGCT HS_haplotype2 CACCACGTCCCCGTATGTTTAATTTTGACAGAGGACTGAGCGGTATTTTCACAGGGTGCT ****************************** ** *********** ************** HS_haplotype1 GGGGGATGCCATCTGTAAAGAACAGATGAGCAAACACACATCTGACAGGTAAGTGGCTCA HS_assemblymutate GGGGGATGCCATCTGTAAATAACAGATGAGCAAACACACATCTGACAGGTACGTGGCTCA HS_haplotype2 GGGGGATGCCATCTGTAAATAACAGATGAGCAAACACACATCTGACAGGTACGTGGCTCA ******************* ******************************* ******** HS_haplotype1 AGCAGAGGTTTCACTGCGACAGACTGCGCTCACTTGTTACAGGCTCAAAAATAAGAAGTC HS_assemblymutate AGCAGAGGTTTCACTGCGACAGACTGCGCTCACTTGTTACAGGCTCAAAAATAAGAAGTC HS_haplotype2 AGCAGAGGTTTCACTGCGACAGACTGCGCTCACTTGTTACAGGCTCAAAAATAAGAAGTC ************************************************************ HS_haplotype1 TCTCTCTGCTGATTTGATCTAAATGCTCTCTAGTCTAATAATAAATCCCACGATATCTGG HS_assemblymutate TCTCTATGCTGATTTGATCTAAATGCTCTCTAGTCTAATAATAAATCCCACGATATCTGG HS_haplotype2 TCTCTATGCTGATTTGATCTAAATGCTCTCTAGCCTAATAATAAATCCCACGATATCTGG ***** *************************** ************************** HS_haplotype1 GTAATCTCCCCATGTGTTACTAATGTGCTCGGCCCCCAGGAGCGGAGCAAAAGGTTGAAA HS_assemblymutate GTAATCTCCCCATGTGTTACTAATGTGCTCGGCCCCCAGGAGCGAAGCAAAAGGTTGAAA HS_haplotype2 GTAATCTCCCCATGTGTTACAAATGTGCTCGGCCCCCAGGAGCGAAGCAAAAGGTTGAAA ******************** *********************** *************** HS_haplotype1 CTGCTCACCGTGCATGGGCTTATATACCAAGCTGAATGTGGGACTTCTCACCACCATCCC HS_assemblymutate CTGCTCACCGTGCATGGGCTTATATACCAAGCTGAATGTGGGACTTCTCACCACCATACC HS_haplotype2 CTGCTCACCGTGCATGGGCTTATATACCAAGCTGAATGTGGGACTTCTCACCACCATACC ********************************************************* ** HS_haplotype1 ATCTTGGCCAAAGCAGAGGCACTGAACTTTTTCATCTTCTATCAAGCACTTTGGCTCCTA HS_assemblymutate ATCTTGGCCAAAGCAGAGGCACTGAACTTTTTCATCTACTATCAAGCACTTTGGCTCCTA HS_haplotype2 ATCTTGGCCAAAGCAGAGGCACTGAACTTTTTCATCTACTATCAAGCACTTTGGCTCCTA ************************************* ********************** HS_haplotype1 AATGTTTCCACCAAGTTGGACTAAGTAGAGATTTTTCTACCCACAGCTACCTCATGCTGT HS_assemblymutate AATGTTTCCACCAAGTTGGACTAAGTAGAGATTTTTCTACCCACAGCTACCTCATGCTGT HS_haplotype2 AATGTTTCCACCAAGTTGGACTAAGTAGAGATTTTTCTACCCACAGCTACCTCATGCTGT ************************************************************ HS_haplotype1 CAGTATATATGGGGTGAAACCGAAGGAAGAATCGGGAGCTCTTGGACCATCCGCCTCATC HS_assemblymutate CAGTATATATGGGGTGAAACCGAAGGAAGAATCGGGAGCTCTTGGGCCATCCGCCTCATC HS_haplotype2 CAGTATATATGGGGTGAAACCGAAGGAAGAATCGGGAGCTCTTGGGCCATCCGCCTCATC ********************************************* ************** HS_haplotype1 TGATCCAGCCTCTCAGGGACTGGCAGTGGCTCAGTGTTAAAAGAGCAGGTGGCTATATTT HS_assemblymutate TGATCCAGCCTCTCAGGGACTGGCAGTGGCTCAGTGTTAAAAGAGCAGGTGGCTATATTT HS_haplotype2 TGATCCAGCCTCTCAGGGACTGGCAGTGGCTCAGTGTTAAAAGAGCAGGTGGCTATATTT ************************************************************ HS_haplotype1 ATTCTGAGTGATGGTACTGATGAGCTGAAATAGCTGGTCCCTTGGATGCACTTGGCTTCC HS_assemblymutate ATTCTGAGTGATGGTACTGATGAGCTGAAATAGCTGGTCCCTTAGATGCACTTGGCTTCC HS_haplotype2 ATTCTGAGTGATGGTACTGATGAGCTGAAATAGCTGGTCCCTTAGATGCACTTGGCTTCC ******************************************* **************** HS_haplotype1 TTCGTCCCAAGTTTCACACAGCTCTTGTGTGCATTCCAAAGTTTTTACTTACAAAGCGTT HS_assemblymutate TTCGTCCCAAGTTTCACACAGCTCTTGTGTGCATTCCAAAGTTTTTACTTACAAAGCGTT HS_haplotype2 TTCGTCCCAAGTTTCACACAGCTCTCGTGTGCATTCCAAAGTTTTTACTTACAAAGCGTT ************************* ********************************** HS_haplotype1 TTGGCAGGAGTCCCCAAGTTTATAATACCAGAGTGGGCGAAATTTGGTGTGGCCCCCATG HS_assemblymutate TTGGCAGGAGTCCCCAAGTTTATAATACCAGAGTGGGCGAAATTTGGTGTGGCCCCCATG HS_haplotype2 TTGGCAGGAGTCCCCAAGTTTATAATACCAGTGTGGGCGAAATTTGGTGTGGCCCCCATG ******************************* **************************** HS_haplotype1 TGGTGGAGAGCTTTTAAACAGTGGCGACCCCTTGAAGTCCTTCAGCTCCTGATGAGGTTT HS_assemblymutate TGGTGGAGAGCTTTTAAACAGTGGCGACCCCTTGAAGTCCTTCAGCTCCTGGTGAGGTTT HS_haplotype2 TGGTGGAGAGCTTTTAAACAGTGGCGACCCCTTGAAGTCCTTCAGCTCCTGGTGAGGTTT *************************************************** ******** HS_haplotype1 GACCAAACACTAGCTAACTAAATTAATGTAGAAAGCCTTAGTCAATATATAAAAATAGTA HS_assemblymutate GACCAAACACTAGCAAACTATATTAATGTAGAAAGCCTTAGTCAATATATAAAAATAGTA HS_haplotype2 GACCAAACACTAGCAAACTATATTAATGTAGAAAGCCTTAGTCAATATATAAAAATAGTA ************** ***** *************************************** HS_haplotype1 ATCCATTTCCTTTGTATAAAATAAACTATGAGATGTCGGTACAGGCTGGAAGCACAGGGG HS_assemblymutate ATCCATTTCCTTTGTATACAATAAACTATGAGATGTCGGTACAGGCTGGAAGCACAGGGG HS_haplotype2 ATCCATTTCCTTTGTATACAATAAACTATGAGATGTCGGTACAGGCTGGAAGCACAGGGG ****************** ***************************************** HS_haplotype1 CCCTGCCGCCACCCAGTTCTGTCCTGGCGAGAGATTCTTTGTATATTAAGACTTCAGTAT HS_assemblymutate CCCTGCCGCCACCCAGTTCTGTCCTGGCGAGAGATTCTTTGTATATTAAGACTTCAGTAT HS_haplotype2 CCCTGCCGCCACCCAGTTCTGTCCTGGCGAGAGATTCTTTGTATATTAAGACTTCAGTAT ************************************************************ HS_haplotype1 GTGAAGTGATGTTGTTAATATGTCCAGTGACCATGCAATGGAAACGAGCAAGGACCCAGG HS_assemblymutate GTGAAGTGATGTTGTTAATATGTCCAGTGACCATGCAATGGAAACGAGCAAGGACCCAGG HS_haplotype2 GTGAAGTGATGTTGTTAATATGTCCAGTGACCATGCAATGGAAACGAGCAAGGACCCAGG ************************************************************ HS_haplotype1 CGACACATAGACTCCAGAGGTTCCGGCCGCGTTTTGAGGGGTAAATAGGGTGATCCAGAG HS_assemblymutate CGACACATAGACTCCAGAGGTTCCGGCCGCGTTTTGAGGGGTAAATAGGGTGATCCAGAG HS_haplotype2 CGACACATAGACTCCAGAGGTTCCGGCCGCGTTTTGAGGGGTAAATAGCGTGATCCAGAG ************************************************ *********** HS_haplotype1 AAGGCCAGTTTCGTTGTAAGTGAGCTTATTTATTTGAATTTTCCCTGGTACAGTATTGGT HS_assemblymutate AAGGCCAGTTTCGTTGTAAGTGAGCTTATTTATTTGAATTTTCCCTGGTACAGTATTGGT HS_haplotype2 AAGGCCAGTTTCGTTGTAAGTGAGCTTATTTATTTGAATTTTCCCTAGTACAGTATTGGT ********************************************** ************* HS_haplotype1 GAGCCTGACCCTCCGCCTGGGTTCCCCAGACCCTGTCTCTGAGACCAGGTTCTATCAAAA HS_assemblymutate GAGCCTGACCCTCCGCCTGGGTTCCCCAGACCCTGTCTCTGAGACCAGGTTCTATCAAAA HS_haplotype2 GAGCCTGACCCTCCGCCTGGGTTCCCCAGACCCTGTCTCAGAGACCAGGTTCTACCAAAA *************************************** ************** ***** HS_haplotype1 TCCAGCCTGGCAATGAAGAGGGGGCAAGTTGCCGAGTAAATTTCCAACTGTGTGGTAGCT HS_assemblymutate TCCAGCCTGGCAATGAAGAGGGGGCAAGTTGCCGAGTAAATTTCCAACTGTGTGGTAGCT HS_haplotype2 TCCAGCCTGGCAATGAAGAGGGGGCAAGTTGCCGAGTACATTTCCAACTGTGTGGTAGCT ************************************** ********************* HS_haplotype1 GGAGGTGACAGCTCGTTCCCTGAGTTCCTTTCCCCTA--ATCTTCGCCTCAAAACGTGGG HS_assemblymutate GGAGGTGACAGCTCGTTCCCTGAGTTCCTTTCCCCTACGATCTTGGCCTCAAAACGTGGG HS_haplotype2 GGAGGTGACAGCTCGTTCCCTGAGTTCCTTTCCCCTA--ATCTTGGCCTCAAAACGTGGG ************************************* ***** *************** HS_haplotype1 AGGGTAATATCAACATAGGCAAGAGCTCACTGGCCTCAGGCTGGGTATACTATGTGAGGC HS_assemblymutate AGGGTAACATCAACATAGGCAAGAGCTCACTGGCCTCAGGCTGGGTATACTATGTGAGGC HS_haplotype2 AGGGTAACATCAACATAGGCAAGAGCTCACTGGCCTCAGGCTGGGTAAACTATGTGAGGC ******* *************************************** ************ HS_haplotype1 TCGCGCCCGCTCCCTTCTGTTTCCAGGTAGTCTCGGAGACTCTGTACGTTACTGCACGCC HS_assemblymutate TTGCGCCCGCTCCCTTCTGTTTCCAGGTAGTCTCGGAGACTCTGTACGTTACTGCACGCC HS_haplotype2 TTGCGCCCGCTCCCTTCTGTTTCCAGGTAGTCTCGGAGACTCTGTACGTTACTGCACGCC * ********************************************************** HS_haplotype1 TGTGCCCCTCTGGAAGAATGAGCATTTAGAGAGCTCCTGGAGGTTTACAGCTAATAGAGA HS_assemblymutate TGTGCCCCTCTGGAAGAATGAGCATTTAGAGAGCTCCTGGAGGTTTACAGCTAATAGAGA HS_haplotype2 TGTGCCCCTCTGGAAGAATGAGCATTTAGAGAGCTCCTGGAGGTTTACAGCTAATAGAGA ************************************************************ HS_haplotype1 AATGGAGACCCTGATTTGAATAAATGTCTGTGCATACTTCACCCACTCCGTTTCTAAGAA HS_assemblymutate AATGGAGACCCTGATTTTAATAAATGTCTGTGCATACTTCACCCACTCCGTTTCTAAGAA HS_haplotype2 AATGGAGACCCTGATTTTAATAAATGTCTGTGCATACTTCACCCACTGCGTTTCTAAGAA ***************** ***************************** ************ HS_haplotype1 AATAAACTCATGATTAACCTCCTTGGGCAGGTGGGGGCGCCCTAAAGGCGTGAGATTTAA HS_assemblymutate AATAAACTCATGATTAACCTCCTTGGGCAGGTGGGGGCGCCCTAAAGGCGTGAGATTTAA HS_haplotype2 AATAAACTCATGATTAACCTCCTTGGGCAGGTGGGGGCGCCCTAAAGGCGTGAGATTTAA ************************************************************ HS_haplotype1 CTCAGGCCCCAAATATGACGTGTCAAATTTATGGTATCTAGGGGACATCCTCTCTCTGGT HS_assemblymutate CTCAGGCCCCAAATATGACGTGTCAAATTTATGGTATCTAGGGGACATCCTCTCTCTGGT HS_haplotype2 CACAGGCCCCATATATGACGTGTCAAATTTATGGTATCTAGGGGACGTCCTCTCTCTGGT * ********* ********************************** ************* HS_haplotype1 AGTCTTTTTCATTTTCCAATTTAAATAATTGCTGGGGAGAGACTTGGACAGGGAGGAAAA HS_assemblymutate AGTCTTTTTCATTTTCCAATTTAAATAATTGCTGGGGAGAGACTTGGACAGGGAGGAAAA HS_haplotype2 AGTCTTTTTCATTTTCCAATTTAAATAATTGCTGGGGAGAGACTTGGACAGGAAGGAAAA **************************************************** ******* HS_haplotype1 AAATGGATCAGTAAAACATGAATAAGACAGGCCCCTGTAATCCAAGCAGTAAACTGGGG- HS_assemblymutate AAATGGATCAGTAAAACATGAATAAGACAGGCCCCTGTAATCCAAGCAGTAAACTGGGGA HS_haplotype2 AAATGGATCAGTAAAACATGAATAAGACAGGCCCCTGTAATCCAAGCAGTAAACTGGGG- *********************************************************** HS_haplotype1 GTTGGCTTAAGACTGCTGGGCACCCTCATGCTAATTACAACCCGCGTGTGGCTGGGCTGC HS_assemblymutate GTTGGCTTAAGACTGCTGGGCACCCTCATGCTAATTACAACCCGCGTGTGGCTGGGCTGC HS_haplotype2 GTTGGCTTAAGACTGCTGGGCACCCTCATGCTAAGTACAACCCGCGAGTGGCTGGGCTGC ********************************** *********** ************* HS_haplotype1 TCCAAAACCACCCCTCGCTTATCCAGGAATTGGACTCAGTGACCACGGAGTTCACCTCAC HS_assemblymutate TCCAAAACCGCGCCTCGCTTATCCGGGAATTGGACTCAGTGACCACGGAGTTCACCTCAC HS_haplotype2 TCCAAAACCGCGCCTCGCTTATCCGGGAATTGGACTCAGTGACCACGGAGTTCACCTCAC ********* * ************ *********************************** HS_haplotype1 GCCTTCATCCATTTCCCCTGACCAGCTACTTCAATTAGGACACAGAATAAGCCCTTAGGT HS_assemblymutate GCCTTCATCCATTTCCCCTGACCAGCTACTTCAATTAGGACACAGAATAAGCCCTTAGGT HS_haplotype2 GCCTTCATCCATTTCCCCTGACCAGCTACTTCAATTAGGACACAGAATAAGCCCTTAGGT ************************************************************ HS_haplotype1 TTCAATGTCTTTAACAGATGCTTTCTGGGAGGAGCACTGAGAGAGAGACATTCCCCTCGT HS_assemblymutate TTCAATGTCTTTAACAGATGCTTTCTGGGAGGAGCACTGAGAGAGAGACATTCCCCTCGT HS_haplotype2 TTCAATGTCTTTAACAGATGCTTTCTGGGAGGAGCACGGAGAGAGAGACATTCCCCTCGT ************************************* ********************** HS_haplotype1 GGGGGTAGATGTTGGGCTCTTACCTTGGAGATAAAAGAGAGGAGGCCCCGAGTTCCACCG HS_assemblymutate GGGGGTAGATGTTGGGCTCTTACCTAGGAGATAAAAGAGAGGAGGCCCCGAGTTCCACCG HS_haplotype2 GGGGGTAGATGTTGGGCTCTTACCTAGGAGATAAAAGAGAGGAGGCCCCGAGTTCCACCG ************************* ********************************** HS_haplotype1 ATTGATAGGTAAAAAAATAATAACAGACAGAGGTTCATCGCAGAAAAAAGTGAGTTCAGA HS_assemblymutate ATTGATAGGTAAAAAAATAATAACAGACAGAGGTTCATCGCAGAAAAAAGTGAGTTCAGA HS_haplotype2 ATTGATAGGTAAAAAAATAATAACAGACAGAGGTTCATCGCAGAAAAAAGTGAGTTCAGA ************************************************************ HS_haplotype1 TTACAGAGTGTGTCAGGGAAGGGGGGACAGGCCCGGCCCAATAAGTAATATTTGGACCAG HS_assemblymutate TTACAGAGTGTGTCAGGGAAGGGGGGACAGGCCCGGCCCAATCAGTAATATTTGGACCAG HS_haplotype2 TTACAGAGTGTGTCAGGGAAGGGGGGACAGGCCCGGCCCAATCAGTAATATTTGGACCAG ****************************************** ***************** HS_haplotype1 AATGAATGGGATCACTTTGTTTTGTTTTCTATACTACTACATGTGATCAGAATTGTTGGA HS_assemblymutate AATGAATGGGATCACTTTGTTTTGTTTTCTATGCTACTACATGTGATCAGAAATGTTGGA HS_haplotype2 AATGAATGGGATCACTTTGTTTTGTTTTCTATGCTACTACATGTGATCAGAAATGTTGGA ******************************** ******************* ******* HS_haplotype1 AGGTGCGATTGGAAACTAACTCAAAGAAAGGGTGGCTTCCACCAAGTGCTTTTCCTCTCT HS_assemblymutate AGGTGAGATTGGAAACTAACTCAAAGAAAGGGTGGCTTCCACCAAGTGCTTTTCCTCTCT HS_haplotype2 AGGTGAGATTGGAAACTAACTCAAAGAAAGGGTGGCTTCCACCAAGTGCTTTTCCTCTCT ***** ****************************************************** HS_haplotype1 CCCTGCTCGGGCCTGTGTCTCACCCAAAAACCTTACTCAAAATATTTTTTTTTCAGTTTC HS_assemblymutate CCCTGCCCGGGCCTGTGTCTCACCCAAAAACCTTACTCAAAATATTTTTTTTTCAGTTTC HS_haplotype2 CCCTGCCCGGGCCTGTGTCTCACCCAAAAACCTTACTGAAAATATTTTTTTTTCAGTTTC ****** ****************************** ********************** HS_haplotype1 CACTGGGCGCAGCCACTCCTGGGCAAAGCATACTGAGAGCAGCATCCATAATCTACGCTG HS_assemblymutate CACTGGGCGCAGCCACTCCTGGGCAAAGCATACTGAGAGCAGCATCCATAATCTACGCTG HS_haplotype2 CACTGGGCGCAGCCACTCCTGGGCAAAGCATACTGAGAGCAGCATCCATAATCTACGCTG ************************************************************ HS_haplotype1 GGCACTGTAACCCTTGAGGACCATCTCTGGCCTGAGTGCAATAAAGTCTAAGTAGTAACA HS_assemblymutate GGCACTGTAACCCTTGAGGACCATCTCTGGCCTGAGTGCAATAAAGTCTAAGTAGTAACA HS_haplotype2 AGCTCTGTAACCCTTGAGGACCATCTCTGGCCTGAGTGCAATAAAGTCTAAGTAGTAACA ** ******************************************************** HS_haplotype1 CTCCTCCTCAGTATCCAGGAGAAAGGTTTAATGCTCATCAGCGCCTGTGATGGCTGTTTT HS_assemblymutate CTCCTCCTCAGTATCCAGGAGAAAGGTTTAATGCTCATCAGCGCCTGTGATGGCTGTTTT HS_haplotype2 CTCCTCCTCAGTATCCAGGAGAAAGGTTTAATGCTCATCAGCGCCTGTGATGGCTGTTTT ************************************************************ HS_haplotype1 TATAGTGATTGAGGCTGCCTGCCTCAAAAAAGCCTAGGTTTATTATCCCGCTCTTCGCGC HS_assemblymutate TATAGTGATTGAGGCTGCCTGCCTCAAAAAAGCCTAGGTTTATTATCCCGCCCTTCGCGC HS_haplotype2 TATAGTGATTGAGGCTGCCTGCCTCAAAAAAGCCTAGGTTTATTATCCCGCCCTTCGCGC *************************************************** ******** HS_haplotype1 GTGGCCAGGCTGTCCTGGAGTCGGCGGCATGTACAAGGGAAAAGACCCTAACTGCAGGTT HS_assemblymutate GTGGCCAGGCTGTCCTGGAGTCGGCGGCATGTACAAGGGAAAAGACCCTAACTGCAGGTT HS_haplotype2 GTGGCCAGGCTGTCCTGGAGTCGGCGGCATGTACAAGGGAAAAGACCCTAACTGCAGGTT ************************************************************ HS_haplotype1 CTATAATTACAAAGTATTGACAAGATTGAGGTTCAATAATGTTAGAGATGAAATTTTATT HS_assemblymutate CTATAATTACAAAGTATTGACAAGATTGAGGTTCAATAATGTTAGAGATGAAATTTTATT HS_haplotype2 CTATAATTACAAAGTATTGACAAGATTGAGGTTCAATAATGTTAGAGATGAAATTTTATT ************************************************************ HS_haplotype1 TTGATGTTTTTCAGACGAATACTTAACTATTTTTTCTACTATAAAAAACTGGATATCTCA HS_assemblymutate TTGATGTTTTTCAGACGAATACTTAACTATTTTTTCTACTATAAAAAACTGGATATCTCA HS_haplotype2 TTGATGTTTTTCAGACGAATACTTAACTATTTTTTCTACTATAAAAAACTGGATATCTCA ************************************************************ HS_haplotype1 GCTCACCTGGTTGCATAGTAGAATGGGGGACGAGATACTTTTTTTTCTATACTCCTGCCC HS_assemblymutate GCTCACCTGGTTTCATAGTAGAATGGGGGACGAGATACTTTTTTTTCTATACTCCTGCCC HS_haplotype2 GCTCACCTGGTTTCATAGTAGAATGGGGGACGAGATACTTTTTTTTCTATACTCCTGCCC ************ *********************************************** HS_haplotype1 TTCATTAAGTAGATTTGCCTCCCATCTTGGTCATCTGAAGGAAGCTCATCTGTGGCAAAA HS_assemblymutate TTCATTAAGTAGTTTTGCCTCCCATCTTGGTCATCTGAAGGAAGCTCATCTGTGGCAAAA HS_haplotype2 TTCATTAAGTAGTTTTGCCTCCCATCTTGGTCATCTGAAGGAAGCTCATCTGAGGCAAAA ************ *************************************** ******* HS_haplotype1 TAGGCAGAGTTCCTTGGATTTGTGAGAAGTAACAGCCTCACAACCTTAAGATGGAGGAAA HS_assemblymutate TAGGCAGAGTTCCTTGGATTTGTGAGAAGTAACAGCCTCACAACCTTAAGATGGAGGAAA HS_haplotype2 TAGGCAGAGGTCCTTGGATTTGTGAGAAGTAACAGCGTCACAACCTTAAGATGGAGGAAA ********* ************************** *********************** HS_haplotype1 AAATTGCTCAGAGATGATATATTTCTTTTGTTTAACTCATCTCAATGTAAAGTCTACAGC HS_assemblymutate AAATTGCTCAGAGATGATATATTTCTTTTGTTTAACTCATCTCAATGTAAAGTCTACAGC HS_haplotype2 AAATTGCTCAGAGATGATATATTTCTTTTGTCTAACTCATCTCAATGTAAAGTCTACAGC ******************************* **************************** HS_haplotype1 CGAGTGAGTAAATTATACAAAAAAACATAGCCCTTTTCTATATTTCTCAAAACATCAGCT HS_assemblymutate CGAGTGAGTAAATTATACAAAAAAACATAGCCCTTTTCTATATTTCTCAAAACATCAGCT HS_haplotype2 CGAGTGAGTAAATTATACAAAAAAACCTAGCCCTTTTCTATATTTCTCAAAACATCAGCT ************************** ********************************* HS_haplotype1 ATATCACATGCATAGCTAATTCAGACTTAAAGCAACCAGCGTTGTTTCTCCTGAAAATCA HS_assemblymutate ATATCACATGCATAGCTAATTCAGACTTAAAGCAACCAGCGTTGTTTCTCCTGAAAATCA HS_haplotype2 ATATCACATGCATAGCTAATTCAGACTTAAAGCAACCAGCGTTGTTTCTCCTGAAAATCA ************************************************************ HS_haplotype1 TCCCTTGAATTACACACCCCTAGCTAATCCTTTCACGAAACTATGAATGATAGTAGCTTT HS_assemblymutate TCCCTTGAATTACACACCCCTAGCTAATCCTTTCACGAAACTATGAATGATAGTAGCTTT HS_haplotype2 TGCCTTGAATTACACACCCCTAGCTAATCCTTTCACGAAACTATGAATGATAGTAGCTTT * ********************************************************** HS_haplotype1 TTTTGAGCAATGAGTGTCTAGAAAATCAGGGCGAAGCCCCTGTATCTGTGCCGAGGCGGA HS_assemblymutate TTTTGAGCAATGAGTGTCTAGAAAATCAGGGCGAAGCCCCTGTATCTGTGCCGAGGCGGA HS_haplotype2 TTTTGAGCAATGAGTGTCTAGAAAATCAGGGCGAAGCCCCTGTATCTGTGCCGAGGCGGA ************************************************************ HS_haplotype1 TTCTCCTGGAGCTACATCCAGCAATGACTTTTATGTAATGTGTTTTGGTGCTGTAGGGAA HS_assemblymutate TTCTCCTGGAGCTACATCCAGCAATGACTTTTATGTAATGTGTTTTGGTGCTGTAGGGAA HS_haplotype2 TTCTCCTGGAGCTACATTGAGCAATGTCTTTTATGTAATGTGTTTTGGTGCTGTAGGGAA ***************** ******* ********************************* HS_haplotype1 AGACAGCCACTCCTTCGGATGGAATGGTTGGAGGTCTCTCCTAGGTTCCCTCCCCCCACC HS_assemblymutate AGACAGCCACTCCTTCGGATGGAATGGTTGGAGGTCTCTCCTAGGTTCCCTCCCCCCACC HS_haplotype2 AGACAGCCACTCCTTCGGATGGAATGGTTGGAGGTCTCTCCTAGGTTCCCTCCCCCCACC ************************************************************ HS_haplotype1 AACAAAATTTCAGCTGAGAAATTCTTTCATGACTTTTCCTCCTCCTCCCTAGACAGGGAC HS_assemblymutate AACAAAATTTCAGCTGAGAAATTCTTTCATGACTTTTCCTCCCCCTCCCTAGACAGGGAC HS_haplotype2 AACAAAATTTCAGCTGAGAAATTCTTTCATGACTTTTCCTCCCCCTCCCTAGACAGGGAC ****************************************** ***************** HS_haplotype1 CACGCTCCAGCCCTTTTCAGATGACATTTGCTTCTCAGAATGAATTCAAGCAGCAGAGCA HS_assemblymutate CACGCTCCAGCCCTTTTCAGATGACATTTGCTTCTCAGAATGACTTCAAGCAGCAGAGCA HS_haplotype2 CACGCTCCAGCCCTTTTCAGATGACATTTGCTTCTCAGAATGACTTCAAGCAGCAGAGCA ******************************************* **************** HS_haplotype1 ATGTCTTAGGCAGTCCACCTGGAAACACCTGCCTCTGCAGGTACCTTATGCTGTGCCAGT HS_assemblymutate ATGTCTTAGGCAGTCCACCTGGAAACACCTGCCTCTGCAGGTACCTTATGCTGTGCCAGT HS_haplotype2 ATGTCTTAGGCAGTCCACCTGGAAACACCTCCCTCTGCAGGTACCTTATGCTGTGCCAGT ****************************** ***************************** HS_haplotype1 GATGGAGTCTTTAAAATGGAGCCTGTATTGGAGAATAATTTGTTTTCTGCCAAAGGATTT HS_assemblymutate GATGGAGTCTTTAAAATGGAGCCTGTATTGGAGAATAATTTGTTTTCTGCCAAAGGATTT HS_haplotype2 GATGGAGTCTTTAAAATTGAGCCTGTATTAGAGAATAATTTTTTTTCTGCCAAAGGATTT ***************** *********** *********** ****************** HS_haplotype1 TTGTTATATTCTTTAAATGTAAAAATGAACATTTCAGCTGGAAGCATCTCTCCTGCCCTT HS_assemblymutate TTGTTATATTCTTTAAATGTAAAAATGAACATTTCAGCTGGAAGCATCTCTCCTGCCCTT HS_haplotype2 TTGTTATATTCTTTAAATGTAAAAATGAACATTTCAGCTGGAAGCATCTCTCCTGCCCTT ************************************************************ HS_haplotype1 TTAAAAAAATGCTTGGCCTCAAATATATTAAATATCAAACGGTGGGGCACCTCTGGATTG HS_assemblymutate TTAAAAAAATGCTTGGCCTCAAATATATTAAATATCAAACGGTGGGGCACCTCTGGATTG HS_haplotype2 TTAAAAAAATGCTTGGCCTCAAATATATTAAATATCAAACGGTGGGGCACCTCTAGATTG ****************************************************** ***** HS_haplotype1 ATCCAAATGAATATTTATATTTGCATCAAATCTGGAAATACATCACAGTCTAGGATGGTC HS_assemblymutate ATCCAAATGAATATTTATATTTGCATCAAATCTGGAACTACATCACAGTCTAGGATGGTC HS_haplotype2 ATCCAAATGAATATTTATATTTGCATCAAATCTGGAACTACATCACAGTCTAGGATGGTC ************************************* ********************** HS_haplotype1 AGGAGTTATGTGATCCTCAGCTCTTGTCTCCAGACCTGGAGTGAATAAAATCCACGTGCC HS_assemblymutate AGGAGTTATGTGATCCTCAGCTCTTGTCTCCAGACCTGGAGTCAATAAAATCCACGTGCC HS_haplotype2 AGGAGTTATGTGATCCTCAGCTCTTGTCTCCAGACCTGGAGTCAATAAAATCCACGTGCC ****************************************** ***************** HS_haplotype1 TCTTTATGATTCTTGGTGAGGACATGGCAGCACTCTACATATGAGTTGTTTTTGTTAAAT HS_assemblymutate TCTTTATGATTCTTGGTGAGGACATGGCAGCACTCTACATATGAGTTGTTTTTGTTAAAT HS_haplotype2 TCTTTATGATTCTTGGTGAGGACATGGCAGCACTCTACATATGAGTTGTTTTTGTTAAAT ************************************************************ HS_haplotype1 TTTTTTGTTGCTGGCCTCCTCAGGCTGAGGCTCATTTAAGATCCTTCCATGACACTGCTT HS_assemblymutate TTTTTTGTTGCTGGCCTCCTCAGGCTGAGGCTCATTTAAGATCCTTCCATGACACTGCTT HS_haplotype2 TTTTTTGTTGCTGGCCTCCTCAGGCTGAGGCTCATTTAAGATCCTTCCATGACACTGCTT ************************************************************ HS_haplotype1 ATGTTGTGAGACGGCTCACTAAGTATGAAGAATTAGGTGACGAAGATGTGATTAGTTTTA HS_assemblymutate ATGTTGGGAGACGGCTCACTAAGTATGAAGAATTAGGTGACAAAGATTTGATTAGTTTTA HS_haplotype2 ATGTTGGGAGACGGCTCACTAAGTATGAAGAATTAGGTGACAAAGATTTGATTAGTTTTA ****** ********************************** ***** ************ HS_haplotype1 TTTAATTGCTCGACAGATAAGGACCGCAAACATGGTTTCTTTTTTTACAGGCTCCTGTGT HS_assemblymutate TTTAATTGCTCGACAGATACGGACCGCAAACATGGTTTCTTTTTTTACAGGCTCCTGTGT HS_haplotype2 TTTAATTGCTCGACAGATACGGACCGCAAACATGGTTTCTTTTTTTACAGGCTCCTGTGT ******************* **************************************** HS_haplotype1 TTCGTTTACAGAAGCTTATCTACCTTCAAGTAAAAGGCTCACGCCTGGCTTAGTAGAGAA HS_assemblymutate TTCTTTTACAGAAGCTTATCTACCCTCAAGTAAAAGGCTCACGCCTGGCTTAGTAGAGAA HS_haplotype2 TTCTTTTACAGAAGCTTATCTACCCTCAAGTAAAAGGCTCACGCCTGGCTTAGTAGAGAA *** ******************** *********************************** HS_haplotype1 AAATTGCCGGGCGCGCGCCATGGACGCACGGTCAGGCTGGGCGCGGTTCATGAGAGTCTT HS_assemblymutate AAATTGCCGGGCGCGCGCCATGGACGCACGGTCAGGCTGGGCGCGGTTCATGAGAGTCTT HS_haplotype2 AAATTGCCGGGCGCGCGCCATGGACGCACGGTCAGGCTGGGCGCGGTTCATGAGAGTCTT ************************************************************ HS_haplotype1 CAAGGCAACTTTGACTGTGATCCAAATACTTAACTTCGGACGAAGACAAGAAACAATATT HS_assemblymutate CAAGGCAACTCTGACTGTGATCCAAATACTTAACTTCGGACGAAGACAAGAAACAATATT HS_haplotype2 CAAGGCAACTCTGACTGTGATCCAAATACTTAACTTCGGACGAAGACAAGAAACAATATT ********** ************************************************* HS_haplotype1 CTTCCAGTCTCCTTTTTAGAATATCTTCGGCCGGGAACTGCTATCTGCTTTGCCTGCTAA HS_assemblymutate CTTCCAGTCTCCTTTTTAGAATATCTTCGGCCGGGAACTGCTATCTGCTTTGCCTTCTAA HS_haplotype2 CTTCCAGTCTCCTTTTTAGAATATCTTCGGCCGGGAACTGCTATCTGCTTTGCCTTCTAA ******************************************************* **** HS_haplotype1 TTTTTTCTGAGCTGTTTATGTATTTCCTGCAGAGCATGCTCCTTCATGTAGTTGTAATGA HS_assemblymutate TTTTTTCTGAACTGTTTATGTATTTCCTGCAGAGCATGCTCCTTCATGTAGTTGTAATGA HS_haplotype2 TTTTTTCTGAACTGTTTATGTATTTCCTGCAGAGCATGCTCCTTCATGTAGTTGTAATGA ********** ************************************************* HS_haplotype1 TGATTTAGTCCACCTCACCAGATGACATCTGGGTCTCAACCTTCAACTGACCTCCAACTT HS_assemblymutate TGATTTAGTCCACCTCACCAGATGTCATCTGGGTCTCAACCTTCAACTGACCTCCAACTT HS_haplotype2 TGATTTAGTCCACCTCACCAGATGTCATCTGGGTCTCAACCTTCAACTGACCTCCAACTT ************************ *********************************** HS_haplotype1 ATGGGGGCTTCCGGCTGGAAAAACTAGATCCAGCTAGGGCTGGATTACACAAAGACTTTG HS_assemblymutate ATGGGGGCTTCCGGCTGGAAAAACTAGATCCAGCTAGGGCTGGATTACACAAAGACTTTC HS_haplotype2 ATGGGGGCTTCCGGCTGGAAAAACTAGATCCAGCTAGGGCTGGATTACACAAAGACTTTC *********************************************************** HS_haplotype1 CAGTCCCCAACACCATCTCCCTGAGGCCCTTTTACTGGGAAAAAGTCACCCCCTCTCCCA HS_assemblymutate CAGTCCCCAACTCCATCTCCCTGAGGCCCTTTTACTGGGAAAAAGTCACCCCCTCTCCCA HS_haplotype2 CAGTCCCCAACTCCATCTCCCTGAGGCCCTTTTACTGGGAAAAAGTCACCCCCTCTCCCA *********** ************************************************ HS_haplotype1 AGGGTTCCTTTAGTACCCGGGCGGAGGGTTTAGGTGACGGATTGTATGGTACACTGCTTT HS_assemblymutate AGGGTTCCCCTAGTACCCGGGCGGAGGGTTTAGGTGACGGATTGTATGGCACACTGCCTT HS_haplotype2 AGGGTTCCCCTAGTACCCGGGCGGAGGGTTTAGGTGACGGATTGTATGGCACACTGCCTT ******** *************************************** ******* ** HS_haplotype1 AGTAAGGAAGAAGTCAGGAAATTAGAAAAGAGTGGTCGAACAGGTGTACCAGAGAACCTG HS_assemblymutate AGAAAGGAAGAAGTCAGGAAATTAGAAAAGAGTGGTCGAACAGGTGTACCAGAGAACCTG HS_haplotype2 AGAAAGGAAGAAGTCAGGAAATTAGAAAAGAGTGGTCGAACAGGTGTACCAGAGAACCTG ** ********************************************************* HS_haplotype1 GCTGTGATCCAAAGAAACTCGGCTGTGACTTAGGGTTCAGACGGGCACTGGAGTTGGGCT HS_assemblymutate GCTGTGATCCAAAGAAACTCGGCTGTGACTTAGGGTTCAGACGGGCACTGGAGTTGGGCT HS_haplotype2 GCTGTGATCCAAAGAAACTCGGCTGTGACTTAGGGTTCAGACGGGCACTGGAGTGGGGCT ****************************************************** ***** HS_haplotype1 ---GCTATATACAGCTACAAAACTCCACACCCGCCGAGTTACCTGGATAAAAAAGGTTGT HS_assemblymutate AAAGCTATATACAGCTACAAAACTCCACACCCGCCGAGTTACCTGGATAAAAAAGGTTGT HS_haplotype2 ---GCTATATACAGCTACAAAACTCCACACCCGCCGAGTTACCTGGATAAAAAAGGTTGT ********************************************************* HS_haplotype1 TTGGAATCTTTTTCCAGCTTTTTGTGCAGTTTCTCCATTCTCATTGCATGATGTTTCAAG HS_assemblymutate TTGGAATCTTTTTCCAGCTTTTTGTGCAGTTTCTCCATTCTCATTGCATGATGTTTCAAG HS_haplotype2 TTGGAATCTTTTTCCAGCTTTTTGTGCAGTTTCTCCATTCTCATTGCATGATGTTTCAAG ************************************************************ HS_haplotype1 CAAACTTGGGTCTATGTGCCTGCAAGGAAGGAAATAAAATTTGAGATAAGCAGAGCAACC HS_assemblymutate CATACTTGGGTCTATGTGCCTGCAAGGATGAAAATAAAAATTGAGATACGCAGAGCAACC HS_haplotype2 CATACTTGGGTCTATGTGCCTGCAAGGATGAAAATAAAAATTGAGATACGCAGAGCAACC ** ************************* * ******** ******** *********** HS_haplotype1 TTGTATTGAGAAAACAATGACTAACTCAGCTCTGCCGGGCTGGTTGTCTTGGCTCAAAGA HS_assemblymutate TTGTATTGAGAAAACAATGACTAACTCAGCTCTGCCGGGCTGGTTGTCTTGGCTCAAAGA HS_haplotype2 TTGTATTGAGAAAACAATGACTAACTCAGCTCTGCCGGGCTGGTTGTCTTGGCTCAAAGA ************************************************************ HS_haplotype1 ATACTTCTGTTCTTGATTGACATAACAAAATGAGATATCTGGGACGATACAAGAAAAAAA HS_assemblymutate ATACTTCTGTTCTTGATTGACATAACAAAATGAGATATCTGGGATGATACAAGAAAAAAA HS_haplotype2 ATACTTCTGTTCTTGATTGACATAACAAAATGAGATATCTGGGATGATACAAGAAAAAAA ******************************************** *************** HS_haplotype1 TTGTCTGGACAGAGCCTAACATATCCATTCAGAGTGTTAAAGTCTCAGCACACTCGGAGT HS_assemblymutate TTGTCTGGACAGAGCCTAACATATCCATTCAGAGTGTTAAAGTCTCAGCACACTCGGAGT HS_haplotype2 TTGTCTGGACAGAGCCTAACATATCCATTCAGAGTGTTAAAGTCTCAGCACACTCGGAGT ************************************************************ HS_haplotype1 AGATTCAGTGCTGCAGAAATCCAACTGCTGGGAGTCTACTAAAAAGAAAATCCCCAGCCC HS_assemblymutate AGATTCAGTGCTGCAGAAATCCAACTGCTGGGAGTCTACTAAAAAGAAAATCCCCAGCCC HS_haplotype2 AGATTCAGTGCTGCAGAAATCCAACTGCTGGGAGTCTACTAAAAAGAAAATCCCCAGCCC ************************************************************ HS_haplotype1 TCCTGGGCTGGTCTTGGCTCAGAGCCTCCTTGAGATGGCTCAAGTAGCAATGAGTGAATA HS_assemblymutate TCCTGGGCTGGTCTTGGCTCAGAGCCTCCTTGAGATGGCTCAAGTATCAATGAGTGAATA HS_haplotype2 TCCTGGGCTGGTCTTGGCTCAGAGCCTCCTTGAGATGGCTCAAGTATCAATGAGTGAATA ********************************************** ************* HS_haplotype1 AAAGAAAAAAGGTGATCTCAC-TTTTAAAAGCAACCTTGGTGGGATGCACTTACAAACCA HS_assemblymutate AAAGAAAAAAGGTGATCTCACTTTTTAAAAGCAACCTTGGTGGGATGCACTTACAAACCA HS_haplotype2 AAAGAAAAAAGGTGATCTCAC-TTTTAAAAGCAACCTTGGTGGGATGCACTTACAAACCA ********************* ************************************** HS_haplotype1 ATAAAAGCACCGTGTTCTGACATGGAGGCCTCGGTCAAAGAAGCATTTTATGCAACTAAA HS_assemblymutate ATAAAAGCACCGTGTTCTGAGATGGAGGCCTCGGTCAAACAAGCATTTTATGCGACTAAA HS_haplotype2 ATAAAAGCACCGTGTTCTGAGATGGAGGCCTCGGTCAAACAAGCATTTTATGCGACTAAA ******************** ****************** ************* ****** HS_haplotype1 TGGTTGTGCTGTGAGCCAGAAGCTATGTGCCACCCAAATAAAACGGAGCAAGGCCTCCAG HS_assemblymutate TGGTTGTGCTGTGAGCCAGAAACTATGTGGCACCCAAATAAAACGGAGCAAGGCCTCAAG HS_haplotype2 TGGTTGTGCTGTGAGCCAGAAACTATGTGGCACCCAAATAAAACGGAGCAAGGCCTCAAG ********************* ******* *************************** ** HS_haplotype1 CAGACCAGTGGCCTGTTGAATTCTTATCCTATAATAGGCAATGTGGCCTGCCAGGAACTC HS_assemblymutate CAGACCAGTGGCCTGTTGAATTCTTATCCTATAATAGGAAATGTGGCCTGCCAGGAACTC HS_haplotype2 CAGACCAGTGGCCTGTTGAATTCTTATCCTATAATAGGAAATGTGGCCTGCCAGGAACTC ************************************** ********************* HS_haplotype1 CGTTGGGAGGGCCCGGGACCCAGCCTCTGCTCCCCAAATATGAGGCATTTATTTCTCCTT HS_assemblymutate CGTTGGGAGGGCCCGGGACCCAGCCTCTGCTCCCCAAATATGAGGCATTTATTTCTCCTT HS_haplotype2 CGTTGGGAGGGCCCGGGACCCAGCCTCTGCTCTCCAAATATGAGGCATTTATTTCGCCTT ******************************** ********************** **** HS_haplotype1 CAAAATAAGTACTACCATCCTCCCTGGGCCTAAATCCCTTCTCCACAGAGGTCACCCGGG HS_assemblymutate CAAAATAAGTACTACCATCCTCCCTGGGCCTAAATCCCTTCTCCACAGAGGTCACCCGGG HS_haplotype2 CAAGATAAGTACTACCATCCTCCCTGGGCCTAAATCCATTCTCCACAGAGGTCACCCAGG *** ********************************* ******************* ** HS_haplotype1 GTAGGATTGGCCAAAGGCTCGCGCCCGGGCGCACCGCGGTACTTAATAATCGATCTAAAC HS_assemblymutate GTAGGATTGGCCAAAGGCTCGCGCCCGGGCGCACCGCGGTACTTAATAATCGATCTAAAC HS_haplotype2 GTAGGGTTGGCCAAAGGGTCGCGCCCGGGCGCACCGCGGTACTTAATAATCGATCTAAAC ***** *********** ****************************************** HS_haplotype1 TCCCCCACTTAAAAGCCAGTATCGCTGGCCAACACCCAGTCAAGTACAGTGAGTCTTGAA HS_assemblymutate TCCCCCACTTAAAAGCCAGTATTGCTGGCCAACACCCAGTCAAGTGCAGTGAGTCTTGAC HS_haplotype2 TCCCCCACTTAAAAGCCAGTATTGCTGGCCAACACCCAGTCAAGTGCAGTGAGTCTTGAC ********************** ********************** ************* HS_haplotype1 TAGTAGACCAAATCGTGTACGGGAGTTGAAAAATGAAGATCCAGCCTTCCTCGTGAGGCA HS_assemblymutate TAGTAGACCAGATCGTGTACGTGAGTTGAAAAATGAAGATCCAGCCTTCTTCCTGAGGCA HS_haplotype2 TAGTAGACCAGATCGTGTACGTGAGTTGAAAAATGAAGATCCAGCCTTCTTCCTGAGGCA ********** ********** *************************** ** ******* HS_haplotype1 GGAGAGAACAAGGGACATATTATTATGTAACTGGAAGCTACTGGGAGAAAATCCTTCTTC HS_assemblymutate GGAGAGAACAAGGGACATATTATAATGCAACTGGAAGCTACTGGGAGAAAATCCTTCTTC HS_haplotype2 GGAGAGAACAAGGGACATATTATAATGCAACTGGAAGCTACTGGGAGAAAATCCTTCTTC *********************** *** ******************************** HS_haplotype1 AAGACAGTAAAGAGCCAGACAAACTTCACATGATACCATTCCAGATACTTGCATTTCATT HS_assemblymutate AAGACAGTAAAGAGCCAGACAAACTTCACATCATACCATACCAGATACTTGCATTTCATT HS_haplotype2 AAGACAGTAAAGAGCCAGACAAACTTCACATCATACCATACCAGATACTTGCATTTCATT ******************************* ******* ******************** HS_haplotype1 ATTTATTTTTCTAAGGTCAGCCGGGTCTGGGTTTTCATGTGCTGCTTCCCTCCTTTGGAA HS_assemblymutate ATTTATTTCTCTAAGGTCAGCCGGGTCTGGGTTTTCATGTGCTGCTTCCCTCCTTTGGAA HS_haplotype2 ATTTATTTCTCTAAGGTCAGCCGGGTCTGGGTTTTCATGTGCTGCTTCCCTCCTTTGGAA ******** *************************************************** HS_haplotype1 ACCAGAAATTGCTCCTGTCTTTATTTTCTCAGCCCTGAAAACAGGAAATAAAGTGCTGCG HS_assemblymutate ACCAGAAATTGCTCCTGTCTTTATTTTCTCAGCCCTGAAATCAGGAAATAAAGTGCTGCG HS_haplotype2 ACCAGAAATTGCTCCTGTCTTTATTTTCTCAGCCCTGAAATCAGGAAATAAAGTGCTGCG **************************************** ******************* HS_haplotype1 AAAAGAAAATATCCCACACCACCATAATTGTTGTGTATTTATTTTGTTTTCCTTGGACAC HS_assemblymutate AAAAGAAAATATCCCACACCACCATAATTGTTGTGTATTTATTTTGTTTTCCTTGGACAC HS_haplotype2 AAAAGAAAATATCCCACACCACCATAATTGTTGTGTATTTATTTTGTTTTCCTTGGACAC ************************************************************ HS_haplotype1 ATTAAAAATGGACAGGCGAGGGCTCTGCTTCAGATTTCTTTCTAACAAAACGTTTTCCAA HS_assemblymutate ATTAAAAATGGACAGGCGAGGGCTCTGCTTCAGATTTCTTTCTAACAAAACGTTTTCCAA HS_haplotype2 ATTAAAAATGGACAGGCGAGGGCTCTGCTTCAGATTTCTTTCTAACAAAACGTTTTCCAA ************************************************************ HS_haplotype1 TTCCTCTTCTCCCATTATGAGATGATGGGGTAAACTAGCTCCTTGTACCTCTTTTGTAAA HS_assemblymutate TGCCTCTTCTCACATTATGAGATGATGGGGTAAACTAGCTCCTTGTACCTCTTTTGTAAA HS_haplotype2 TGCCTCTTCTCACATTATGAGATGATGGGGTAAACTAGCTCCTTGTACCTCTTTTGTAAA * ********* ************************************************ HS_haplotype1 TTTTTTTAATCCCAGCTCACTCCCCATTTCACTATTACTAACCATTGAGGGGAAGATGCG HS_assemblymutate TTTTTTTAATCCCAGCTCACTCCCCATTTCACTATTACTAACCATTGAGGGGAAGATGCG HS_haplotype2 TTTTTTTAATCCCAGCTCACTCCCCATTTCACTATTACTAACCATTGAGGGGAAGATGCG ************************************************************ HS_haplotype1 GGAGCAGCAATGTCTGACCCATTCCCGGGATTCTATAAATGCAAGGAATGGGAATAACTG HS_assemblymutate GGAGCAGCAATGTCTGACCCATTCCCGGGATTCTATAAATGCAAGGAATGGGAAAAACTG HS_haplotype2 GGAGCAGCAATGTCTGACCCATTCCCGGGATTCTATAAATGCAAGGAATGGGAAAAACTG ****************************************************** ***** HS_haplotype1 AACTCTGAGATCAAAACAGGTGGAAAGGAATGAATAACATTTAAAGTGAGTTGATACTGG HS_assemblymutate AACTCTGAGATCAAAACAGGTGGAAAGGAATGTATAGCATTTAAAGTGAGTTGATACTGG HS_haplotype2 AACTCTGAGATCAAAACAGGTGGAAAGGAATGTATAGCATTTAAAGTGAGTTGATACTGG ******************************** *** *********************** HS_haplotype1 GCTCCAGGGATTAAAAGAAGGACCTCAGTCATATTTGGTTAATTAGTTTTAACTCCATGA HS_assemblymutate GCTCCAGGGATTAAAAGAAGGACCTCAGTCAAATTTGGTTAATTAGTTTTAACTCCATGA HS_haplotype2 GCTCCAGGGATTAAAAGAAGGACCTCAGTCAAATTTGGTTTATTAGTTTTAACTCCATGA ******************************* ******** ******************* HS_haplotype1 AACACCCGAGGCTGGCGTGAGGAGATTTTAATTGCTTTTCAGCGTCTGTCTCTTCCTCAC HS_assemblymutate AACACCCGAGGCTGGCGTGAGGAGATTTTAATTGCTTTTCAGCGTCTGTCTCTTCCTCAC HS_haplotype2 AACACCCGAGGCTGGCGTGAGGAGATTTTAATTGCTTTTCAGCGTCTGTCCCTTCCTCAC ************************************************** ********* HS_haplotype1 TGCATAGAATTGCTGGGGATCGCCCGGATCCAAGAAAAGAACAGTATGGCAGGAGTCCTA HS_assemblymutate TGCATAGAATTGCTGGGGATCGCCCGGATCCAAGAAAAGAACAGTATGGCAGGAGTCCTA HS_haplotype2 TGCATAGAATTGCTGGGGATCGCCCGGATCCAAGAAAAGAACAGTATGGCAGGAGTCCTA ************************************************************ HS_haplotype1 GGGCCGGGACCACTTCAGGGAAAAAAGCAACACTCTGTTTTGATTACATCAGAGGGCACC HS_assemblymutate GGGCCGGGACCACTTCAGGGAAAAAAGCAGCACTCTATTTTGATTACAACAGAGGGCACC HS_haplotype2 GGGCCGGGACCACTTCAGGGAAAAAAGCAGCACTCTATTTTGATTACAACAGAGGGCACC ***************************** ****** *********** *********** HS_haplotype1 ACATAAATGGTGCGCGGTTCCTTTTCACATTTTAGGGGCAGCTTGATTGTATATGAGACC HS_assemblymutate ACATAAATGGTGCGCGGTTCCTTTTCACATTTTAGGGGCAGCTTGATTGTATATGAGACC HS_haplotype2 ACATAAATGGTGCGCGGTTCCTTTTCACATTTTAGGGGCAGCTTGATTGTATATGAGACC ************************************************************ HS_haplotype1 CCACCAAAAAGCTATTCAGTAAACCCCAGCAGATAGGACCCCCTCTGTGTTGCAGTGCAT HS_assemblymutate CCACCAAAAAGCTATTCAGTAAACCCCAGCAGATAGGACCCCCTCTGTGTTGCAGTGCAT HS_haplotype2 CCACCAAAAAGCTATTCAGTAAACCCCAGCAGATAGGACCCCCTTTGTATTGCAGTGCAT ******************************************** *** *********** HS_haplotype1 CTTATATGACTAGAATGCTAATT------ATCTATCGATCTACAGGAGATTTTTATGTAT HS_assemblymutate CTTATATGACTTGAATGCTAATTAGCCCAATCTATCGATCTACAGGAGATTTTTATGTAT HS_haplotype2 CTTAGATGACTTGAATGCTAATT------ATCTATCGATCTACAGGAGATTTTTATGTAT **** ****** *********** ******************************* HS_haplotype1 GGCCTCGGAACGGAGGGGCTCATCCTAGATTTACAATTTCTGGTCTTCATCTAACAGACA HS_assemblymutate GGCCTCGGAACGGAGGGGCTCATCCTAGATTTACAATTTCTGGTCTTCATCTAACAGACA HS_haplotype2 GGCCTCGGAACGGAGGGGCTCATCCTAGATTTACAATTTCTGGTCTTCATCTAACAGACA ************************************************************ HS_haplotype1 GGTGAACAACCCGCCTCGGATTCTCAGTAAACAAATGATATTGAATATATATTAAAACTT HS_assemblymutate GGTGAACAACCCGCCTCGGATTCTCAGTAAACAAATGATATTGAATATATATTAAAACTT HS_haplotype2 GGTGAACAACCCGCCTCGGATTCTCAGTAAACAAATGATATTGAATATATATTAAAACTT ************************************************************ HS_haplotype1 TCACTTTTGCAAAGAGAATCAAGTTTTGTTTTCAGACTTGCAGCTTATTACAGACCGACT HS_assemblymutate TCACTTTTGCAAAGAGAATCAAGTTTTGTTTTCAGACTTGCAGCTTATTACAGACCGACT HS_haplotype2 TCACTTTTGCAAAGAGAATCAAGTTTTGTTTTCAGACTTGCAGCTTATTACAGACCGACT ************************************************************ HS_haplotype1 GACCTGTCTTGCTCTGTTGCCGGTGGCAGCCTATAGCAACTGTGAGGCAAATGTCCTTCT HS_assemblymutate GACCTGTCTTGCTCTGTTGCCGGTGGCAGCCTATAGCAACTGTGAGGCAAATGTCCTTCT HS_haplotype2 GACCTGTCTTGCTCAGTTGCCGGTGGCAGCCTATAGCAACTGTGAGGCAAATGTCCTTCT ************** ********************************************* HS_haplotype1 CACTTGATATATAAATACGGTTCAGTTTTACTGCAATGGTTGTGGCAGAAGGTACAGCCT HS_assemblymutate CACTTGATATATAAATACGGTTCAGTTTTACTGCAATGGTTGTGGCAGAAGGTACAGCCT HS_haplotype2 CACTTGATATATAAATACGGTTCAGTTTTACTGCAATGGTTGTGGCAGAAGGTACAGCCT ************************************************************ HS_haplotype1 CACTGGAAGTATTGCTGGACCTAATTGAATACACGAGCTCAGAACTCACGCCTGTATTAA HS_assemblymutate CACTGGAAGTATTACTGGACCTAATTGAATACACGAGCTCAGATCTCACGCCTGTATTAA HS_haplotype2 CACTGGAAGTATTACTGGACCTAATTGAATACACGAGCTCAGATCTCACGCCTGTATTAA ************* ***************************** **************** HS_haplotype1 GCAGAGACAGGGCTCTTAGCTTTATAATTAGAGACACATCATATTACTTGGTGTGTTTGC HS_assemblymutate GCAGAGACAGGGCTCTTAGCTTTATAATTAGAGACACATCATATTACTTGGTGTGTTTGC HS_haplotype2 GCAGAGACAGGGCTCTTAGCTTTATAATTAGAGACACATCATATTACTTGGTGTGTTTGC ************************************************************ HS_haplotype1 AAGCTCCCACTCCTATTCACCAAGAACAAAGGAAAAGTAGTGGGTTGTGGTGCCTGGGGA HS_assemblymutate AAGCTCCCACTCCTATTCACCAAGAACAAAGGAAAAGTAGTGGGTTGTGGTGCCTGGGGA HS_haplotype2 AAACTCCCACTCCTATTCACCAAGAACAAAGGAAAAGTAGTGGGTTGAGGTGCCTGGGGA ** ******************************************** ************ HS_haplotype1 GGAAATCAAATGGGAGGAGGGTCCAATACATATCAGTCTCAAACTCCAGACTTCCAATCT HS_assemblymutate GGAAATCAAATGGGAGGAGGGTCCAATACATATCAGTCTCAAACTCCAGACTTCCAATCT HS_haplotype2 GGAAATCAAATGAGAGGAGGGTCCAATACATATCAGTCTCAAACTCCAGACTTCCAATCT ************ *********************************************** HS_haplotype1 ATTCAGCCGCAAAGAAAAGAACAGGCAACATAAAACTGTTTTGTTCTTACACCAACAAGG HS_assemblymutate ATTCAGCCGCAAAGAAAAGAACAGGCAACATAAAACTGTTTTGTTCTTACACCAACAAGG HS_haplotype2 ATTCAGCCGCAAAGAAAAGAACAGGCAACATAAAACTGTCTTGTTCTGACAGCAACAAGG *************************************** ******* *** ******** HS_haplotype1 GAGGCATTCTCTAGGAGGCTGAGTCTGATCAGTAGCTGACTTATTTTTGTTCTCTTGAGG HS_assemblymutate GAGGCATTCTCTAGGAGGCTGAGTCTGATCAGTAGCTGACTTATTTTTGTTCTCTTGAGG HS_haplotype2 GAGGCATTCTCTAGGAGGCTGAGTGTGATCAGTAGCTGACTTATTTTTGTTCTCTTGAGG ************************ *********************************** HS_haplotype1 CCAATTAATAGTAAAACTAGTGAGATTTTAGACAAGCCACCTGGCCATGACAACCAAACC HS_assemblymutate CCAATTAATAGTAAAACTAGTGAGATTTTAGACAAGCCACCTGGCCATGACAACCAAACC HS_haplotype2 CCAATTAATAGTAAAACTAGTGAGATTTTAGACAAGCCACCCGGCCGTGACAACCAAACC ***************************************** **** ************* HS_haplotype1 CAAAGTCTAAACTTCTGTGATCTACCAGTAGCTGGAAATTTATTTCAGATCAACTACAGG HS_assemblymutate CAAAGTCTAAACTTCTGTGATCTACCAGTAGCTGGAAATTTATTTCAGATCAACTACAGG HS_haplotype2 CAAAGTCTAAACTTCTGTGATCTACCAGTAGCTGGAAATTTATTTCAGATCAACTACAGG ************************************************************ HS_haplotype1 TTACCATCAGTCCCTGGGCATAAAATGCAGACAGCAAGCACTCCCTATGTAGGTTAAAAA HS_assemblymutate TTACCATCAGTCCCTGGGCATAAAATGCAGACAGCAAGCACTCCCTCTGTAGGTTAAAAA HS_haplotype2 TCACCATCAGACCCTGGGCATAAAATTCAGACAGCAAGCACTCCCTCTGTAGGTTAAAAA * ******** *************** ******************* ************* HS_haplotype1 TTACAAAGCTGTTCAGACTTGGGCAGGCTGGGCCGGGGAGGGGAGTGTCAAAGGCCCTGG HS_assemblymutate TTACAAAGCTGTTCAGACTTGGGCAGGCTGGGCCGGGGAGGGGAGTGTCAAAGGCCCTGG HS_haplotype2 TTACAAAGCTGTTCAGACTTGGGCAGGCTGGGCCGGGGAGGGGAGTGTCAAAGGCCCTGG ************************************************************ HS_haplotype1 CCTCATTGAAAGTACTTTAGCATCAACTGTAATTGATGTTCAGTCTTCTACACCTCAATA HS_assemblymutate CCTCATTGAAAGTACTTTAGCATCAACTGTAATTTATGTTCAGTCTTCTCCACCTCAATA HS_haplotype2 CCTCATTGAAAGTACTTTAGCATCAACTGTAATTTATGTTCAGTCTTCTCCACCTCAATA ********************************** ************** ********** HS_haplotype1 CCTGATTGAGACCACAGAGAAGTATGGGGGCTGTGGTAGCCGGCCTTGCAAAAAAAACAA HS_assemblymutate CCTGATTGAGATCACAGAGAAGTATGGGGGCTGTGGTAGCCAGCCTTGAAAAAAAAACAA HS_haplotype2 CCTGATTGAGATCACAGAGAAGTATGGGGGCTGTGGTAGCCAGCCTTGAAAAAAAAACAA *********** ***************************** ****** *********** HS_haplotype1 ACTTATTTTAAAGTAGCAATCAAGGCCCTCTGCCTCTTTAAGCCATTCGGGAGAATCCCA HS_assemblymutate ACTTATTTTAAAGTAGCAAGCAAGGCCCTCTGCCTCTTTAAGCCATTCGGGAGAATCCCA HS_haplotype2 ACTTATTTTAAAGTAGCAAGCAAGGCCCTCTGCCTCTTTAAGCCATTCGGGAGAATCCCA ******************* **************************************** HS_haplotype1 GCTTACTGTAATCATTTTGTCTTTAATTCAGTTTGTTTCCTGTGTGTTGGCTGCCACCAC HS_assemblymutate GCTTACTGTAATCATTTTGTCTTTAATTCAGTTTGTTTCCTGTGTGTTGGCTGCCACCAC HS_haplotype2 GCTTACTGTAATCATTTTGTCTTTAATTCAGTTTGTTTCCTGTGTGTTGGCTGCCACCAC ************************************************************ HS_haplotype1 CGCGCGTGACTGGGGGTGGGAGTGTAAACATGCGAGTAGACACCTGGATTCTTGCTTCCC HS_assemblymutate CGCGCGTGACTGGGGGTGGGAGTGTAAACATGCGAGTAGACACCTGGATTCTTGCTTCCC HS_haplotype2 CGCGCGTGACTGGGGGTGCGTGTGTAAACATGCGAGTAGACACCTGTATTCTTGCTTCCC ****************** * ************************* ************* HS_haplotype1 GGCTGTTCCTTCCTTGAAGTATTTTACAATTATTCAACAACCTGGTGGCATGAAAAAGCT HS_assemblymutate GGCTGTTCCTTCCTTGATGTATTTTACAATTATTCAACATCCTTCTGGCATGAAAAAGCT HS_haplotype2 GGCTGTTCCTTCCTTGATGTATTTTACAATTATTCAACATCCTTCTGGCATGAAAAAGCT ***************** ********************* *** *************** HS_haplotype1 CACAAATGTATTTGTATTAATTCTTCCCATCTATTTGAATGCAGATGATCATGGTGCCCT HS_assemblymutate CACAAATGTATTTGTATTAATTCTTCCCATCTATTTGAATGCAGATGATCATGGTGCCCT HS_haplotype2 CACAAATGTATTTGTATTAATTCTTCCCATCTATTTGAATTCAGATGATCATGGTGCACT **************************************** **************** ** HS_haplotype1 GCAGTGTGGGCGCTCTGGAACAGTGGGGCGCCGGGTGGATGGGAATATTTCTCAAATCCA HS_assemblymutate GCAGTGTGGGCGCTCTGGAACAGTGGGGCGCCGGGTGGATGGGAATATTTCTCAAATCCA HS_haplotype2 GCAGTGTGGGCGCTCTGGAACAGTGGGGCGCCGGGTGGATGGGAATATTTCTCAAATCCA ************************************************************ HS_haplotype1 TTCATTCTATCTTTAAGACTTGTCTTGCTGGAGATAATTGTTACTCTTTCATCAACCCAT HS_assemblymutate TTCATTCTATCTTTAAGACTTGTCTTGCTGGAGATAATTGTTACTCTTTCATCAACCCAT HS_haplotype2 TTCATTCTATCTTTAAGACTTGTCTTGCTGGAGATAATTGTTACTCTTTCATCAACCCAT ************************************************************ HS_haplotype1 TTGTAATATCGAGACCTGTAATTTCAGTTG--TTACAGAAGTCTATGCAGAGGATTCTAC HS_assemblymutate TTGTAATATCGAGACCTGTAATTTCAGTTGGTTTACAGAAGTCTATGCAGAGGATTCTAC HS_haplotype2 TTGTAATATCGAGACCTGTAATGTCAGTTG--TTACAGAAGTCTATGCAGAGGATTCTAC ********************** ******* **************************** HS_haplotype1 AAACCTATTTTTATTTAAATCCAACAAACGGGCGGGCTCAGGATTACTTCTCCCTCAAGG HS_assemblymutate AAACCTATTTTTATTTAAATCCAACAAACGGGCGGGCTCAGGATTACTTCTCCCTCAAGG HS_haplotype2 AAACCTAATTTTATTTAAATCCAACAAACGGGCGGGCACAGGATTACTTCTCCCTCAAGG ******* ***************************** ********************** HS_haplotype1 CCTCGGCACTCAAGGGATGGTATGGCTGGCGCCCTGCCTCCGGGCATAGGCTGAGTCACC HS_assemblymutate CCTCGGCACTCAAGGGATGGTATGGCTGGCGCCCTGCCTCCGGGCATGGGCTGAGTCACC HS_haplotype2 CCTCGGTACTCAAGGGATGGTATGGCTGGCGCCCTGCCTCCGGGCATGGGCTGAGTCACC ****** **************************************** ************ HS_haplotype1 TGTGTTTTCTATTTTACAAGTGAAATTTATAATGAGATAGTGGGTAGACCACTGGGTAGG HS_assemblymutate TGGGTTTTCTATTTTACAAGTGAAATTTATAATGAGAAAGTCGGTAGACCACTGGGTAGG HS_haplotype2 TGGGTTTTCTATTTTACAAGTGAAATTTATAATGAGAAAGTCGGTAGACCACTGGGTAGG ** ********************************** *** ****************** HS_haplotype1 GCACATTAATTAGCTGGATCACGCACGCCCCCATGTTGCCAGACCCAGTTACAATAGCTG HS_assemblymutate GCACATTAATTAGCTGGATCACGCACGCCGCCATGTTGCCAGACCCAGTTACAATAGCTG HS_haplotype2 GCACATTAATTAGCTGGATCACGCACGCCGCCATGTTGCCAGACCCAGTTACAATAGCTG ***************************** ****************************** HS_haplotype1 AGGTTAACAGCTAAGGGAGCGTTGGAGACGGAGAAACAGCACTGGAGAATGAAGAATAAT HS_assemblymutate AGGTTAACAGCTAAGGGAGCGTTGGAGACGGAGAAACAGCACTGGAGAATGAAGAATAAT HS_haplotype2 AGGTTAACAGCTAAGGGAGAGTTGGAGACTGAGAAACAGCACTGGAGAATGAAGAATAAT ******************* ********* ****************************** HS_haplotype1 ATAACAAATCTACAATGTCATTGGGAAGGCGCGGCGTTGTTAACAAAGTGGGGCGCCCCC HS_assemblymutate ATAACAAATCTACAATGTCATTGGGAAGGCGCGGCGTTGTTAACAAAGTGGGGCGCCCCC HS_haplotype2 ATAACAAATCTACAATGTCATTGGGAAGGCGCGGCGTTGTTAACAAAGTGGGGCGCCCCC ************************************************************ HS_haplotype1 TCTGAACTGCGTGCCGGCCGAGTGCCTGTCAATTTAAACCCCGATCTGCTACCCCCACCT HS_assemblymutate TCTGAACTGCGTGCCGGCCGAGTGCCTGTCAATTTAAACCCCGATCTGCTACCCCCACCT HS_haplotype2 TCTGAACTGCGTGCCGGCCGAGTGCCTGTCAATTTAAACCCCGATCTGCTACCCCCACCT ************************************************************ HS_haplotype1 CTCCAGGCAATCCCAGAGTTTAACTAAACATTCTAAAATTGGAGATGAACAGCAGAGTAG HS_assemblymutate CTCCAGGCAATCCCAGAGTTTAACTAAACATTCTAAAATTGGAGATGAACAGCAGAGTAG HS_haplotype2 CTCCAGGCAATCCCAGAGTTTAACTAAACATTCTAAAATTGGAGATGAACAGCAGAGTAG ************************************************************ HS_haplotype1 CCAGGGTATCCACCTTGCAGGCCCGGGAGCATAGGTTTTCATTAACCTCCCCAGTCCTAC HS_assemblymutate CCAGGGTATCCACCTTGCACCCCCGGGAGCATAGGTTTTCATTAACCTCCCCAGTCCTAC HS_haplotype2 CCAGGGTATCCATCTTGCACCCCCGGGAGCATAGGTTTTCATTAACCTCCCCAGTCCTAC ************ ****** *************************************** HS_haplotype1 CTTTCCTTTGCTAAGTTAGATATAGCAACCAGTGGCAAATAAATGCCGATTCTGTGACCA HS_assemblymutate CTTTCCTTTGCTAAGTTAGATATAGCAACCAGTGGCAAATAAATGCAAATTCTCTGACCA HS_haplotype2 CTTTCCTTTGCTAAGTTAGATATAGCAACCAGTGGCAAATAAATGCAAATTCTCTGACCA ********************************************** ***** ****** HS_haplotype1 CGCCCCGCCATCTGGGGAAAGGATCCCCAGCCGTTGGTTTTTGGGGGTCTCATGGCACGT HS_assemblymutate CGCCCCGCCATCTGGGGAAAGGATCCCCAGCCGTTGGTTTTTGGGGGTCTCATGGCACGT HS_haplotype2 CGCCCCGCCATCTGGGGAAAGGATCCCCAGCCGTTGGTTTTTGGGGGTCTAATGGCACGT ************************************************** ********* HS_haplotype1 GATAAAGTTGAATACCTTTTCATAGACAACTTATGTGGGGAACACAAGCTGATGGGCCTT HS_assemblymutate GATAAAGTTGAATACCTTTTCATAGACAACTTATGTGGGGAACACAAGCTGATGGGCCTT HS_haplotype2 GATAAAGTTGAATACCTTTTCATAGACAACTTATGTGGGGAACACAAGCTGATGGGGCTT ******************************************************** *** HS_haplotype1 CATAATGAAGTTGTTTAGGGGTGCGTGCCTCGGTTAAAGAAAATCGCTCAGGAGAACTTA HS_assemblymutate CATAATGAAGTTGTTTGGGGGTGCGTGCCTCGGTTAAAGAAAATCGCTCAGGAGAACTTA HS_haplotype2 CATAATGAAGTTGTTTGGGGGTGCGTGCCTCGGTTAAAGAAAATCGCTCAGGAGAACTTA **************** ******************************************* HS_haplotype1 TCTAAAGCCCCGCCCGTCTCCTAAAAAACCCTGGGAAGATCCTTTTTTGCAGCATAGTGT HS_assemblymutate TCTAAAGCCCCGCCCGTCTCCTAAAAAACCCTGGGAAGCTCCTTTTTTGCAGCATAGTGT HS_haplotype2 TCTAAAGCCCCGCCCGTCTCCTAAAAAACCCTGGGAAGCTCCTTTTTTGCAGCATAGTGT ************************************** ********************* HS_haplotype1 ATTCAATGTGATGACTGGGACTGTGAAATACAAGAGACCCAAAGCGAGCCACACAATTTA HS_assemblymutate ATTCAATGTGATGACTGGGACTGTGAAATACAAGAGACCCAAAGCGAGCCACACAATTTA HS_haplotype2 ATTCAATGTGATGACTGAGACTGTGAAATATAAGAGACCCAAAGCGAGCCACACAATTTA ***************** ************ ***************************** HS_haplotype1 ATGTTGTACATCGACGGGTGTGCTGAGGCCATGCACTCGTTTGAAGAATGCAGCAGCAAA HS_assemblymutate ATGTTGTACATCGACGGGTGTGCTGAGGCCATGCACTCGTTTGAAGAATGCAGCAGCAAA HS_haplotype2 ATGTTGTACATCGACGGGTGTGCTGAGGCCATGCAATCGTTTGAAGAATGCAGCAGCAAA *********************************** ************************ HS_haplotype1 CAAACCCTACTT---GAAAGTTACCTCATTATGTCTTATTGCTACAGCAAAAGCCAACGA HS_assemblymutate CAAACCCTACTTGGCGAAAGTTACCTCATTATGTCTTATTGCTACAGCAAAAGCCAACGA HS_haplotype2 CAAACCCTACTT---GAATGTTACCTCATTATGTGTTATTGCTACAGCAAAAGCCAACGA ************ *** *************** ************************* HS_haplotype1 CCGGCACCCCAACCGTGGCTTCATGCAGCTCTTGGCAGTGATGGGCAGGAGGCCAAACTC HS_assemblymutate CCGGCACCCCAACCGTGGCTTCATGCAGCTCTTGGCAGTGATGGGCAGGAGGCCAAACTC HS_haplotype2 CCGGCACCCCAACCTTGGCTTCATGCAGCTCTTGGCAGTGATGGGCAGGAGGCCAAACTC ************** ********************************************* HS_haplotype1 ACCATACAGAGGGATTAAACTGAAGAGTCTTAACAGGGAGTGAGTGGAGGTGAGGGGAGC HS_assemblymutate ACCATACAGAGGGATTAAACTGAAGAGTCTTAACAGGGAGTGAGTGGAGGTGAGGGGAGC HS_haplotype2 ACCATTCAGAGGGATTAAACTGAAGAGTCTTGACAGGGAGTGAGTGGAGGTGGGGGGAGC ***** ************************* ******************** ******* HS_haplotype1 CCAGCCATCAGTTTGATGACTTTTCCCTTATGACTGTTGCCCGGGCGGGTGGTCTGAAAC HS_assemblymutate CCAGCCATCAGTTTGATGACTTTTCCCTTATGACTGTTGGCCGGGCGGGTGATCTGAAAC HS_haplotype2 CCAGCTATCAGTTTGATGACTTTTCCCTTATGACTGTTGGCCGGGCGGGTGATCTGAAAC ***** ********************************* *********** ******** HS_haplotype1 CAAATTTGATTCTCAAACATGTGTCAGTAATTTAAAAGGAGGGACTTTACTGAGATGATT HS_assemblymutate CAAATTTGATTCTCAAACATGTGTCAGTAATTCAAAAGGAGGGACTTGACTGAGATGCTT HS_haplotype2 CAAATTTGATTCTCAAACATGTGTCAGTAATTCAAAAGGAGGGACTTGACTGAGATGCTT ******************************** ************** ********* ** HS_haplotype1 CAAACCCCGGGTGAGCATCATGCTGCACTCCAGGCAGTACCAATGTATTTCTGGCTTAAC HS_assemblymutate CAAACCCCGGGTGAGCATCATGCTGCACTCCAGGCAGTACCAATGTATTTCTGGCTTAAC HS_haplotype2 CAAACCCCGGGTGAGCATCATGCTGCACTCCAGGCAGTACCAATGTATTTCTGGCTTAAC ************************************************************ HS_haplotype1 TAGCCCCAGTGGTAGCGTGGGGCATTAACTAAGCACGAAAAACTGAATGTTATGGATGAT HS_assemblymutate TAGCCCCAGTGGTAGCGTGGGGCATTAACTAAGCACGAAAAACTGAATGTGATGGATGAT HS_haplotype2 TAGCCCCAGTGGTAGCGTGGGGCATTAACTAAGCACGAAAAACTGAATGTGATGGATGAT ************************************************** ********* HS_haplotype1 ATTTTGTTCAGCTGCCTTGCTGAGGCTGAAAATGATGGGGGGGGTGGAATAAAGCATTTC HS_assemblymutate ATTTTGTTCAGCTGCCTTGCTGAGGCTGAAAAGGATGGGGGGGGTGGAATAAAGCATTTC HS_haplotype2 ATTTTGTTCAGCTGCCTTGCTGAGGCTGAAAAGGATGGGGGGGGTGGAATAAAGCATTTC ******************************** *************************** HS_haplotype1 TCACTTGATAAAAACAGATCCCAGCGGGTGTATTA--AAATATAGTCCCCCTCCAGCTAG HS_assemblymutate TCACTTGATCAAAACAGATCCCAGCGGGTGTATTAAGAAATATAGTCCCCCTCCAGCTAG HS_haplotype2 TCACTTGATCAAAACAGATCCCAGCGGGTGTATTA--AAATATAGTCCCCCTCCAGCTAG ********* ************************* *********************** HS_haplotype1 AGGGTCAGTCTGTAAGCATTCCATAAAGAAAAGGCAGAGACAATTTCATTTTTCATGAGC HS_assemblymutate AGGGTCAGTCTGGAATCATGCCATAAAGAAAAGGCAGAGACAATTTCATTTTTCATGAGC HS_haplotype2 AGGGTCAGTCTGGAATCATGCCATAAAGAAAAGGCAGAGACAATTTCATTTTTCATGAGC ************ ** *** **************************************** HS_haplotype1 CCCAAACTAAATTGTATTCATCCCTCCTTTTTACAGCTACTGAAGGAAGGTACAGCAGCA HS_assemblymutate CCCATACTAAATTGTATTCATCCCTCCTTTTTACAGCTACTGAAGGAAGGTACAGCAGCA HS_haplotype2 CCCATACTAAATTGTATTCATCCCTCCTTTTTACAGCTACTGAAGGAAGGTACAGCAGCA **** ******************************************************* HS_haplotype1 TTAAAACCCCTTGGTTCATAGCATTTAAGAGTAGTACACAGGTCAAACAAAATTTTCCCA HS_assemblymutate TTAAAACCCCTTGGTTCATAGCATTTATGAGTAGTACACAGGTCAAACAAAATTTTCCCA HS_haplotype2 TTAAAACCCCTTGGTTCATAGCATTTATGAGTAGTACCCAGGTCAAACAAAATTTTCCCA *************************** ********* ********************** HS_haplotype1 AAAATATATGAGTGGGGGGTCAGACATTGCCTTCTGTAGTTAAGTGTAGGTAGCACGTAA HS_assemblymutate AAAATATATGAGTGGGGGGTCAGACATTGCCCTCTGTAGTTAAGTGTAGGTAGCACGTAA HS_haplotype2 AAAATATATGAGTGGGGGGTCAGACATTGCCCTCTGTAGTTAAGTGTAGGTAGCACGTAA ******************************* **************************** HS_haplotype1 GACTAAGTCTCCCTTTCCCTGATTTCAGATGAGACCATTTGAGTAGAGCCTGATTATCAA HS_assemblymutate GACTAAGTCTCCCTTTCCCTGCGTTCAGATGAGACCATTTGAGTAGAGCCTGATTATCTA HS_haplotype2 GACTAAGTCTCCCTTTCCCTGCGTTCAGATGAGACCATTTGAGTAGAGCCTGATTATCTA ********************* *********************************** * HS_haplotype1 TCATATCACGCAGCCTCCATGGGAGAGAGAGGCGCAGAATTTCCTCTTCACTGCAGCCTG HS_assemblymutate TCATATCACGCAGCCTCCATGGGAGAGAGAGGCGCAGAATTTCCTCTTCACTGCAGCCTG HS_haplotype2 TCATATCACGCAGCCTCCATGGGAGAGAGAGGCGCAGAATTTCCTCTTCACTGCAGCCTG ************************************************************ HS_haplotype1 CAGACAATCTAGAAGAGCATAAGTTGTGACATAGTAGAAAACACTTTATGGTGTGGCTGA HS_assemblymutate CAGACAATCTAGAAGAGCATAAGTTGTGACATAGTAGAAAACACTTTATGGTGTGGCTGA HS_haplotype2 CAGACAATCTAGAAGAGCATAAGTTGTGACATAGTAGAAAACACTTAATGGTGTGGCTGA ********************************************** ************* HS_haplotype1 TCATTCTATCAAGGACATATGATGTCACTGCCTCATTTGTAACTTATCTCCATAGTCTGG HS_assemblymutate TCATTCTATCAAGGACATATGATGTCACTGCCTCATTTGTAACTTATCTCCATAGTCTGG HS_haplotype2 TGATTGTCTCAAGGACATATGATGTCACTGCCGCATTTGTAACTTATCTCCATAGTCTGG * *** * ************************ *************************** HS_haplotype1 GCTACAGTCTCATCCTTAGCCCTTCTTCATCCTCCGCTAGACTCAAGCCCCTTTCTTCTT HS_assemblymutate GCTACAGTCTCATCCTTAGCCCTTCTTCATCCTCCGCTAGACTCAAGCCCCTTTCTTCTT HS_haplotype2 GCTACAGTCTCATCCTTAGCCCTTCTTCATCCTCCGCTAGACTCAAGCCCCTTTCTTCTT ************************************************************ HS_haplotype1 GTTTGGAGGGGCAAGCCAAGTGTCAGTCCCAGGAGGCATTGGAACAAGTATCCTTAAGTT HS_assemblymutate GTTTGGAGGGGCAAGCCAAGTGTCAGTCCCAGGAGGCATTGGAACAAGTATCCTTAAGTT HS_haplotype2 GTTTGGAGGGGCAAGCCAAGTGTCAGTCCCAGGAGGCATTGGAACAAGTATCCTTAAGTT ************************************************************ HS_haplotype1 TGGGACTGGTCAAAATTTTTTTTCTTTTTTCTGACCAAAATTTAGCATCATGAGGCAGGA HS_assemblymutate TGGGACTGGTCAAAATTTTTTTTCTTTTTTCTGACCAAAATTTAGCATCATGAGGCAGGA HS_haplotype2 TGGGACTGGTCAAAATTTTTTTTCTTTTTTCTGACCAAAATTTAGCATCATGAGGCAGGA ************************************************************ HS_haplotype1 GTAGCTAGCTTTTTGATAATGACTGACACAAGCTGAGACTCTGAGGCAGGCTGGGGATCA HS_assemblymutate GTAGCTAGCTTTTTGATAATGACTGACACAAGCTGAGACTCTGAGGCAGGGTGGGGATCA HS_haplotype2 GTAGCTAGCTTTTTGATAATGACTGACACAAGCTGAGACTCTGAGGCTGGGTGGGGATCA *********************************************** ** ********* HS_haplotype1 CATCTCCTCAGTGATGGTGGTAGGGCACCATCTAGATGGGGGTCGTGGTACACTGCTGGG HS_assemblymutate CATCTCCTCAGTGATGGTGGTAGGGCACCATCTAGATGGGGGTCGTGGTACACTGCTGGG HS_haplotype2 CATCTCCTCAGTGATGGTGGTAGGGCACCATCTAGATGGGGGTCGTGGTACACTGCTGGG ************************************************************ HS_haplotype1 GCCTTTCTGGAGTTCATAAAGATACTTGGCTCCGGGAGCTACTCCCAAAGACCATCCATA HS_assemblymutate GCCTTTCTGGAGTTCATAAAGATACTTGGCTCCGGGAGCTACTCCCAAAGACCATCCATA HS_haplotype2 GGCTTTCTGGAGTTCATAAAGATACTTGGCTCCGGGAGCTACTCCCAAAGACCATCCATA * ********************************************************** HS_haplotype1 ATTAAATTATTTCCTTTAAAATGCACCTGAGGTTCCTTTCTATAACGTGGCCCGCCCAGA HS_assemblymutate ATTAAATTATTTCCTTTAAAATGCACCTGAGGTTCCTTTCTATAACGAGGCCCGCCCAGA HS_haplotype2 ATTAAATTATTTCCTTTAAAATGCACCTGAGGTTCCTTTCTATAACGAGGCCCGCCCAGA *********************************************** ************ HS_haplotype1 AGTAACTCCTGAGCGGAGGTGAGGCCGGGCATAGGATGAACATTTTATCCCATTACAAAA HS_assemblymutate AGTAACTCCTGAGCGGAGGTGAGGCCGGGCATAGGATGAACATTTTATCCCATTACAAAA HS_haplotype2 AGTAACTCCTGAGCGGAGGTGAGGCCGGGCATAGGATGAACATTTTATCCCATTACAAAA ************************************************************ HS_haplotype1 GAAAAGTTGCTCTGTCAGATATGTGTGGGAAGTTACAACTGACATTTGAACTTGAAGAAG HS_assemblymutate GAAAAGTTGCTCTTTCAGATATGTGTGGGAAGTTACAACTGACATTTGAACTTGAAGAAG HS_haplotype2 GAAAAGTTGCTCTTTCAGATATGTGTGGGAAGTTACAACTGACATTTGAACTTGAAGAAG ************* ********************************************** HS_haplotype1 GAAGTCCCATCACTGATCTGGGAAAACAGTCAATGTTTGAGTAGAAGATAAAACTCAGAG HS_assemblymutate GAAATCCCGTCACTGATCTGGGAAAGCAGTCAATGTTTGAGTAGAAGATAAAACTCAGAG HS_haplotype2 GAAATCCCGTCACTGATCTGGGAAAGCAGTCAATGTTTGAGTAGAAGATAAAACTCAGAG *** **** **************** ********************************** HS_haplotype1 GTGCTAGGCACTAGTCTCTCTAGTTATAATCCCCCGAGGTAACAAACAAGGAGGGTAGGG HS_assemblymutate GTGCTAGGCACTAGTCTCTCTAGTTATAATCCCCCGAGGTTACAAACAAGGAGGGTAGGG HS_haplotype2 GTGCTAGGCACTAGTCTCTCTAGTTATAATCCCCCGAGGTTACAAACAAGGAGGGTAGGG **************************************** ******************* HS_haplotype1 CCGCCAAAGCTCCCCTGGTGCCGGATCATCAGTGATTTTGAAATACATGATCCTGACATT HS_assemblymutate CCGCCAAAGCTCCCCTGGTGCCGGATCATCAGGGATGTTGAAATACATGATCCTGACATT HS_haplotype2 CCGCCAAAGCTCCCCTGGTGCCGGATCATCAGGGATGTTGAAATACATGATCCTGACATT ******************************** *** *********************** HS_haplotype1 ATACCAATGCAAGATCATTGTTTTCTGTTACAATGAGTAGGCAGCTAATAGTGTGCTCAG HS_assemblymutate ATACCAATGCAAGATTATTGTTTTCTGTTACAATGAGTAGGCAGCTAATAGTGTGCTGAG HS_haplotype2 ATACCAATGCAAGATTATTGTTTTCTGTTACAATGAGTAGGCAGCTAATAGTGTGCTGAG *************** ***************************************** ** HS_haplotype1 GAGAGAAATCTGGGGGGATTGCTTGGTCTACTCCACCAGAAAGGAAACAAAAATCCTACA HS_assemblymutate GAGAGAAATCTGGGGGGATTGCTTGGTCTACTCCACCAGAAAGGAAACAAAAATCCTACA HS_haplotype2 GAGAGAAATCTGGGGGGATTGCTTGGTCTACTCCACCAGAAAGGAAACAAAAATCCTAGA ********************************************************** * HS_haplotype1 CAAAATTTTTGTTCCAGAGACAGACGAGTTTCAAAACTTGCCCTGGCATGGTTATGCTCC HS_assemblymutate CAAAATTTTTGTTCCAGAGACAGACGAGTTTCAAAAATTGCCCTGGCATGGTTATGCTCC HS_haplotype2 CAAAATTTTTGTTCCAGAGACAGACGAGTTTCAAAAATTGCCCTGGCATGGTGATGCTCC ************************************ *************** ******* HS_haplotype1 TGGGCGGCGCCCTCTGTCCTCCCCATCGCTAGCAATGTGCTGTGGGCCTATGGGGTCTCC HS_assemblymutate TGGGCGGCGCCATATGTCCTCCCCATCGCTAGCAATGTGCTGGGGGCCTATGGGGTCTCC HS_haplotype2 TGGGCGGCGCCATATGTCCTCCCCATCGCCAGCAATGTGCTGGGGGCCTATGGGGTCTCC *********** * *************** ************ ***************** HS_haplotype1 CTACCCACTTATTCAAAAGGTCAGGTTCTCGCCCAGGCGTGTTTCATCATTTGAAGGCAT HS_assemblymutate CTACCCTCTTATTCAAAAGGTCAGGTTCTCGCCCAGGCGTGTTTCATCATTTGAAGGCAT HS_haplotype2 CTACCCTCTTATTCAAAAGGTCAGGTTCTCGCCCAGGCGTGTTTCATCATTTGAAGGCAT ****** ***************************************************** HS_haplotype1 GGACCAGTGCCTCCAACAAAACAGTTTGTTATGGAGATAGAAAATAAAGAGTCTGGCCAG HS_assemblymutate GGACCAGTGCCTCCAACAAAACAGTTTGTTATGGAGATAGAAAATAAAGAGTCTGGCCAG HS_haplotype2 GGACCAGTGCCTCCAACAAAACAGTTTGTTATGGAGATAGAAAATAAAGAGTCTGGCCAG ************************************************************ HS_haplotype1 CAAGTCAAAGTATGCTCAGTACCAGAGCAGGAGGCGGGGGCCCACTTTTAGTGGACATTT HS_assemblymutate CAAGTCAAAGTATGCTCAGTACCAGAGCAGGAGGCGGGGGCCCACTTTTAGTGGACATTT HS_haplotype2 CAAGTCAAAGTATGCTCAGTACCAGAGCAGGAGGCGGGGGCCCACTTATAGTGGACATTT *********************************************** ************ HS_haplotype1 TCTTCAGCCAGGGGAAGAAATGCTGTGACGTCATGCTCAGTGGGTGACGGCCGAAGGCTA HS_assemblymutate TCTTCAGCCAGGGGAAGAAATGCTGTGACGTCATGCTCAGTGGGTGACGGCCGAAGGCTA HS_haplotype2 TCTTCAGCCAGGGGAAGAAATGCTGTGACGTCATGCTCAGTGGGTGGCAGCCGAAGGCTA ********************************************** * *********** HS_haplotype1 ATTAAATCTGCAACGGCCACCCTAATTTGAGCAAGTCATCTGCAAATAGTTCTGCTGGCA HS_assemblymutate ATTAAATCTGCAACGGCCACCCTAATTTGAGCAAGTCATCTGCAAATAGTTCTGCTGGCA HS_haplotype2 ATTAAATCTGCAACGGCCACCCTAATTTGAGCAAGTCATCTGCAAATAGTTCTGCTGGCA ************************************************************ HS_haplotype1 GAGCCCACCCAAAGCATCTGTTCTAAAGCACATCCGGGGCAGCTAATTCTAAAAAAAACT HS_assemblymutate GAGCCCACCCAAAGCATCTGTTCTAAAGCACATCCGGGGCAGCTAATTCTAAAAAAAACT HS_haplotype2 GAGCCCTCCCAAAGCATCTGTTCTAAAGCACATGCGGGGCGGCTAATTCTAAAAAAAACT ****** ************************** ****** ******************* HS_haplotype1 GGCTTGAAGACAGAGCAGCATCTCTCATGATGCCCAATCCCAATGGGTTTGGCTTACTGG HS_assemblymutate GGCTTGAAGACAGAGCAGCATCTCTCATGATGCCCAATCCCAATGGGTTTGGCTTACTGG HS_haplotype2 GGCTTGAAGACAGAGCAGCATCTCTGATGATGCCCAATCCCAATGGGTTTGGCTTACTGG ************************* ********************************** HS_haplotype1 CGAGAGGTATCTGATATGTTTCAGCTGGGACAGGGGTTTCCTTCAGTTACGTTTACTTAT HS_assemblymutate CGAGAGGTATCTGATATGTTTCAGCTGGGACAGGGGTTTCCTTCAGTTACGTTTACTTAT HS_haplotype2 CGAGAGGCATCTGATATGTTTCAGCTGGGACAGGGGTTTCCTTCAGTTACGTTTACTTAT ******* **************************************************** HS_haplotype1 GGCGCACCCACTGCTGTGGGTTTGAATGTGATCTGTAGAAGGTAAAGTGCTTTTAACATA HS_assemblymutate GGCGCACCCACTGCTGTGGGTTTGAATGTGATCTGTAGAAGGTAAAGTGCTTTTAACATA HS_haplotype2 GGCACACCCACTGCTGTGGGTTTGAATGTGATCTGTAGAAGGTAAAGTGCTTTTAACATA *** ******************************************************** HS_haplotype1 GCCCCTTGATATGCCCTCAACCTGGAGCAAGGGGGACTCCTTTTATAAGATAAACCACAA HS_assemblymutate GCCCCTTGATATGCCCTCAACCTGGAGCAAGGGGGACTCCTTTTATAAGATAAACCACAA HS_haplotype2 GCCCCTTGATATGCCCTCAACCTGGAGCAAGGGGGACTCCTTTTATAGGATAAACCACAA *********************************************** ************ HS_haplotype1 AATTCTTACAGATCTTCAGACTTGCATCACATGTGCCTCATGCCTCACCCAGACATATCC HS_assemblymutate AATTCTTACAGATCTTCAGACTTGCATCACATGTGCCTCATGCCTCACCCAGACATATCC HS_haplotype2 AATTCTTACAGATCTTCAGACTTGCACCACATGTGCATCATGCCTCACCCAGACATATCC ************************** ********* *********************** HS_haplotype1 TCCCCACTGAGGTATACAAGTACCCAATAGGTACAAAAAGATGCATGTATCCTCACTGGG HS_assemblymutate TCCCCACTGAGGTATACAAGTACCCAATAGGTACAAAAAGATGCAAGTTTCCTCACTGGG HS_haplotype2 TCCCCACTGAGGTATACAAGTACCCAATAGGTACAAAAAGATGCAAGTTTCCTCACTGGG ********************************************* ** *********** HS_haplotype1 AGGCTTCAAAGATCGACCTGACTCCGCCACATGGATATATGAGAAGAGCGAGACTGGCCT HS_assemblymutate AGGCTTCAAAGATCGACCTGACTCCGCCACATGGATATATGAGAAGAGCGAGACTGGCCT HS_haplotype2 AGGCTTCAAAGATCGACCTGACTCCGCCACATGGATATATGAGAAGAGCGAGACTGGCCT ************************************************************ HS_haplotype1 CACGGAGACATTAACAAACACCGCACCCAGATGATCTCATATTTTTGTCATTATGTAAAC HS_assemblymutate CACGGAGACATTAACAAACACCGCACCCAGATGATCTCATATTTTTGTCATTATGTAAAC HS_haplotype2 CCCGGAGACATTAACAAACACCGCACCCAGATGATCTCATATTTTTGTCATTATGTAAAC * ********************************************************** HS_haplotype1 GACCTCAATGCAGAATTCAGAGCTCCGGTGATGTTGAACGGCTCGAGATCAAGTCCACCA HS_assemblymutate GACCTCAATGCAGAATTCAGAGCTCCGGTGATGTTGAACGGCTCGAGATCAAGTCCGCCA HS_haplotype2 GACCTCAATGCAGAATTCAGAGCTCAGGTGATGTTGAACCGCTCGAGATCAAGTCCGCCA ************************* ************* **************** *** HS_haplotype1 GTCCGAACTTAAATCTGATAAATGTAGAGAATTCATCTTTTGTTTGAACGCTCTCCACCA HS_assemblymutate GTCCGAACTTAAATCTGATAAATGTAGAGAATTCATCTTTTGTTTGAACGCTCTCCACCA HS_haplotype2 GTCCGAACTTAAATCTGATAAATGTAGAGAATTCATCTTTTGTTTGAACGCTCTCCACCA ************************************************************ HS_haplotype1 GCCACCACAGCATGTGCTGTGTTGGGTAGGATAGGAAGCAGCGCAAGAACGGCCTGTCAA HS_assemblymutate GCCACCACAGCATGTGCTGTGTTGGGTAGGATAGGAAGCAGCGCAAGAAGGGCCTGTCAA HS_haplotype2 GCCACCACAGCATGTGCTGTGTTGGGTAGGATAGGAAGCAGCGCAAGAAGGGCCTGTCAA ************************************************* ********** HS_haplotype1 CCTGGAAATAGCAAAAAGAAATGTAATCATTACAGCAGTACATGGTTTCAGTCAGGAGAA HS_assemblymutate CCTGGAAATAGCAACAAGAAATGTAATCATTACAGCAGTACATGGTTTCAGTCAGGAGAA HS_haplotype2 CCTGGAAATAGCAACAAGAAATGTAATCATTACAGCAGTACATGGTTTCAGTCAGGAGAA ************** ********************************************* HS_haplotype1 ATTCTGTCTCTGGCCATGTCCCATGTCTCATCTCTGGAGACAGGGGGGTTTGTCATTAGA HS_assemblymutate ATTCTGTCTCTGGCCATGTCCCATGTCTCATCTCTGGAGACAGGGGGGTTTGTCATTAGA HS_haplotype2 ATTCTGTCTCTGGCCATGTCCCATGTCTCATCTCTGGAGACAGGGGGGTTTGTCATTAAA ********************************************************** * HS_haplotype1 AATTCCCAGGGGGAGCTCAATTTTGTAAAAACCTGGAACTTTTGAAACTAGCTGTAAATA HS_assemblymutate AATTCCCAGGGGGAGCTCAATTTTGTAAAAACCTGGAACTTTTGAAACTAGCTGTAAATA HS_haplotype2 AATTCCCAGGGGGAGCTCAATTTTGTAAAAACCTGGAACTTTTGAAACTAGCTGTAAATA ************************************************************ HS_haplotype1 TTCATAGCACATATTCATCATGACATAATCAAGATGCTTTGGGGTTGGGTTTGATCCCGG HS_assemblymutate TTCATAGCACATATTCATCATGACATAATCAAGATGCTTTGGGGTTGGGTTTGATCCCGG HS_haplotype2 TTCATAGCACATATTCATCATGACATAATCAAGATGCTTTGGGGTTGGGTTTGATCCCGG ************************************************************ HS_haplotype1 CCTTTTCATCCTGCCTGGGGAAGGTGGGGAGAATATGGGACCCCTCTGCATGGGGATCGC HS_assemblymutate CCTTTTCATCCTGCCTGGGGAAGGTGGGGAGAATATGGGACCCCTCTGCATGGGGATCGC HS_haplotype2 CCTTTCCATCCTGCCTGGAGAAGGTGGGGAGAATATGGGACCCCTCTGCATGGGGATCGC ***** ************ ***************************************** HS_haplotype1 TGATGTGCAATTTTAATAGAAGGGTTCATGACGAAATGTGTGCCTCAGTGCCGAGTGAGA HS_assemblymutate TGATGTGCAATTTTAATAAAAGGGTTCATGATGAGATGTGTGCCTCAGTGCCGAGTGAGA HS_haplotype2 TGATGTGCAATTTTAATAAAAGGGTTCATGATGAGATGTGTGCCTCAGTGCCGAGTGAGA ****************** ************ ** ************************* HS_haplotype1 ATTCATTTAACAGTCTTGGGGGGCAAAGCATTCTGCTGACTAGTGAAATTAACCTTCACG HS_assemblymutate ATTCATTTAACAGTCTTGGGGGGCAAAGCATTCTGCTGACTAGTGAAATTAACCTTCACG HS_haplotype2 ATTCATTTAACAGTCTTGGGGGGCAAAGCATTCTGCTGACTAGTGAAATTAACCTTCACG ************************************************************ HS_haplotype1 ACACCTGGGTCTTAGGAAGGAAGTGACGGGGAGCTTGCAGTATAATAATAAGTCTTTGGA HS_assemblymutate ACACCTGGGTCTTAGGAAGGAAGTGACGGGGAGCTTGCAGTATAATAATAAGTCTTTGGA HS_haplotype2 ACACCTGGGTCTTAGGAAGGAAGTGACGGGGAGCTCGCAGTATAATAATAAGTCGTTGGA *********************************** ****************** ***** HS_haplotype1 CATTTGACCAGGTATATATTTTAGTCTCGCTCGGGAACTCTGCAACCTCAGAGCTGCTCA HS_assemblymutate CATTTGACCAGGTATATATTTTAGTCTCGCTCGGGAACTCTGCAACCTCAGAGCTGCTCA HS_haplotype2 CATTTGACCAGGTATATATTTTAGTCTCGCTCGGGAACTCTGCAACCTCAGAGCTGCTCA ************************************************************ HS_haplotype1 TCATCCGCGGTTCTACTTCTTAAACTGCGGGGAGGCATTTATAGTTTTTCTGCACCTTCA HS_assemblymutate TCATCCGCGGTTCTACTTCTTAAACTGCGGGGAGGCATTTATAGTTTTTCTGCACCTTCA HS_haplotype2 TCATCCGCGGTTCTACTTCTTAAACTGCGGGGAGGCATTTATAGTTTTTCTGCACCTTCA ************************************************************ HS_haplotype1 ATGTGTGACCACGTTTCTGGTGGGATATGCAGCCAAGCAAAGTCAAGACAATAGAAAGTA HS_assemblymutate ATGTGTGACCACGTTTCTGGTGGGATATGCAGCCAAGCAAAGTCAAGACAATAGAAAGTA HS_haplotype2 ATGTGTGACCACGTTTCTGGTGGGATATGCAGCCAAGCAAAGTCAAGACAATAGAAAGTA ************************************************************ HS_haplotype1 ATTAAGAGCCTTGAAACAAAATGTAGATACATTGGAGAGGGGCTCACTGTGGATCTTCTG HS_assemblymutate ATTAAGAGCCTTGAAACAAAATGTAGATACATTGGAGAGGGGCTCACTGTGGATCTTCTG HS_haplotype2 ATTAAGAGCCTTGAAACAAAATGTAGATACATTGGAGAGGGGCTCACTGTGGATCTTCTG ************************************************************ HS_haplotype1 TGGAGATAAGTGTGTTTCAAAAATGAGCCTCTCTTAAATTAGAAAGAGTTATTGTTTTGA HS_assemblymutate TGGAGATAAGTGTGTTTCAAAAATGAGCCTCTCTTAAATTAGAAAGAGTTATTGTTTTGA HS_haplotype2 TGGAGATAAGTGTGTTTCAAAAATGAGCCTCTCTTAAATTAGAAAGAGTTATTGTTTTGA ************************************************************ HS_haplotype1 CCTACCTTCTCTCAGTAACCAGCCCCAGGCAGGTCTACAAGTACAGGTCAAATCCTTGAG HS_assemblymutate CCTACCTTCTCTCAGTAACCAGCCCCAGGCAGGTCTACAAGTACAGGTCAAATCCTTGAG HS_haplotype2 CCGGCCTTCTCTCAATAACCAGCCCCAGGCAGGTCTACAAGTACAGGTCAAATCCTTGAG ** ********** ********************************************* HS_haplotype1 CGAATACACTTTTTGTGACACACTGATTCAATAAAAAACTGAGATCACTAGGCATCATGT HS_assemblymutate CGAATACACTTTTTGTGACACACTGATTCAATAAAAAACTGAGATCACTAGGCATCATGT HS_haplotype2 CGAATACACTTTTTGTGACACACTGATTCAATAAAAAACTGGGATCACTAGGCATCATGT ***************************************** ****************** HS_haplotype1 AGAGGTAGTCAGGACTCACAGAGCTTCTACATGGTGAGAAGTGTCTGAAGAGCTCTGGAC HS_assemblymutate AGAGGTAGTCAGGACTCACAGAGCTTCTACATGGTGAGAAGTGTCTGAAGAGCTCTGGAC HS_haplotype2 GGAGGTAGTCACGACTGACAGAGCATCTACATGGTGAGAAGTGTCTGAAGAGCTCTGGAC ********** **** ******* *********************************** HS_haplotype1 TTGTCCTGTGCCCACCCAGAGCTGGGTTTCCAACCTCTCCCCCCCCAAAGGAGACTCTGG HS_assemblymutate TTGTCCTGTGCCCACCCAGAGCTGGGTTTCCAACCTCTCCCCCCCCAAAGGAGACTCTGG HS_haplotype2 TTGTCCTGTGCCCACCCAGAGCTGGGTTTACAACATCTCCCCCCCCAATGGAGACTCTGG ***************************** **** ************* *********** HS_haplotype1 GTGATTACAATAACTGGCCTACCCACCGAAAAAAAAGGGCCGAGTCAGGAGGTCTTGACA HS_assemblymutate GTGATTACAATAACTGGCCTACCCACCGAAAAAAAAGGGCCGAGTCAGGAGGTCTTGACA HS_haplotype2 GTGATTACAATAACTGGCCTACCCACCGAAAAAAAAGGGTCGAGTCAGGAGGTCTTGACA *************************************** ******************** HS_haplotype1 TGTTAGGCTTGTCCTGTTCACGAGGTGGGACTTGGCCTCCTGTAGGAACACATTCCAGAA HS_assemblymutate TGTTAGGCTTGTCCTGTTCACGAGGTGGGACTTGGCTTCCTGTAGGAACACATTCCAGAA HS_haplotype2 TGTTAGGCTTGTCCTGTTCACGAGGTGGGACTTGGCTTCCTGTAGGAACACATTCCAGAA ************************************ *********************** HS_haplotype1 AAGCGATCTGGGACGTGAAAAGAGGAGTTGAGTATGTCACTCACTCTTAGATCATTTCAG HS_assemblymutate AAGCGATCTGGGACGTGAAAAGAGGAGTTGAGTATGTCACTCACTCTTAGATCATTTCAG HS_haplotype2 AAGCGATCTGGGACGTGAAAAGAGGAGTTGAGTATGTCACTCACTCTTAGATCATTTCAG ************************************************************ HS_haplotype1 AGCTGCTGTGCAGGTGCAGTAAGAGGGTCTGCACTTTGTCTCCTTTTCGGTAGCTACTTT HS_assemblymutate AGCTGCTGTGCAGGTGCAGTAAGAGGGTCTGCACTTTGTCTCCTTTTCGGTAGCTACTTT HS_haplotype2 AGCTGCTGTGCAGGTGCAGTAAGAGGGTCTGCACTTTGTCTCCTTTTCGGTAGCTACTTT ************************************************************ HS_haplotype1 ACATTCAAGACCATCCCCCCTCGTCCGCCCGAGGCGCGTGTTCCCCTTTGTGAGCCCAAA HS_assemblymutate ACATTCAAGACCATCCCCCCTCGTCCGCCCGAGGCGCGTGTTCCCCTTTGTGAGCCCAAA HS_haplotype2 ACATTCAAGACCATCCCCCCTCGTCCGCCCGAGGCGCGTGTTCCCCTTTGTGAGCCCAGA ********************************************************** * HS_haplotype1 CACAAATTGATAAACTTCCCATTTAATATTAACTGCAGAACTGGGGATGCATCTATCCAC HS_assemblymutate CACAAATTGATAAACTTCCCATTTAATATTAACTGCACAACTGGGGATGCATCTATCCAC HS_haplotype2 CAGAAATTGATAAACTTCCCATTTAATATTAACTGCACAACTGGGGATGCATCTATCCAC ** ********************************** ********************** HS_haplotype1 CAGCCTGTAGTACAGGCGGCTCTACAAGGAACAGGAACAGCCCCAGGTCAGCTATTCTCT HS_assemblymutate CAGCCTGTAGTACAGGCGGCTCTACAAGGAACAGGAACAGCCCCAGGTCAGCTATTCTCT HS_haplotype2 CAGCCTGTAGTACAGGCGGCTCTACAAGGAACAGGAACAGCCCCAGGTCAGCTATTCTCT ************************************************************ HS_haplotype1 TCTGACTGAGACTCAGCCTGGGGAGGTCAGAACTCTCCTGCTTAAAACTTGTTTCCTTTT HS_assemblymutate TCTGACTGAGACTCAGCCTGGGGAGGTCAGAAGTCTCCTGCTTAAAACTTGTTTCCTTTT HS_haplotype2 TCTGACTGAGACTCAGCCTGGGGAGGTCAGAAGTCTCCTGCTTAAAACTTGTTTCCTTTT ******************************** *************************** HS_haplotype1 GCAGGAGCCATGTTGAGTTTCTAGAAGAACAGGGATTTAAGGAAAGGGAGGTCATGTCTG HS_assemblymutate GCAGGAGCCATGTTGAGTTTCTAGAAGAACAGGGATTTAAGGAAAGGGAGGTCATGTCTG HS_haplotype2 GCAGGAGCCATGTTGAGTTTCTAGAAGAACAGGGATTTAAGGAAAGGGAGGTCATGTCTG ************************************************************ HS_haplotype1 GCCTCCCAACAACAAAATTTAAGTAAAAGAAATAGCATAGATTACGTCACACTATTTAGG HS_assemblymutate GCCTCCCAACAACAAAATTTAAGTAAAAGAAATAGCATAGATTACGTCACACTTTTTAGG HS_haplotype2 GCCTCCCAAAAACAAAATTTAAGTAAAAGAAATAGCATAGATTACGTCACACTTTTTAGG ********* ******************************************* ****** HS_haplotype1 CGATTTTGGGATACCAAAATGGGGAGAATGTACAAATCTACTAAATTGTTTTTAATTAAA HS_assemblymutate CGATTTTGGGAGACCAAAATGGGGAGAATGTACAAATCTACTAAATTGTTTTTAATTAAA HS_haplotype2 CGATTTTGGGAGACCAAAATGGGGAGAATGTACAAATCTACTAAATTGTTTTTAATTAAA *********** ************************************************ HS_haplotype1 TAGTGAGTCCACCCCGTATCTGCCCGCAGCTCCGGTGAGGCAAGGCAAATAGGCCAGCCT HS_assemblymutate TAGTGAGTCCACCCCGTATCTGCCCGCAGCTCAGGTGAGGCAAGGCAAATAGGCCAGTCT HS_haplotype2 TAGTGAGTCCACCCCGTATCTGCCCGCAGCTCAGGTGAGGCAAGGCAAATAGGCCAGTCT ******************************** ************************ ** HS_haplotype1 GGGATTACTGGGGAGCAAGGGTCCAGGCATGCCAGGAGCAATAGACACACATGTGGGACT HS_assemblymutate GGGATTACTGGGGAGCAAGGGTCCAGGCATGCCAGGAGCAATAGACACACATGTGGGACT HS_haplotype2 GGGATTACTGGGGAGCAAGGGTCCAGGCATGCCAGGAGCAATAGACACACATGTGGGACT ************************************************************ HS_haplotype1 GAAGTCTTAACTTTGCAGTGGAATTCTCTGAAAAGATGTTTCTCAAGAATTGCTCAGGTT HS_assemblymutate GAAGTCTTAACTTTGCAGTGGAATTCTCTGAAAAGATGTTTCTCAAGAATTGCTCAGGTT HS_haplotype2 GAATTCATAACTTTGCAGTGGAATTCTCAGAAAAGATGTTTCTCAAGAATTGCTGAGGTT *** ** ********************* ************************* ***** HS_haplotype1 GGGCAAAAATTGCTTTTGCAGGGCTGGTGGGGACAAGTAGCCAAGGTCATGAAGAGGTCA HS_assemblymutate GGGCAAAAATTGCTTTTGCAGGGCTGGTGGGGACAAGTAGCCAAGGTCATGAAGAGGTCA HS_haplotype2 GGGCAAAAATTGCTTTTTCAGGGCTGGTGGGGACAAGTAGCCAAGGTCATGAAGAGGTCA ***************** ****************************************** HS_haplotype1 ATCTGTTATGATCTCATGTGTTCAATATTAAATAGAAAAGGTACTGTTTTGGCTTCCGTT HS_assemblymutate ATCTGTTATGATCTCATGTGTTCAACATTAAATAGAAAAGGTACTGTTTTGGCTTCAGTT HS_haplotype2 ATCTGTTATGATCTCATGTGTTCAACATTAAATAGAAAAGGTACTGTTTTGGCTTCAGTT ************************* ****************************** *** HS_haplotype1 TGAGGCCAGGCTAGGATGGCAGGAGAGTGAGGCGGCACAGAAGCCGAGGGAATTAGCCTT HS_assemblymutate TGAGGCCAGGCTAGGATGGCAGGAGAGTGAGGCGGGACAGAAGCCGAGGGAATTAGCCTT HS_haplotype2 TGAGGCCAGGCTAGGATGGCAGGAGAGTGAGGCGGGACAGAAGCCGAGGGAATTAGCCTT *********************************** ************************ HS_haplotype1 GTATGTTCAGCCTGAATGTTGACTCTGCATGCTTCTCCTCAGCCCTTTCTTCAGTCTCAC HS_assemblymutate GTATGTTCAGCCTGAATGTTGACTCTGCATGCTTCTCCTCAGCCCTTTCTTCAGTCTCAC HS_haplotype2 GTATGTTCAGCCTGAACGTTGACTCTGGATGCTTCTCCTCAGCCCTTTCTTCAGTCTCAC **************** ********** ******************************** HS_haplotype1 ACGGGGAGAGAGGGGAGGCAGGGTGTGGCTGAAACCCGGCCAGGAGTCCCTTCCTTCTGC HS_assemblymutate ACGGGGAGAGAGGGGAGGCAGGGTGTGGCTGAAACCCGGCCAGGAGTCCCTTCCTTCTGC HS_haplotype2 ACGGGGAGAGAGGGGAGGCAGGGTGTGGCTGAAACCCGGCCAGGAGTCCCTTCCTTCTGC ************************************************************ HS_haplotype1 TTTCCTCAGCCTGGGCACCACTGACTTATTTTGTCAAATAGGAAATAAAAAGCAAGGGAG HS_assemblymutate TTTCCTCCGCCTGGGCACCACTGACTTATTTTGTCAAATAGGAAATAAAAAGCAAGGGAG HS_haplotype2 TTTCCTCCGCCTGGGCACCACTGACTTATTTTGTCAAATAGGAAATAAAAAGCAAGGGAG ******* **************************************************** HS_haplotype1 TCAAGATCATCACTCCTGGCATGCCATACAAAAAAACAGCATCAAGATCTTGCAAGTTTA HS_assemblymutate TCAAGATCATCACTCCAGGCATGCCATACAAAAAAACAGCATCAAGATCTTGCAAGTTTA HS_haplotype2 TCAAGATCATCACTCCAGGCATGCCATACAAAAAAACAGCATCAAGATCTTGCAAGTTTA **************** ******************************************* HS_haplotype1 TGTCCATATTTGTGACTTGAAAGTGCTGCTGGCTCTAGTGGAAGCCAGCAAGTATATTAC HS_assemblymutate TGTCCATATTTGTGACTTGAAAGTGCTCCTGGCTCTAGTGTAAGCCAGCAAGTATATTAC HS_haplotype2 TGTCCCTATTTGTGACTTGAAAGTGCTCCTGGCTCTAGTGTAAGCCAGCAAGTATATTAC ***** ********************* ************ ******************* HS_haplotype1 TTCAGAGTCATTACAAGCAAGGTAGGAGTGCCACTGCTCCTGATTGCCCATCACTGCACT HS_assemblymutate TTCTGAGTCATTACAAGCAAGGGAGGAGTGCCACTACTCCTGATTGCCCATCACTGCACT HS_haplotype2 TTCTGAGTCATTACAAGCAAGGGAGGAGTGCCACTACTCCTGATTGCCCATCACTGCACT *** ****************** ************ ************************ HS_haplotype1 GTTTCTATGCAGGTGTTAAAAGGGATTTTAGCTGCCACATGCTGGGAGGCAGGCTGAGCC HS_assemblymutate GTTTCTAGGCAGGTGTTAAAAGGGATTTTAGCTGCCACATGCTGGGAGGCAGGCTGAGCC HS_haplotype2 GTTTCTAGGCAGGTGTTAAAAGGGATTTTAGCTGCCACATGCTGGGAGGCAGGCTGAGCC ******* **************************************************** HS_haplotype1 CAGCATCTATTCTCCATCTGGGCAAGGAATAGATAGAGGACACGTAATCTGGACGGTGGA HS_assemblymutate CAGCATCTATTCTCCATCTGGGCAAGGAATAGATAGAGGACACGTAATCTGGATGGTGGA HS_haplotype2 CAGCATCTATTCTCCATCTGGGCAAGGAATAGATAGAGGACACGTAATCTGGATGGTGGA ***************************************************** ****** HS_haplotype1 GGGGTTTTTTTCTTTTTGTTGCTCACGTGGTATAAATTTTACTTAGCCGGGCTCCTGACA HS_assemblymutate GGGGTTTTTTTCATTTTGTAGCTCACGTGGTATAAATTATACTTAGCCGGGCTCCTGACA HS_haplotype2 GGGGTTTTTTTCATTTTGTAGCTCACGTGGTATAAATTATACTTAGCCGGGCTCCTGACA ************ ****** ****************** ********************* HS_haplotype1 GGATTACCCAAATTCACCACCAGATTGCACTATCTATCATCTGAGGTTGCGCAGTTTGTG HS_assemblymutate GGATTACCCAAATTCACCACCAGATTGCACTATCTATCATCTGAGGTTGCGCAGTTTGTT HS_haplotype2 GGATTACCCAAATTCACCACCAGACTGCACTATCTATCATCTGAGGTTGCGCAGTTTGTT ************************ ********************************** HS_haplotype1 CAGTACCACCATAAGACTTCTCTGTCACGTTCCCGAGGCTGCTTCTGGGATCCATGCTAG HS_assemblymutate CAGTACCACCATAAGACTTCTCTGTCACGTTCCCGAGGCTGCTTCTGGGATCCATGCTAG HS_haplotype2 CAGTACCACCATAAGACTTCTCTGTCACGTTCCCGAGGCTGCTTCTGGGATCCATGCTAG ************************************************************ HS_haplotype1 GAGTTTGGGGCTTCTTATCTAACCTGCAATGAGCCAGAGAGAAGATTCAGAATGCCACTG HS_assemblymutate GAGTTTGGGGCTTCTTATCTAACCTGCAATGAGCCAGAGAGAAGATTCAGAATGCCACTG HS_haplotype2 GAGTTTGGGGCTTATTATCTAACCTGCAATGAGCCAGAGAGAAGATTCAGAATGCCACTG ************* ********************************************** HS_haplotype1 ACATTTTGAGGCTGAATCGCTTGTTCCATGAGCAGAGGCCACTTTTAGGCACCAGTAGAG HS_assemblymutate ACATTTTGAGGCAGAATCGCTTGTTCCATGAGCAGAGGCCACTTTTAGGCACCAGTAGAG HS_haplotype2 ACATTTTGAGGCAGAATCGCTTGTTCCATGAGCAGAGGCCACTTTTAGGCACCAGTAGAG ************ *********************************************** HS_haplotype1 AATGACCACCCACAACTCAAATTAGCCCTCATTTTAGTAGCTACTTAAAATTAATTTTAA HS_assemblymutate AATGACCACCCACAACTCAAATTAGCCCTCATTTTAGTAGCCACTTAAAATTAATTTTAA HS_haplotype2 AATGACCACCCACAAATCAAATTAGCCCTCATTTTAGTAGCCACTTAAAATTAATTTTAA *************** ************************* ****************** HS_haplotype1 CAGACTTCGACCCTCGGGTCTACTTCTTCGGTACCATCCCAAAATCCAGCACAATAGGTG HS_assemblymutate CAGACTTCGACCCTCGGGTCTACTTCTTCGGTACCATCCCAAAATCCAGCACAATAGGTG HS_haplotype2 CAGACTTCGACCCTCGGGTCTACTTCTTCGGTACCATCCCAAAATCCAGCACAAAAGGTG ****************************************************** ***** HS_haplotype1 TTTGATGTTTTCACCTGGCGTGGGCTCAAATCTTGCCAAGGGTTCAAGTGATTTGTTTCT HS_assemblymutate TTTGATGTTTTCACCTGGCGTGGGCTCAAATCTTGCCAAGGGTTCAAGTGATTTGTTTCT HS_haplotype2 TTTGATGTTTTCACCTGGCGTGGGCTCAAATCTTGCCAAGGGTTCAAGTGATTTGTTTCT ************************************************************ HS_haplotype1 AGCATGTGCAACGGACGTATTTTTAATATTCTCACGTATCAGGCCATTGGTTATCAGCGT HS_assemblymutate AGCATGTGCAACGGACGTATTTTTAATATTCTCACGTATCAGGCCATTGGTTATCAGCGT HS_haplotype2 AGCATGTGCAACGGACGTATTTTTAATATTCTCACGTATCAGGCCATTGGTTATCAGCGT ************************************************************ HS_haplotype1 TCTCAAAGGGTGGATTACTTCACACCACATCACTCCAGGCTGGTTTAATTTTTCTTGAGC HS_assemblymutate TCTCAAAGGGTGGATTACTTCACACCACATCACTCCAGGCTGGTTTAATTTTTCTTGAGC HS_haplotype2 TTTCAAAGGGTGGATTACTTCACACCACATCACTCCAGGCTGGTTCAATTTTTCTTGAGC * ******************************************* ************** HS_haplotype1 TGAGGATTATGGATTCTAATTTTAGACAGGCAGAAAAGAGATGTCACTGTAGAGAAGGAG HS_assemblymutate TGAGGATTATGGATTCTAATTTTAGACAGGCAGAAAAGAGATGTCACTGTAGAGAAGGAG HS_haplotype2 TGAGGATTATGGATTCTAATTTTAGACAGGCAGAAAAGAGATGTCACTGTAGAGAAGGAG ************************************************************ HS_haplotype1 TTTATTTTTGAAAGAACAGAGAGGCAGGCAGAAAAATCAAGATTGCCCTGGCAAGACAAG HS_assemblymutate TTTATTTTTGAAAGAACAGAGAGGCAGGCAGAAAAATCAAGATTGCCCTGGCAAGACAAG HS_haplotype2 TTTATTTTTGAAAGAACAGAGAGGCAGGCAGAAAAATCAAGATTGCCCTGGCAAGACAAG ************************************************************ HS_haplotype1 CGCACGAAACCATCTTATTTTTACACTCCAAAGCAGCGTTGTAGGTTGTGCATGTTTGGG HS_assemblymutate CGCACGAAACCATCTTATTTTTACACTCCAAAGCAGCGTTGTAGGTTGTGCATGTTTGGG HS_haplotype2 CGCACGAAACCATCTTATTTTTACACTCCAAAGCAGCGTTGTAGGTTCTGCATGTTTGGG *********************************************** ************ HS_haplotype1 TCTCGGTCGACACAGCAGTGATAGTAGAGACAAAAATCTCACTCTACAATGATGGCTCTG HS_assemblymutate TCTCGGTCGACACAGCAGTGATAGTAGAGACAAAAATCTCACTCTACAATGATGGCTCTG HS_haplotype2 TCTCGGTCGACACAGCAGTGATAGTAGAGACAACAATCTCACTCTACAATGATGGCTCTG ********************************* ************************** HS_haplotype1 TCTCTGTGGGATATACAAACATCACAGTGGGCCCCCATGTTTCTGAGGAAGATTATAACT HS_assemblymutate TCTCTGTGGGATCTACAAACATCACAGTGGGCCCCCATGTTTCTGAGGAAGATTATAACT HS_haplotype2 TCTCTGTGGGATCTACAAACATCACAGTGGGCCCCCATGTTTCTGAGGAAGATTATAACT ************ *********************************************** HS_haplotype1 GAAAAAAAAATTATGTACCTACTGACAGAGCCTGGGTTGCCTGAATTTGTTTTTAGGAGT HS_assemblymutate GAAAAAAAAATTATGTACCTACTGACAGAGCCTGGGTTGCCTGAATTTGTTTTTAGGAGT HS_haplotype2 GAAAAAAAAATTATGTACCTACTGACAGAGCCTGGGTTGCCTGAATTTGTTTTTAGGAGT ************************************************************ HS_haplotype1 TCATTAACCAAACCAGGCTGAAGTTATCCAGTCTGGGAGTGAGGCATTCAACAGCAAGAT HS_assemblymutate TCATTAACCAAACCAGGCTGCAGTTATCCAGTCTGGGAGTGAGGCATTCAACAGCAAGAT HS_haplotype2 TCATTAACCAAACCAGGCTGCAGTTATCCAGTCTGGGAGTGAGGCATTCAACAGCAAGAT ******************** *************************************** HS_haplotype1 GCATTGCTCCCTCCTGAGGCACCAGCAGGAGGAACTCCACCATGTCCTATGGTACTCTAA HS_assemblymutate GCATTGGTCCCTCCTGAGGCACCAGCAGGAGGAACTCCACCATGTCCTATGGTACTCTAA HS_haplotype2 GCATTGGTCGCTCCTGAGGCACCAGCAGGAGGAACTCCACCATGTCCTATCGTACTCTAA ****** ** **************************************** ********* HS_haplotype1 GACTGTGAAGCTCCCGGGGGAGGTTGCAGTATACCATTTGAAACGCTCCCGGGGCTGCCA HS_assemblymutate GACTGTGAAGCTCCCGGGGGAGGTTGCAGTATACCATTTGAAACGCTCCCGGGGCTGCCA HS_haplotype2 GACTGTGAAGCTCCCGGGGGAGGTTGCAGTATACCATTTGTAACGCTCCCAGGGCTGCCA **************************************** ********* ********* HS_haplotype1 GGTCTCTCTTGCTCGTGAAAAAGCAGGCATTGCTGCCGGGCGGAAGAGAGACTGGTGCTG HS_assemblymutate GGTCTCTCTTGCTCGTGAAAAAGCAGGCATTGCTGCCGGGCGGAAGAGAGACTGGTGCTG HS_haplotype2 GGTCGCTCTTGCTCCTGAAAAAGCAGGCATTGCTGCCGGGCGGAAGAGACACTGGTGCTG **** ********* ********************************** ********** HS_haplotype1 AGCCTCCATCTTGGCGATCTTAGTCCGGGCTCAGGAGTCAGATGGTGGCTAACCTCATTT HS_assemblymutate AGCCTCCATCTTCGCGATCTTATTCCGGGCTCAGGAGTCAGATGGTGGCTAACCTCATTT HS_haplotype2 ATCCTCCATCTTCGCGATCTTATTCCGGGCTCAGGAGTCAGATGGTGGCTAACCTCATTT * ********** ********* ************************************* HS_haplotype1 CCCCCATGGGAGGTCTAGACATCACTTCCTGGCTTTATTATTTTAGTAGAAAACACACCT HS_assemblymutate CCCCCATGGGAGGTCTAGACATCACTTCCTGGCTTTATTATTTTAGTAGAAAACACACCT HS_haplotype2 CCCCCATGGGAGGTCTAGACATCACTTCCTGGCTTTATTATTTTAGTAGAAAACACACCT ************************************************************ HS_haplotype1 TGCGTCTGAGTTCTTAGGTCGCCCGCCTGTGTGAAGCACTTTGTTTCTTCAAAGATTCGG HS_assemblymutate TGCGTCTGAGTTCTTAGGTCGCCCGCCTGTGTGAAGCACTTTGTTTCTTCAAAGATTCGG HS_haplotype2 TGCGTCTGAGTTCTTAGGTCGCCCGCCTGTGTGAAGCACTTTGTTTCTTCAAAGATTCGG ************************************************************ HS_haplotype1 TCAGGAGAAAGTCTACAGATGGTTTTATCATTGTTCATGCCTCACTTCCAGTCCCCTCCA HS_assemblymutate TCAGGAGAAAGTCTACAGATGGTTTTATCATTGTTCATGCCTCACTTCCAGTCCCCTCCA HS_haplotype2 TCAGGAGAAAGTCTACAGATGGTTTTATCATTGTTCATGCCTCACTTCGAGTCCCCTCCA ************************************************ *********** HS_haplotype1 TAAAATGACATGCACTTTGCTCACCGCCCAGCTACTAGTAGCAACCCAGCCCCAGGTTCA HS_assemblymutate TAAAATGAAATGCACTTTGCTCACCGCCCAGCTACTAGTAGCAACCCAGCCCCAGGTTCA HS_haplotype2 TAAAATGAAATGCACTTTGCTCACCGCCCAGCTACTAGTAGCAACCCAGCCCCAGGTTCA ******** *************************************************** HS_haplotype1 ACGGTCTCATTGTCTGCCACTGTTCACATATGTGGTCTCAGCCTTTCGTAGTCCCAAAAT HS_assemblymutate ACGGTCTCATTGTCTGCCACTGTTCACATCTGTGGTCTCAGCCTTTCGTAGTCCCAAAAT HS_haplotype2 ACGGTCTCATTGTCTGCCACTGTTCACATCTGTGGTCTCAGCCTTTCGTAGTCCCAAAAT ***************************** ****************************** HS_haplotype1 ACTTATTTAAACAGGAATTGGGCAACCCTACGCAACAACACCTGTGCAGCTTCAGATTAC HS_assemblymutate TCTTATTTAAACAGGAACTGGGCAACCCTACGCAACAACACCTCTGCAGCTTCAGATTAC HS_haplotype2 TCTTATTTAAACAGGAACTGGGCAACCCTACGCAACAACACCTCTGCAGCTTCAGATTAC **************** ************************* **************** HS_haplotype1 AGAAGCAAAAATATTATCCAAAGACCCGGCCACAGAGAAAATATCCAAGAGACGATGGCT HS_assemblymutate AGAAGCAAAAATATTATCCAAAGACCCGGCCACAGAGAAAATATCCAAGAGACGATGGCT HS_haplotype2 AGAAGCAAAAATATTATCCAAAGACCCGGCCACAGAGAAAATATCCAGGAGACGATGGCT *********************************************** ************ HS_haplotype1 CAGGTCAAATAAACAAATATACACGATTGCTCCACTCCTGCAGTCTCGGCCCTTTGCCGC HS_assemblymutate CAGGTCAAATAAACAAATATACACGATTGCTCCACTCCTGCAGTCTCAGCCCTTTGCCGC HS_haplotype2 CAGGTCAAATAAACAAATATACACAATTGCTCCACTCCTGCAGTCTCAGCCCTTTGCCGC ************************ ********************** ************ HS_haplotype1 AGCATCGTGTGGTTAATTTAGAACAGATGAACAGGCCACCTGGGGTTCTGTTACATAGTT HS_assemblymutate AGCATCGTGTGGTTAATTTAGAACAGATGAACAGGCCAGCTGGGGTTCTGTTACATAGTT HS_haplotype2 AGCATCGTGTGGTTAATTTAGAACAGATGAACAGGCCAGCTGGGGTTCTGTTACATAGTT ************************************** ********************* HS_haplotype1 TATGATTCTCACCCACTCACTGGTCCTTTTTTATAAACTAGAACACACCTACTCATCACA HS_assemblymutate TATGATTCTCACCCACTCACTGGTCCTTTTTTATAAACTAGAACACACCTACTCATCACA HS_haplotype2 TATGATTCTCACCCACTCACTGGTCCTTTTTTATAAACTAGAACACACCTACTCATCACA ************************************************************ HS_haplotype1 TCGTTTGAAATATCGAAAACACCCTTCTGGGCGGCACTCCTGTAGAGAAGAAAAAAATAA HS_assemblymutate TCGTTTGAAATATCGAAAACACCCTTCTGGGCGGCACTCCTGTAGAGAAGAAAAAAATAA HS_haplotype2 TCGTTTGAAATATCGAAAACACCCTTCTGGGCGGCACTCCTGTAGAGAAGAAAAAAATAA ************************************************************ HS_haplotype1 AGATCTCCTCCCAAAACAAACAACATACACTTCATTCATCAAGTCCAGTTTTTGGGGACT HS_assemblymutate AGATCTCCTCCCAAAACAAACAACATACACTTCATTCATCAAGTCCAGTTTTTGGGGACT HS_haplotype2 AGATCTCCTCCCAAAACAAACAACATACACTTCATTCATCAAGTCCAGTTTTTGGGGACT ************************************************************ HS_haplotype1 AAATTGGAGTTTATGTTACTATGAGGCATTTCTTCTTCCAGCGCCCCTAGAGTGGTGATC HS_assemblymutate AAATTGGAGTTTATGTTACTATGAGGCATTTCTTCTTCCAGCGCCCCTAGAGTGGTGATC HS_haplotype2 AAATTGGAGTTTATGTTACTATGAGGCATTTCTTCTTCCAGCGCCCCTAGAGTGGTGATC ************************************************************ HS_haplotype1 CACCCACGGACCTCTGGTGATCCATGTGGTCTAAGGCATATTCTATGGGTACATAGTGAA HS_assemblymutate CACCCACGGACCTCTGGTGATCCATGTGGTCTAAGGCATATTCTATGGGTACATAGTGAA HS_haplotype2 CACCCACGGACCTCTGGTGAACCATGTGGTCTAAGGCATAGTCTATGGGTACATAGTGAA ******************** ******************* ******************* HS_haplotype1 ATTCCAGCACTTCAGGTGGTGCGGCTTCTCAACTTGGGGGGAGAGGCGGGGGAGCGCTTG HS_assemblymutate ATTCCAGCACTTCAGGTGGTGCGGCTTCTCAACTTGGGGGGAGAGGCGGGGGAGCGCTTG HS_haplotype2 GTTCCAGCACTTCAGGTGGTGCGGCTTCTCAACTTGGGGGGAGAGGCGGGGGAGCGCTTG *********************************************************** HS_haplotype1 ATTACAGACATTTCCTTCATATTCAGGGGAGAGGTCGAGCCCTTGATTGGCGTGTCTACT HS_assemblymutate ATTACAGACATTTCCTTCATATTCAGGGGAGAGGTCGAGCCCTTGATTGGCGTGTCTACT HS_haplotype2 ATTACAGACATTTCCTTCATATTCAGGGGAGAGGTCGAGCCCTTGATTGGCGTGTCTACT ************************************************************ HS_haplotype1 TTAGGTCAGCAGTGGAAGAAGGTCGGCAGGAGTCTGCCCAGCATTAGCACTTTAAAAGGT HS_assemblymutate TTAGGTCAGCAGTGGAAGAAGGTCGGCAGGAGTCTGCCCAGCATTAGCACTTTAAAAGGT HS_haplotype2 TTAGGTCAGCAGTGGAAGAAGGTCGGCAGGAGTCTGCCCAGCATTAGCACTTTAAAAGGT ************************************************************ HS_haplotype1 AATATTTTTGTGCTGCCTGCCAGCTCAACCATCTGCTGAAGATCTCGGCTATTTGAACTA HS_assemblymutate AATATTTTTGTGCTGCCTGCCAGCTCAACCATCTGCTGGAGATCTCGGCTATTTGAACTA HS_haplotype2 AATATTTTTGTGCTGCCTGCCAGCTCAACCATCTGCTGGAGATCTCGGCTATTTGAACTA ************************************** ********************* HS_haplotype1 TATTGGGATGTCATTCTTTAGAACAGGTCTACTCCCTATTTTTGCATTGTCTAGACACCA HS_assemblymutate TATTGGGATGTCATTCTTTAGAACAGGTCTAGTCCCTATTTTTGCATTGTCTAGTCACCA HS_haplotype2 TATTGGGATGTCATTCTTTAGAACAGGTCTAGTCCCTATTTTTGCATTGTCTAGTCACCA ******************************* ********************** ***** HS_haplotype1 TTCTGGACCATGCTCCGAACGTGTGAAGGTTGCCCGTCTTCATAATTTCTGTTTACGGGC HS_assemblymutate TTCTGGACCATGATCCGAACGTGTGAAGGTTGCCCTTCTTCATAATTTCTGTTTACGGGC HS_haplotype2 TTCTGGACCATGATCCGAACGTGTGAAGGTTGCCCTTCTTCATAATTTCTGTTTACGGGC ************ ********************** ************************ HS_haplotype1 TCTCCTGCTGGGTGGCTTTCTCCCGGTCAGGTGAGGCGTTTACTTGCTAGGTATCGTGCG HS_assemblymutate TCTCCTGCTGGGTGGCTTTCTCCCGGTCAGGTGAGGCGTTTACTTGCTAGGTATCGTGCG HS_haplotype2 TCTCCTGCTGGGTGGCTTTCTCCCGGTCAGGTGAGGCGTTTACTTGCTAGGTATCGTGCG ************************************************************ HS_haplotype1 CCATCTTTTCTCACTTGATGTATTTATTATTAGCCCTAACTCTGTGTAAACACCTTTAGG HS_assemblymutate CCATCTTTTCTCACTTGATGTATTTATTATTAGCCCTAACTCTGTGTAAACACCTTTAGG HS_haplotype2 CCATCTTTTCTCACTTGATGTATTTATTATTAGCCCTAACTCTGTGTAAACACCTTTAGG ************************************************************ HS_haplotype1 ACGAGCAGGAGCAAGCCTCCTCAGGCTTGCGTCTATAGTATATGTCGCAGAGAGAGGGCA HS_assemblymutate ACGAGCAGGAGCAAGCCTCCTCAGGCTTGCTTCTATAGTATATGTCGCAGAGAGAGGGCA HS_haplotype2 ACGAGCAGGAACAAGCCTCCTCAGGCTTGCTTCTATAGTATATGTCGCAGAGAGAGGGCA ********** ******************* ***************************** HS_haplotype1 TGTTGAGACCATTACACGAACCCTCTTGATAAATAGACAAGGAAACTGCCCGGGGTCTCT HS_assemblymutate TGTTGAGACCATTACACGAACCCTCTTGATAAATAGACAAGGAAACTGCCCGGGGTCTCA HS_haplotype2 TGTTGAGACCATTACACGAACCCTCTTGATAAATAGACAAGGAAACTGCCCGGGGTCTCA *********************************************************** HS_haplotype1 GATGATCTAGTAGCTGACCTCGGAGCAAAGGGGTTTAAAATTGGTAGGGTAGTAATTGCT HS_assemblymutate GATGATCTAGTAGCTGACCTCGGAGCAAAGGGGTTTAAAATTGGTAGGGTAGTAATTGCT HS_haplotype2 GATGATCTAGTAGCTGACCTCGGAGCAAAGGGGTTTAAAATTGGTAGGGTAGTAATTGCT ************************************************************ HS_haplotype1 GGGAATATGTTGGCTTGTAGACAAGAGGCCCAAAGGAACATTCCACCTCGTGATAACTTC HS_assemblymutate GGGAATATGTTGGCTTGTAGACAAGAGGCCCAAAGGAATATTCCACCTCGTGATAACTCC HS_haplotype2 GGGAATATGTTGGCTTGTAGACAAGAGGCCCAAAGGAATATTCCACCTCGTGATAACTCC ************************************** ******************* * HS_haplotype1 AGGCTGGATCCTTTCCCGCCCCTCCAAAAACATTAGAACGATGCTGTAATCTTGTTAGCT HS_assemblymutate AGGCTGGATCCTTTCCCGCCCCTCCAAAAACATTAGAACGATACTGTAATCTTGTTAGCT HS_haplotype2 AGGCTGGATCCTTTCCCGCCCCTCCAAAAACATTAGAACGATACTGTAATCTTGTTAGCT ****************************************** ***************** HS_haplotype1 GGAAAGAGGCACTTTCCCTTTTAAGCACAGGCTCATTTTCGCGGTGGAGCGAAACCTTGG HS_assemblymutate GGAAAGAGGCACTTTCCCTTTTAAGCACAGGCTCATTTTCGCGGAGGAGCGAATCCTTGG HS_haplotype2 GGAAAGAGGCACTTTCCCTTTTAAGCACAGGCTCATTTTCGCGGAGGAGCGAATCCTTGG ******************************************** ******** ****** HS_haplotype1 CCACCAGTGGATTACCGACTGAAGCTCGGCCAGTGGATTCACTAGCCCCCTGCTCTTGGC HS_assemblymutate CCACCAGTGGATTACCGACTGAAGCTCGGCCAGTGGATTCACTAGCCCCCTGCTCTTGGC HS_haplotype2 CCACCAGTGGATTACCGACTGAAGCTCGGCCAGAGGATTCACTCGCCCCCTGCTCTTGGC ********************************* ********* **************** HS_haplotype1 CTCCCAGGCGGGAGGCAGCAGCATAAGAAAGGTTGAATAACAGAGCCATACCGCAAATCT HS_assemblymutate CTCCCAGGCGGGAGGCAGCAGCATAAGAAAGGTTGAATAACAGAGCCATACCGCAAATCT HS_haplotype2 CTCCCAGGCGGGAGGCAGCAGCATAAGAAAGGTTGAATAACAGAGCCATACCGCAAATCT ************************************************************ HS_haplotype1 CTTAACAACATCTTTAGCAGTCTCTGAAGCTGGCCACTGCGACGGATGAACAAAAAAAGC HS_assemblymutate CTTAACAACATCTTTAGCAGTCTCTGAAGCTGGCCACTGCGACGGATGAACAAAAAAAGC HS_haplotype2 TTTAACAACATCTTTAGCAGTCTCTGAAGCTGGCCACTGCGACGGGTGAACAAAAAAAGC ******************************************** ************** HS_haplotype1 AATGAATCCTTTCTTCTACTCCTGCCCATGGCTGTTTCGTCGTGCCAAAAAAAACGTGTG HS_assemblymutate AATGAATCCTTTCTTCTACTCCTGCCCATGGCTGTTTCGTCGTGCCAAAAAAAACGTGTG HS_haplotype2 AATGAATCCTTTCTTCTACTCCTGCCCATGGCTGTTTCGTCGTGCCAAAAAAAACGTGTG ************************************************************ HS_haplotype1 CACAGTAGAAAACTAGCCAACAGAAAATGCAGCAGTGGGATTACATATGTGTCCGGGGAA HS_assemblymutate CACAGTAGAAAACTAGCCAACAGAAAATGCAGCAGTGGGATTACATATGTGTCCGGGGAA HS_haplotype2 CACAGTAGAAAACTAGCCAACAGAAAATGCAGCAGTGGGATTACATATGTGTCCGGGGAA ************************************************************ HS_haplotype1 GGCACAAACTTAACAATTTCTGTCCACTCACTCTCTCTCATGAAAATTCAAAATTGAACC HS_assemblymutate GGCACAAACTTAACAATTTCTGTCCACTCACTCTCTCTCATGAAAATTCAAAATTGAACC HS_haplotype2 GGCACAAACTTAACAATTTCTGTCCACTCACTCTCTCTCATGAAAATTCAAAATTGAACC ************************************************************ HS_haplotype1 CTGCAAGCTAGAGTGTGGCTCTTGTAGAAGAGGGCTCTTCCACAGCATGGGCTTCCTTCC HS_assemblymutate CTGCCAGCTAGAGTGTGGCTCTTGTAGAAGAGGGCTCTTCCACAGCATGGGCTTCCTTCC HS_haplotype2 CTGCCAGCTAGAGTGAGGCTCTTGTAGAAGAGGGCTCTTCCACAGCATGGGCTTCCTTCC **** ********** ******************************************** HS_haplotype1 TAGATCGAACTGCCTAGCTGAATGGTTTGCTCTGCAACGAAAACTAAATGCTTTCTCCTA HS_assemblymutate TAGATCGAACTGCCTAGCTGAATGGTTTGCTCTGCAACGAAAACTAAATGCTTTCTCCTA HS_haplotype2 TAGATCGAACTGCCTAGCTGAATGGTTTGCTCTGCAACGATAACTAAATGCTTTCTCCTA **************************************** ******************* HS_haplotype1 TGGAAGAATGTACTGGCCAGGAACTACATAGCTGTTTTAAGAAATGTGAGCACTGGTAGA HS_assemblymutate TGGAAGAATGTACTGGCCAGGAACTACATAGCTGTTTTAAGAAATGTGAGCACTGGTAGA HS_haplotype2 TGGAAGAATGTACTGGCCAGGAACTACATAGCTGTTTTAAGAAATGTGAGCACTGGTAGA ************************************************************ HS_haplotype1 CATGTCAGGTAGTGAGGCTAAAAAATAAATAGTGTAGGATTATTAAATGACTCCAGAAGA HS_assemblymutate CATGTCAGGTAGTGAGGCTAAAAAATAAATAGTGTAGGATTATTAAATGACTCCAGAAGA HS_haplotype2 CATGTCAGGTAGTGAGGCTAAAAAATAAATAGTGTAGGATTATTAAATGACTCCAGAAGA ************************************************************ HS_haplotype1 CCTCAAAGTCACCCTTCCACTCCATGTAGATTTCTCATGGTGGCTAAGGTAAGCCCAGAG HS_assemblymutate CCTCAAAGTCACCTTTCCACTCCATGTAGATTTCTCATGGTGGCTAAGGTAAGCCCAGAG HS_haplotype2 CCTCAAAGTCACCTTTCCACTCCATGTAGATTTCTCATGGTGGCCAAGGTAACCCCAGAG ************* ****************************** ******* ******* HS_haplotype1 GGCACCACCTCCGAAGATCCCGGGCTGTTTAGTCAGAATTCTCTGCCTCAGAATGTATAC HS_assemblymutate GGCACCACCTCCGAAGATCCCGGGCTGTTTAGTCAGAATTCTCTGCCTCAGAATGTATAC HS_haplotype2 GGCACCACCTCCGAAGATCCCGGGCTGTTTAGTCAGAATTCTCTGCCTCAGAATGTATAC ************************************************************ HS_haplotype1 TAACTGGAACTTCTATGGACTGTTTCCGAGGCATTTTATTAGTCTGAGCCTGGACAAGAC HS_assemblymutate TAACTGGAACTTCTATGGACTGTTTCCGAGGCATTTTATTAGTCTGAGCCTGGCCAAGAC HS_haplotype2 TAACTGGAACTTCTATGGACTGTTTCCGAGGCATTTTATTAGTCTGAGCCTGGCCAAGAC ***************************************************** ****** HS_haplotype1 CCTCTACTCAGCCACGTGGAAATTAAGAGCCAGTGCAGCCCAACTCTATAAGAGGATTAT HS_assemblymutate CCTCTACTCAGCCACGTGGAAATTAAGAGCCAGTGCAGCCCAACTCTATAAGAGGATTAT HS_haplotype2 CCTCTACTCAGCCACGTGGAAATTAAGAGCCAGTGGAGCCCAACTCTATAAGAGGATTAT *********************************** ************************ HS_haplotype1 ATTTCTAGCTGGCTTCCTTCCTGGGGGCACTATTGTACCTCAGGAGTTAATACACTCTCC HS_assemblymutate ATTTCTAGCTGGCTTCCTTCCTGGGGGCACTATTGTACCTCAGGAGTTAATACACTCTCC HS_haplotype2 ATTTCTAGCTGGCTTCCTTCCTGGGGGCACTATTGTACCTCAGGAGTTAATACACTCTCC ************************************************************ HS_haplotype1 CAGGGTTTACAGGTTTGTCTGGGTGCGGTTTCTGCTGATAGATTCAAGTCAGGAGACCAA HS_assemblymutate CAGGGTTTACAGGTTTGTCTGGGTGCGGTTTCTGCTGATAGATTCAAGTCAGGAGACCAA HS_haplotype2 CAGGGTTTACAGGTTTGTCTGGGTGCGGTTTCTGCTGATAGATTCAAGTCAGGAGACCAA ************************************************************ HS_haplotype1 CAGGTGAAGCCTCTTCCCCAGCTTCGGCCTAAATTGTTGGTACAACAGATTCCTCCGCGG HS_assemblymutate CGGGTGAAGCCTCTTCCCCAGCTTCGGCCTCAATTGTTGGTACAACAGATTCCTCCGCGG HS_haplotype2 CGGGTGAAGCCTCTTCCCCAGCTTCGGCCTCAATTGTTGGTACAACAGATTCCTCCGCGG * **************************** ***************************** HS_haplotype1 GAAAAATTGTGCAGAGAAATAACATTTGCGGTGTAATTTTCAGTAAACATACGATCTAAT HS_assemblymutate GAAAAATTGTGCAGAGAAATAACATTTGCGGTGTAATTTTCAGTAAACATACGATCTAAT HS_haplotype2 GAAAAATTGTGCAGAGAAATAACATTTGCGGTGTAATTTTCAGTAAACATACAATCTAAT **************************************************** ******* HS_haplotype1 TCCTGTAGCCCCCCTTGAGGGGTAACATGGTGACTTCTGACAGCTCACACAAACTCCAAA HS_assemblymutate TCCTGTAGCCCCCCTTGAGGGGTAACATGGTGACTTCTGATAGCTCACACAAACTACAAA HS_haplotype2 TCCTGTAGCCCCCCTTGAGGGGTAACATGGTGACTTCTGATAGCTCACACAAACTACAAA **************************************** ************** **** HS_haplotype1 GCTGGCACCTAGATAGAAGCATATCATCCATTAAGACCACAGGGAATAGTATCTCAAGCC HS_assemblymutate GCTGGCACCTAGATAGAAGCATATCATCCATTAAGACCACAGTGAATAGTATCTCAAGCC HS_haplotype2 GCTGGCACCTAGATAGAAGCATATCATCCATTAAGACCACAGTGAATAGTATCTCAAGCC ****************************************** ***************** HS_haplotype1 ACGACCCACAAAGCTTGGCACTTTTCTCGGTAAATTTTTGTCCCAGAGCTCAACATTTGA HS_assemblymutate ACCACCCACAAAGCTTGGCACTTTTCTCGGTAAATTTTTGTCCCAGAGCTCAACATTTGA HS_haplotype2 ACCACCCACAAAGCTTGGCACTTTTCTCGGTAAATTTTTGTCCCAGAGCTCAACATTTGA ** ********************************************************* HS_haplotype1 GAACAGATCAGTATTTAATGCATGACCTGGAGCCGAGGCAACATGGGCCGGGGTCTGGGC HS_assemblymutate GAACAGATCAGTATTTAATGCATGACCTGGAGCCGAGGCAACATGGGCCGGGGTCTGGGC HS_haplotype2 GAACAGATCAGTATTTAATGCATGACCTGGAGCCGAGGCAACATGGGCCGGGGTCTGGGC ************************************************************ HS_haplotype1 TGGTACGAAAGAGTCAAATTCTTCTTTTGGCCGCCGCACCTAGAATCAGCAAAGTGTACA HS_assemblymutate TGGTACGAAAGAGTCAAATTCTTATCTTGGCCGCCGCACCTAGAATCAGCAAAGTGTACA HS_haplotype2 TGGTACGAAAGAGTCAAATTCTTATCTTGGCCGCCGCACCTAGAATCAGCAAAGTGTACA *********************** * ********************************** HS_haplotype1 GTGAGCCCGTTATTGTTTAGCACAGAGATACAATATACCAATTTCTGCATTTTATTACAG HS_assemblymutate GTGAGCCCATTATTGTTTAGCACAGAGATACAATATACCAATTTCTGCATTTTATTACAG HS_haplotype2 GTGAGCCCATTATTGTTTAGCACAGAGATACAATATACCCATTTCTGCATTTTATTACAG ******** ****************************** ******************** HS_haplotype1 CTCATACCCACTTTAGTATGGAAACTCCTAGGAGTTTCAACTCTCATAGTACTCATAGAG HS_assemblymutate CACATACCCACTTTAGTATGGAAACTCCTAGGAGTTTCAACTCTCATAGTACTCATAGAG HS_haplotype2 CACATACCCACTTTAGTATGGAAACTCCTAGGAGTTTCAACTTTCATAGTACTCATAGAG * **************************************** ***************** HS_haplotype1 GACAAGTATCTCCCTGCAAAGAAAAAATTCACCCTTGCAACTCGGAACATGATAACCTGA HS_assemblymutate GACAAGTATCTCCCTGCAAAGAAAAAATTCACCCTTGCAACTCGGAACATGATAACCTGA HS_haplotype2 GACAAGTATCTCCCTGCAAAGAAAAAATTCACTCTTGAAACTCGGAACATGATAACCTGA ******************************** **** ********************** HS_haplotype1 AAAGGATCCGATGAGGAGGGAGCACCCAGCTAGAAATAATAGATGCATGGGGTGCCTTGT HS_assemblymutate AAAGGATCCGATGAGGAGGGAGCACCCAGCTAGAAATAATAGATGCATGGGGTGCCTTGT HS_haplotype2 AAAGGATCCGATGGGGAGGGAGCTCCCAGCTATAAATAATAGATGCATGGGGTGCCTTGT ************* ********* ******** *************************** HS_haplotype1 TGGAATATTCAGAGCCTAGGAAGGATGTCTGGGATTGGGGGTTGGTCTCGAAGGAGACCA HS_assemblymutate TGGAATATTCAGAGCCTAGGAAGGATGTCTGGGATTGGGGGTTGGTCTCGAAGGAGACCA HS_haplotype2 TGGAATATTCAGAGCCTAGGAAGGATGTCTGGGATTGGGGGTTGGTCTCGAAGGAGACCA ************************************************************ HS_haplotype1 GCTGGATTTTTCCGGGTCTTCTTGGACCAGCCCCAAATACATTGGATTTTAATAAATGTC HS_assemblymutate GCTGGATTTTTCCGGGTCTTCTTGGACCAGCCCCAAATACATTGGATTTTAATAAATGTC HS_haplotype2 GCTGGATTTTTCCGGGTCTTCTTCGACCAGCCCCAAATACATTGGATTTTAATAAATGTC *********************** ************************************ HS_haplotype1 ATGCCCAGCAGAGTTTATTCTCAGTAACATCCGTGCAGCAAAGCAGGACCCAGGGATATA HS_assemblymutate ATGCCCAGCAGAGTTTATTCTCAGTAACATCCGTGCAGCAAAGCAGGACCCAGGGATATA HS_haplotype2 ATGTCCAGCAGAGTTTATTCTCCGTAACATCCGTGCAGCAAAGCAGGACCCAGGGATATA *** ****************** ************************************* HS_haplotype1 TCTGTTTTTGATTGCATCGTCTTGAGGATCAGAATTGTTAAAATCCCCAAATAAAATTCT HS_assemblymutate TCTGTTTTTGATTGCATCGTCTTGAGGATCAGAATTGTTAAAATCCCCAAATAAAATTCT HS_haplotype2 TCTGTTTTTGATTGCATGGTCTTGAGGATCAGAATTGTTAAAATCCCCAAATAAAATTTT ***************** **************************************** * HS_haplotype1 ACCATGGGCTGAGACACAGTTTTTAGGCAGTGCAGAGGTGGATGGTGTTTACCCAAAAGA HS_assemblymutate ACCATGGGCTGAGACACAGTTTTTAGGCAGTGCAGAGGTGGATGGTGTTTACCCAAAAGA HS_haplotype2 ACCATGGGCTGAGACACAGTTTTTAGGCAGTGCAGAGGCGGATGGTGTTTACCCAAAAGA ************************************** ********************* HS_haplotype1 AAATAATGTACATGCAAACTTTAAAACACCAGATGTGAGCCCCCTTTGTTGATTCACCTC HS_assemblymutate AAATAATGTACATGCAAACTTTAAAACACCACATGTGAGCCCCCTTTGTTGATTCACCTC HS_haplotype2 AAATAATGTACATGCAAACTTTAAAACACCACATGTGAGCCCCCTTTGTTGATTCACCTC ******************************* **************************** HS_haplotype1 AAATTAATATCAGAGAGTGGGAGCACTCCCGGATTTTTACCTAATTATGTTGCTTACAGG HS_assemblymutate AAATTAACCTCAGAGAGTGGCAGCACTCCAGGATTTTTACCTATTTATGTTGCTTACAGG HS_haplotype2 AAATTAACCTCAGAGAGTGGCAGCACTCCAGGATTTTTACCTATTTATGTTGCTTACAGG ******* *********** ******** ************* **************** HS_haplotype1 GCAAAGAATTAATCAAC------TGCTGTTGACATGGGTAAGTAGAGCCTCCTTCTAAGC HS_assemblymutate GCAAAGAATATATCAACTACATGTGCTGTTGACATGGGTAAGTAGAGCCTCCTTCTAAGC HS_haplotype2 GCAAAGAATATATCAAC------TGCTGTTGACATGGGTAAGTAGAGCCTCCTTCTAAGC ********* ****** ************************************* HS_haplotype1 ATCTGACTGTTTAATCTTGTGAAATGTAGTCCAGCAAAAGGGCTCAAATACCATGCATAC HS_assemblymutate AGCTGGCTGTTTAATCTAGTGAAATGTAGTCCAGCAGAAGGGCTCAAATACCATGCATAC HS_haplotype2 AGCTGGCTGTTTAATCTAGTGAAATGTAGTCCAGCAGAAGGGCTCAAATACCATGCATAC * *** *********** ****************** *********************** HS_haplotype1 TCGTCATAAGCAGCAGCTGGGACATAGCCTTAATTATAGTCACCCCAGCTAAATTAGAAG HS_assemblymutate TCGTCATAAGCAGCAGCTGGGACATAGCCTTCATTATAGTCACCCCAGCTAAATTAGAAG HS_haplotype2 TCGTCATAAGCAGCAGCTGGGACATAGCCTTCATTATAGTCACCCCAGCTAAATTAGAAG ******************************* **************************** HS_haplotype1 AATTAGGAGTCAGATGGTTGACTCTTCAATAATTTATTTCCTGAATATACGTGAGGTTGA HS_assemblymutate AATTAGGAGTCAGATGGTTGACTCTTCAATACTTTATTTCCTGAATATACGTGAGGTTGA HS_haplotype2 AATTAGGAGTCAGATGGTTGACTCTTCAATACTTTATTTCCTGAATATACGTGAGGTTGA ******************************* **************************** HS_haplotype1 GCTGGACCAGTTGTGGGTTGAGAGGTTTTTGCACCCAGCCATCTAACAACTGCACAGAAC HS_assemblymutate GCTGGACCAGTTGTGGGTTGAGAGGTTTTTGCACCCAGCCATCTAACAACTGCACAGAAC HS_haplotype2 GCTGGACCAGTTGTGGGTTGAGAGGTTTTTGCACCCAGCCATCTAACAACTGCACAGAAC ************************************************************ HS_haplotype1 CCATCATAAGCACTGTGAAGTGAGGTGCAGCTACTAGGGGGTTTCTTTTGCTGCTATGGC HS_assemblymutate CCATCATAAGCACTGTGAAGTGAGGTGCAGCTACTAGGGGGTTTCTTTTGCTGCTATGGC HS_haplotype2 CCATCATAAGCACTGTGAAGTGAGGTGCAGCTACTAGGGGGTTTCCTCTGCTGCTATGGC ********************************************* * ************ HS_haplotype1 CAGAGCAAAATCTACTATTGAAAGGTTAAAATGGTCTTGTGCATATATTTTTCACATTGT HS_assemblymutate CAGAGCAAAATCTACTATTGAAAGGTTAAAATGGTCTTGTGCATATATTTTTCACATTGT HS_haplotype2 CAGAGCAAAATCTCCTATTGAAAGGTTAAAATGGTCTTGTGCATATATTTTTCACATTGT ************* ********************************************** HS_haplotype1 GGAGCTCATCTACCCAGCCACTCCAATTCCCAGCCTGGGTTTTTACAAAAATTGTATGGA HS_assemblymutate GGAGCTCATCTACCCAGCCACTCCAATTCCCAGCCTGGGTTTTTACAAAAATTGTATGGA HS_haplotype2 AGAGCTCATCTACCCAGCCACTCCAATTCCCAGCCTGGGTTTTTACAAAAATTGTATGGA *********************************************************** HS_haplotype1 ATATTATAGACAAATTTTGTTGGTGGACACTGCCCTACAGGTGTGACTGGAGATTGTGGA HS_assemblymutate ATATTATAGACAAATTTTGTTGGTGGACACTGCCCTACAGGTGTGACTGGAGATTGTGGA HS_haplotype2 ATATTATAGACAAATTTTGTTGGTGGACACTGCCCTACAGGTGTGACTGGAGATTGTGGA ************************************************************ HS_haplotype1 ATTTTGAGTACTATGTTTTCTCATGCAATTCTGAGTCAAGCCTGGATTACTGATTTAAAA HS_assemblymutate ATTTTGAGTACTATGTTTTCTCATGCAATTCTGAGTCAAGCCTGGATTACTGATTTAAAT HS_haplotype2 ATTTTGAGTACTATGTTTTCTCATGCAATTCTGAGTCAAGCCTGGATTACTGATTTAAAT *********************************************************** HS_haplotype1 CAAAAGAAATATGCTCAGGCAGATATAGTGATATTACTTGAACCTCCAGGTGCTGTGCTG HS_assemblymutate CAAAAGAAATATGCTCAGGCAGATATAGTGATATTACTTGAACCTCCAGGTGCTGTGCTG HS_haplotype2 CAAAAGAAATATGCTCAGGCAGATATAGTGATATTACTTGAACCTCCAGGTGCTGTGCTG ************************************************************ HS_haplotype1 TTGTTATAATTATGGTAGACCGAGAAGAGAATCCCTCCCTGAGATGGAGTGGCTTATAAT HS_assemblymutate TTGTTATAATTATGGTAGACCGAGAAGAGAATCCCTCCCTGAGATGGAGTGGCTTATAAT HS_haplotype2 TTGTTATAATTATGGTAGACCGAGAAGAGAATCCCTCCCTGAGATGGAGTGGCTTATAAT ************************************************************ HS_haplotype1 TGATTGGGTACCCAAGTAAATGTTCATTTGTTCTGCGTCCTGGCCCCATTAGTTTAAGTA HS_assemblymutate TGATTGGGTACCCAAGTAAATGTTCATTTGTTCTGCGTCCTGGCCCCATTAGTTTAAGTA HS_haplotype2 TGAGTGGGTACCCAAGTAAATGTTCATTTGTTCTACGTCCTGGCCCCATTAGTTTAAGTA *** ****************************** ************************* HS_haplotype1 GCTGGAAGGGCCTGCACTGGTATTATTGCTCTTTTTTAATAAGACGCCTGCATTTCATAT HS_assemblymutate GCTGGAAGGGCCTGCACTGGTATTATTGCTCTTTTTTAATAAGACGCCTGCATTTCATAT HS_haplotype2 GCTGGAAGGGCCTGAACTGGTATTATTGCTCTTTTTTAATAAGACGCCTGCATTTCATAT ************** ********************************************* HS_haplotype1 AAATTGTCTCCAGGCCCTCAAAGAAAATATTGTTTTTCCTATTAATAAATAATATCATTT HS_assemblymutate AAATTGTCTCCAGGCCCTCAAAGAAAATATTGTTTTTCCTATTAATAAATAATATCATTT HS_haplotype2 AAATTGTCTCCAGGCTCTCAAAGAAAATATTGTTTTTCCTATTAATAAATAATATCATTT *************** ******************************************** HS_haplotype1 CAACACAAGCAGTGGCTGTCTGTGGTCTTAGACCCCGGGGTTTTCATGTAGGTCTCTTGT HS_assemblymutate CAACACAAGCAGTGGCTGTCTGTGGTCTTAGACCCCGGGGTTTTCATGTAGGTCTCTTGT HS_haplotype2 CAACACAAGCAGTGGCTGTCTGTGGTCTAAGACCCCGGGGTTATCAAGTAGGTCTCTTGT **************************** ************* *** ************* HS_haplotype1 GCCCTGAACGAACTAAGAGCATGATGGGTGCCCTGCGTGAAAAAATCCATATCTTGAAGT HS_assemblymutate GCCCTGAACGAACTAAGAGCATGATGGGTGCCCTGCGTGAAAAAATCCATATCTTGAAGT HS_haplotype2 GCCCTGAAGGAACTAAGAGCATGATGGGTGCCCTGCGTGAAAAAATCCATATCTTGAAGT ******** *************************************************** HS_haplotype1 GACTGGGGCTTACCGAAGGGAAGAGATTTCTGCAAGTGACAAGGATATGGCCCGGCCTCA HS_assemblymutate GACTGGGGCTTACCGAAGGGAAGAGATTCCTGCAAGTGACAAGGATATGGCCCGGCCTCA HS_haplotype2 GACTGGGGGTAACAGAAGGGAAGAGATTCCTGCAAGTGACAAGGATATGGCCCGGCCTCA ******** * ** ************** ******************************* HS_haplotype1 GCACGGTGGCATTAGAGAATGGGGACTAGTCTGGACGAGTAGTGCTGAGTGAACCACCCC HS_assemblymutate GCACGGTGGCATTAGAGAATGGGGACTACTCTGGACGAGTAGTGCTGAGTGAACCAGCCC HS_haplotype2 GCACGGTGGCATTAGAGAATGGGGACTACTCTGGACGAGTAGTGCTGAGTGAACCAGCCC **************************** *************************** *** HS_haplotype1 AGCAGGGATAGAGACATATCTGGTCTGGGCGGAACTTGGGTTCCACAACCCCGTCTGGGC HS_assemblymutate AGCAGGGATAGAGACATATCTGGTCTGGGAGGAACTTGGGTTCCACAACCCCGTCTGGGC HS_haplotype2 AGCAGGGATAGAGACATATCTGGTCTGGGAGGAACTTGGGTTCCACAACCCCGTCTGGGC ***************************** ****************************** HS_haplotype1 TGAGATAATATATTTGACTTTAAGTAGTTGCATAGTTAGACCTGGGTATTGTCGTTTTTG HS_assemblymutate TGAGATAATATATTTGACTTTAAGTAGTTGCATAGTTAGACCTGGGTATTGTCATTTTTG HS_haplotype2 TGAGATAATATATTTGACTTTAAGTAGTTGCATAGTTAGACCTGGGTATTGTCATTTTTG ***************************************************** ****** HS_haplotype1 ACCTTACTATCTTCCAAGTGCATTAGTATTGGATCTACTAAGAACATTTACTAGTTCCAG HS_assemblymutate ACCTTACTATCTTCCAAGTGCATTAGTATTGGATCTGCTAAGAACATTTACTAGTTCCAG HS_haplotype2 ACCTTACTATCTTCCAAGTGCATTAGTATTGGATCTGCTAAGAACATTTACTAGTTCCAG ************************************ *********************** HS_haplotype1 CCCACGCTATAATCCAAGAAAATTCCCTCTGGATGTAGCCCCAACAAGCATTGCTCTTAT HS_assemblymutate CCCACGCTATAATCCAAGAAAATTCCCTCTGGATGTAGCCCCAACAAGCATTGCTCTTAT HS_haplotype2 CCCACGCTATAATCCAAGAAAATTCCCTCTGGATGTAGCCCCAACAAGCATTGCTCTTAT ************************************************************ HS_haplotype1 TAAATAACAGAATAGGCTGGCAGCGATTCTAGCCGGGAGTGAGGGAAAGGCATGTAAGCT HS_assemblymutate TAAATAACAGAATAGGCTGGCAGCGATTCTAGCCGGGAGTGAGGGAAAGGCATGTAAGCT HS_haplotype2 TAAATAACAGAATAGGCTGGCAGCGATTCTAGCCGGGAGTGAGGGAAAGGCATGTAAGCT ************************************************************ HS_haplotype1 TTTCCATCTGAAAATCATAATTGGTCCAAAATATGCCTCCCTCTTTATAAATTCAAGTTT HS_assemblymutate TTTCCATCTGAAAATCATAATTGGTCCAAAATATGCCTCCCTCTTTATAAATTCAAGTTT HS_haplotype2 TTTCCATCTTAAAATCATAATTGGTCCAAAATATGCCTCCCTCTTTATAAATTCAAGTTT ********* ************************************************** HS_haplotype1 CATTGTCTACATGGGGATCCCAAAAAATTGGGATTAGTATGTATCTAAAAATGAGACTGA HS_assemblymutate CATTGTCTACATGGGGATCCCAAAAAATTGGGATTAGTATGTATCTAAAAATGAGACTGA HS_haplotype2 CATTGTCTACATGGGGATCCAAAAAAATTGGGATTAGTATGTATCTAAAAATGAGACTGA ******************** *************************************** HS_haplotype1 AGGTCTCCTGTCCAGTCAGACAAAATACTAGCCACCATAGGTTTCAAGAGTAGCGATCTT HS_assemblymutate AGGTCTCCTGTCCAGTCAGACAAAATACTAGCCACCATAGGTTTCAAGAGTAGGGATCTT HS_haplotype2 AGGTCTCCTGTCCAGTCAGACAAAATACTAGCCACCATAGGTTTCAAGAGTAGGGATCTT ***************************************************** ****** HS_haplotype1 TTCTTTTCTTCTCTCTGCGCCTAACAAAACTATATGAGACCTCCAGAACTTCTCAGCTCA HS_assemblymutate TTCTTTTCTTCTCTCTGCGCCTAACAAAACTATATGAGACCTCCAGAACTTCTCAGCTCA HS_haplotype2 TTCTTTTCTTCTCTCTGCGCCTAGCAAAACTATATGAGAGCTCCAGAACTTCTCAGCTCA *********************** *************** ******************** HS_haplotype1 TCCTCATGTGTGGAACCATGTGGCTGGCGGTGAAAACTGACTCAAACGTCTAGAAATAAG HS_assemblymutate TCCTCATGTGTGGAACCATGTGGCTGGCGGTGAAAACTGACTCAAACGTCTAGAAATAAG HS_haplotype2 TCCTCATGTGTGGATCGATGTGGCTGGCGGTGAAAACTGACTTAAACGTCTAGAAATAAG ************** * ************************* ***************** HS_haplotype1 CACACTTACATATCCGAATTGTATGTGAACTCTGATGAAACCACATTAGAAATAAGTATC HS_assemblymutate CACACTTACATATCCGAATTGTATGTGAACTCTGATGAAACCACATTAGAAATAAGTATC HS_haplotype2 CACACTTACATATCAGAATTGTATGTGAACTCTGATGAAACCACATTAGAAATAAGTATC ************** ********************************************* HS_haplotype1 CCCTGGAATGAACCTTCAGTCGTGGTGAGGTGCGTGTTTGAGCCACTGCGGTGAGCTGTG HS_assemblymutate CCCTGGAATGAACCTTCAGTCGTGGTGAGGTGCGTGTTTGAGCCACTGCGGTGAGCTGTG HS_haplotype2 CCCTGGAATGAACCTTCAGTGGTGGTGAGGTGCGTGTTTGAGCCACTGCGGTGAGCTGTG ******************** *************************************** HS_haplotype1 CCTCTCACTGCACATGCAAAAGAAACGTTGACAACTCCAATAATAGGACTTTGCTTGTTA HS_assemblymutate CCTCTCACTGCACATGCAAAAGAAACGTTGACAACTCCAATAATAGGACTTTGCTTGTTA HS_haplotype2 CCTCTCACTGCACATGCAAAAGAAACGTTGACAACTCCAATAAAAGGACTTTGCTTGTTA ******************************************* **************** HS_haplotype1 TCAGAACTCCTCATAATACAAATGCCACTTCACTTGAAATACGCACGTTTTTATACATAT HS_assemblymutate TCAGAACTCCTCATAATACAAATGCCACTTCACTTGGAATACGCACGTTTTTATACATAT HS_haplotype2 TCATAACTCCTCATAATACAAATGCCACTTCACTTGGAATACGCACGTTTTTATACATAT *** ******************************** *********************** HS_haplotype1 GGGCTGGGTGGCCCAGGCAGGGCTGTGTTGAAGTGAGGAATGC-CTCCGTGTGCTGTAAC HS_assemblymutate GGGCTGGGTGGCCCAGGCAGGGCTGTGTTGAAGTGAGGAATGCACTCCGTGTGCTGTAAC HS_haplotype2 GGGCTGGGTGGCCCAGGCAGGGCTGTGTTGAAGTGAGGAATGC-CTCCGTGTGCTGTAAC ******************************************* **************** HS_haplotype1 TTATTTTAATGTTAATGAAGCTTCTTCTGAGGCACCAAAGTGCCTTTGGTAGAGTGCTCT HS_assemblymutate TTATTTTAATGTTAATGAAGCTTCTTCTGAGGCACCAAAGTGCCTTTGGTAGAGTGCTCT HS_haplotype2 TTATTTTAATGTTAATGAAGCTTCTTCTGAGGCACCAAAGTGCCTTTGGTAGAGTGCTCT ************************************************************ HS_haplotype1 TGAATTTTGAAAGGCAGTAGCAAGAAATGGCAGATTGGTGGCCTCGCTAATTCACTTTGG HS_assemblymutate TGAATTTTGAAAGGCAGTAGCAAGAAATGGCAGATTGGTGGCCTCGCTAATTCACTTTGG HS_haplotype2 TGAATTTTGAAAGGCAGTAGCAAGAAATGGCAGATTGGTGGCCTCGCTAATTCACTTTGG ************************************************************ HS_haplotype1 AACTCCGGCCTGGGTCCTTGTGTGCCAGGGAGCCACTGTTAATATGGGCCGGCCGCTAAT HS_assemblymutate AACTCCGGCCTGGGTCCTTGTGTGCCAGGGAGCCACTGTTAATATGGGCCGGCCGCTAAT HS_haplotype2 AACCCCGGCCTGGGTCCTTGTGTGCCAGGGAGCCACTGTTAATATGGGCCGGCCGCTAAT *** ******************************************************** HS_haplotype1 ATTTTATCTCACTTTGTATTCCTCACCTAGAAAATAGTAGGACTGACAAACCCCGCCCGC HS_assemblymutate ATTGTATCTCACTTTGTGGTCCTCACCTAGAAAAGGGTAGGACTGACAAACCCCGCCCGC HS_haplotype2 ATTGTATCTCACTTTGTGGTCCTCACCTACAAAAGGGTAGGACTGACAAACCCCGCCCGC *** ************* ********** **** ************************ HS_haplotype1 CCTTGCCTGTCGTCAAAAAGTGCCCATGTAATCTTAACAGCAGATCGACTCCCCAGATTG HS_assemblymutate CCTTGCCTGTCGTCAAAAAGTGCCCATGTAATCTTAACAGCAGATCGACCCCCCAGATTG HS_haplotype2 CCTTGCCTGTCGTCAAAAAGTGCCCATGTAATCTTAACAGCAGATCGACCCCCCAGATTG ************************************************* ********** HS_haplotype1 ATTACAGCGTTAGGATGTATCCCAACATCTGAATTGCCGATAACAAAACAGGCTTCTATC HS_assemblymutate ATTACAGCTTTAGGATGTATCCCAACATCTGAATTGCCGATAACAAAACAGGCTTCTATC HS_haplotype2 ATTACAGCTTTAGGATGTATCCCAACATCTGAATTGCCCATAACAAAACAGGCTTCTATC ******** ***************************** ********************* HS_haplotype1 AGCCTCCTGTGACAGGTGCTTGAAGCTCTATCCAGGGTCTAGACAAAAGCCTCATAGATA HS_assemblymutate AGCCTCCTGTGACAGGTGCTTGAAGCTCTACCCAGGGTCTAGACAAAAGCCTCATAGATA HS_haplotype2 AGCCTCCTGTGACAGGTGCTTGAAGCTCTACCCAGGGTCTAGACAAAAGCCTCATAGATA ****************************** ***************************** HS_haplotype1 AAGCACGCCCGGCGTGAGAAAACAGCACCACCATGATATTGTTCACTTGAGTGAGCATCT HS_assemblymutate AAGCACGTCCGGCGTGAGAAAACAGCACCACCATGATATTGTTCACTTGAGTGACCATCT HS_haplotype2 AAGCACGTCCGGCGTGAGAAAACAGCACCACCATGATATTGTTCACTTGAGTGACCATCT ******* ********************************************** ***** HS_haplotype1 TGATTTAAGGCTCACTTAAATACATACTACCCTCCCATGCTAAAGCCACTCTCAAAAATC HS_assemblymutate TGATTTAAGGCTCACTTAAATACATACTACCTTCCCATGCTAAAGCCACTCTCAAAAATC HS_haplotype2 TGATTTAAGGCTCACTTAAATACATACTACCTTCCCATGCTAAAGCCACTCTCAAAAATC ******************************* **************************** HS_haplotype1 TGCTCAGGGTTCCTGCCAAGAAATTAGAAAAGGCCGAGTATAGTTGAATGCAGCGTCGCT HS_assemblymutate TGCTCAGGGTTCCTGCCAAGAAATTAGAAAAGGCCGAGTATAGTTGAATGCAGCGTCGCT HS_haplotype2 TGCTCAGGGTTCCTGCCAAGAAATTAGAAAAGGCCGAGTATAGTTGAATGCAGCGTCGCT ************************************************************ HS_haplotype1 GCAAACTTCAATTCCAGAGTCAGCCACTGGAACCTGGCCGAGTGATGAGATCCTCCATGT HS_assemblymutate GCAAACTTCAATTCCAGAGTCAGCCACTGGAACCTGGCCGAGTGATGAGATCCTCCATGT HS_haplotype2 GCAAACTTCAATTCCAGAGTCAGCCACTGGAACCTGGCCGAGTGATGAGATCCTCCATGT ************************************************************ HS_haplotype1 AAACAGTGTCTGAGAAGGATTATCTCTCTATTAAGTCATGATATTATAATTGTCCCTGCC HS_assemblymutate AAACAGGGTCTGAGAAGGATTATCTCTCTATTAAGTCATGATATTATAATTGCCCCTGCC HS_haplotype2 AAACAGGGTCTGAGAAGGATTATCTCTCTATTAAGTCATGATATTATAATTGCCCCTGCC ****** ********************************************* ******* HS_haplotype1 TGTTCAAGGGGCGAGCCCGGCTCATGCTATTATATAGCATCTCAAGGTCCATTCTAGAAG HS_assemblymutate TGTTCAAGGGGCGAGCCCGGCTCATGCTATTTTATAGCATCTCAAGGTCCATTCTAGAAG HS_haplotype2 TGTTCAAGGGGCGAGCCCGGCTCATGCTATTTTATAGCATCTCAAGGCCCATTCTAGAAG ******************************* *************** ************ HS_haplotype1 GGGCTTCACAACACACGTGGATGAGAAATATAGCCTGAAACCTCTTCTTTGGAGGCTGAG HS_assemblymutate GGGCTTCACAACACACGTGGATGAGAAATATAGCCTGAAACCTCTTCTTTGGAGCCTGAG HS_haplotype2 GGGCTTCACAACACACGTGGATGAGAAATATAGCCTGAAACCTCTTCTTTGGAGCCTGAG ****************************************************** ***** HS_haplotype1 TTCAATATTGACATTTCTTGCGCGCTTCCTTTTCATTTATTTACAACACCAATGAGCCCT HS_assemblymutate TTCAATATTGACATTTCTTGCGCGCTTCCTTTTCATTTATTTACAACACCAATGAGCCCA HS_haplotype2 TTCAATATTGACATTTCTTGCGCGCTTCCTTTTCATTTATTTACAACACCAATGAGCCCA *********************************************************** HS_haplotype1 GAGTGAGCCTAGGAAGTCTGAAATTATCTTTCATACCACAAGCTGATTCATAGCATGGAT HS_assemblymutate GAGTGAGCCTAGGAAGTCTGAAATTATCTTTCATACCACAAGCTGATTCATAGCATGGAT HS_haplotype2 GAGTGAGCCTAGGAAGTCTGAAATTATCTTTCATACCACAAGCTGATTCATAGCATGGAT ************************************************************ HS_haplotype1 GCCTAAGATCAAGTCAGTTGTCAT-ATTGCCGAGGCTGAGCACAATTCACCATCTGGGTG HS_assemblymutate GCCTAAGATCAAGTCAGTTGTCATGATTGCCGAGGCTGAGCACAATTCACCATCTGGGTG HS_haplotype2 GCCTAAGATCAAGTCAGTTGTCAT-ATTGCCGAGGCTGAGCACAATTCACCATCTGGGTG ************************ *********************************** HS_haplotype1 AGGAATAAACAATGGTGGGAGCAATCCGGATCTTTTAATAGGATATGACTTAAATGACAG HS_assemblymutate AGGAATAAACAATGGTGGGAGCAATCCGGATCTTTTAATAGGATATGACTTAAATGACAG HS_haplotype2 AGGAATAAACAATGGTGGGAGCAATCCGGATCTTTCAATAGGATATGACTTAAATGACAG *********************************** ************************ HS_haplotype1 TTGGCTCACATAGCTTGCAGAAATAAAAACCTCAAATTATGGTAACCAATGACTTGGTAC HS_assemblymutate TTGGCTCACATAGCTTGCAGAAATAAAAACCTCAAATTATGGTAACCAATGACTTGGTAC HS_haplotype2 TTGGCTCACATAGCTTGCAGAAATAAAAACCTCAAATTATGGTAACCAATGACATGGTAC ***************************************************** ****** HS_haplotype1 AAGTGCTGTTTCAGCTACTGTGACAAACTGAAAAAATGCACCCAAATAATACCTGAGCCA HS_assemblymutate AAGTGCTGTTTCAGCTACTGTGACAAACTGAAAAAATGCTCCCAAATCATACCTGAGCCA HS_haplotype2 AAGTGCTGTTTCAGCTACTGTGACAAACTGAAAAAATGCTCCCAAATCATACCTGAGCCA *************************************** ******* ************ HS_haplotype1 AGAGGCCCTGCCAAGCACTCTTCCTCGCAAAGGCGGCTGACCAGTGTCTCTTCTGGGTCT HS_assemblymutate AGAGGCCCTGCCAAGCACTCTTCCTCGCAAAGGCGGCTGACCAGTGTCTCTTCTGGGTCT HS_haplotype2 AGAGGCCCTGCCAAGCACTCTTCCTCGCAAAGGCGGCTGACCAGTGTCTCTTCTGGGTCT ************************************************************ HS_haplotype1 GCAGGTGTAAAATATCTATCATGTGATCCTGAATGTGTTAGGTTCAAGGCCTTCTAAAAT HS_assemblymutate GCAGGTGTAAAATATCTATCATGTGATCCTGAATGTGTTAGGTTCAAGGCCTTCTAAAAT HS_haplotype2 GCAGGTGTAAAATATCTATCATGTGATCCTGAATGTGTTAGGTTCAAGGCCTTCTAAAAT ************************************************************ HS_haplotype1 TAACATATTTAGACAGGAGAGAGTGTGCAACAATAACCTACAAAAAGTTAATCTGAAGTC HS_assemblymutate TAACATATTTAGACAGGAGAGAGTGTGCAACAATAACCTACAAAAAGTTAATCTGAAGTC HS_haplotype2 TAACATATTTAGACAGGAGAGAGTGTGCAACAATAACCTACAAAAAGTTAATCTGAAGTC ************************************************************ HS_haplotype1 AGCATATATAGAATTTTGGGAGTGATGACTACAAAAAAAGAGAAACACACTTTCCAAATT HS_assemblymutate AGCATATATACGATTTTGGGAGTGATGACTACAAAAAAGGAGAAACACACTTTCCAAATT HS_haplotype2 AGCATATATACGATTTTGGGAGTGATGACTACAAAAAAGGAGAAACACACTTTCTAAATT ********** ************************** *************** ***** HS_haplotype1 GAGATGTGTAAAAAGGAGCCCTGACCTCACGCCATATACATTATCCCCTACAAATGCCTT HS_assemblymutate GAGATGTGTAAAAAGGAGCCCTGACCTCACGCCATATACATTATCCCCTACAAATGCCTT HS_haplotype2 GAGATGTGTAAAAAGGAGCCCTGACCTCACGCCATATACATTATCCCCTACAAATGCCTT ************************************************************ HS_haplotype1 TGTTTGCAGTAATCTTATATTCTTTGCTTAGCTGTTCCAACATACTTTTATAAGAAAAGG HS_assemblymutate TGTTTGCAGTAATCTTATATTCTTTGCTTAGCTGTTCCAACATACTTTTATAAGTAAAGG HS_haplotype2 TGTTTGCAGTAATCTTATATTCTTTGCTCAGCTGTTCCAACATACTTTTATAAGTAAAGG **************************** ************************* ***** HS_haplotype1 ACAAATAATGAGCTTAAAGGATCGCAGCCCCCGAGGACATCGTTAGGTCTCTCCATTGGC HS_assemblymutate ACAAATAATGTGCTTAAAGGATCACAGCCCCCGAGGACATCGTTAGGTCTCTCCCTTGGC HS_haplotype2 ACAAATAATGTGCTTAAAGGATCACAGCCCCCGAGGACATCGTTAGGTCTCTCCCTTGGC ********** ************ ****************************** ***** HS_haplotype1 CTTTTTGGACTAACATCCACAAATTCCAATTTTTTAAAACTGTCTCAGCCTCTGCAAGGC HS_assemblymutate CTTTTTGGACTAACATCCACAAATTCCAATTTTTTAAAACTGTCTCAGCCTCTGCAAGGC HS_haplotype2 CTTTTTGGACTAACATCCACAAATTCCAATTTTTTAAAACTGTCTCAGCCTCTGCAAGGC ************************************************************ HS_haplotype1 ATGATGTCCTGAGCAATGCATGGCAAGTGATTCTAAACCCAATCATGTTGATTCCATGTA HS_assemblymutate ATGATGTCCTGAGCAATGCATGGCAAGTGATTCTAAACCCAATCATGTTGATTCCATGTA HS_haplotype2 ATGATGTCCTGAGCAATGCATGGCAAGTGATTCTAAACCCAATCATGTTGATTCCATGTA ************************************************************ HS_haplotype1 GAACTATTATTGTGTACCCCAATGACGTTGAGAGGTAATTGCACATAATGCCACCTTGCA HS_assemblymutate GAACTATTATTGTGTACCCCAATGACGTTGAGAGGTAATTGCACATAATGCCACCTTGCA HS_haplotype2 GAACTATTATTGTGTACCCCAATGACGTTGAGAGGTAATTGCACATAATGCCACCTTGCA ************************************************************ HS_haplotype1 GAGAATGGCGGGCAGGACACTCAGCTTCCCAAAAATGCTGGAATTATTCTCTATGTAACA HS_assemblymutate GAGAATGGCGGGCAGGACACTCAGCTTCCCAAAAATGCTGGAATTATTCTCTATGTAACA HS_haplotype2 GAGAATGGCGGGCAGGACACTCAGCTTCCCAAAAATGCTGGAATTATTCTGTATGTAACA ************************************************** ********* HS_haplotype1 AATAATTCAAGAAAGAAGCAGGGACCCAGGCGCCGGCTACTACTACTATGCCATTCAACT HS_assemblymutate AATAATTCAAGAAAGAAGCAGGGACCCAGGCGCCGGCTACTACTACTATGCCATTCAACT HS_haplotype2 AACAATTCAAGAAAGAAGCAGGGACCCAGGCGCCGGCTACTACTACTATGCCATTCAACT ** ********************************************************* HS_haplotype1 ACTTAGGAAGTGTTATGTGCGCATTTTCTAGTGCATCTTTTGCAGAGAGTTCTCATCACT HS_assemblymutate ACTTAGGAAGTGTTATGTGCGCATTTTCTAGTGCATCTTTTGCAGAGAGTTCTCATCACT HS_haplotype2 ACTTAGGAAGTGTTATGTGCGCATTTTCTAGTGCATCTTTTGCAGAGAGTTCTCATCACT ************************************************************ HS_haplotype1 TCAAA-GTGCTAATATCAAACACTCTGACGGATGTGGGAACACTTCATGGACTAGTCTGT HS_assemblymutate TCAAAGGTGCTACTATCAAACACTCTGACGGATGTGGGAACACTTCATGGACTAGTCTGT HS_haplotype2 TCAAA-GTGCTACTATCAAACACTCTGACGGATGTGGGAACACTTCATGGACTAGTCTGT ***** ****** *********************************************** HS_haplotype1 AGAGTGTCTCTACAAGCCACCGCATGGTGGCGGACTTTCAGACTCGGGGAGGTGTTTTTA HS_assemblymutate AGAGTGTCTCTACAAGCCACGGCATGGTGGCGGACTTTCAGACTCGGGGAGGTGTTTTTA HS_haplotype2 AGAGTGTCTCTACAAGCCACGGCATGGTGGCGGACTTTCAGACTCGGGGAGGTGTTTTTA ******************** *************************************** HS_haplotype1 AGACCAAAAGAGAAGCCTCATTATGACTCTTGTATTTATAAATGCAACCATACTTGAGAA HS_assemblymutate AGACCAAAAGAGAAGCCTCATTATGACTCTTGTATTTATAAATGCAACCATACTTGAGAA HS_haplotype2 AGACCAAAAGAGAAGCCTCATTATGACTCTTGTATTTATAAATGCAACCATACTTGAGAA ************************************************************ HS_haplotype1 TCCCATTTTATTGTCCTTCGATTGAGAGGTGCTGGAAGTGGTGTCTATTGCTCTTGCCAA HS_assemblymutate TCCCATTTTATTGTCCTTCGATTGAGAGGTGCTGGAAGTGGTGTCTATTGCTCTTGCCAA HS_haplotype2 TCCCATTTTATTGTCCTTCGATTGAGAGGTGCTGGAAGTGGTGTCTATTGCTCTTGCCAA ************************************************************ HS_haplotype1 GCCAGTGTGTAGGAATCTGAGGCACACATGGTTGCCATGCACTGAAATGTTTTGTCTGGA HS_assemblymutate GCCAGTGTGTAGGAATCTGAGGCACACATGGTTGCCATGCACTGAAATGTTTTGTCTGGA HS_haplotype2 GCCAATGTGTAGAAATCTGAGGCACACATGGTTGCCATGCACTGAAATGTTTTGTCTTGA **** ******* ******************************************** ** HS_haplotype1 ATGGAAAGGCTGGGCCACTATAAAATCCCTTCGATCTATTGAGTCAGTTAGATAAATTTT HS_assemblymutate ATGGAAAGGCTGGGCCACTATAAAATCCCTGCGATCTATTGAGTCAGTTAGATAAATTTT HS_haplotype2 TTGGAAAGGCTGGGCCAGTATAAAATCCCTGCGATCTATTGAGTCAGTTAGATAAATTTT **************** ************ ***************************** HS_haplotype1 AGAATTCCTCAGTTTCATTATGAATAATAAAGGAAGTATAAGCATTCTCCATAACTAATG HS_assemblymutate AGAATTCCTCAGTTTCATTATGAATAATAAAGGAAGTATAAGCATTCTCCATAACTAAGG HS_haplotype2 AGAATTCCTCAGTTTCATTATGAATAATAAAGGAAGTATAAGCATTCTCCATAACTAAGG ********************************************************** * HS_haplotype1 GACCTCATGTATGCCGCGCCCAGGTAGAGTGGCAGGGCCCTTTTTAATTTACTACATAGG HS_assemblymutate GACCTCATGTATGCCGCGCCCAGGTAGAGTGGCAGGGCCCCTTTCAATTTACTATATAGG HS_haplotype2 GACCTCATGTATGCCGCGCCCAGGTAGAGTGGCAGGGCCCCTTTCAATTTACTATATAGG **************************************** *** ********* ***** HS_haplotype1 AGCTTGCTTGTTGGTCCACAGCTCTT-----CACATAATATCTCAATCACCCCTTAGAAT HS_assemblymutate AGCTTGCTTGTTGGTCCACAGCTCTTGAGCACACATAATATCTCAATCACCCCTTAGAAT HS_haplotype2 AGCTTGCTTGTTGGTCCACAGCTCTT-----CACATAATATCTCAATCACCCCTTAGAAT ************************** ***************************** HS_haplotype1 GCTTCATTTGTGGCAAGATATACCATGACTAGTCATACAAATTCTTCTAGTTATAAGTGC HS_assemblymutate GCTTCATTTGTGGCAAGATATACCATGACTAGTCATACAAAGTCTTCTAGTTATAAGTGC HS_haplotype2 GTTTCATTTGTGGCAAGATATACCATGACTAGTCATACAAAGTCTTCTAGTTATAAGTGC * *************************************** ****************** HS_haplotype1 TCACAATTTCTAAGACAGCAACAACACCGCCACTTTTCTGAGGCTGTCTTACAGGCACTC HS_assemblymutate TCACAATTTCTAAGACAGCAACAACACCGCCACTTTTCTGAGGCTGTCTTACAGGCACTC HS_haplotype2 TCACAATTTCTAAGACAGCAACAACACCGCCACTTTTCTGAGGCTGTCTTACAGGCACTC ************************************************************ HS_haplotype1 AGGAAACATCCGAGGCAGACTATATTCAAACTCCCTTAACTCCATAATGTTTTAAGCAAA HS_assemblymutate AGGAAACATCAGAGGCAGACTATATTCAAACTCCCTTAACTCCATAATGTTTTAAGCAAA HS_haplotype2 AGGAAACATCAGAGGCAGACTATATTCAAACTCCCTTAACTCCATATTGTTTTAAGCAAA ********** *********************************** ************* HS_haplotype1 AAGTGAAGCTGGGAAAGCCATACACTGACTCACTGCAGGTTCAGATTTAATATATGCCTT HS_assemblymutate AAGTGAAGCTGGGAAAGCCATACACTGACTCACTGCAGGTTCAGATTTAATATATGCCTT HS_haplotype2 AAGTGAAGCTGGGAAAGCCATACACTGACTCACTGCAGGTTCAGATTTAATATATGCCTT ************************************************************ HS_haplotype1 CAGCCTGACTTGTTTAATAAAACCATCATAGAAATAAAGTCACTTCTTTATTGGAGCGGG HS_assemblymutate CAGCCTGACTTGTTTAATAAAACCATCATAGAAATAAAGTCACTTCTTTATTGGAGCGGG HS_haplotype2 CAGCCTGACTTGTTTATTAAAACCATCATAGAAATAAAGTCACTTCTTTATTGGAGTGGG **************** *************************************** *** HS_haplotype1 AGTTCTCTCGGCTCTTCTGGCTTGCTCCCCATAGATATAGTTTCCATGTAAAATAACTGC HS_assemblymutate AGTTCTCTCGGCTCTTCTGGCTTGCTCCC-ATAGATATAGTTTCCATGTAAAATAACTGC HS_haplotype2 AGATCCCTCGGCTCTTCTTGCTTGCTCCCAATAGATATAGTTTCCATGTAAAATAACTGC ** ** ************ ********** ****************************** HS_haplotype1 CAGCTGGCCAGACAGGTTCAGCCTGGCAACTGGTGGCGCAGGTGAAAGACTCTGGGTGTC HS_assemblymutate CAGCTGGCCAGACAGGTTCAGCCTGGCAACTGGTGGCGCAGGTGAAAGACTCTGGGTGTC HS_haplotype2 CAGCTGGCCAGACAGGTTCAGCCTGGCAACTGGTGGCGCAGGTGAAAGACTCTGGGTGTC ************************************************************ HS_haplotype1 TTTGGAATAATCCATCTCCTGAATAAGCAAGATGGAATATTTTGATAGTTTCCTACATCT HS_assemblymutate TTTGGAATAATCCATCTCCTGAATAAGCAAGATGGAATATTTTGATAGTTTCCTACATCT HS_haplotype2 TTTGGAATAATCCATCTCCTGAATAAGCAAGATGGAATATTTTGATAGTTTCCTACATCT ************************************************************ HS_haplotype1 TTCTAATTAGCTAAGTGGCTCACATCAAATACTATAGGTTGTGTGAGAAAGAACACATCC HS_assemblymutate TTCTAATTAGCTAAGTGGCTCACATCAAATACTATAGGTTGTGTGAGAAAGAACACATCC HS_haplotype2 TTCTAATTAGCTAAGTGGCTCACATCAAATACTATAGGTTGTGTGAGAAAGAACACATCC ************************************************************ HS_haplotype1 ACAGTGGCAGTTTCTCTTATAGTAGGAAACTCCCTTCCGGGAGGCCATTACATCTTTGAG HS_assemblymutate ACAGTGGCAGTTTCTCTTATAGTAGGAAACTCCCTTCCGGGAGGCCATTACATCTTTGAG HS_haplotype2 ACAGTGGCAGTTTCTCTTATAGTAGGAAACTCCCTTCCGGGAGGCCATTACATTTTTGAG ***************************************************** ****** HS_haplotype1 CAGCGGGTGGTGTTGGGAGAGTATCTTTCATGGCACTCAAAATGAAGCAACTCTTTGTAT HS_assemblymutate CAGCGGGTGGTGTTGGGAGAGTATCTTTCATGGCACTCAAAATGAAGCAACTCTTTGTAT HS_haplotype2 CAGCTGGTGGTGTTGGGAGAGTATCTTTCATGGCACTCAAAATGAAGCAACTCTTTGTAT **** ******************************************************* HS_haplotype1 TTTACCCATTTCCAGCCTGGGTGCAGACCCCCCCCAGCCTGTGTTTGGAGGTTCTGGCTC HS_assemblymutate TTTACCCATTTCCAGCCTGGGTGCAGACCCCCCCCAGCCTGTGTTTGGAGGTTCTGGCTC HS_haplotype2 CTTACCCATTTCCAGCCTGGGTGCAGACCCCCCCCAGCCTGGGTTTGGAGGTTCTGGCTC **************************************** ****************** HS_haplotype1 CACATCAGAGGCAAGTTAGCTGCCTCCCAGCACACCAGGCGGCCTCTATGCTATTAAGGT HS_assemblymutate CACATCAGAGGCAAGTTAGCTGCCTCCCAGCACACCAGGCGGCCTCTATGCTATTAAGGT HS_haplotype2 CACATCAGAGGCAAGTTAGCTGCCTCCCAGCACACCAGGCGGCCTCTATGCTATTAAGGT ************************************************************ HS_haplotype1 AAAATATCCCTGTGTGGGTGACTGGTGAACTCTTCTAAAAAGTCTGTAGCTGCACTGCAG HS_assemblymutate AAAATATCCCTGTGTGGGTGACTGGTGAACTCTTCTAAAAAGTCTGTAGCTGCACTGCAG HS_haplotype2 AAAATATCCCTGTGTGGGTGACTGGTGAACTCTTCTAAAAAGTCTGGAGCTGCACTGCAG ********************************************** ************* HS_haplotype1 GCTGAGCTATAAGTTCAATTCAGCCCTCCTGAGTAAAATAAAGAGAAGAGGGGCAGGGAT HS_assemblymutate GCTGAGCTATAAGTTCAATTCAGCCCTCCTGAGTAAAATAAAGAGAAGAGGGGCAGGGAT HS_haplotype2 GCTGAGCTATAAGTTCAATTCAGCCCTCCTGAGTAAAATAAAGAGAAGAGGGGCAGGGAT ************************************************************ HS_haplotype1 TACAGTACCAACACGACCCACAGGAGAGATTTTCAAAAAGAATTTTTTGTCTTCAAAATA HS_assemblymutate TACAGTACCAACACGACCCACAGGAGAGATTTTCAAAAAGAATTTTTTGTCTTCAAAATA HS_haplotype2 TACAGTACCAACACGACCCACAGGAGAGATTTTCAAAAAGAATTTTTTGTCTTCATAATA ******************************************************* **** HS_haplotype1 ATATTTAATCCATGAATTTTAGATGTTCTCTTCCTGGGACAAAAGTTGGCAGAAGATAAA HS_assemblymutate ATATTTAATCCATGAATTTTAGATGTTCTCTACCTGGGACAAAAGTTGGCAGAAGATAAA HS_haplotype2 ATATTTAATCCATGAATTTTAGATGTTCTCTACCTGGGACAAAAGTTGGCAGAAGATAAA ******************************* **************************** HS_haplotype1 TTTAACATCCCCACTTCAAATACCCTTGGCAGGAACACACCGTTTCTTAATATCTGCAAC HS_assemblymutate TTTAACAGCCCCACTTCAAATACCCTTGGCCGGAACACACCGTTTCTTAATATCTGCAAC HS_haplotype2 TTTAACAGCCCCACTTCAAATACCCTTGGCCGGAACACACCGTTTCTTAATATCTGCAAC ******* ********************** ***************************** HS_haplotype1 TGCAGCTAGCGGCTTCTAAATCTGGAGGAGTGTATACATTTCACTAGCATCTCTGGCCTC HS_assemblymutate TGCAGCAAGCGGCTTCTAAATCTGGAGGAGTGTATACATTTCACTAGCATCTCTGGCCTC HS_haplotype2 TGCAGCAAGCGGCTTCTAAATCTGGAGGAGTGTATACATTTCACTAGCATCTCTGGCCTC ****** ***************************************************** HS_haplotype1 ATTTGCAGCCTCTCAATTATTGGACGCTGGCTAAGCTTCTTGAGACATATGTGGTTGTTT HS_assemblymutate ATTTGCAGCCTCTCAATTATTGGACGCTGGCTAAGCTTTTTGAGACATATGTGGTTGTTT HS_haplotype2 ATTTGCAGCCTCTCAATTATTGGACGCTGGCTAAGCTTTTTGAGACATATGTGGTTGTTT ************************************** ********************* HS_haplotype1 TTCTCCCAGTAACAAAGGAAATAAAGTTAACTTGGGGGATTGATCGCCCTATGTATTTTA HS_assemblymutate TTCTCCCAGTAACAAAGGATATAAAGTTAACTTGGGGGATTGATCACCCTATGTATTTTA HS_haplotype2 TTCTCCCAGTAACAAAGGATATAAAGTTAACTTGGGGGATTGATCACCCTATGTATTTTA ******************* ************************* ************** HS_haplotype1 AAACTTGAAGACCTTTTGCAGGAATTCTGAACTGTCCTCCTGCCTGGCACGTGCCTATCA HS_assemblymutate AAACTTGAAGACCTTTTCCAGGAATTCTGAACTGTCCTCCTGCCTGGCACGTACCTATCA HS_haplotype2 AAACTTGAAGACCTTTTCCAGGAATTCTGAACTGTCCTCCTGCCTGGCACGTACCTATCA ***************** ********************************** ******* HS_haplotype1 GACATGGAAACTATGCTGTCCCACACACAATTACAAGAGGAAGTTAACCACAAATGTTAA HS_assemblymutate GACATGGAACCTATGCTGTCCCACACACAATTACAAGAGGAAGTTAACCACAAATGTTAA HS_haplotype2 GACATGGAACCTATGCTGTCCCACACACAATTACAAGAGGAAGTTAACCACAAATGTTAA ********* ************************************************** HS_haplotype1 GAAGCATCTTGCAATCAGGTCTCCCTTCTTCCTGGGAATCAAACCACAGCTCCCCCGTTA HS_assemblymutate GAAGCATCTTGCAATCAGGTCTCCCTTCTTCCTGGGGATCAAACCACAGCTCCCCCGTTC HS_haplotype2 GAAGCATCTTGCAATCAGGTCTCCCTTCTTCCTGGGGATCAAACCACAGCTCCCCCGTTC ************************************ ********************** HS_haplotype1 CTCAATATATTTTACCTCATCCCACCCCGCGGTGCAGTCACCATGGATATTTGCAAAGTG HS_assemblymutate CTCAATATATTTTACCTTATCCCACCCCTCGGTGCAGTCACCATGGATATTTGCAAAGTG HS_haplotype2 CTCAATATATTTTACCTTATCCCACCCCTCGGTGCAGTCACCATGGATATTTGCAAAGTG ***************** ********** ******************************* HS_haplotype1 ACTGCTTTTGAGGCACAGTAACTTTCTGGGCTATGAGTAAGTATTTTCTTAACATCACAT HS_assemblymutate ACTGCTTTTGAGGCACAGTAACTTTCTGGGCTATGAGTAAGTATTTTCTTAACATCACAT HS_haplotype2 ACTGCTTTTGAGGCACAGTAACTTTCTGGGCTATGAGTAAGTATTTTCTTAACATCACAT ************************************************************ HS_haplotype1 TGCGGAGCACCACAATGAGTCCTGAAGGTTTTGCAGGTGAGACTACTAGGATTCTCTCTA HS_assemblymutate TGCGGAGCACCACAATGAGTCCTGAAGGTTTTGCAGGTGAGACTACTAGGATTCTCTCTA HS_haplotype2 TGCTGAGCACCACAATGAGTCCTGAAGGTTTTGCAGGTGAGACTACTAGGATTCTCTCTA *** ******************************************************** HS_haplotype1 CAGCGGGCTCCACACTGTTATATTTGAGACATTCTCAAGCCTAGCCATGAAGTTCTTTGT HS_assemblymutate CAGCGGGCTCCACACTGTTATATTTGAGACATTCTCCAGCCTAGCCATGAAGTTCTTTGT HS_haplotype2 CAGCGGGCTCCACACTGTTATATTTGAGACATTCTCCAGCCTAGCCATGAAGTTCTTTGT ************************************ *********************** HS_haplotype1 TTTACAAAAACGGGGGCTCAGTTCTAAGAGGCTTATTTAACTTTGTTGCCCACCTTTCTA HS_assemblymutate TTCAAAAAAACGGGGGCTCAGTTCTAAGAGGCTTATTGAACTTTGTTGCCCACCTTTCTA HS_haplotype2 TTCAAAAAAACGGGGGCTCAGTTCTAAGAGGCTTATTGAACTTTGTTGCCCACCTTTCTA ** * ******************************** ********************** HS_haplotype1 AGGCATTCCTGGCCTATCTGCCTACCATGCCAACTGTAATAAGACACCCAGTGAATTGCA HS_assemblymutate AGGCATTCCTGGCCTATCTGCCTACCATGCCAACTGTAATAAGACACCCAGTGAATTGCA HS_haplotype2 AGGCATTCCTGGCCTATCTGCCTATCATGCCAACTGTAATAAGACACCCAGTGAATTGCA ************************ *********************************** HS_haplotype1 ACTTTTGTTTTTCAAGCCAAGCCGGATATTAACACACACTGGAGGCTGCTACCCATAACA HS_assemblymutate ACTTTTGTTTTTCAAGCCAAGCCGGATATTAACACACACTGGAGGCTGCTACCCATAACA HS_haplotype2 ACTTTTGTTTTTCAAGCCAAGCCGGATATTAACACACACAGGAGGCTGCTACCCATAACA *************************************** ******************** HS_haplotype1 CACCCTGACATAACTTAAGGCCCCTTATCATTAACCAAGCTAATACTGTTCTAAGTGCTG HS_assemblymutate CACCCTGACATAACTTAAGGCCCCTTATCATTAACCAAGCTAATCCTGTTCTAAGTGCTG HS_haplotype2 CACCCTGACATAACTTCAGCCCCCTTATCATTAACCAAGCTAATCCTGTTCTAAGTGCTG **************** ** ************************ *************** HS_haplotype1 CAGTGGCCAGCCAAAAGGGTTGCTGAGACCAGCCAAAATAACACCAAAGAA--ATAATCC HS_assemblymutate CAGTGGCCAGCCAAAAGGGTTGCTGAGACCAGCCAAAATAACACCAAAGAAGGATAATCC HS_haplotype2 CAGTGGCCAGCCAACAGGGTTGCTGAGACCAGCAAAAATAACACCAAAGAA--ATAATCC ************** ****************** ***************** ******* HS_haplotype1 AGTGCTCCAGCAAGGCATCTCCACAACAAGGCCTGTTCTTTCTTAGTTAAAAATGGCAAT HS_assemblymutate AGTGCTCCAGCAAGGCATCTCCACAACAAGGCCTGTTCTTTCTTAGTTAAAAATGGCAAT HS_haplotype2 AGTGCTCCAGCAACGCATCTCCACAACAAGGCCTGTTCTTTCTTACTTAAAAATGGCAAT ************* ******************************* ************** HS_haplotype1 ATCATTATACAAAAAGAGTTAATCCCAGGCTGGGGGTGATCTATTTGTGATCCTTCCCCG HS_assemblymutate ATCATTATACAAAAAGAGTTAATCCCAGGCTGGGGGTAATCTATTTGTGATCCTTCCCCG HS_haplotype2 ATCATTATACAAAAAGAGTTAATCCCAGGCTGGGGGTAATCTATTTGTGATCCTTCCCCG ************************************* ********************** HS_haplotype1 GCCTCCCAGGCTCACTGCAGAGATAAAAGAAAGATTTGTAGATGAGGCATGGTGATTCGG HS_assemblymutate GCCTCCCAGGCTCACTGCAGAGATAAAAGAAAGATTTGTAGATGAGGCATGCTGATTCGG HS_haplotype2 GCTTCCCAGGCTCACTGCAGAGATAAAAGAAAGATTTGTAGATGAGGCATGCTGATTCGG ** ************************************************ ******** HS_haplotype1 TTGTAGTTGCCCTCCTGTAGCTCATCCAAACAAAACCTCTTTCATATAATTGGCAGGCAT HS_assemblymutate TTGTAGTTGCCCTCCTGTAGCTCATCCAAACAAAACCGCTTTCATATAATTGGCAGGCAT HS_haplotype2 TTGTAGTTGCCCTCCTGTAGCTCATCCAAACAAAACCGCTTTCATATAATTGGCAGGCAT ************************************* ********************** HS_haplotype1 CTATAGCATCAATAGTCCCATAAGTGATACAAACCAGGCTAGCTGACCCTCCTCCCGAAT HS_assemblymutate CTATAGTATCAATAGTTCCATAATTGATACAAACCAGGCTAGGTGACCCTCCTCCCGAAT HS_haplotype2 CTATAGTATCAATAGTTCCATAATTGATACAAACCAGGCTAGGTGACCCTCCTCCCGAAT ****** ********* ****** ****************** ***************** HS_haplotype1 CACGCTCCAGTGAGTAGCCCAGGGTCGTGAGTGCTGTGCCGTCCCAGCATAGCTGGGCAT HS_assemblymutate CACGCTCCAGTGAGTAGCCCAGGGTCGTGAGTGCTGCGCCGTCCCAGCATAGCTGGGCAT HS_haplotype2 CACGCTCCAGTGAGTAGCCCAGGGTCGTGAGTGCTGCGCCGTCCCAGCATAGCTGGGCAT ************************************ *********************** HS_haplotype1 TTGTAGAGTGATATAGGGACACCCACTGGACCCACCTTTTTAGTAGATTCAGCCTGGCTG HS_assemblymutate TTGTAGAGTGATATAGGGACACCCACTGGACCCACCTTTTTAGTAGATTCAGCCTGGCTG HS_haplotype2 TTGTAGAGTGATATAGGGACACCCACTGGACCCACCTTTTTAGTAGATTCAGCCTGGCTG ************************************************************ HS_haplotype1 CAACGTGCACAGGGACATCTCTATGAGAAGGGGTGGGACTCCACTGGACCCAGGGTCCCA HS_assemblymutate CAACGTGCACAGGGACATCTCTATGAGAAGGGGTGAGACTCCACTGGACCCAGGGTCCCA HS_haplotype2 CAACGTGCACAGGGACATCTCTATGAGAAGGGGTGAGACTCCACTGGACCCAGGGTCCCA *********************************** ************************ HS_haplotype1 CAGGCTGTCTTGTCCCATAGACAGGGCTCTCACCACATCAACTTGCCTGATTAAGAGGCA HS_assemblymutate CAGGCTGTCTTGTCCCATAGACAGGGCTCTCACCACTTCAACTGGCCTGATTAAGAGGCA HS_haplotype2 CAGGCTGTCTTGTCCCATAGACAGGGCTCTCACCACTTCAACTGGCCTGATTAAGAGGCA ************************************ ****** **************** HS_haplotype1 GAGCAAACTAGAGTGCCTTTTCTTGAGCCAGAGTAATAGGCATACTTATCTCATAGGTGA HS_assemblymutate GAGCATACTAGAGTGCCTTTTCTTGAGCCAGAGTAATAGGCATACTTATCTCATAGGTGA HS_haplotype2 GAGCATACTAGAGTGCCTTTTCTTGAGCCAGAGTAATAGGCCTACTTATCTCATAGGTGA ***** *********************************** ****************** HS_haplotype1 AAAAACTCAGCCTCCCAGCTATGACATTCATGAATAAATAAGCAACAGAATGGCTCACTG HS_assemblymutate AAAAACTCAGCCTCCCAGCTATGACATTCATGAATAAATAAGCAACAGAATGGCTCACTG HS_haplotype2 AAAAACTCAGCCTCCCAGCTATGACATTCATGAATAAATAAGCAACAGAATGGCTCACTG ************************************************************ HS_haplotype1 CCTTGTCTGAAGAGGGTAATTGTGGTAGAGGAGTCAGGAGGGTTTCTCCCTCAAAAGAGG HS_assemblymutate CCTTGTCTGAAGAGGGTAATTGTGGTAGAGGAGTCAGGAGGGTTTCTCCCTCAAAAGAGG HS_haplotype2 CCTTGTCTGAAGAGGGTAATTGTGGTAGAGGAGTCAGTAGGGTTTCTCCCACAAAAGAGG ************************************* ************ ********* HS_haplotype1 TGCTTGAGGCATGCTCAATTTGGCACCAGAAGTCAAAAATAAAATAAACAATGTTGAATA HS_assemblymutate TGCTTGAGGCATGCTCAATTTGGCACCAGAAGTCAAAAATAAAATAAACAATGTTGAATA HS_haplotype2 TGCTTGAGGCATGCTCAATTTGGCACCACAAGTCAAAAATAGAATAAACAATGTTGAATA **************************** ************ ****************** HS_haplotype1 ACTGCCAACCCCTTTTCCAGCATGAACATAGTGATAATGGTGCCAGACCCCATAATGGGA HS_assemblymutate ACTGCCAACCCCTTTTCCAGCATGAACATAGTGATAATGGTGCCAGACCCCATAATGGGA HS_haplotype2 ACTGCCAACCCCTTTTCCAGCATGAACATAGAGATAATGGTGCCAGACCCCATAATGGGA ******************************* **************************** HS_haplotype1 CCACGAAGAAACATTGTACTTAACAGTCAATAATCCTAGCTGGAAGAGCTCGCCACACAG HS_assemblymutate CCACGAAGAAACATTGTACTTAACAGTCAATAATCCTAGCTGGAAGAGCTCGCCACACAG HS_haplotype2 CCACAAAGAAACATTGTAGTTAACAGTCAATAATCCTAGCTGGAAGAGCTCGCCACACAG **** ************* ***************************************** HS_haplotype1 TTATGGTGGCTGGGAAACACTTCTCCTTCCTTTTAATTCCGTTACATAAAAAGGTAAAAT HS_assemblymutate TTATGGTGGCTGGGAAACACTTCTCCTTCCTTTTAATTCCGTTACATAAAAAGGTAAAAT HS_haplotype2 TTATGGTGGCTGGGAAACACTTCTCCTTCCTTTTAATTCCGTTACATAAAAAGGTAAAAT ************************************************************ HS_haplotype1 GTAAACCTCTGCTTGAGAAGAAGTACACAAGGT-------GGGTCAACAGTTACTCTTCC HS_assemblymutate GTAAACCTCTGCTTGAGAAGAAGTACACAAGGTGCCCACAGGGTCAACAGTTACTCTTCC HS_haplotype2 GTAAACCTCTGCTTGAGAAGAAGTACACAAGGT-------GGGTCAACAGTTACTCTTCC ********************************* ******************** HS_haplotype1 CTCCAGTGGGCAAGAGACCGCCTGGAGAAATGTCGAATGCATACCTCATTATCATAATGA HS_assemblymutate CTCCAGTGGGCAAGAGACCGCCTGGAGAAATGTCGAATGCATACCTCATTATCATAATGA HS_haplotype2 CTCCAGTGGGCAAGAGACCGCCTGGAGAAATGTCGAATGCATACCTCATTATCATAATGA ************************************************************ HS_haplotype1 TGTGAAATAATATATTGTAGGGGCAAGCCACATGGGAGAGGCGGAGAACGAGTGTGTGCA HS_assemblymutate TGTGACATAATATATAGTAGGGGCAAGCCACATGGGAGAGGCGGAGAACGAGTGTGTGCA HS_haplotype2 TGTGACATAATATATAGTAGGGGGAAGCCACATGGGAGAGGCGGAGAAAGAGTGTGTGCA ***** ********* ******* ************************ *********** HS_haplotype1 GAGTTTCATCACTGATAAATAAATCCCAGTCCCAGCGGGCCCCTCCCCGGGCCTCCAACA HS_assemblymutate GAGTTTCATCACTGATAAATAAATCCCAGTCCCAGCGGGCCCCTCCCCGGGCCTCCAAGA HS_haplotype2 GAGTTTCATCACTGATAAATAAATCCCAGTCCCAGCGGGCCCCTCCCCGGGCCTCCAAGA ********************************************************** * HS_haplotype1 ACCATTGGCTCTCTTAAATGGCGGGCGCGACCAGCCTGGAGAGCTGACAAATTTCATCTT HS_assemblymutate ACCATTGGCTCTCTTAAATGGCGGGCGCGACCAGCCTGGAGAGCTGACAAATTTCATCTT HS_haplotype2 ACCATTGGCTCTCCTAAATGGCGGGCGCGACCAGCCTAGAGAACAGACAAATTTCATCTT ************* *********************** **** * *************** HS_haplotype1 GAGGTTTTGTTGGAATTGAGCAAATACTGGGGATTCACCTCTGAAAGGAAGTTTCAGTGC HS_assemblymutate GAGGTTTTGTTGGAATTGAGCAAATACTGGGGATTCACCTCTGAAAGGAAGTTTCCGTGC HS_haplotype2 GAGGTTTTGATGGAATTGAGCAAATACTGGGGATTCACCTCTGAAAGGAAGTTTCCGTGC ********* ********************************************* **** HS_haplotype1 GCAGGCCTTGTTAGCTTTAGTTGAGATCATGAAAATTTTTATTCATTATCTCATGAATTA HS_assemblymutate GCAGGCCTTGTTATCTTTAGTTGAGATCATGAAAATTTTTATTCATTATCTCATGAATTA HS_haplotype2 GCAGGCCTTGTTATCTTTAGTTGAGATCATGAAAATTATTATTCATTATCTCATGAATTA ************* *********************** ********************** HS_haplotype1 TCTGTCTCTATTCTTTCTTCTGGGGGAGGGCCGTTCATGTCTACCAGCCTGGAATAATTG HS_assemblymutate TCTGTCTCTATTCTTTCTTCTGGGGGAGGGCCGTTCATGTCTACCAGCCTGGAATAATTG HS_haplotype2 TCTGTCTCTATTCTTTCTTCTGGGGGAGGGCCGTTCATTTCTACCAGCCTGGAATAATTG ************************************** ********************* HS_haplotype1 CAATCCTTTTCTATAGCTTCTTGTTTAATCCACTCGGGGCAGAATAATATATAATAACTC HS_assemblymutate CAATCCTTTTCTATAGCTTCTTGTTTAATCCACTCGGGGCAGAATAATATATAATAACTC HS_haplotype2 CAATCCTTTTCTATAGCTTCTTGTTTAATCCACTCGGGGCAGAATAATATATAATAACTC ************************************************************ HS_haplotype1 ATTTAATGGAGTGAGATGCTAAGCTTGCTTGGGCTTGGAAGCGCTGCTCTTGCCATAGCT HS_assemblymutate ATTTAATGGAGTGAGATGCTAAGCTTGCTTGGGCTTGGAAGCGCTGCTCTTGCCATAGCT HS_haplotype2 ATTTAATGGAGTGAGATGCTAAGCTTGCTTTGACTTGGAGGCGCTGCTCTTGCCATAGCT ****************************** * ****** ******************** HS_haplotype1 ATATTTTAAGTTGGCAAAGTGTTATTCTGGGAGGCATACAAGATTTTCATCCCAACTGTA HS_assemblymutate ATATTTTAAGTTGGCAAAGTGTTATTCTGGGAGGCATACAAGATTTTCATCCCAACTGTA HS_haplotype2 ATATTTTAAGTTGTCAAAGTGTTATTCTGGGTGGCATACAAGATTTTCATCCCAAATGTA ************* ***************** *********************** **** HS_haplotype1 AGTGACTCAGCAGAATAACTGGAGGAAAAATAATAAATAATACAGGAAGAGTACCCTGCC HS_assemblymutate AGTGACTCAGCAGAATAACTGGAGGAAAAATAATAAATAATACAGGAAGAGTACCCTGCC HS_haplotype2 AGTGACTCAGCAGAATAACTGGAGGAAAAATAATAAATAATTCAGGAAGAGTACCCTGCC ***************************************** ****************** HS_haplotype1 CAGCACTCCGTCACGGAGTGTCGGCGGACAGTTTGACATTCTAGTAGCTAAATACCCTGC HS_assemblymutate CAGCACTCCGTCACGGAGTGTCGGCGGACAGTTTGACATTCTAGTAGCTAAATACCCTGC HS_haplotype2 CAGCACTCCCTCACGGAGTGTCGGCGGACAGTTTGACATTCTAGTAGCTAAATACCCTGC ********* ************************************************** HS_haplotype1 TTTGGTCCCCGAGAGGATCAGTCTCTCCAGCCTGGGGGGATGCTGGGCAAACATTCACAA HS_assemblymutate TTTGGTCCCCGAGAGGATCAGTCTCTCCAGCCTGGGGGGATGCTGGGCAAACATTCACAA HS_haplotype2 TTTGGTCCCGGAGAGGATCTGTCTCTCCAGCCTGGGGGGATGCTGGGCAAACATTCACAA ********* ********* **************************************** HS_haplotype1 TTGATTGCCTAGGTAATAGCAATCACGCGGCGTGCCATATACATGGCTCTAAATGCTTTG HS_assemblymutate TTGATTGCCTAGGTAATAGCAATCACGCGGCGTGCCATATACATGGCTCTAAATGCTTTG HS_haplotype2 TTTATTGCCTAGGTAATAGCAATCACGCGGCGTGCCATATACATGGCTCTAAATGCTTTG ** ********************************************************* HS_haplotype1 AAAGTATGCTCACTGGAGAACAGGTTAGACCTTTCATTTGCTAGGGATGTGAAAAGTGCA HS_assemblymutate AAAGTATGCTCACTGGAGAACAAGTTAGACCTTTCATTTGCTAGGGATGTGAAAAGTGCA HS_haplotype2 AAAGTATGCTCACTGGAGAACAAGTTAGACCTTTCATTTGCTAGGGATGTGAAAAGTGCA ********************** ************************************* HS_haplotype1 CCTGGAGACCCCCAAACACCTCACAACCTTCCTATTCACGACTTCCCTCAATTTCTGTGC HS_assemblymutate CCTGGAGACCCCCAAACACCTCACAACTTTCCTATTCACGACTTCCCTCAATTTCTGTGC HS_haplotype2 CCTGGAGACCCCCAAACACCTCACAACTTTCCTATTCACGACTTCCCTCAATTTCTGTGC *************************** ******************************** HS_haplotype1 ACTCTTCACCATAATGGCAGAGCAATGGAAAAACTGGCTGCGATTCCATCTTATTTATCA HS_assemblymutate ACTCTTCACCATAATGGCAGAGCAATGGAAAAACTGGCTGAGATTCCATTTTATTTATCA HS_haplotype2 ACTCTTCACCATAATGGCAGAGCAATGGAAAAACTGGCTGAGATTCCATTTTATTTATCA **************************************** ******** ********** HS_haplotype1 TATGCGCACGTACTCAGCACTTCTTCATCAACCCGGGCCACTAGTCTTCTTAAGATCACC HS_assemblymutate TATGCGCACGTACTCAGCACTTCTTCATCAACCCGGGCCACTGGTCATATTAAGATCACC HS_haplotype2 TATGCGCACGTACTCAGCACTTCTTCATCAACCCGGGCCACTGGTCATATTAAGATCACC ****************************************** *** * *********** HS_haplotype1 GCGGAGTCCTTCGCAGCCCTTATCAGACGGGATTGCTGTTCTATGGGAACTTAAGAAAAA HS_assemblymutate GCGGAGTCCTTCCCAGCCCTTATCAGACGGGATTGCTGTTCTATGGGAACTTAAGAAAAA HS_haplotype2 GCGGAGTCCTTCCCAGCCCTTATCAGACGGGATTGCTGTTCTATGGGAACTTAAGAAAAA ************ *********************************************** HS_haplotype1 GGCGTGGGGCGCCTGTTTGCTGCGCTCTGCAGGTAACGTTTGATTGTTTCCCAACCATGA HS_assemblymutate GGAGTGGTGCGCCTCTTTGCTGCGCTCTGCAGGTAACGTTTGCTTGTTTCGCAACCATGA HS_haplotype2 GGAGTGGTGCGCCTCTTTGCTGCGCTCTGCAGGTAACGTTTGCTTGTTTCGCAACCATGA ** **** ****** *************************** ******* ********* HS_haplotype1 GGTTATTTAACATGTGTGCGCAACCTGGGAGCCAAGATTTTAGAGGGCTGTGTTTGAGTG HS_assemblymutate GGTTATTTAACATGTGTGCGCAACCTGGGCGCCAAGATTTTAGAGGGCTGTGTTTGAGTG HS_haplotype2 GGTTATTTAACATGTGTGCGCAACCTGGGCGCCAAGATTTTAGAGGGCTGTGTTTGAGTG ***************************** ****************************** HS_haplotype1 TCGCCACATTGAGTCTTGTGCCTCTCTATTTATCCTGCACCAGGTGGAAGCAGGCTTCTG HS_assemblymutate TCGCCACATTGAGTCTTGTGCCTCTCTATTTATCCTGCACCAGCTGGAAGCAGGCTTCTG HS_haplotype2 TCCCCACATTGAGTCTTGTGCCTCTCTATTTATCCTGCACCAGCTGGAAGCAGGCTTCTG ** **************************************** **************** HS_haplotype1 CAGTAGCCCTTTATTGCTCTGCCACTAGGCCGCCCTCTGTCTGAAGCGTTTTTGTGTACA HS_assemblymutate CAGTAGCCATTTATTGCTCTGCCACTAGGCCGCCCTCTGTCTGAAGCGTTTTTGTGTACA HS_haplotype2 CAGTAGCCATTTATTGCTCTGCCACTAGGCCGCCCTCTGTCTGAAGCGTTTTTGTGTACA ******** *************************************************** HS_haplotype1 AAAAAGGTCCCATCACGGACCTCACTTTTAAGTTAGCTGCCGGGGAATTATGTCTGTTGA HS_assemblymutate AAAAAGGTCCCATCACGGACCTCACTTTTAAGATAGCTGCAGGGGAATTATGTCTGTTGA HS_haplotype2 AAAAAGGTCCCATCACGGACCTCACTTTTAAGATAGCTGCAGGGGAATTATGTCTGTTGA ******************************** ******* ******************* HS_haplotype1 AAGGGATAGAAACCTCCCACAGATTACAGCGGGTCTGCCTGGGTTGCTTGAGTGTAAGGG HS_assemblymutate AAGGGATAGAAACCTCCCACAGATTACAGCGGGTCTGCCTGGGTTGCTTGAGTGAAAGGG HS_haplotype2 AAGGGATAGAAACCTCCCACAGATTACAGCGGGTCTGCCTGGGTTGCTTGAGTGAAAGGG ****************************************************** ***** HS_haplotype1 GACAGGTGAAAACTCTTCCTAGGCTTGTATAAACCAAGGGGAGCCTACGTTTTAAACCCA HS_assemblymutate GACAGGTGAAAACTCTTCCTAGGCTTGTATAAACCAAGGTGAGCCTAGGTTTTGAACCCA HS_haplotype2 GACAGGTGAAAACTCTTCCTAGGCTTGTATAAACCAAGGTGAGCCTAGGTTTTGAACCCA *************************************** ******* ***** ****** HS_haplotype1 TTATTTAAATTTAACACAGGGGTGCGCCCAACATCTCTTTGCTTTTCAAATGTATGATGC HS_assemblymutate TTATTTAAATTTAACACAGGGGTACGCCCAACATCTCTTTGCTTTTCAAATGTATGATGC HS_haplotype2 TTATTTAAATTTAACACAGGGGTACGCCCAACATCTCTTTGCTTTTCAAATGTATGATGC *********************** ************************************ HS_haplotype1 TCCCACCGTGCTGTGAGCTGGAGATAATTCCTGGCCGAGTGCATGATTTCTCAGGAGCTT HS_assemblymutate TCCCACCGTGCTGTGAGCTGCCGATAATTCCTGGCCGAGCGCATGATTTCTCAGGAGCTT HS_haplotype2 TCCCACCGTGCTGTGAGCTGCCGATAATTCCTGGCCGAGCGCATGATTTCTCAGGAGCTT ******************** ***************** ******************** HS_haplotype1 TCCCAGCTACGTGAGTAGCTTGGGGAGGCTCAAGGACAGTGAGAAAGTATTCAAAGTCAT HS_assemblymutate TCCCAGCTACGTGAGTAGCTTGGGGAGGCTCAAGGACAGTGAGAAAGTATTCAAAGTCAT HS_haplotype2 TCCCAGCTACGTGAGTAGCTTGGGGAGGCTCAAGGACAGTGAGAAAGTATTCAAAGTCAT ************************************************************ HS_haplotype1 GTTAGTCAGCCATCCAAGTAAACCTTCTTCTTGGTATAAATAATTCTCTTACTATGGTCT HS_assemblymutate GTTAGTCAGCCATCCAAGTAAACCTTCTTCTTGGTATAAATAATTCTCTTACTATGGTCT HS_haplotype2 GTTAGTCAGCCATCCAAGTAAACCTTCTTCTTGGTATAAACAATTCTCTTACTATGGTCT **************************************** ******************* HS_haplotype1 TTAATGAAAGTCCTTATAGCAAATTTGCTCAGCATTTCAGAAGAGTGCTACTCAGTATCT HS_assemblymutate TTAATGAAAGTCCTTATAGCAAATTTGCTCAGCATTTCAGAAGAGTGCTACTCAGTATCT HS_haplotype2 TTAATGAAAGTCCTCATAGCAAATTTGCTCAGCATTTCAGAAGAGTGCTACTCAGTATCT ************** ********************************************* HS_haplotype1 CAACTAAAAAATAAAATGCTGAGTCCAGGGGTGCCCAGTCCGGACCGGGTTGAATAGGTG HS_assemblymutate CAACTAAAAAATAAAATGCTGAGTCCAGGGGTGCCCAGTCCGGACCGGGTTGAATAGGTG HS_haplotype2 CAACTAAAAAATAAAATGCTGAGTCCAGGGGTGCCCAGTCCGGACCGGGTTGAATAGGTG ************************************************************ HS_haplotype1 AGGGGAGTTTAGATCTCAGCCGAGACTCTTTTAAAGGTCTCAGCCAGCCAGACACTAGAA HS_assemblymutate AGGGGAGTTTAGATCTCAGCCGAGACTCTTTTAAAGGTCTCAGCCAGCCAGACACCAGAA HS_haplotype2 AGGGGAGTCTAGATCTCAGCCGAGACTCTTTTAAAGGTCTCAGCCAGCCAGACACCAGAA ******** ********************************************** **** HS_haplotype1 --AAGACTAGTTCCCTCCGGGTGGTTGATGAAACCCACTGGATGCTTCTAACTAACTTGA HS_assemblymutate ATAAGACTAGTTCCCTCCGGGTGGTTGATGAAACCCACTGGATGCTTCTAACTAACTTGA HS_haplotype2 --AAGACTAGTTCCCTCCGGGTGGTTGATGAAACCCACTCGATGCTTCTAACTAACTTGA ************************************* ******************** HS_haplotype1 AAGACGGCACATTAAAGGGTCTGCAGTGGCCCATGGGAGGACACTGCTCTACAGCCCAGA HS_assemblymutate AAGACGGCACATTAAAGGGTCTGCAGTGGCCCATGGGAGGACACTGCTCTACAGCCCAGA HS_haplotype2 AAGACAGCACATTAAAGGGTCTGCAGTGGCCCATGGGAGGACACTGCTCTACAGCCCAGA ***** ****************************************************** HS_haplotype1 GCGATTCTCACGATTGTTTGATATTTTAGCCTGTGGGTAGAGACAGTAACAAAAGACTTT HS_assemblymutate GCGATTCTCACGATTGTTTGATATTTTAGCCTGTGGGTAGAGACAGTAACAAAAGACTTT HS_haplotype2 GCGATTCTCACGATTGTTTGATATTTTAGCCTGTGGGTAGAGACAGTAAGAAAAGACTTT ************************************************* ********** HS_haplotype1 ATTTACTCATTTTCAATCGCTCTCCACTGCCCACATGGGGAATCATCAGGAGCAGTGAGA HS_assemblymutate ATTTACTCATTTTCAATCGCTCTCCACTGCCCACATGGGGAATCATCAGGAGCAGTGAGA HS_haplotype2 ATTTACTCATTTTCAATCGCTCTCCACTGCCCACATGGGGAATCATCAGGAGCAGTGAGA ************************************************************ HS_haplotype1 TCATACCCAGCCTGTAGAAAGGTAGCAAAGAATGACTTGGCCAATGGAGCTCTCCGCGAG HS_assemblymutate TCATACCCAGCCTGTAGAAAGGTAGCAAAGAATGACTTGGCCAATGGAGCTCTCCGCGAG HS_haplotype2 TCATACCCAGCCTGTAGAAAGGTAGCAAAGAATGACTTGGCCAATGGAGCTCTCCGCGAG ************************************************************ HS_haplotype1 CCACCCCTCTTAAATGATTCATGATCAAGCAGAGGCGGACGGGGCGATCTGCTAAGCAGG HS_assemblymutate CCACCCCTCTTAAATGATTCATGATCAAGCAGAGGCGGACGGGGCGATCTGCTAAGCAGG HS_haplotype2 CCACCCCTCTTAAATGATTCATGATCAAGCAGAGGCGGACGGGGCGATCTGCTAAGCAGG ************************************************************ HS_haplotype1 TCCCAGACCTACTTAAGCTTAATGTATCTGCATCATGCGGGTCTGGGTGTGGACGCCCCA HS_assemblymutate TCGCAGACCTACTTAAGCTTAATGTATCTGCATCATGCGGGTCTGGGTGTGGACGCCCCA HS_haplotype2 TCGCAGAACTACTTAAGCTTAATGTATCTGCATCATGCGGGTCTGGGTGTGGACGCCCCA ** **** **************************************************** HS_haplotype1 GTTAACGAAGTGTAAAAAAGATGGAAGAAGGCTCACTTATGGATATTTGGTTCCCAAACA HS_assemblymutate GTTAACGAAGTGTAGAAAAGATGGAAGAAGGCTCACTTATGGATATTTGGTTCCCAAACA HS_haplotype2 GTTAACGAAGTGTAGAAAAGATGGAAGAAGGCTCACTTATGGATATTTGGTTCCCAAACA ************** ********************************************* HS_haplotype1 AGCATTTCCTCTAACAGTGGACTAATAAAACAAAAGGGCACGAAAGAAATTCTGCCCTCT HS_assemblymutate AGCATCTCCTCTAACAGTGGACTAATAAAACAAAAGGGCACGAAAGAAATTCTGCCCTCT HS_haplotype2 AGCATCTCCTCTAACAGTGGACTAATAAAACAAAAGGGCACGAAAGAAATTCTGCCCTCT ***** ****************************************************** HS_haplotype1 TGCAGTAAGGCTGATGAGTGGGATTACATCACCACAACTTGAATATGTGTGGCTTTTTTG HS_assemblymutate TGCAGTAAGGCTGATGAGTGGGATTACATCACCACAACTTGAATAAGTGTGGCTTTTTTG HS_haplotype2 TGCAGTAAGGCTGATGAGTGGGATTACATCACCACAACTTGAATAAGTGTGGCTTTTTTG ********************************************* ************** HS_haplotype1 GTATATAGTCTTAAATCTTAGGACTCTGTCCACTAAAGCTTTAAAGGAAAATGTAGGGCA HS_assemblymutate GTATATAGTCTTAAATCTTAGGACTCTGTCCACTAAAGCTTTAAAGGAAAATGTAGGGCA HS_haplotype2 GTATATAGTCTTAAATCTTAGGACTCTGTCCACTAAAGCTTTAAAGGAAAATTTAGGGCA **************************************************** ******* HS_haplotype1 TATCTGCAGCGGCTTTTGTTCCTTTAAAAAATCGCTGCAATTCATGTGATCAGACCAGGG HS_assemblymutate TATCTGCAGCGGCTTTTGTTCCTTTAAAAAATCGCTGCAATTCATGTGATCAGACCAGGG HS_haplotype2 TCTCTGCAGAGGCTTTTGTTCCTTTAAAAAATCGCTGCAATTCATGTGATCAGACCAGGG * ******* ************************************************** HS_haplotype1 GCTAATAGGAGGCTGATATGTTGGGTGAAAGAAAAGCTGCAAGGCTCAAACAACTCTAAA HS_assemblymutate GCTAATAGGAGGCTGATATGTTGGGTGAAAGAAAAGCTGCAAGGCTCAAACAACTCTAAA HS_haplotype2 GCTAATAGGAGGCTGATATGTTGGGTGAAAGAAAAGCTGCAAGGCTCAAACAACTCTAAA ************************************************************ HS_haplotype1 GGAGGAAACCCGGAGGCACCATGGCACTAAATATGCTTCCTCTGTTTTTTTTACACATAT HS_assemblymutate GGAGGAAACCCGGAGGCACCATGGCACTAAATATGCTTCCTCTGTTTTTTTTACACATAT HS_haplotype2 GGAGGAAACCTGGAGGCACCAGGGCACTAAATATGCTTCCTCTGTTTTTTTTACACATAA ********** ********** ************************************* HS_haplotype1 ACCGCAGTCATGCCCTTCCTTTTCCTTGCCACCCCCGCCAGAGGACAGGGGTTATCCAGG HS_assemblymutate ACCGCAGTCATGCCCTTCCTTTTCCTTGCCACCCCCGCCAGAGGACAGGGGTTATCCAGG HS_haplotype2 ACCTCAGACATGCCCTTCCTTTTCCTTGCCACCCCCGCCAGAGGACAGGGGTTATCCAGG *** *** **************************************************** HS_haplotype1 CATGACAGGGGCGTTTACCATTTTGGGTGGAACTATTAATGTGAGTTCCAGCCCTACCTA HS_assemblymutate CATGACAGGGGCGTTTACCATTTTGGGTGGAACTATTAATGTGAGTTCCAGCCCTACCTA HS_haplotype2 CATGACAGGGGCGTTTACCATTTTGGGTGGAACTATTAATGTGAGTTCCAGCCCTACCTA ************************************************************ HS_haplotype1 ATGCAAAATGCCCCAGACCTCCCAGAGAGGTTTAAATGAAACTAGCATGGAACATTGCTC HS_assemblymutate ATGCAAAATGCCCCAGACCTCCCAGAGAGGTTTAAAAGAAACTAGCATGGAACATTGCTC HS_haplotype2 ATGCAAAATGCCCCAGACCTCCCAGAGAGGTTTAAAAGAAACTAGCATGGAACATTGCTC ************************************ *********************** HS_haplotype1 AGCCTGTTATATCGTACCATCTCTGTTTTGTTTATCTGAAGCTGGTTATTCTTTAGTATT HS_assemblymutate AGCCTGTTATATCGTACCATCTCTGTTTTGTTTATCTGAAGCCGGTTATTCTTTAGTATT HS_haplotype2 AGCCTGTTATATCGTACCATCTCTGTTTTGTTTATCTGAAGCCGGTTATTCTTTAGTATT ****************************************** ***************** HS_haplotype1 GTATATTGGGCATTGTTCCATCTTTTGTTAGGGCACCGCACTCAGATATGTGCTAATGGG HS_assemblymutate GTATTTTGGGCATTGTTCCATCTTTTGTTAGGGCACTGCACTCAGATCTGTGCTAATGGG HS_haplotype2 GTATTTTGGGCATTGTTCCATCTTTTGTTAGGGCACTGCACTCAGATCTGTGCTAATGGG **** ******************************* ********** ************ HS_haplotype1 AATCATCAGGTGTCCTCTCCACACCCGGAAGCCCTGCTAATAGCAGAGTTCGGAATAATA HS_assemblymutate AATAATCAGGTGTCCTCTCCACACCCGGAAGCCCTGCTAATAGCAGAGTTCGGAATAATA HS_haplotype2 AATAATCAGGTGTCCTCTCCACACCCGGAAGCCCTGCTAATAGCAGAGTTCGGAATAATA *** ******************************************************** HS_haplotype1 AATCCTGAGAAATATGAACCACATCAGAGGAACCCCCCTCCTCTCGTACATTTGTAGCAA HS_assemblymutate AATCCTGAGAAATATGAACCACATCAGAGGAACCCCCCTCCTCTCGTACATTTGTAGCAA HS_haplotype2 AATCCTGAGAAATATGAACCACATCAGAGGAACCCCCCTCCTCTCGTACATTTGTAGTAA ********************************************************* ** HS_haplotype1 CAATATGAAGGATGGCGAAATCCCAGGTCACATAACCCTGGGGCCTAAAAAAACCCTGGA HS_assemblymutate CAATATGAAGGATGGCGAAATCCCAGGTCACATAACCCTGGGGCCTAAAAAAACCCTGGA HS_haplotype2 CAATATGAAGGATGGCGAAATCCCAGGTTACATAACCCTGGGGCCTAAAAAAACCCCGGA **************************** *************************** *** HS_haplotype1 TTTACTTTTCATCATTAAAAACAAGCCCTCCACACACATTTATAGGGCAAACATGCTTTT HS_assemblymutate TTTACTTTTCATCATTAAAAACAAGCCCTCCACACACATTTATAGGGCAAACATGCTTTT HS_haplotype2 TTTACTTTTCATCATTAAAAACAAGCCCTCCACACACATTTATAGGGCAAACATGCTTTT ************************************************************ HS_haplotype1 TTTAGTCGATGGCATACTGGGAACCATTTATTCTGTCAACTGATTTTATATGGGGTGCTG HS_assemblymutate TTTAGTAGATGGCATACTGGGAAGCATTTATTCTGTCAACTGATTTTATATGGGGTGCTG HS_haplotype2 TTTAGTAGATGGCATACTGGGAAGCATTTATTCTGTCAACTGATTTTATATGGGGTGCTG ****** **************** ************************************ HS_haplotype1 AGTGTCCCAAGCTCTTGGCCACTGTGCTAGAACACACCCCTCATCGTCTTGGGGTTAGGA HS_assemblymutate AGTGTCCCAAGCTCTTAGCCACTGTGCTAGAAGACACCCCTCCTCGTCTTGGGGTTAGGA HS_haplotype2 AGTGTCCCAAGCTCTTAGCCACTGTGCTAGAAGACACCCCTCCTCGTCTTGGGGTTAGGA **************** *************** ********* ***************** HS_haplotype1 CATATGTACAAGGTGTTGAACTAGGAGCTTTTCTTACTTGTTTCCGACCAGCGCATTGCT HS_assemblymutate CATATGTACAAGGTGTTGAACTAGGAGCTTTTCTTACTTGTTTTCGACCAGCGCATTGCT HS_haplotype2 CATATGTACAAGGTGTTGAACTAGGAGCTTTTCTTACTTGTTTTCGACCAGCGCATTGCT ******************************************* **************** HS_haplotype1 TTATCTTGTGTTCAGGCTGCTTCTATATTTTACTCGCTTGTTCGAAGACTAAACCTCGTG HS_assemblymutate TTCTCTTGTGTTCAGGCTGCTTCTATATTTTACTCGCTTGTTCGAAGACTAAACCTCGCG HS_haplotype2 TTCTCTTGTGTTCAGGCTGCTTCTATATTTTACTCGCTTGTTCGAAGACTAAACCTCGCG ** ******************************************************* * HS_haplotype1 GGACAAAAATCAGGCCGCGCCCGACCTCCGGTCTCTCGTTTTTAATTCTAAGGGATTATA HS_assemblymutate GGACAAAAATCAGGCCGCGCCCGACCTCCGGTCTCTCATTTTTAATTCTAAGGGCTTATA HS_haplotype2 GGACAAAAATCAGGCCGCGCCCGACCTCCGGTCTCTCATTTTTAATTCTAAGGGCTTATA ************************************* **************** ***** HS_haplotype1 TACTCAGAGGAATGCACTGCAAGAGGCAGAGGGAGGAAGTGCCACAGTCTTGAGAATCTG HS_assemblymutate TACTCAGAGGAATGCACTGCAAGAGGCAGAGGGAGGAAGTGCCACAGTCTTGAGAATCTG HS_haplotype2 TACTCAGAGGAATGCACTGCAAGAGGCAGAGGGAGGAAGTGCCACAGTCTTGAGAATCTG ************************************************************ HS_haplotype1 CCCCCGTTCACCACTTTTGATGTAACCTGTCCCCAGAGCAGAGAAGATCATCCGCTCTTC HS_assemblymutate CCCCCGTTCACCACTTTTGATGTAACCTGTCCCCAGAGCAGAGAAGATCATCCGCTCTTC HS_haplotype2 CACCCGTTCACCACTTTTGATGTAACCTGTCCCCAGAGCAGAGCAGATCATCAGCTCTTC * ***************************************** ******** ******* HS_haplotype1 GCCTCATCTTTGGATTTGTGAAACCAGTTCTGGGATTAGGAAAACTCAGCTGGAATCTTT HS_assemblymutate GCCTCATCTTTGGATTTGTGAAACCAGTTCTGGGATTAGGAAAACTCAGCTGGAATCTTT HS_haplotype2 GCCTCATCTTTGGATTTGTGAAACCAGTTCTGGGATTAGGAAAACTCAGCTGGAATCTTT ************************************************************ HS_haplotype1 GGTTTACAGCCCTCCCCACCTAGGTGTACATACTACAACTGACTTATCTGGGTTCGAGTT HS_assemblymutate GGTTTACAGCCCTCCCCACATAGGTGTACATACTACAACTGACTTATCTGGGTTCGAGTT HS_haplotype2 GGTTTACAGCCCTCCCCACATAGGTGTACATACTACAACTGACTTATCTGGGTTCGAGTT ******************* **************************************** HS_haplotype1 ATAAATGGGACAAAATTACGAAAGAAAAAGTTAAAACCATTGATTACACAGGGAAACAGA HS_assemblymutate ATAAATGGGACAAAATTACGAAAGAAAAAGTTAAAACCATTGATTACACAGGGAAACAGT HS_haplotype2 ATAAATGGGACAAAATTACGAAAGAAAAAGTTAAAACCATTGATTACACAGGGAAACAGT *********************************************************** HS_haplotype1 GCAACCTCTGATAACCTCTCCCCCACTTATCAGTTCAACCTGTAAGAAGGATGGGGCGGA HS_assemblymutate GCAACCTCTGATAACCTCTCCCCCACTTTTCAGTTCAACCTGTAAGAAGAATGGGGCGGA HS_haplotype2 GCAACCTCTGATAACCTCTCCCCCACTTTTCAGTTCAACCTGTAAGAAGAATGGGGCGGA **************************** ******************** ********** HS_haplotype1 TTCAGCCTTGGCGCAGTTTTCAGGAAGGCCTCTATGGGAAGGGTTAGGGGTTCTGTTGTA HS_assemblymutate TTCAGCCTTGGCGCAGTTTTCAGGAAGGCCTCTATGGGAAGGGTTAGGGGTTCTGTTGTA HS_haplotype2 TTCAGCCTTGGCGCAGTTTTCAGGAAGGCCTCTATGGGAAGGGTTAGGGGTTCTGTTGTA ************************************************************ HS_haplotype1 AAAATGGAAATTTAGAACCTCCTAACAGACTCACTTCCCTTCTAGAAATCCAATATATTC HS_assemblymutate AAAATGGAAATTTAGAATCTCCGAACAGACTCACTTCCCTTCTAGAAATCCAATATATTC HS_haplotype2 AAAATGGAAATTTAGAATCTCCGAACAGTCTCACTTCCCTTCTAGAAATCCAATATATTC ***************** **** ***** ******************************* HS_haplotype1 TAGTGTTTCTCCTGGAGGCTGCCCAGGAGCTAAAAGCCTAAAGAATCCCAAGAAGAGCAT HS_assemblymutate TAGTGTTTCTCCTGGAGGCTGCCCAGGAGCTAAAAGCCTAAAGAATCCCAAGAAGAGCAT HS_haplotype2 TAGTGTTTCTCCTGGATGCTGCCCAGTAGCTAAAAGCCTAAAGAATCCCAAGAAGAGCAT **************** ********* ********************************* HS_haplotype1 AATCCTGGTAGTATTTACATACAGGTCAGCCAACCTCGTCAAGGCATAGGAGGAGTATAT HS_assemblymutate AATCCTGGTAGTATTTACATACAGGTCAGCCAACCTCGTCAAGGCATAGGAGGAGTATAT HS_haplotype2 AATCCTGGTAGTATTTACATACAGGTCAGCCAACCTCGTCAAGGCATAGGAGGAGTATAT ************************************************************ HS_haplotype1 ACAAAAGACAAATCACCATTGAATTTTCTGCCCAGGGGAATTTGAGATATTATAGTTTTC HS_assemblymutate ACAAAAGACAAATCACCATTGAATTTTCTGCCCAGGGGAATTTGAGATATTATAGTTTTC HS_haplotype2 ACAAAAGACAAATGACCATTGAATTTTCTGCCCAGGGGAATTAGAGATATTATAGTTTTC ************* **************************** ***************** HS_haplotype1 TTGAAACATATCGCGGGGCTGGGATTTTAAACATGACAATGGCTGGTCCCTGGGCTTCAC HS_assemblymutate TTGAAACATATCGCGGGGCTGGGATTTTAAACATGACAATGGCTGTTCCCTGGGCTTCAC HS_haplotype2 TTGAAAAATATCGCGGGGCTGGGATTTTAAACATGACAATGGCTGTTCCCTGGGCTTCAC ****** ************************************** ************** HS_haplotype1 CATATGCTCTGAATCTTATGGTCTTGGTGCCTGGGCTATAATTTTGACAGGAAGCTATAA HS_assemblymutate CATATGCTCTGAATCTTATGGTCTTGGTGCCTGGGCTATAATTTTGACAGGAAGCTATAA HS_haplotype2 CATATGCTCTGAATCTTATGGTCTTGGTGCCTGGGCTATAATTTTGACAGGAAGCTATAA ************************************************************ HS_haplotype1 ACGAAGCCAGGGCACGGCAAAATACTTTTGACTACATAAAAGTTATTCAGGAACAGGCCT HS_assemblymutate ACGAAGCCAGGGCACGGCAAAATACTTTTGACTACATAAAAGTTATTCAGGAACAGGCCT HS_haplotype2 ACGAAGCCAGGGCACGGCAAAATACTTTTGACTACATAAAAGTTATTCAGGAACAGGCCT ************************************************************ HS_haplotype1 TCCCCAAAGTCTGCTCCCATTGACCCTGTTATTGGCCTCAGCTCCTCATGAGCAGCTTCT HS_assemblymutate TCCCCAAAGTCTGCTCCCATTGACCCTGTTATTGGCCTCAGCTCCTCATGAGCAGCTTCT HS_haplotype2 TCCCCAAAGTCTGCTCCCATTGACCCTGTTATTGGCCTCAGCTCCTCATGAGCAGCTTCT ************************************************************ HS_haplotype1 ACACTAGAAAGTCCTGGCTGGAACGTTGGTTTTTCCACCGTGCTTATATGACGAGAGTGG HS_assemblymutate ACACTAGAAAGTCCTGGATGGAACGTTGGTTTTTCCACCGTGCTTATATGACGAGAGTGG HS_haplotype2 ACACTAGAAAGTCCTGGATGGAACGTTGGTTTTTCCACCGTGCTTATATGACGAGAGTGG ***************** ****************************************** HS_haplotype1 CATGGTTGTTCTCCCCTCAGAAATCTCACTGAAACCTGGCATGAATATATATATGGAATA HS_assemblymutate CATGGTTGTTCTCCCCTCAGAAATTTCACTGAAACCTGGCATGAATATATATATGGAATA HS_haplotype2 CATGGTTGTTCTCCCCTCAGAAATTTCACTGAAACCTGGCATGAATATATATATGGAATA ************************ *********************************** HS_haplotype1 GAGATATAGCCATGTTGGTGATTCAAAATTAAGGACCAGGAAGACGCCTGGGAAGCTGGA HS_assemblymutate GAGATATAGCCATGTTGGTGATTCAAAATTAAGGACCAGGAAGACGCCTGGGAAGCTGGA HS_haplotype2 GAGATATAGCCATGTTGGTGATTCAAAAATAAGGACCAGGAAGACGCCTGGGAAGCTGGA **************************** ******************************* HS_haplotype1 AGAATCGTGGGCGGAAGTAGCTGGATATGATCAGAGAACTGCAACCTTTGAATCAAAATA HS_assemblymutate AGAATCGTGGGCGGAAGTAGCTGGATATGATCAGAGAACTGTAACCTTTGAATCAAAATA HS_haplotype2 AGAATGGTGGGCGGAAGTAGCTGGATATGATCAGAGAACTGTAACCTTTGAATCAAAATA ***** *********************************** ****************** HS_haplotype1 AACAGTTTTAGTCTGGCTCTCTAGCCTGGGATTCCACAGATCACAGCATTCAGTTATGAT HS_assemblymutate AACAGTTTTAGTCTGGCTCTCTAGCCTGGGATTCCACAGATCACAGCATTCAGTTATGAT HS_haplotype2 AACAGTTTTAGTCTGGCTCTCTAGCCTGGGATTCCACAGATCACAGCATTCAGTTATGAT ************************************************************ HS_haplotype1 GGCTACATAACAAAAAGAAGGGTTCCTATCAGGCCACAGGTATATCTCTGCGCCACCAAA HS_assemblymutate GGCTACATAACAAAAAGAAGTGCTCCTATCAGGCCACAGATATATCTCTGCGCCACCAAA HS_haplotype2 GGCTACATAACAAAAAGAAGTGCTCCTATCAGGCCACAGATATATCTCTGCGCCACCAAA ******************** * **************** ******************** HS_haplotype1 ACTTCCAGGGTGTGAGCCGCCGCGGGCCCCCAGAAGTCTGGAGAAAAATCCATCATCTTT HS_assemblymutate ACTTCTAGGGTGTGAGCCGCCGCGGGCCACCAGAAGTCTGGAGAAAAATCCATCATCTTT HS_haplotype2 ACTTCTAGGGTGTGAGCCGCCGCGGGCCACCAGAAGTCTGGAGAAAAATCCATCATCTTT ***** ********************** ******************************* HS_haplotype1 AT-TTCTCACTGCTGCTAGTCGGGATTTCAGGAGCGCCCTGGCTCCATTTAAATTAGATG HS_assemblymutate ATCTTCTCACTGCTGCTAGTCGGGGTTTCAGGAGCGCCCTGGCTCCACTTTAATTAGATG HS_haplotype2 AT-TTCTCACTGCTGCTAGTCGGGGTTTCAGGAGCGCCCTGGCTCCACTTTAATTAGATG ** ********************* ********************** ** ********* HS_haplotype1 CTTTGGTGGTGTCTCTTGATGTTTCATTAAAGAGGATCAGCCTGTTTGCTTCCAGCAGGT HS_assemblymutate CTTTGGTGGTGTCTCTTGATGTTTCATTAAAGAGGATCAGCCTGTTTGCTTCCAGCAGGT HS_haplotype2 CTTTGGTGGTGTCTCTTGATGTTTCATTAAAGAGGATCAGCCTGTTTGCTTCCAGCAGGT ************************************************************ HS_haplotype1 GCAGTGAAACTTTGAACTCATTTTACCGCTGGACACTTAACACTAGGCCGCACGTCAGAG HS_assemblymutate GCAGTGAAACTTTGAACTCATTTTACCGCTGGACACTTAACACTAGGCCGCACGTCAGAG HS_haplotype2 ACAGTGAAACTTTGAACTCATTTTACCGCTGGACACTTAACACTAGGCCGCACGTCAGAG *********************************************************** HS_haplotype1 GAAATGATCCAACCCGGTAGGTCATGCTTGCATTATATCACAAAAGCTCCTCAAAATAAC HS_assemblymutate GAAATGATCCAACCCGGTAGGTCATGCTTGCATTATATCACAAAAGCTCCTCAAAATAAC HS_haplotype2 GAAATGATCCAACCCGGTAGGTCATGCTTGCATTATATCACAAAAGCTCCTCAAAATAAC ************************************************************ HS_haplotype1 CAAAGGAGAGACAGTCATGTTCACCCAGGAGTTAAATGCCTGATGACTTTGGCCTTTTTC HS_assemblymutate CAAAGGAGAGACAGTCATGTTCACCCAGGAGTTAAATGCCTGATGACTTTGGCCTTTTTC HS_haplotype2 CAAAGGAGAGACAGTCATGTTCACCCAGGAGTTAAATGCCTGATGACTTTGGCCTTTTTC ************************************************************ HS_haplotype1 TTATGGTGGAACACGTTTCAAGCAATGCCCACTGCTCTGTACCAGGCTCCAGGGATTTTT HS_assemblymutate TTATGGTGGAACACGTTTCAAGCAATGCACACTGCTCTGTACCAGGCTCCAGGGATTTTT HS_haplotype2 TTATGGTGGAACACGTTTCAAGCAATGCACACTGCTCTGTACCAGGCTCCAGGGATTTTT **************************** ******************************* HS_haplotype1 AAATACCCCACAGAATCTATCAATACTAGAACAGAGTAGGGGAAACACATCAGAAATTTC HS_assemblymutate AAATACCCCACAGAATCTATCAATACTAGAACAGAGTAGGGGAAACACATCAGAAATTTC HS_haplotype2 AAATACCCCACAGAATCTATCAATACTAGAACAGAGTAGGGGAAACACATCAGAAATTTC ************************************************************ HS_haplotype1 TCATCCTTTATGTGAAACTCGGCTTGAATTTGTGGTGATGTCTGATCTGGTGTGTTGCTA HS_assemblymutate TCATCCTTTATGTGAAACGCGGCTTGAATTTGTGGTGATGTCTGATCTGGTGTGTTGCTA HS_haplotype2 TCATCCTTTATGTGAAACGCGGCTTGAATTTGTGGTGATGTCTGATCTGGTGTGTTCCTA ****************** ************************************* *** HS_haplotype1 AACCAGCTACTCACTTCAATCTG-TTATTTTGAAACATAAGATGAGCTGGGTTTTAAGTC HS_assemblymutate AACCAGCTACTCACTTCAATCTGTTTATTTTGAAACATAAGATGAGCTGGGTTTTAAGAC HS_haplotype2 AACCAGCTACTCACTTCAATCTG-TTATTTTGAAACATAAGATGAGCTGGGTTTTAAGAC *********************** ********************************** * HS_haplotype1 TGTGTGTCCCTCCTGTGGGGTCTCTCTGCAGGAATGAAGTTACCCTCCTTCCTTCTTAGG HS_assemblymutate TGCGTGTCCCTCCTGTGGGGTCTCTCTGCAGGAATGAAGTTACCCTCCTTACTTCTTAGG HS_haplotype2 TGCGTGTCCCTCCTGTGGGGTCTCTCTGCAGGAATGAAGTTACCCTCCTTACTTCTTAGG ** *********************************************** ********* HS_haplotype1 TTGAACATAAAAAATGCCACCTGGGAGGCGTGAGCGTGGATTAGCCACGTCCTCCTACAA HS_assemblymutate TTGAACATAAAAAATGCCACCTGGGAGGCGTGAGCGTGGATTAGCCACGTCCTCCTATAA HS_haplotype2 TTGAACATAAAAAATGCCACCTGGGAGGCGTGAGCGTGGATTAGCCACGTCCTCCTATAA ********************************************************* ** HS_haplotype1 AATGAGATTCCAGCATTTTTAATAATATGAGGCTGGGGCCTAGGCGCGGTAAGGCTATCC HS_assemblymutate AATGAAATTCCAGGATTTTGAATAATATGAGGCTGGGGCCTACGCGCGGTAAGGCTATCC HS_haplotype2 AATGAAATTCCAGGATTTTGAATAATATGAGGCTGGGGCCTACGCGCGGTAAGGCTATCC ***** ******* ***** ********************** ***************** HS_haplotype1 TTAATTTCGATGACCCCAGCAAAAGGTGCCTAGATATCTCCCAGGTCAGCCTGACAGCTG HS_assemblymutate TTAATTTCGATGACCCCAGCAAAAGGTGCCTAGATATCTCCCAGGTCAGCCTGACAGCTG HS_haplotype2 TTAATTTCGATGACCCCAGCAAAAGGTGCCTAGATATCTCCCAGGTCAGCCTGACAGCTG ************************************************************ HS_haplotype1 CACACCAGCTGTGCTGTTTTTGTTGTTTGTACCTTGAAAGCACTTGCAGAAAGACAGAAT HS_assemblymutate GACACCAGCTGTGCTGTTTTTGTTGTTTGTACCTTGAAAGCACTTGCAGAAAGACAGAAT HS_haplotype2 GACACCAGCTGTGCTGTTTTTGTTGTTTGTACCTTGAAAGCACTTGCAGAAAGACAGAAT *********************************************************** HS_haplotype1 ATAGGGGGATGGCTAGGCTGTTTGTCACACACTAGTGCATGCCTGGCCTAAAAATGCCTG HS_assemblymutate ATAGGGGGATGGCTAGGCTGTTTGTCACACACTAGTGCATGCCTGGCCTAAAAATGCCTG HS_haplotype2 ATAGGGGGATGGCTAGGATGTTTGTCACACACTAGTGCATGCCTGGCCTAAAAATGCCTG ***************** ****************************************** HS_haplotype1 ATTCTCCCGGGCATCTGAAAGCAGTTTTTTGTACCCCTTACTACTCTCGGCGAGGTAGCA HS_assemblymutate ATTCTCCCGGGCATCTGAAAGCAGTTTTTTGTACCCCTTACTACTCTCGGCGAGGTAGCA HS_haplotype2 ATTCTCCCGGGCATCTGAAAGCAGTTTTTTGTACCCCTTACTACTCTCGGCGAGCTAGCA ****************************************************** ***** HS_haplotype1 CTGCTCCTGTCCTGTAAACATTTTAAGTAAGGCATGGGGGAGGA-------TGGGAGCAG HS_assemblymutate CTGCTCCTGTCCTGTAAACATTTTAAGTAAGGCATGGGGGAGGACAGAATCTGGGAGCAG HS_haplotype2 CTGCTCTTGTCCTGTAAACATTTTAAGTAAGGCATGGGGGAGGA-------TGGGAGCAG ****** ************************************* ********* HS_haplotype1 AAGCCCACATAAGGCGCGCGCCTTACCTTCAATCCCAGGCCAGAGACAAGAGGATGTGTG HS_assemblymutate AAGCCCACATAAGGCGCGCGCCTTACCTTCAATCCCAGGCCAGAGACAAGAGGATGTGTG HS_haplotype2 TAGCCCACATAAGGCGCGCGCCTTACCTTCAATCCCAGGCCAGAGACAAGAGGATGTGTG *********************************************************** HS_haplotype1 TTAAGTCACTTTTTATTTTATTCATTGGTGTCAACAGCAGATTCTTCCTATGTGGGGAGT HS_assemblymutate TTAAGTCACTTTTTATTTTATTCATTGGTGTCAACAGCAGATTCTTCCTATGTGGGGAGT HS_haplotype2 TTAAGTCACTTTTTATTTTATTCATTGGTGTCAACAGCAGATTCTTCCTATGTGGGGCGT ********************************************************* ** HS_haplotype1 GGCGTGAGAGAAATATGGGATTATAGGCTCACCCTGTAGTCCAAAGTTTCATTAATCCTT HS_assemblymutate GGCGTGAGAGAAATATGGGATTATAGGCTCACCCTGTAGTCCAAAGTTTCATTAATCCTT HS_haplotype2 GGCGTGAGAGAAATATGGGATGATAGGCTCACCCTGTAGTCCAAAGTTTCATTAATCCTT ********************* ************************************** HS_haplotype1 TACTAGTAGCTACTGCCTTCTTCAGAGCTGGTGAAGTGAGTAGGAGCTAATAACTCCACA HS_assemblymutate TACTAGTAGCTACTGCCTTCTTCAGAGCTGGTGAAGTGAGTAGGAGCTAATAACTCCACA HS_haplotype2 TACTAGTAGCTACTGCCTTCTTCAGAGCTGGTCAAGTGAGTAGGAGCTAATAACTCCACA ******************************** *************************** HS_haplotype1 TATTTTTTAATTTTCTCAGAAGTTGAAATCTCAAGTCCGTGACCCTCTCCATAAGAAAAA HS_assemblymutate TATTTTTTAATTTTCTCAGAAGTTGAAATCTCAAGTCCGTGACCCTCTCCATAAGAAAAA HS_haplotype2 TATTTTTTAATTTTCTCAGAAGTTGAAATCTCAAGTCCGTGACCCTCTCCATAAGAAAAA ************************************************************ HS_haplotype1 GTGGCAGACTAGGTGCATAGATATATTGGAAAAATAAATGAGACAGATGAGCCAAAATGA HS_assemblymutate GTGGCAGACTAGGTGCATAGATATATTGGAAAAATAAATGAGACAGATGAGCCAAAATGA HS_haplotype2 GTGGCAGACTAGGTGCATAGATATATTGGAAAAATAAATGAGACAGATGAGCCAAAATGA ************************************************************ HS_haplotype1 TGTGTCCATCAGTGTTCTGTTAAGAAACCTTCCTTACCAAGCTAAAAACTGGTGATGATC HS_assemblymutate TGTGTCCATCAGTGTTCTGTTAAGAAACCTTCCTTACCAAGCGAAAAACTCGTGATGATC HS_haplotype2 TGTGTCCATCAGTGTTCTGTTAAGAAACCTTCCTTACCAAGCGAAAAACTCGTGATGATC ****************************************** ******* ********* HS_haplotype1 ACAATGACCCTATGGTGGGGTTTACAGGTATGAGACCAAAATTCACCAGACCAGGGGAAG HS_assemblymutate ACAATGGCCCTATGGTGGGGTTTACAGGTATGAGACCAAAATTCACCAGACCAGGGGAAG HS_haplotype2 ACAATGGCCCTATGGTGGGGTTTACAGGTATGAGACCAAAATTCACCAGACCAGGGGAAG ****** ***************************************************** HS_haplotype1 AATCTTGGGAC-AAATTTCCCAGCTCTAGCTGGTAAATGCTGGTTCCAACTGATCGAGAT HS_assemblymutate AATCTTGGGACAAAATTTCCCAGCTCTAGCTGGTAAATGCTGGTTCCAACTGATCGAGAT HS_haplotype2 AATCTTGGGAC-AAATTTCCCAGCTCTAGCTGGTAAATGCTGGTTCCAACTGATCGAGAT *********** ************************************************ HS_haplotype1 ATAAAGAATAGGTTCTGTTTCATTTCATACAAAAAAGTTGATGACAATCCTTTTTTGTAT HS_assemblymutate ATAAAGAATAGGTTCTGTTTCATTTCATACAAAAAAGTTGATGACAATCCTTTTTTGTAT HS_haplotype2 ATATAGAATAGGTTCTGTTTCATTTCATACAAAAAAGTTGATGACAATCCTTTTTTGTAT *** ******************************************************** HS_haplotype1 ACTTTCCTTCTTTGAATTAGAAGCTGACCCTCAAGTAATATCACCGTATATTCTTTTTCT HS_assemblymutate ACTTTCCTTCTTTGAATTAGAAGCTGACCCTCAAGTAATATCACCGTATATTCTTTTTCT HS_haplotype2 ACTTTCCTTCTTTGAATTAGAAGCTGACCCTCAAGTAATATCACCGTATATTCTTTTTCT ************************************************************ HS_haplotype1 AAATTGAGTTTGACTGTATTGAAAGAGATTTTACAGACTCAGCTAAGAAGCTCAAGTGGG HS_assemblymutate AAATTGAGTTTGATTGTATTGAAAGAGATTTTACAGACTCAGCTAAGAAGCTCAAGTGGG HS_haplotype2 AAATTGAGTTTGATTGTATTGAAAGAGATTTTACAGACTCAGCTAAGAAGCTCAAGTGGG ************* ********************************************** HS_haplotype1 AATGAGATGGGATCATTAGGAGTTATAGCCAGTTGAGCGATGGTGTTAGGCAGTCAGGGA HS_assemblymutate AATGAGATGGGATCATTAGGAGTTATAGCCAGTTGAGCGATGGTGTTAGGCAGTCAGGGA HS_haplotype2 AATGAGATGGGATCATTAGGAGTTATAGCCAGTTGAGCGATGGTGTTAGGCAGTCAGGGA ************************************************************ HS_haplotype1 GGATGGGGTGCTGGGCAGGAATGGCAATATTGTTGATGACAAGTTATGAAACAAAGTTTG HS_assemblymutate GGATGGGGTGCTGGGCAGGAATGGCAATATTGTTGATGACAAGTTATGAAACAAAGTTTG HS_haplotype2 GGATGGGGTGCTGGGCAGGAATGGCAATATTGTTGATGACAAGTTATGAAACAAAGTTTG ************************************************************ HS_haplotype1 GGAAAGGATGGAGGCAAACAGTCTAATGGTCTCAGCCTGCATGAGCTTTCTCAGCTGACG HS_assemblymutate GGAAAGGATGGAGGCAAATAGTCTAATGGTCTCATCCTGCATGAGCTTTCTCAGCTGACG HS_haplotype2 GGAAAGGATGGAGGCAAATAGTCTAATGGTCTCATCCTGCATGAGCTTTCTCAGCTGACG ****************** *************** ************************* HS_haplotype1 AATTCCGATCTGGCTTGGTTTTAAACAGGCTGAGCAGGTGCCAGCCTCCGCGTCGTACTG HS_assemblymutate AATTCCGATCTGGCTTGGTTTTAAACAGGCTGAGCAGGTGCCAGCCTCCGCGTCGTACTG HS_haplotype2 AATTCCGATCTGGCTTGGTTTTAAACAGGCTGAGCAGGTGCCAGCCTCCGCGGCGTACGG **************************************************** ***** * HS_haplotype1 AAACCTTTTTATCTAACTGTGTACTGTGGGGACCCTGGGAGGGTTTTGACCTTGAGGCAA HS_assemblymutate AAACCTTTTTATCTAACTGTGTACTGTGGGGACCCTGGGAGGGTTTTGACCTTGAGGCAA HS_haplotype2 AAACCTTTTTATCTAACTGTGTACTGTGGGGACCCTGGGAGGGTTTTGACCTTGAGGCAA ************************************************************ HS_haplotype1 ATCAGCCTCTCCCAGCCCACTGCACCCAATATGACTGAGATCGTTGAAGCAAAACATGAC HS_assemblymutate ATCAGCCTCTCCCAGCCCACTGCACCCAATATGACTGAGATCGTTGAAGCAAAACATGAC HS_haplotype2 ATCAGCCTCTCCCAGCCCACTGCACTCAATATGACTGAGATCGTTGAAGCAAAACATGAC ************************* ********************************** HS_haplotype1 GAATAAATAGTTGGGAGCTCGTCTTTCCTGAATATAGCATTCTCTTTGTTTATTAGATAC HS_assemblymutate GAATAACTAGTTGGGAGCTCCTCTTTCCTGAATATAGCATTCTCTGTGTTTATTAGATAC HS_haplotype2 GAATAACTAGTTGGGAGCTCCTCTTTCCTGAATATAGCATTCTCTGTGTTTATTAGATAC ****** ************* ************************ ************** HS_haplotype1 CATATTAGCAGGAGAAGGGCCCCGTCCAGCTGAGGAGGTGCCAATTACATTGCCAAAAGA HS_assemblymutate CATATTAGCAGGAGAAGGGCCCCGTCCAGCTGAGGAGGTGCCAATTACATTGCCAAAAGA HS_haplotype2 CATATTAGCAGGAGAAGGGCCCCGTCCAGCTGAGGAGGTGCCAATTACATTGCCAAAAGA ************************************************************ HS_haplotype1 CAGGTGTGGTTGCCCAATTCTAAAAGCCCGTCCTTCTCTACTCCTGGTATATGCTTTAGG HS_assemblymutate CAGGTGTGGTTGCCCAATTCTAAAAGCCCGTCCTTCTCTACTCCTGGTATATGCTTTAGG HS_haplotype2 CAGGTGTGGTTGCCCAATTCTAAAAGCCCGTCCTTCTCTACTCCTGGTATATGCTTTAGG ************************************************************ HS_haplotype1 CTGCTCTGGGTATACACACACTGTGGAAGCTCAGCCTTCCCAGAACTCCCAGCCCCTGAA HS_assemblymutate CTGCTCTGGGTATACACACACTGTGGAAGCTCAGCCTTCCCAGAACTCCCAGCCCCTGAA HS_haplotype2 CTGCTCTGGGTATACACACACTGTGGAAGCTCAGCCTTCCCAGAACTCCCAGCCCCTGAA ************************************************************ HS_haplotype1 CGTGTCTCCACACAAGACCTTAACCGTGGTTGCTATCTCTGTTCTGTGGAATCCCTTCGT HS_assemblymutate CGTGTCTCCACACAAGACCTTAACCATGGTTGCTATCTCTGTTCTGGGGAATCCCTTCGT HS_haplotype2 CGTGTCTCCACACAAGACCTTAACCATGGTTGCTATCTCTGTTCTGGGGAATCCCTTCGT ************************* ******************** ************* HS_haplotype1 TAAACTGCAACACTTTGCCCGGGTCTGAGAGGCTGGCAATTCAGACTCTCTATAGTCCTA HS_assemblymutate TAAACTGCAACACTTTGCCCGGGTCTGAGAGGCTGGCAATTCAGACTCTCTATAGTCCTA HS_haplotype2 TAAACTGCAACACTTTGCCCGGGTCTGAGAGGCTGGCAATTCAGACTCTCTATAGTCCTA ************************************************************ HS_haplotype1 ATCATGACCTGGCCGGGCCCGTCCACCTCAAGTTAATTGCCCGCACGGGTGG---TCAAG HS_assemblymutate ATCATGACCTGGCCGGGCCCGTCCACCTCAAGTTAATTGCCCGCACGGGTGGTTCTCAAG HS_haplotype2 ATCATGACCTGGCCGGGCCCGTCCACCTCAAGTTAATTGCCCGCACGGGTGG---TCAAG **************************************************** ***** HS_haplotype1 CATTGAAATTTATGTCTCTTCTTAAACTCCCTGACAATAAACATGGTGTGGAAGCTCTAG HS_assemblymutate TATTGAAATTTATGTCTCTTCTTAAACTCCCTGACAATAAACATGGTGTGGAAGCTCTAG HS_haplotype2 TATTGAAATTTATGTCTCTTCTTAAACTCCCTGACAATAAACATGGTGTGGAAGCTCTAG *********************************************************** HS_haplotype1 GGAGGCAGGAGTTGGAAAGATTGTCCACCCACTGCACTTGTAAGTTAGAGGGACAAGAAG HS_assemblymutate GGAGGCAGGAGTTGGCAAGATTGTCCACCCACTGCACTTGTAAGTTAGAGGGACAACAAG HS_haplotype2 GGAGGCAGGAGTTGGCAAGATTGTCCACCCACTGCACTTGTAAGTTAGAGGGACAACAAG *************** **************************************** *** HS_haplotype1 GTAATCTTGATCTTCTGTTTCAAACAGGGAACTAGAACAAAAACTAAATGTCATTAGAGA HS_assemblymutate GTAATCTTGATCTTCTGTCTCAAACAGGGAACTAGAACAAAAACTAAATGTCATTAGAGA HS_haplotype2 GTAATCTTGATCTTCTGTCTCAAACAGGGAACTAGAACAAAAACTAAATGTCATTAGAGA ****************** ***************************************** HS_haplotype1 AATAACAAGATGCTGGAATTTAGTAACCCAGCCGACTGCACTACAAAACTAGATTTAATC HS_assemblymutate AATAACAAGATGCTGGATGTTAGTAACCCAGCCCACTGCACTACAAAACTAGATTTAATC HS_haplotype2 AATAACAAGATGCTGGATGTTAGTAACCCAGCCCACTGCACTACAAAACTAGATTTAATC ***************** ************** ************************** HS_haplotype1 AAGATTAGGGCATTGAGCCAGGATTCACTGGGCATGTTTTTTCCTCCCTTAAGCTGAGGT HS_assemblymutate AAGATTAGTGCATTGAGCCAGGATTCACTGGGCATGTTTTTTCCTCCCTTAAGCTGAGGT HS_haplotype2 AAGATTAGTGCATTGAGCCAGGATTCACTGGGCATGTTTTTTCCTCCCTTAAGCTGAGGT ******** *************************************************** HS_haplotype1 CTTTCTCAGAAATTGTAGATGTTAATAATTCCACCTATTGAAATCCCAGCGGCCGAGGGA HS_assemblymutate CTTTCTCAGAAATTGTAGATGTTAATAATTCCACCTATTGAAATCCCAGCGGCAGAGGGA HS_haplotype2 CCTTCTCAGAAATTGTAGATGTTTATAATTCCACCTATTGAAATCCCAGCGGCAGAGGGA * ********************* ***************************** ****** HS_haplotype1 GACCACCTAGAATCCTGACCAAGTTTATAGAAAGGCTCATGCAGGAAAAGTATTCGCAGG HS_assemblymutate GACCACCTAGAATCCTGACCTAGCTTATAGAAAGGCTCATGCCGGAAAAGTATTCGCAGG HS_haplotype2 GACCACCTAGAATCCTGACCTAGCTTATAGAAAGGCTCATGCCGGAAAAGTATTCGCAGG ******************** ** ****************** ***************** HS_haplotype1 GACGTTGGAGTTCAGAGGATGTGTTAGCTGAAAACATTTATAGTGCTAATGCCCCTTAAC HS_assemblymutate GACGTTGGAGTTCAGAGGATGTGTTTGCTGAAAACATTTATAGTGCTAATGCCCCTTAAC HS_haplotype2 GACGTTGGAGTTCAGAGGATGTGTTTGCTGAAAACATTTATAGTGCTAATGCCCCTTAAC ************************* ********************************** HS_haplotype1 CGGCCTTTCTGTG----AAAAAATGCCACACAAGTTTTGGAGTGGAGAAGAGGTGTGCTG HS_assemblymutate CGGCCTTTCTGTGAACTAAAACATGCCACACAAGCTTTGGAGTGGAGAAGAGGTGTGCTG HS_haplotype2 CGGCCTTTCTGTG----AAAACATGCCACACAAGCTTTGGAGTGGAGAAGAGGTGTGCTG ************* **** ************ ************************* HS_haplotype1 GGTTTCGCTCTGGAATGGGGTTCATTTTTCCATGTGGCTTTTGTAGATGGGTATGTTAAC HS_assemblymutate GGTTTCGCTCTGGAATGGGGTTCATTTTTCCATGTGGCTTTTGTAGATGGGTATGTTAAC HS_haplotype2 GGTTTCGCTCTGGAATGGGGTTCATTTTTCCATGTGGCTTTTGTAGATGGGGATGTTAAC *************************************************** ******** HS_haplotype1 TTATTATGTTATGGTCAGGTGCTGATGCAGCCTGGAGCTCCTGTTTTCAGAACACTATCC HS_assemblymutate TTATTATGTTATGGTCAGGTGCTGATGCAGCCTGGAGCTCCTGTTTTCAGAACACTATCC HS_haplotype2 TTATTATGTTATGGTCAGGTGCTGATGCAGCCTGGAGCTGCTGTTTTCAGAACACTATCC *************************************** ******************** HS_haplotype1 TTTTTGTTTATTTGATAGGGATAAGCAGACGGGGGTAATTGCTCCTGCCTCAGGCATTCC HS_assemblymutate TTTTTGTTTATTTGATAGGGATAAGCAGACGGGGGTAATTGCTCCTGCCTCAGGCATTCC HS_haplotype2 TTTTTGTTTATTTGATAGGGATAAGCAGACGGGGGTAATTGCTCCTGCCTCAGGCATTCC ************************************************************ HS_haplotype1 AGCAGTCTTTGTTTAACTGTTCCAAAAGGATTTGTCTCAAAACCTTGAAATATTTTTTAA HS_assemblymutate AGCAGTCTCTGTTTAACTGTTCCAAAAGGATTTGTCTCAAAACCTTGAAATATTTTTTAA HS_haplotype2 AGCAGTCTCTGTTTAACTGTTCCAAAAGGATTTGTCTCAAAACCTTGAAATATTTTTTAA ******** *************************************************** HS_haplotype1 GAAAGATCGGCTTGCTTTGCATGGGAATCTTGCCTGTATCTTAGTCCCACACTTATTAGA HS_assemblymutate GAAAGATCGGCTTGCTTTGCATGGGAATATTGTCTGTATCTTAGTCCCACACTTATTAGA HS_haplotype2 GAAAGATCGGCTTGCTTTGCATGGGAATATTGTCTGTATCTTAGTCCCACACTTATTAGA **************************** *** *************************** HS_haplotype1 TCCATAAATGATGTCCTCACAGACTTACTTGGGAGGGTAGCTGGGAGGCACGGGTTCCAT HS_assemblymutate TCCATAAATGATGTCCTCAGAGACTTACTTGGGAGGGTAGCTGGGAGGCACGGGTTCCAT HS_haplotype2 TCCATAAATGATGTCCTCAGAGACTTACTTGGGAGGGTAGCTGGGAGGCACGGGTTCCAT ******************* **************************************** HS_haplotype1 GTTTAAAATAAGTCTTACCAGTGGAAATGGTAGCATAAACCGTGTGGGAGGCTTCAGCTA HS_assemblymutate GTTTAAAATAAGTCTTACCAGTGGAAATGGTAGCATAAACCGTGTGGGAGGCTTCAGCTA HS_haplotype2 GTTTAAAATAAGTCTTACCAGTGGAAATGGTAGCATAAACCGTGTCGGAGGCTTCAGCTA ********************************************* ************** HS_haplotype1 TAAAATGTTTACAGGGAAAATTAGGCAGAACTGACTGTCGCCCAGGAGTCTGCCTACAGG HS_assemblymutate TAAAATGTTTACAGGGAAAATTAGGCAGAACTGACTGTCGCCCAGGAGTCTGCCTACAGG HS_haplotype2 TAGAATGTTTACAGGGAAAATTAGGCAGAACTGACTGTCGCCCAGGAGTCTGCCTACAGG ** ********************************************************* HS_haplotype1 GCATGGGTTGGTGGTTCCAGGCCCAGCCTCAGTGTCACAATTTTTATCAAGCCCTGGCCT HS_assemblymutate GCATGGGTTGGTGGTTCCAGGCCCAGCCTCAGTGTCACAATTTTTATCAAGCCCTGGCCT HS_haplotype2 GCATGGGTTGGTGGTTCCAGGCCCAGCCTCAGTGTCACAATTTTTATCAAGCCCTGGCCT ************************************************************ HS_haplotype1 TGGGATTGGACAGAATTTAAATATATAGCTCAAAGTCAAGTGTCTGGATTATTTGGAAGG HS_assemblymutate TGGGATTGGACAGAATTTAAATATATAGCTCAAGGTCAAGTGTCTGGATTATATGGAAGG HS_haplotype2 TGGGATTGGACAGAATTTAAATATATAGCTCAAGGTCAAGTGTCTGGATTATATGGAAGG ********************************* ****************** ******* HS_haplotype1 TAGCTCTAAAAACTTCTCCAACACACCGCCCCACCAATGTTCTCTCTTATAACTGGCTTA HS_assemblymutate TAGCTCTAAAAACTTCTCCAACACACCGCCCCACCAATGTTCTCTCTTATAACTGGCTTA HS_haplotype2 TAGCTCTAAAAACTTCTCCAACACACCGCCCCACCAATGTTCTCTCTTATAACTGGCTTA ************************************************************ HS_haplotype1 ATAATTTCAGATTTACCTGAGACATGTTTATCTCGGAGCCACCCCTTTTGTTAGACATTT HS_assemblymutate ATAATTTCAGATTTACCTGAGACATGTTTATCTCGGAGCCACCCCTTTTGTTAGACATTT HS_haplotype2 ATAATTTCAGATTTACTTGAGACATGTTTATCTCGGAGCCACCCCTTTTGTTAGACATTT **************** ******************************************* HS_haplotype1 CTGTGTACCAACATTTTTTCAGGGGGCATTTCTTATAATTTATATATGGTTCTTAAGGGG HS_assemblymutate CTGTGTACCAACATTTTTTCAGGGGGCATTTCTTATAATTTATATATGGTTCTTAAGGGG HS_haplotype2 CTGTGTACCAACATTTTTTCAGGGGGCATTTCTTATAATTTATATATGGTTCTGGAGGGG ***************************************************** ***** HS_haplotype1 CTCTCTACCTGGCGGGACGGAGGCTTCTGGAATATTTTACATGATCATACAAAGCTCAGA HS_assemblymutate CTCTCTACCTGGCGGGACGGAGGCTTCTGGAATATTTTACATAATCATACAAAGCTCAGA HS_haplotype2 CTCTCTACCTGGCGGGACGGAGGCTTCTGGAATATTTTACATAATCATACAAAGCTCAGA ****************************************** ***************** HS_haplotype1 GGATGAGATGTAGAATGATGGCCTGGGGATGGAGGCTGCAGAACTAAGTTATTTCCTGTA HS_assemblymutate GGATGAGATGTAGAATGCTGGCCTGGGGATGGAGGCTGCAGAACTAAGTTATTTCCTGTA HS_haplotype2 GGATGAGATGTAGAATGCTGGCCTGGGGATGGAGGCTGCAGAACTAAGTTATTTCCTGTA ***************** ****************************************** HS_haplotype1 TTATCTAAGGCTCTTGTAAGTATTAAGTGGCCCTTCCTGCTGCTAATTTTGTTCATGAGC HS_assemblymutate TTATCTAAGGCTATTGTAAGTATTAAGTGGCCCTTCCTGCTGCTAATTTTGTTCATGAGC HS_haplotype2 TTATCTAAGGCTATTGTAAGTATTAAGTGGCCCTTCCTGCTGCTAATTTTGTTCATGAGC ************ *********************************************** HS_haplotype1 ACTCTCAGCAGACGCATTTTGCCAGGCTGGCCCTCCCAAGATGCTGGAGAGAATAAAAGC HS_assemblymutate ACTCTCAGCAGACGCATTTTGCCAGGCTGGCCCTCCCAAGATGCTGGAGAGAATAAAAGC HS_haplotype2 ACTCTCAGCAGACGCATTTTGCCAGGCTGACCCTCCCAAGGTGCTGGAGAGAATAAAAGC ***************************** ********** ******************* HS_haplotype1 ATGGAAGGCAGGGAAGGCGGGGTGGCTTACCATGGTAATCCCTTTTATGCAGCATCCCAG HS_assemblymutate ATGGAAGGCAGGGAAGGCGGGGTGGCTTACCATGGTAATCCCTTTTATGCAGCATCCCAG HS_haplotype2 ATGGAAGGCAGGGAAGGCGGGGTGGCTTACCATGGTAATCCCTTTTATGCAGCATCCCAG ************************************************************ HS_haplotype1 AGCTACTAAAAATGTCAGACAAAAATACCCGCTTGGAAAATCCCCACCTAGGGCCTCCCT HS_assemblymutate AGCTACTAAAAATGTCAGACAAAAATACCCGCTTGGAAAATCCCCACCTAGGGCCTCCCT HS_haplotype2 AGCTACTAAAAATGTCAGACAAAAATACCCGCTTGGAAAATCCCCACCTAGGGCCTCCCC *********************************************************** HS_haplotype1 ACCCAGGCTATGTCTCTGAATGCGTCGGGAGCTGGGGGCTCAGCTGACTGTAGCTATGGT HS_assemblymutate ACCCAGGCTATGTCTCTGAATGCGTCGGGAGCTGGGGGCTCAGCTGTCTGTAGCTATGGT HS_haplotype2 ACCCAGGCTATGTCTCTGAATGCGTCGGGAGCTGGGGGCTCAGCTGTCTGTAGCTATGGT ********************************************** ************* HS_haplotype1 GAGCCAGAACTATTTATTTTTTAGAAGAAAGAAGGGAAACAGGACTACAACTTTACTGGG HS_assemblymutate GAGCCAGAAGTATTTATTTTTTAGAAGAATGAAGGGAAACAGGACTACAACTTTACTGGG HS_haplotype2 GAGCCAGAAGTATTTATTTTTTAGAAGAATGAAGGGAAACAGGACTACAACTTTACTGGG ********* ******************* ****************************** HS_haplotype1 AGAACTAAATGCACAAGTATAGAGAAACGACTTCCACTCATCCAGCGCTTTGCACCGTGG HS_assemblymutate AGAACTAAATGCACAAGTATAGAGAAACGACTTCCACTCATCCAGCGCTGTGCACGGTGG HS_haplotype2 AGAACTAAATGCACAAGTATAGAGAAACGACTTCCACTCATCCAGCGCTGTGCACGGTGG ************************************************* ***** **** HS_haplotype1 GAAATTTTATAAGGACTGACAGAATAGATATGGTTAGTTCTCAGTCATAAGTCATGTGTA HS_assemblymutate GAAATTTTATAAGGACTGACAGAATATATATGGTTAGGTCTCAGTCATAAGTCATGTGTA HS_haplotype2 GAAATTTTATAAGGACTGACAGAATATATATGGTTAGGTCTCAGTCATAAGTCATGTGTA ************************** ********** ********************** HS_haplotype1 TAATGCAAGGCAGCCCCCTAGGCATATGAGGTTTTGTGCCCAAGGTTTCAAAGAAGAAGG HS_assemblymutate TAATGCAAGGCAGCCCCCTAGGCATATGAGGTTTTGTGCCCAAGGTTTCAAAGAAGAAGG HS_haplotype2 TAATGCAAGGCAGCCCCCTAGGCATATGAGGTTTTGTGCCCAAGGTTTCAAAGAAGAAGG ************************************************************ HS_haplotype1 TACAAATGATTTCTCGGCATATTTGACTGTAATCACCAGCTGTACAAAAAATCTCTCACG HS_assemblymutate TACAAATGATTTCTCGGCATATTTGACTGTAATCACCAGCTGTACAAAAAATCTCTCACG HS_haplotype2 TACAAATGATTTCTCGGCATATTTGACTGTAATCACCAGCTGTACAAAAAATCTCTCACG ************************************************************ HS_haplotype1 CCTGGTTTGGTCCAGCACTACGCGCCTGTAGTCAGAGATGGTTCAGGCTGTCCCAGAGTA HS_assemblymutate CCTGGTTTGGTCCAGCACTACGCGCCTGTAGTCAGAGATGGTTCAGGCTGTCCCAGAGTA HS_haplotype2 CCTGGTTTGGTCCAGCACTACGCGCCTGTAGTCAGAGATGGTTCAGGCTGTCCCAAAGTA ******************************************************* **** HS_haplotype1 ATGCCTTTGGTCCAGTGATCGCCACTGAGTCCGGCACAGGAGTGTGCCTGAGAACAGAGG HS_assemblymutate ATGCCTTTGGTCCAGTGATCGCCACTGAGTCCGGCACAGGAGTGTGCCTGAGAACAGAGG HS_haplotype2 ATGCCTTTGGTCCAGTGATCTCCACTGAGTCCTGCACAGGAGTGTGCCTGAGAACAGAGG ******************** *********** *************************** HS_haplotype1 TGTATTTTCTATTAAAAACAATCACAGAGCATCAGAAATTATAGCTTCCACCAAGGCCAA HS_assemblymutate TGTATTTTCTATTAAAAACAATCACAGAGCATCAGAAATTATAGCTTCCACCAAGGCCAA HS_haplotype2 TGTATCTCCTATTAAAAACAATCACAGAGCATCAGAAATTATAGCTTCCACCAAGGCCAA ***** * **************************************************** HS_haplotype1 TGTAGCCTCGTGCGGGATAAAACTGCCAAGCGCAGCTAGGATATTACTTAAAATAAAACA HS_assemblymutate TGTAGCCTCGTGCGGGATAAAACTGCCAAGCGCAGCTAGGATATTACTTAAAATAAAACA HS_haplotype2 TGTAGCCTCGTGCGGGATAAAACTGCCAAGCGCAGCTAGGATATTACTTAAAATAAAACA ************************************************************ HS_haplotype1 TCATCTCAGGAGAGGCCAAGACTTCCTGAAAGAAAGCATTACGGGCCAATAATAAAACAG HS_assemblymutate TCATCGCAGGAGAGGCCAAGACTTCCTGAAAGAAAGCATTACGGGCCAATAATAAAACAG HS_haplotype2 TCATCGCAGGAGAGGCCAAGACTTCCTGAAAGAAAGCATTGCGGGCCAATAATAAAACAG ***** ********************************** ******************* HS_haplotype1 TCCAATCACTTTTCTTACTCTTACTGTGTTAGAGAAAGTTTTCTTTTGTCAAAGGCAACA HS_assemblymutate TCCAATCACTTTTCTTACTCTTACTGTGTTAGAGAAAGTTTTCTTTTGTCAAAGCCAACA HS_haplotype2 TCCAATCACTTTTCTTACTCTTACTGTGTTAGAGAAAGTTTTCTTTTGTCAAAGCCAACA ****************************************************** ***** HS_haplotype1 TTTTTAGAGCTGCCTAATCGCTACAAGGTGAGATCTTCAAGTCCTGACATTCATCAAAAA HS_assemblymutate TTTTTAGAGCTGCCTAATCGCTACAAGGTGAGATCTTCAAGTCCTGACATTCATCAAAAA HS_haplotype2 TTTTTAGACGTGCCTAATCGCTACAAGGTGAGATCTTCAAGTCCTGACATTCATCAAAAA ******** ************************************************** HS_haplotype1 TACCTTCTGCTCACTGTCCTGAGGTACACACCCAGGCAA-ACGAGGGTTTCTCAGTTTAC HS_assemblymutate TACCTTCTGCTCACTGTCCTGAGGTACACACCCAGGCAACACGAGGGTTTCTCAGTTTAC HS_haplotype2 TTCCTTCTGCTCACTGGCCTGAGGTACACACCCAGGCAA-ACGAGGGTTTCTCAGTTTAC * ************** ********************** ******************** HS_haplotype1 ATTTCTCCACTCTGGCTATGTTCTGACACACTTATTTTATCTGTGGGAAGGTATCCCGTG HS_assemblymutate ATTTCTCCACTCTGGCTATGTTCTGACTCACTTATTTTATCTGTGGGAAGGTATCCCGTG HS_haplotype2 ATTTCTCCACTCTGGCTATGTTCTGACTCACTTATTTTATCTGTGGGAAGGTATCCCGTG *************************** ******************************** HS_haplotype1 GCCTCCTGGCCGGATGTAATCTCGAGTTTGTTTCCATATCACCATGATAGGGCATTGTGA HS_assemblymutate GCCTCCTGGCCCGATGTAATCTCGAGTTTGTTTCCATATCACCATGATAGGGCATTGTGA HS_haplotype2 GCCTCCTGGCCCGATGTAATCTCGAGTTTGTTTCCATATCACCATGATAGGGCATTGTGA *********** ************************************************ HS_haplotype1 CTTCCCAACTCTGCCACCGATTCTAAAACAATTTCTGGGTTGTTAAATGTGACAGCTAGA HS_assemblymutate CTTCCCAACTCTGCCACCGATTCTAAAACAATTTCTGGGTTGTTAAATGTGACAGCTAGA HS_haplotype2 CTTCCCAACTCTGCCACCGATTCTAAAACAATTTCTGGGTTGTTAAATGTGACAGCTAGA ************************************************************ HS_haplotype1 GGGTCTTTCCATTACTTTTGTATCAATGATGATGTCTTCTGCTTACAGAGTGTTTCATAA HS_assemblymutate GGGTCTTTCCATTAGTTTTGTATCAATGATGATGTCTTCTGCTTACAGAGTGTTTCATAA HS_haplotype2 GGGTCTTTCCATTAGTTTTGTATCAATGATGATGTCTTCTGCTTACAGAGTGTTTCATAA ************** ********************************************* HS_haplotype1 CTTTCACTTGATAGGTGCCTGAGCTCTGGTCCCTGGAGTTCTCCAAATCTTGAGGTTATT HS_assemblymutate CTTTCACTTGATAGGTGCCTGACCTCTGGTCCCTGGAGTTCTCCAAATCTTGAGGTTATT HS_haplotype2 CTTTCACTTGATATGTGCCTGACCTCTGGTCCCTGGAGTTCTCCAAATCTTGAGGTTATT ************* ******** ************************************* HS_haplotype1 TGTACTGACCAAATAAACCATCTAGTGGTGGAATCAAATTGGAAAAATTAAATATGTATT HS_assemblymutate TGTACTGACCAAATAAACCATCTAGTCGTGGAATCAAATTGGAAAAATTAAATATGTATT HS_haplotype2 TGTACTGACCAAATAAACCATCTAGTCGTGGAATCAAATTGGAAAAATTAAATATGTATT ************************** ********************************* HS_haplotype1 GATGGAGGAATAACTTTGTACCCAGCCGTGGGAACCGCTCCCTTCAAAAAGATATAAAAT HS_assemblymutate GATGGAGGAATACCTTTGTACCCAGCCGTGGGAACCGCTCCCTTCAAAAAGATATAAAAT HS_haplotype2 GATGGAGGAATACCTTTGTACCCAGCCGTGGGAACCGCTCCCTTCAAAAAGATATAAAAT ************ *********************************************** HS_haplotype1 AATGAGAGGACCCTCGCCTCATTTTTGAATATGGTTCTCTGAGGAACAAAATGTATGGTG HS_assemblymutate AATGAGAGGACCCTCGCCTCATTTTTGAATATGGTTCTCTGAGGAACAAAATGTATGGTG HS_haplotype2 AATGAGAGGACCCTCGCCTCATTTTTGAATATGGTTCTCTGAGGAACAAAATGTAAGGTG ******************************************************* **** HS_haplotype1 GGGAGTAAGGAATATATGCTTTTTATTTTTACTACAGGTGGCGGGGAATGGGGGCTCGGG HS_assemblymutate GGGAGTAAGGAATATATGCTTTTTATTTTTACTACAGGTGGCGGGGAATGGGGGCTCGGG HS_haplotype2 GGGAGTAAGGAATATATGCTTTTTATTTTTACTACAGGTGGCGGGGAATGGGGGCTCGGG ************************************************************ HS_haplotype1 TTATGTGTAAAAATATATAAAATTATGGGTTTGAGGCAGGACGTCTGCAGTGGCCCATTG HS_assemblymutate TTATGTGTAAAAATATATAAAATTATGGGTTTGAGGCAGGACGTCTGCAGTGGCCCATTG HS_haplotype2 TTATGTGTAAAAATATATAAAATTATGGGTTTGAGGCAGGACGTCTGCAGTGGCCCATTG ************************************************************ HS_haplotype1 CAAGAATAGTGAGAATCATTTGGTTTCCTTCAGGCTGACCAGTCGTTCATCTGAACCACC HS_assemblymutate CAAGAATAGTGAGAATCATTTGGTTTCCTTCAGGCTGACCAGTCGTTCATCTGAACCACC HS_haplotype2 CAAGAATAGTGAGAATCATTTGGTTTCCTTCAGGCTGACCAGTCGTTCATCTGAACCACC ************************************************************ HS_haplotype1 CCAGGTATGAGATTGTCTCCATAAGCGGATCAGCCTCACATGATATATGTGAACATGGGA HS_assemblymutate CCAGGTATGAGATTGTCTCCATAAGCGGATCAGCCTCACATAATATATGTGAACATGGGA HS_haplotype2 CCAGGTATGAGATTGTCTCCATAAGCGGATCAGCCTCACATAATATATGTGAACATGGGA ***************************************** ****************** HS_haplotype1 AGGGGAACATGGAGACTCAGCATTTTTACTGTGTCCTCCCACCGTGTGGAGCGGCCACAG HS_assemblymutate AGGGGAACATGGAGACTCAGCATTTTTACTGTGTCCTCCCACCGTGTGGAGCGGCCACAG HS_haplotype2 AGGGGAACATGGAGACTCAGCATTTTTACTGTGTCCTCCCACCGTGTGGAGCGGCCACAG ************************************************************ HS_haplotype1 CTGAAGGAAAGAGAAGCATGTAAGTCCTGAGGTTGCAGGCCACAGTAGTTCCGCCGCGGT HS_assemblymutate CTGAAGGAAAGAGAAGCATGTAAGTCCTGAGGTTGCAGGCGACAGTAGTTCCGCCGCGGT HS_haplotype2 CTGAAGCAAAGAGAAGCATGTAAGTCCTGAGGTTGCAGGCGACAGTAGTTCCGCCGCGGT ****** ********************************* ******************* HS_haplotype1 GTGGAGGAGTGAGGAGTTATGGATAAGTTCCCCAAGGGGAGACAAGCCACACAGTTTACA HS_assemblymutate GTGGAGGAGTGAGGAGTTATGGATAAGTTCCCCTAGGGGAGACAAGCCACACAGTTTACA HS_haplotype2 GTGGAGGAGTGAGGAGTTATGGATAAGTTCCCCTAGGGGAGACAAGCCACACAGTTTACA ********************************* ************************** HS_haplotype1 GCATTGCAGTGGTAGGGTGTATGTAATTGTGTCTCGCCTGGGTCTCCCACAGCCTGGTAT HS_assemblymutate GCATTGCAGTGGTAGGGTGTATGTAATTGTGTCTCGCCTGGGTCTCCCACAGCCTGGTAT HS_haplotype2 GCATTGCAGTGGTAGGGTGTATGTAATTGTGTCTCGCCTGGGTCTCCCACAGCCTGGTAT ************************************************************ HS_haplotype1 ATAAAACATAATTCAGCCTGGGCATGGAGCGCGACTGTTCAACCCAGATGTTAGAAGAAT HS_assemblymutate ATAAAACATAATTCAGCCTGGGCATGGAGCGCGACTGTTCAACCCAGATGTTAGAAGAAT HS_haplotype2 ATAAAACATAATTCAGCCTGGGCATGGAACGCGACTGTTCAACCCAGATGTTAGAAGAAT **************************** ******************************* HS_haplotype1 CCTCCAGTTAAAATGCAACCATTGTGGCTCATTCCTTCAGAAATATTATTAATGTAAAAA HS_assemblymutate CCTCCAGTTAAAATGCAACCATTGTGGCTCATTCCTTCAGAAATATTATTAATGTTAAAA HS_haplotype2 CCTCCAGTTAAAATGCAACCAGTGTGGCTCATTCCTTCAGAAATATTATTAATGTTAAAA ********************* ********************************* **** HS_haplotype1 CTCGTCCTCATATAAATAGAAATTCCCCTCCACAACAAACCATGCTTTGGAACATTCCCC HS_assemblymutate CTCGTCCTCATATAAACAGTCATTCCCCTCCACAACAAACCATGCTTTGGAACTTTCCCC HS_haplotype2 CTCGTCCTCATATAAACAGTCATTCCCCTCCACAACAAACCATGCTTTGGAACTTTCCCC **************** ** ******************************** ****** HS_haplotype1 TCTACCCTTCCTAAGGGACCCAGTAAGGTAACTACCCGGGCCTCTGCAGGGGTGCCTGCC HS_assemblymutate TGTACCCTGCCTAATGGACCCAGTAAGGTAACTACCCGGGCCTCTGCAGGGGTGCCTGCC HS_haplotype2 TGTACCCTGCCTAATGGACCCAGTAAGGTAACTACCCGGGCCTCTGCAGGGGTGCCTGCC * ****** ***** ********************************************* HS_haplotype1 AGTCACTGCCTCAAAGCATGACAGGTGAGCCCACTGCACTTTAAAATAAATCCCCACCTG HS_assemblymutate AGTCACTGCCTCAAAGCATGACAGGTGAGCCCACTGCACTTTAAAATAAATCCCCACCTG HS_haplotype2 AGTCACTGCCTCAAAGCATGACAGGTGAGCCCACTGCACTTTAAAATAAATCCCCACCTG ************************************************************ HS_haplotype1 TTTGTAATATATTCAAGAGTGCCACACAGTTTAGTTTAATGGGAAGAGCCTACATGGCCA HS_assemblymutate TTTGTAATATATTCAAGAGTGCCACACAGTTTAGTTTAATGGGAAGAGCCTACATGGCCA HS_haplotype2 TTTGTAATATATTCAAGAGTGCCACACAGTTTAGTTTAATGGGAAGAGCCTACATGGCCA ************************************************************ HS_haplotype1 GACAGGTGCGTTTGATTACAGTAGGCCCATTTGTAGAAAAATATCCCAGCTTGAGGTTTT HS_assemblymutate GACAGGTGCGTTTGATTACAGTAGGCCCATTTGTAGAAAAATATCCCAGCTTGAGGTTTT HS_haplotype2 GACAGGTGGGTTTGATTACAGTAGGCCCATTTGTAGAAAAATATCCCAGCTTGAGGTTTT ******** *************************************************** HS_haplotype1 GGGACAGTACCTGTTGTCTCGAGCGGCACAAATGGAGTTTTCCTTTAAATTTGGCAAAAG HS_assemblymutate GGGACAGTACCTGTTGTCTCGAGCGGCACAAATGGAGTTTTCCTTTAAATTTGGCAAAAG HS_haplotype2 GGGACAGTACCTGTTGTCTCCAGCGGCACAAATGGAGTTTTCCTTTAAATTTGGCAAAAG ******************** *************************************** HS_haplotype1 AGGCCCCGGAGGGCCCGCGCAGGAATCACCTTTGCTTCTT----TCTATAAAAAATAAGC HS_assemblymutate AGGCCCCGGAGGGCCCTCGCAGGAATCACCTTTGCTTCTTGAAATCTATAAAAAATAAGC HS_haplotype2 AGGCCCCGGAGGGCCCTCGCAGGAATCACCTTTGCTTCTT----TCTATAAAAAATAAGC **************** *********************** **************** HS_haplotype1 TTCTCAGAACAATTAATTTATATGCGAGGATGGTGAGAGACAGTGTCCTGTGGAAGACGT HS_assemblymutate TTCTCAGAACAATTAATTTTTATGCGAGGATGGTGAGAGACAGTGTGCTGTGAAAGACGT HS_haplotype2 TTCTCAGAACAATTAATTTTTATGCGAGGATGGTGAGAGACAGTGTGCTGTGAAAGACGT ******************* ************************** ***** ******* HS_haplotype1 CTCAGGGAAAGATTTCAGTAATCCTGAAGCAAGGTGTTGCAGGCGTGGTTTTTGGAAGGT HS_assemblymutate CTCAGGGAAAGATTTCAGTAATCCTGAAGCAAGGTGTTGCAGGCGTGGTTTTTGGAAGGT HS_haplotype2 CTCAGGGAAAGATTTCAGTAATCCTGAAGCAAGGTGTTGCAGGCGTGGTTTTTGGAAGGT ************************************************************ HS_haplotype1 GAATCATAGCAAGAGAATTCTGGAGACACACAGAACTTGAGGCTTACCTTTTTTGTGAAC HS_assemblymutate GAATCATAGCAAGATAATTCTCGAGCCACACAGAACTTGAGGCTTACCTTTTTCGTGAAC HS_haplotype2 GAATCATAGCAAGATAATTCTCGAGCCACACAGAACTTGAGGCTTACCTTTTTCGTGAAC ************** ****** *** *************************** ****** HS_haplotype1 AGATCTGCTGGGAGAGGCCACAACTAGATAGCCAAACATTCTCAAAAATGGTGTGTGCAC HS_assemblymutate AGATCTGCTGGGAGAGGCCACAACTAGATAGCCAAACATTCTCAAAAATGGTGTGTGCAC HS_haplotype2 AGATCTGCTGGGAGAGGCCACAACTAGATAGCCAAACATCCTCAAAAATGGTGTGTGCAC *************************************** ******************** HS_haplotype1 TAGCCCCTAGTTAGGTGGTTCAGTCAGTTTATCACCGTGATCTCTAATTTGGGAGGAGAC HS_assemblymutate TAGCCCCTAGTTAGGTGGTTCAGTCAGTTTATCACCGTGATCTCTAATTTGGGAGGAGAC HS_haplotype2 TAGCCCCTAGTCAGGTGGTTCAGTCAGTTTATCACCATGATCTCTAATTTGGGAGGAGAC *********** ************************ *********************** HS_haplotype1 AAATAGTCCCTTACTGTTTTTGAGACTTCTGGGGATAAGGATGTCTACAGTGTTACCGGT HS_assemblymutate AAATAGTCCCTTACTGTTTTTGAGACTTCTGGGGATAAGGATGTCTACAGTGTTACCGGT HS_haplotype2 AAATAATCCCTTACTGTTTTTGAGACTTCTGGGGATAAGGATGTCTACAGTGTTACCGGT ***** ****************************************************** HS_haplotype1 TTTTGAGACTCTTGTTCTGAATTGTCTATAGGCTGCTCTGCTGGGTACTGGTAAAAGATA HS_assemblymutate TTTTGAGACTCTTGTTCTGAATTGTCTATAGGCTGCTCTGCTGGGTACTGGTAAAAGATA HS_haplotype2 TTTTGAGATTCTTGTTCTGAATTGTCTATAGGCTGCTCTGCTGGGTACTGGTAAAAGATA ******** *************************************************** HS_haplotype1 AATGCTTCCATTTATCTATAGTTGTCTGAAGTTAAACTTCGCTTTTTACCTGCAATTCAA HS_assemblymutate AATGCTTCCATTTATCTATAGTTGTCTGAAGTTAAACTTCGCTTTTTAGCTGCAATTCAA HS_haplotype2 AATGCTTCCATTTATCTATAGTTGTCTGAAGTTAAACTTCGCTTTTTAGCTGCAATTCAA ************************************************ *********** HS_haplotype1 GGCAGCTATCTCAACAAATTTCAGTCATTTAGGACTTTGCCATTATGAACATTGTTATAG HS_assemblymutate GGCAGCTATCTCAACAAATTTCAGTCATTTAGGACTTTGCCATTATGAACATTGTTATAG HS_haplotype2 GGCAGCTATCTCAACAAATTTCAGTCATTTAGGACTTTGCCATTATGAACATTTTTATAG ***************************************************** ****** HS_haplotype1 AGGTCTTTTTGGGAGGAAATTGAGCCAGGAGAAGGAAGCTGAAGTGAGCCAAATGAATAT HS_assemblymutate AGGTCTTTTTGGGAGGAAATTGAGCCAGGAGAAGGAAGCTGAAGTGAGCCAAATGAATAT HS_haplotype2 AGGTCTTTTTGGGAGGAAATTGAGCCAGGAGAAGGAAGCTGAAGTGCGCCAAATGAATAT ********************************************** ************* HS_haplotype1 TTATTGGGGTGGGATTTGATTCTTTGCTCTTTTTCACACAAAAGTACTAAAAGAACCATG HS_assemblymutate TTATTGGGGTGGGATTTGATTCTTTGCTCTTTTTCACACAAAAGTACTAAAAGAACCATG HS_haplotype2 TTATTGGGGTGGGAATTGATTCTTTGCTCTTGTTCACACAAAAGTACTAAAAGAACCATG ************** **************** **************************** HS_haplotype1 CTTCAAAGGAGTCTTGTAATATTTCAAAATTTTTCTGGTGCGTTCCTGACATAAGGACAG HS_assemblymutate ATTCAAAGGAGTCTTGTAATATTTCAAAATTTTTCTGGTGCGTTCCTGACATAAGGACAG HS_haplotype2 ATTCAAAGGAGTCTTGTAATATTTCAAAATTTTTCTGGTGCGTTCCTGACATAAGGACAG *********************************************************** HS_haplotype1 CACAACCTTCATTACTAAGAGGTTATAAATAAATCTTTTTAGCCAATATTATATTCAGGA HS_assemblymutate CACAACCTTCATTACTAAGAGGTTATAAATAAATCTTTTTAGCCAATATTATATTCAGGA HS_haplotype2 CACAACCTTCATTACTAAGAGGTTATAAATAAATCTTTTTAGCCAATATTATATTCAGGA ************************************************************ HS_haplotype1 TGGGAAAATGAACTGTATTGTCAGGGGGCAGAAATTACACTCCCTACAATATATTATTTG HS_assemblymutate TGGGAAAATGAACTGTATTGTCAGGGGGCAGAAATTACACTCCCTACAATATATTATTTG HS_haplotype2 TGGGAAAATGAACTGTATTGTCAGGGGGCAGAAAATACACTCCCTACAATATATTATTTG ********************************** ************************* HS_haplotype1 AAGAAATAGCAATTGCAAACTCAAGTCAGTTATGTGTGAAGCAGCACTATCTAACTTAAA HS_assemblymutate AAGAAATAGCAATTGCAAACTCAAGTCAGTTATGTGTGAAGCAGCACTATCTAACTTAAA HS_haplotype2 AAGAAATAGCAATTGCAAACTCAAGTCAGTTATGTGTGAAGCAGCACTATCTAACTTAAA ************************************************************ HS_haplotype1 CTGAAACCATCATTAATTGCAAAGTGGTGGATGGGCCCAGCAAGATAATCCCAGCTCTGA HS_assemblymutate CTGAAACCATCATTAATTGCAAAGTGGTGGCTCGGCCCAGCAAGATAATCCCAGCTCTGA HS_haplotype2 CTGAAACCATCATTAATTGCAAAGTGGTGGCTCGGCCCAGCAAGATAATCCCAGCTCTGA ****************************** * *************************** HS_haplotype1 CCTCTTCCTTCTAGTAAGGTGTCCATTCCAGGGACTCAAAGTAATGACTGGTCTCTCCAA HS_assemblymutate CCTCTTCCTTCTAGTAAGGGGTCCATTCCAGGGACTCAAAGTAATGACTGGTCTCTCCAA HS_haplotype2 CCTCTTCCTTCTAGTAAGGGGTCCATTCCAGGGACTCAAAGTAATGACTGGTCTCTCCAA ******************* **************************************** HS_haplotype1 CAGGAGGAAGCAATTAGCTACATATCTTCACGACTTAATTTGGAAAAGGATTTCTTGAAA HS_assemblymutate CAGGCGGAAGCAATTAGCTACATATCTTCAGGACTTAATTTGGAAAAGGATTTCTTGAAA HS_haplotype2 CAGGCGGAAGCAATTAGCTACATATCTTCAGGACTTAATTTGGAAAAGGATTTCTTGAAA **** ************************* ***************************** HS_haplotype1 TACCTTAAATAGAGAAGATGTCTATGACCAGAGTAGCAGAGTAAAACCCAGATCGGAGGA HS_assemblymutate TACCTTAAATAGAGAAGATGTCTATGACCAGAGTAGCAGAGTAAAACCCAGATCGGAGGA HS_haplotype2 TACCTTAAATAGAGAAGATGTCTATGACCAGAGTAGCAGAGTAAAACCCAGATCGGAGGA ************************************************************ HS_haplotype1 TAGTGACCCCTCGCATTACAGCTATAAAAATTATATATTCCTTTTAGGAGGACAGGCATA HS_assemblymutate TAGTGACCCCTCGCATTACAGCTATAAAAATTATATATTCCTTTTAGGAGGACAGGCATA HS_haplotype2 TAGTGACCCCTCGCATTACAGCTATAAAAATTATATATTCTTTTTAGGAGGACAGGCATA **************************************** ******************* HS_haplotype1 TTCAGAGCAAGCTTGAAGAAGTCAAGAAGACCACATGATAACAGAGAATCTCAGAGTTTT HS_assemblymutate TTCAGAGCAAGCTTGAAGAAGTCAAGAAGACCACATGATAACAGAGAATCTCAGAGTTTT HS_haplotype2 TTCAGAGGAAGCTTGAAGAAGTCAAGAAGACCACATGATAACAGAGAATCTCAGAGTTTT ******* **************************************************** HS_haplotype1 TGGGGGGTTTATCCTTCTACTTTTTTAGAACTCATTCAGTAGAGTCCAGGACAAGCAATA HS_assemblymutate TGGGGGGTTTATCCTTCTACTTTTTTAGAACTCATTCAGTAGAGTCCAGGACAAGCAATA HS_haplotype2 TGGGGGGTTTATCCTTCTACTTTTTTAGAACTCATTCAGTAGAGTCCAGGACAAGCAATA ************************************************************ HS_haplotype1 AGGGTGGTGAGACATGAGTATGACTAAATACAAGGCCAGATGGTCCTGATACAAGGAAGC HS_assemblymutate AGGGTGGTGAGACATGAGTATGACTAAATACAAGGCCAGATGGTCCTGATACAAGGAAGC HS_haplotype2 AGGGTGGTGAGACATGAGTATGACTAAATACAAGGCCAGATGGTCCTGATACAAGGAAGC ************************************************************ HS_haplotype1 TTGGGTCTTAAGGAACTCTTCTGCCCGGGCCCGAAAATATTTATCTACTCCTGGTCTCAA HS_assemblymutate TTGGGTCTTAAGTAACTCTTCTGCCCGGGCCCGAAAATATTTATCTACTCCTGGTCTCAA HS_haplotype2 TTGGGTCTTAAGTAACTCTTCTGCCCGGGCCCGAAAATATTTATCTACTCCTGGTCTCAA ************ *********************************************** HS_haplotype1 GTAGCTAAAAAAAAAATTTCCTTTTGAGTATTAACTATTATATA------TTCTTAAAAA HS_assemblymutate GTAGCTAAAAAAAAAATTTCCTTTTGAGTATTAACTATTATATATTTTCGTTCTTAAAAA HS_haplotype2 GTAGCTAAAAAAAAAATTTCCTTTTGAGAATTAACTATTATATA------TTCTTAAAAA **************************** *************** ********** HS_haplotype1 GATTTAACCTGAGGAGGGGTAGGCTAGAGGCCATTCCTGTGTCTTTCCATATCTCTACTC HS_assemblymutate GATTTAACCTGAGGAGGGGTAGGCTAGCGGCCATTCCTGTGTCTTTCCATATCTCTACTC HS_haplotype2 GATTTAACCTGAGGAGGGGTAGGCTAGCGGCCATTCCTGTGTCTTTCCATATCTCTACTC *************************** ******************************** HS_haplotype1 TGTGCCAGCTAATTCACACCCCAGACAAGCTATGGAACACTGCTAGGCTCTGTAGTTATT HS_assemblymutate TGTGCCAGCTAATTCACACCCCAGACAAGCTATGGAACACTGCTAGGCTCTGTAGTTATT HS_haplotype2 TGTGCCAGCTAATTCACACCCCAGACAAGCTATGGAACACTGCTAGGCTCTGTAGTTATT ************************************************************ HS_haplotype1 ACTGGCTCACCCCGTCTTCTGGGAGAAATGATAGACCTGTTTTAGTAGCTGGTCCTCAGT HS_assemblymutate ACTGGCTCACCCCGTCTTCTGGGAGAAATGATAGACCTGTTTTAGTAGCTGGTCCTCAGT HS_haplotype2 ACTGGCTCACCCCGTCTTCTGGGAGAAATGATAGACCTGTTTTAGTAGCTGGTCCTCAGT ************************************************************ HS_haplotype1 CTCTACCGGAGCAGGCATGTTAGAAATAAGCCACTATTGCCCGTGTTGTAGATGCGCCCC HS_assemblymutate CTCTACCGGAGCAGGCATGTTAGAAATAAGCCACTATTGCCCGTGTTGTAGATGCGCCCC HS_haplotype2 CTCTACCGGAGCAGGCATGTTAGAAATAAGCCACTATTGCCCGTGTTGTAGATGCGCCCC ************************************************************ HS_haplotype1 TCATTATAATTATCCCCAGCTAATCTTTACAGGAGACTCTAATATGGCCACCGTGCCAGG HS_assemblymutate TCATTATAATTATCCCCAGCTAATCTTTACAGGAGACTCTAATATGGCCACCGTGCCAGG HS_haplotype2 TCATTATAAAAATACCCAGCTAATCTTTACAGGAGACTCTAATATGGCCACCGTGCCAGG ********* ** ********************************************** HS_haplotype1 AGGGCGTAAATTGTGGGAATAGGTGTGCTGAGACAGCAAGAGACAACTTGTTAAAGTGGT HS_assemblymutate AGGGCGTAAATTGTGGGAATGGGTGTGATGAGACAGCAAGAGACAACTTGTTAAAGTGGT HS_haplotype2 AGGGCGTAAATTGTGGGAATGGGTGTGATGAGACAGCAAGAGACAACTTGTTAAAGTGGT ******************** ****** ******************************** HS_haplotype1 AACTTAAGTCACTTTAATTAATGATACAGCTGAGCTGACTCATTTTTCATGTCCTCAAAG HS_assemblymutate AACTTAAGTCACTTTAATTAATGATACAGCTGAGCTGACTCATTTTTCATGTCCTCAAAC HS_haplotype2 AACTTAAGTCACTTTAATTAATGATACATCTGAGCTGACTCATTTTTCATGTCCTCAAAC **************************** ****************************** HS_haplotype1 TCTAAGTTCCAACCAACTAAATATTTAGTCCTTTTACTGTGTCAGGCGGCTCTTCCGAAT HS_assemblymutate TCTAAGTTCCAACCAACTAAATATTTAGTCCTTTTACTGTGTCAGGCGGCTCTTCCGAAT HS_haplotype2 TCTAAGTTCCAACCAACTAAATATTTAGTCCTTTTACTGTGCGAGGCTGCTCTTCCGAAT ***************************************** **** ************ HS_haplotype1 ATACCAAGTCCTCCCTCTATCTGGCGACTCCAGAATGATTGTATGAATAAATGATATTAA HS_assemblymutate ATACCAAGTCCTCCCTCTATCTGGCGACTCCAGAATGATTGTATGAATAAATGATATTAA HS_haplotype2 ATACCAAGTCCTCCCTCTATCTGGCGACTCCAGGATGATTGTATGAATAAATGATATTAA ********************************* ************************** HS_haplotype1 ATCCCTGCCAAAAGCTTGCAGCCAGTGCTCTGACCGTATTTTAATTTAGTTTTTAATCCC HS_assemblymutate ATCCCTGCCAAAAGCTTGCAGCCAGTGCTCTGACCGTATTTTAATTTAGTTTTTAATCCC HS_haplotype2 ATCCCTGCCAAAAGCTTGCAGCCAGTGCTCTGACCGTATTTTAATTTAGTTTTTAATCCC ************************************************************ HS_haplotype1 TGGGATGCCGGACCAGCACTCTGTGGTAGGAAACATAGGACTATGTTTTACTCTTTTTTT HS_assemblymutate TGGGATGCCGGACCAGCACTCTGTGGTAGGAAACATAGGACTATGTTTTACTCTTTTTTT HS_haplotype2 TGGGAGGCCGGACCAGCACTCTGTGGTAGGAAACATAGGACTATGTTTTACTATTTTTTT ***** ********************************************** ******* HS_haplotype1 TGAGACTGTGTATGCAGGAGGCGGGAGGAGGTTTCATTTGAGAAGGGCCTCAGGTAGCCA HS_assemblymutate TGAGACTGTGTATGCAGGAGGCGGGAGGAGGTTTCATTTGAGAAGGGCCTCAGGTAGCCA HS_haplotype2 TGAGACTGTGTATGCAGGAGGCGGGAGGAGGTTTCATTTGAGAAGGTCCTCAGGTAGCCG ********************************************** ************ HS_haplotype1 CTATTTTTCCTCCCTAAGCTGGAATTCTAAAGGTCTTCGATTTACTGTGAGCCTTCTCCA HS_assemblymutate CTATTTTTCCTCCCTAAGCTGGAATTCTAAAGGTCTTCGATTTACTGTGAGCCTTCTCCA HS_haplotype2 CTATTTTTCCTCCCTAAACTGGAATTCTAAAGGTCTTCGATTTACTGTGAGCCTTCTCCA ***************** ****************************************** HS_haplotype1 TGCCTACAAAAGAGCTCCATAGTCCCCGCGGGAGATTCTTCATTTTTAAATTGAGCCAAC HS_assemblymutate TGCCTACAAAAGAGCTCCATAGTCCCCGCGGGAGATTCTTCATTTTTAAATTGAGCCAAC HS_haplotype2 TGCCTACAAAAGAGCTCCATAGTCCCCGCGGGAGATTCTTCATTTTTAAATTGAGCCAAC ************************************************************ HS_haplotype1 AGTGGTGGCGCGCGCGGGACTTTATTTTGACATAAGTGGGAGGTCTCCCCACTAAATGGA HS_assemblymutate AGTGGTGGCGCGCGCGGGACTTTATTTTGACATAAGTGGGAGGTCTCCCCACTAAATGGA HS_haplotype2 AGTGGTGGCGCGCGCGGGACTTTATTTTGACATAAGTCGGAGGTCTCCCCACTAGATGGA ************************************* **************** ***** HS_haplotype1 ACTATTTTATGCTTGAGGAGAGTAGGCCTCCTCTGGGTATAAAAGAAAATTTATAGCCTG HS_assemblymutate ACTATTTTATACTTGAGGAGAGTAGGCCTCCTCTGGGTATAAAAGAAAATTTATAGCCTG HS_haplotype2 ACTATTTTATACTTGAGGAGAGTAGGCCTCCTCTGGGTATAAAAGAAAATTTATAGCCTG ********** ************************************************* HS_haplotype1 GGAGAGATGATGGTCTTCTCCTGACAGATCACCCTTTCATGATTATACAAACTTATCTAT HS_assemblymutate GGAGAGATGATGGTCTTCTCCTGACAGATCACCCTTTCATGATTATACAAACTTATCTAT HS_haplotype2 GGAGAGATGAAGGTCTTCTCCTGAGAGATCACCCTTTCATGATTATACGAACTTATCTAT ********** ************* *********************** *********** HS_haplotype1 TACCCTGGTACACAAAAAATATACATCTCTTGGCTCTTTCCCAAGTAATGAGTTTTGGCC HS_assemblymutate TACCCTGGTACACAAAAAATATACATCTCTTGGCTCTTTCCCAAGTAATGAGTTTTGGCC HS_haplotype2 TACCCTGGTACACAAAAAATATACATCTCTTGGCTCTTTCCCAAGTAATGAGTTTTGGCC ************************************************************ HS_haplotype1 AAGATAAACTCAGGGGCTGAAAGGTGAAACACGTAAAGTGTACCCTCACTCTGTCCAACA HS_assemblymutate AAGATAAACTCAGGGGCTGAAAGGTGAAACACGTAAAGTGTACCCTCACTCTGTCCAACA HS_haplotype2 AAGATAAACTCAGGGGCTGAAAGGTGAAACACGTAAAGTGTACCCTCACTCTGTCCAACA ************************************************************ HS_haplotype1 TGATAGCTCTCTGTCATAGTTTCTTTTTTAATCTATGGGGCTGAAGAAAACTGTAACACA HS_assemblymutate TGATAGCCCTCTGTCATAGTTTCTTTTTTGATCTATGGGGCTGATGAAAACTGTAACACA HS_haplotype2 TGATAGCCCTCTGTCATAGTTTCTTTTTTGATCTATGGGGCTGATGAAAACTGTAACACA ******* ********************* ************** *************** HS_haplotype1 GTTCTGTAAACTCATAAACATTGCATATTTACTTGGCTATGTAAGCTTCTTAGTAGCTGA HS_assemblymutate GTTCTGTAAACTCATAAACATTGCATATTTACTTGGCTATGTAAGCTTCTTAGTAGCTGA HS_haplotype2 GTTCTGTAAACTCATAAACATTGCATATTTACTTGGCTATGTAAGCTTCTTAGTAGCTTA ********************************************************** * HS_haplotype1 GTGTTTGAAGCAAACACAGACTGTGTAGCCGAGATTTTTCTTCCTGTGTGGCAGCAAAAT HS_assemblymutate GTGTTTGAAGCAAACACAGACTGTGTAGCCGAGATTTTTCTTCCTGTGTGGCAGCAAAAT HS_haplotype2 GTGTTTGAAGCAAACACAGATTGTGTAGCCGAGATTTTTCTTCCTGTATGGCAGCAAAAT ******************** ************************** ************ HS_haplotype1 AAGTGATAGTAGATTGGAACCCGCCTGGACTCTTTTTAAATGGGGGTCGCCCACGCATGC HS_assemblymutate AAGTGATAGTAGATTGGAACCCGCCTGGACTCTTTTTAAATGGGGGTCGCCCACGCATGC HS_haplotype2 AACTGAGAGTAGATTGGAACCCGCCTGGACTCTGTTTAAATGGGGGTCGCCCACGCATGC ** *** ************************** ************************** HS_haplotype1 GCCGCTCGTTAACTACTGTTCAGAGAGATTATTTAAAGTATCTACTATGTAGTTTTGTCT HS_assemblymutate GCCGCTCGTTAACTACTGTTCAGAGAGATTATTTAAAGTATCTACTATGTAGTTTTGTCT HS_haplotype2 GCCGCTCGTTAACTACTGTTCAGAGAGATTATTTAAAGTATCTACTATGTAGTTTTGTCT ************************************************************ HS_haplotype1 ATGCAAGAGTGTCAGGACAACTCAGGAGGGAGGCTGATCTTGATCATAGCTATGCTATGG HS_assemblymutate ATGCAAGAGTGTCAGGACAACTCAGGAGGGAGGCTGATCTTGATCATAGCTATGCTATGG HS_haplotype2 ATGACAGAGTGTCAGGACAACTCAGGAGGGAGGCTGATCTTGATCATAGCTTTGCTATGG *** ********************************************** ******** HS_haplotype1 AAGAAAATCAAAAGCAACCCAGCCCACTGCACCATGCCTGACTTTACAAACTGCTGTAAT HS_assemblymutate AAGAAAATCAAAAGCAACCCAGCCCACTGCACCATGCCTGACTTTACAAACTGCTGTAAT HS_haplotype2 AAGAAAATCAAAAGCAACCCAGCCCACTGCACCATGCCTGACTTTACAAACTGCTGTAAT ************************************************************ HS_haplotype1 TGCTGGTCTTTTTACAGCCAGGCAGCCCACTAGTGTGTTCAGCAATCCCAGCAGAGGTGC HS_assemblymutate TGCTGGTCTTTTTACAGCCAGGCAGCCCACTACTTTGTTCAGTAATCCCAGCAGAGGTGC HS_haplotype2 TGCTGGTCTTTTTACAGCCAGGCAGCCCACTACTTTGTTCAGTAATCCCAGCAGAGGTGC ******************************** * ******* ***************** HS_haplotype1 TCTTTACCCCATGAAATTTTCCAAAGAGAGGCAAGGCAGGAATTCCCCCATTATTTTGAA HS_assemblymutate TCTTTACCCCATGAAATTTTCCAAAGAGAGGCAAGGCAGGAATTCCCCCATTATTTTGAA HS_haplotype2 TCTTTACCCCATGAAATTTTCCAAAGAGAGGCAAGGCAGGAATTCCCCCATTATTTTGAA ************************************************************ HS_haplotype1 CCTGGAGAGAACACCTGGAAAAGTGGAAACATTCCCAGGAGGGAACATCTGTGTAAAAAT HS_assemblymutate CCTGGAGAGAAGACCTGGAAAAGTGGAAACATTCCCAGGAGGGAACATCTGTGTAAAAAT HS_haplotype2 CCTGGAGAGAAGACCTGGAAAAGTGGAAACATTCCCAGGAGGAAACATCTGTGTAAAAAT *********** ****************************** ***************** HS_haplotype1 GCTCAATATCGGCCCAGCTCAGAGACATAGCACACATGGCAAGAACCCTAAAGGCATGCA HS_assemblymutate GCTCAATATCGGCCCAGCTCAGAGACATAGCACACATGGCAAGAACCCTAAAGGCATGCA HS_haplotype2 GCTCAATATCGGCCCAGCTCAGAGACATAGCACACATGGCAAGAACCCTAAAGGCATGCA ************************************************************ HS_haplotype1 ACATGATATAACATGTCTGTATTTTTAGAGAATTTCTAAAACATGGAAGATATAATTTTA HS_assemblymutate ACATGATATAACATGTCTGTATTTTTAGAGAATTTCTAAAACATGGAAGATATAATTTTA HS_haplotype2 ACATGATATAACATGTCTGTATTTTTAGAGAATTTCTAAAACATGGAAGATATAATTTTA ************************************************************ HS_haplotype1 TGAACAACTATGAATAATTTTCTACTCAGCTACTCATCCAACAAAGCACTTGAGCTCACC HS_assemblymutate TGAACAACTATGAATAATTTTCTACTCAGCTACTCATCCAACAAAGCACTTGAGCTCACC HS_haplotype2 TGAACAACTATGAATAATTTTCTACTCAGCTACTCATCCAACAAAGCACTTGAGCTCACC ************************************************************ HS_haplotype1 TTTATCTACCACATCAAGACAATTCCGGCTTCCTATATTTTTTGGCATCATCTCTTTATT HS_assemblymutate TTTATCTACCACATCAAGACAATTCCGGCTTCCTATATTTTTTGGCATCATCTCTTTATT HS_haplotype2 TTTATCTACCACATCAAGACAATTCCGGCTTCCTATATTTTTTGGCATCATCTCTTTATT ************************************************************ HS_haplotype1 ATATACTATGTGCAAACAGCTCACTTGGCTCATCACATATTAACATCCTGCTTATTCCAC HS_assemblymutate ATATACTATGTGCAAACAGCTCACTTGGCTCATCACATATTAACATCCTGCCTATTCGAC HS_haplotype2 ATATACTATGTGCAAACAGCTCACTTGGCTCATCACATATTAACATCCTGCCTATTCGAC *************************************************** ***** ** HS_haplotype1 ATGACCTGTCTATACTGCATCTAAAGGATGGTACGTGGCTCTGTCACAAAAGAAATACAA HS_assemblymutate ATGACCTGTCTATACTGCATCTAAAGGATGGTACGTGGCTCTGTCACAAAAGAAATACAA HS_haplotype2 ATGACCTGTCTATACTGCATCTAAAGGATGGTACGTGGCTCTGTCACAAAAGAAATACAA ************************************************************ HS_haplotype1 AGGGGGACGAGGAGTGATGCCACCCGGGCAGATTCTGGAGACTACACATGACAAAACCTG HS_assemblymutate AGGGGGACGAGGAGTGATGCCACCCGGGCAGATTCTGGAGACTACACATGACAAAACCTG HS_haplotype2 AGGGGGACGAGGAGTGATGCCACCCGGGCAGATTCTGGAGACTACACATGACAAAACCTG ************************************************************ HS_haplotype1 GCTCATTACTTTTGAGAGTAAAGCATTCTTTATGATCACGGTGGCACATCTCAACCTGGA HS_assemblymutate GCTCATTACTTTTGAGAGTAAAGCATTCTTTATGATCACGGTGGCACATCTCAACCTGGA HS_haplotype2 GCTCATTACTTTTGAGAGTAAAGCATTCTTTATGATCACGGTGGCACATCTCAACCTGGA ************************************************************ HS_haplotype1 ATCGCACCCAGTACTTCAGTCCTCCAAACTGAGGCATCGAGGCAGGAGAAAATGCCATTC HS_assemblymutate ATCGCACCCAGTACTTCAGTCCTCCAAACTGAGGCATCGAGGCAGGAGAAAATGCCATTC HS_haplotype2 ATCGCACCCAGTACTTCAGTCCTCCAAACTGAGGCATCGAGGCAGGAGAAAATGCCATTC ************************************************************ HS_haplotype1 AGGAGGCTAAAAATTCCATGATCCTTTATTTACACAAAAATTTGCCCCTCTACCTGTAGC HS_assemblymutate AGGAGGCTAAAAATTCCATGATCCTTTATTTACACAAAAATTTGCCCCTCTACCTGTAGC HS_haplotype2 AGGAGGCTAAAAATTCCATGATCCTTTATTTACACAAAAATTTGCCCCTCTACCTGTAGC ************************************************************ HS_haplotype1 CCCACCATATGGTGCGTATCCACTGCTCTGTCCCCCGGCAGGCCCTTACAGTGCCCGGCA HS_assemblymutate CCCACCATATGGTGCGTATCCACTGCTCTGTCCCCCGGCAGGCCCTTACAGTGCCCGGCA HS_haplotype2 ACCACCATATGGTGTGTATCCACTGCTCTGTCCCCCGGCAGGCCCTTACAGTGCCCGGCA ************* ********************************************* HS_haplotype1 AGGCTAGTTAGCTTCAGAGGCCAAGCCCTGTAATTCTGGACTACAGAGCTGGCCATCACC HS_assemblymutate AGGCTAGTTAGCTTCAGAGGCCAAGCCCTGTAATTCTGGACTACAGAGCTGGCCATCACC HS_haplotype2 AGGCTAGTTAGCTTCAGAGGCCAAGCCCTGTAATTCTGGACTACAGAGCTGGCCTTCACC ****************************************************** ***** HS_haplotype1 TTTATTAATGATCCTTTGGGGAGTGCTTTCTTCTCTTCAGAACAGCTGTTACCTTGTTAG HS_assemblymutate TTTATTAATGATCCTTTGGGGAGTGCTTTCTTCTCTTCAGAACAGCTGTTACCTTGTTAG HS_haplotype2 TTTATTAATGATCCTTTGGGGAGTGCTTTCTTCTCTTCAGAACGGCTGTTACCTTGTTAG ******************************************* **************** HS_haplotype1 AAATTGGCTAAAAGGATGTACTCCGTCCACCTCCCCGCCAGGCAGGGGGAAATAAACACA HS_assemblymutate AAATTGGCTAAAAGGATGTACTCCGTCCACCTCCCCGCCAGGCAGGGGGAAATAAACACA HS_haplotype2 AAATTGGCTAAAAGGATGTACTCCGTCCACCTCCCCGCCAGGCAGGGGGAAATAAACACA ************************************************************ HS_haplotype1 GCTGCGGCTAATCTCAGAAGTGCAGGGCACATCATATTGATGAATGTGTTACTGGGAAAG HS_assemblymutate GCTGCGGCTAATCTCAGAAGTGCAGGGCACATCATATTGATGAATGTGTTACTGGGAACG HS_haplotype2 GCTGCGGCTAATCTCAGAAGTGCAGGGCACATCATATTGATGAATGTGTTACTGGGAACG ********************************************************** * HS_haplotype1 GGAATGTAAAGGAGATATCTCAAATTACAAGAGGCAGGAGGCCGGTAAAAGTGTGATCAC HS_assemblymutate GAAATGTAAAGGAGATATCTCAAAAAACAAGAGGCAGGAGGCCGGTAAAAGTGTGGTCAC HS_haplotype2 GAAATGTAAAGGAGATATCTCAAAAAACAAGAGGCAGGAGGCCGGTAAAAGTGTGGTCAC * ********************** ***************************** **** HS_haplotype1 AATAGTGTGAGGTGCAGTGTTCATTCAGACAGAGGTTAAAGCCAGAACAATGAATCACTT HS_assemblymutate AATAGTGTGAGGTGCAGTGTTCATTCAGACAGAGGTTAAAGCCAGAACAATGAATCACTT HS_haplotype2 AATAGTGTGAGGTGCAGTGTTCATTCAGACAGAGGTTAAAGCCAGAACAATGCATCACTT **************************************************** ******* HS_haplotype1 TGTCTCAAAGATGTCAAGGCAGTGTCAGTCAGCCTCAGCTCGCCTAGAGTGAGTGGTCTG HS_assemblymutate TGTCTCAAAGATGTCAAGGCAGTGTCAGTCAGCCTCAGCTCGCCTAGAGTGAGTGGTCTG HS_haplotype2 TGTCTCAAAGATGTCAAGGCAGTGTCAGTCAGCCTCAGCTGGCCTAGAGTGAGTGGTCTG **************************************** ******************* HS_haplotype1 CAGCGCCACATCAGCTGCGTGGTCTTTTATCTAAAAACTTTAAAAACAGCTAATTGAAGC HS_assemblymutate CAGCGCCACATCAGCTGCGTGGTCTTTTATCTAAAAACTTTAAAAACAGCTAATTGAAGC HS_haplotype2 CAGCGCCACATAAGCTGCGTGGTCTTTTATCTAAAAACTTTAAAAACAGCTAATTGAAGC *********** ************************************************ HS_haplotype1 ATCTCCAGAGCAGTCGGGCCTAAGTGCCACGACCAATAATCGTAGAAATAATTATGGTCC HS_assemblymutate ATCTCCAGAGCAGTCGGGCCTAAGTGCCACGACCAATAATCGTAGAATTAATTCTGGTCC HS_haplotype2 ATCTCCAGAGCAGTCGGGCCTAAGTGCCACGACCAATAATCGTAGAATTAATTCTGGTCC *********************************************** ***** ****** HS_haplotype1 CCGTCTACTTGGATCTGGCCGGCGGAAGTCACTTGAGCACTTTGGGTGCAGCCGAAGTTT HS_assemblymutate CCGTCTACTTGGATCTGGCCGGCGGAAGTCACTTGAGCACTTTGGGTGCAGCCGAAGTTT HS_haplotype2 CCGTCTACTTGGATCTGGCCGGCGGAAGTCACTTGAGCACTTTGGGTGCAGCCGAAGTTT ************************************************************ HS_haplotype1 ATAGGCCCCGTGGATAATAACTTGATCCCTCCTTTCCCCAGACTGCTGGGAAGGGAGAAA HS_assemblymutate ATAGGCCCCGTGGATAATAACTTGATCCCTCCTTTCCCCAGACTGCTGGGAAGGGAGAAA HS_haplotype2 ATAGGCCCCGTGGATAATAACTTGATCCCTCCTTTCCCCAGACTGCTGGGAAGGGAGAAA ************************************************************ HS_haplotype1 AATACTATAGATATTGTTTGTTTTAATTTGACGCAACCTATCCTGTACTCGTGAGCCCCT HS_assemblymutate AATACTATAGATATTGTTTGTTTTAATTTGACGCAACCTATCCTGTACTCGTGAGCCCCT HS_haplotype2 ATTACTATAGATATTGTTTGTTTTAATTTGACGCAACCTATCCTGTACTCGTGAGCCCCT * ********************************************************** HS_haplotype1 CCCCCTTTAATACATTTCGTTTCAAAATATTTGCTGGGTTCACTCCAGGTTTATGACCAT HS_assemblymutate CCCCCTTTAATACATTTCGTTTCAAAATATTTGCTGGGTTCACTCCAGGTTTATGACGAT HS_haplotype2 CCCCCTTTAATACATTTTGTTTCAAAATATTTGCTGGGTTCACTCCAGGTTTATGACGAT ***************** *************************************** ** HS_haplotype1 GAGATCCAAGTCCCGCAGGCAGGCGCCTCAGCACTCTGTATAACTGATCCCAGAAGCTAA HS_assemblymutate GAGATCCAATTCCCGCAGGCAGGCGCCTCAGCACTCTATATAACTGATCCCAGAAGCTTA HS_haplotype2 GAGATCCAATTCCCGCAGGCAGGCGCCTCAGCACTCTATATAACTGATCCCAGAAGCTTA ********* *************************** ******************** * HS_haplotype1 CTTCATGATGGGATATCCCTTCATTCATCACATACGCTAGCTGGGCCCACCAACCTTATG HS_assemblymutate CTTCATGATGGGATATCGCTTCATTCATCACATACGCTAGCTGGGCCCACCAACCTTATG HS_haplotype2 CTTCATGATGGGATATCGCTTCATTCATCACATACGCTAGCTGGGCCCACCAACCTTATG ***************** ****************************************** HS_haplotype1 ATGACAATGATTAAGGAAGAACCAGGCAGGTCCACCCGGCTGTGTCCCATGTTTCCTTTT HS_assemblymutate ATGACAATGATTAAGGAAGAACCAGGCAGGTCCACCCGGCTGTGTCCCATGTTTCCTTTT HS_haplotype2 ATGACAATGATTAAGGAAGAACCAGGCAGGTCCACCCGGCTGTGTCCCATGTTTCCTTTT ************************************************************ HS_haplotype1 ATTATATTTTCTTAAGGTGCATGATGGATGAATAGGTAGAACAAATTGTGAGGGAGCCAC HS_assemblymutate ATTATATTTTCTTAAGGTGCATGATGGATGAATAGGTAGAACAAATTGTGAGGGAGCCAC HS_haplotype2 ATTATATTTTCTTAAGGTGCATGATGGATGAATAGGTAGAACAAATTGGGAGGGACCCAC ************************************************ ****** **** HS_haplotype1 TGGATGTGATATGTTACTTACTTCCCTTTTTTAAATTGGCTCCATTAGATTTTCTTTTGT HS_assemblymutate TGGATGTGATATGTTACTTACTTCCCTTTTTTAAATTGGCTCCATTAGATTTTCTTTTGT HS_haplotype2 TGGATGTGATATGTTACTTACTTCCCTTTTTTAAATTGGCTCCATTAGATTTTCTTTTGT ************************************************************ HS_haplotype1 GTGTGTAAAAATTAAGCCCGAGGCCAGAATGAGAGTGGCTCAACTCCTTGTCAGATTTCC HS_assemblymutate GTGTGTAAAAATTAAGCCCGAGGCCAGAATGAGAGTGGCTCAACTCCTTGTCAGATTTCC HS_haplotype2 GTGTGTAAAAATTAAGCCCGAGGCCAGAATGAGAGTGGCTCAACTCCTTTTCAGATTTCC ************************************************* ********** HS_haplotype1 CTGTCTACCAAATGGCAGATAAATAAGAGGGGAAAACTGGAGTAATTGGTTAAGGGAGGC HS_assemblymutate CTGTCTACCAAATGGCAGATAAATAAGAGGGGAAAACTGGAGTAATTGGTTAAGGGAGGC HS_haplotype2 CTGTCTACGAAATGGCAGATAAATAAGAGGGGAAAACTCGAGTAATTGGTTAAGGGAGGC ******** ***************************** ********************* HS_haplotype1 ATGGCGTGAAAATAGATGGTTTTCCTCAAACCTTTTCTTCCTAGGTCCAACAATGTGTAA HS_assemblymutate ATGGCGTGAAAATAGATGGTTTTCCTCAAACCTTTTCTTCCTAGGTCCAACAATGTGTAA HS_haplotype2 ATGGCGTGAATATAGATGGTTTTCCTCAAACCTTTTCTTCCTAGGTCCAACAATGTCTAA ********** ********************************************* *** HS_haplotype1 GCACTCAACTCCCTTAGTGTCTCCTATGTATGTTTAAAGTTAAAATAAAATTTTGCAGGA HS_assemblymutate GCACTCAACTCCCTTAGTGTCTCCTATGTATGTTTAAAGTTAAAATAAAATTTTGCAGGA HS_haplotype2 GCACTCAACTCCCTTAGTGTCTCCTATGTATGTTTAAAGTTAAAATAAAATTTTGCAGGA ************************************************************ HS_haplotype1 AGAGACACCCTGGGCTTCCTTGAGGCTGCGAGCTTACAACGGCAGCCTCTTTTTAGTTTG HS_assemblymutate AGAGACACCCTGGGCTTCCTTGAGGCTGCGAGCTTACAACGGCAGCCTCTTTTTAGTTTG HS_haplotype2 AGAGACACCCTGGGCTTCCTTGAGGCTGGGAGCTTACAACGGCAGCCTCTTTTTAGTTTG **************************** ******************************* HS_haplotype1 TCACTCCGGCCTCGGCTAACAATGATAGACACTCCTGGGCTGAAACCTCCTGCTCTGCCT HS_assemblymutate TCACTCCGGCCTCGGCTAACAATGATAGACACTCCTGGGCTGAAACCTCCTGCTCTGCCT HS_haplotype2 TCGCTCCGGCCTCGGCTAACAATGATAGACACTCCTGGGCTGAAACCTCCTGCTCTGCCT ** ********************************************************* HS_haplotype1 AAGTAAAAATCACCCCAACCCACACATATGCACCGGCACGTTTTTTAGTAGTTTTACACA HS_assemblymutate AAGTAAAAATCACCCCAACCCACACATATGCACCGGCACGTTTTTTAGTAGTTTTACACA HS_haplotype2 AAGTAAAAATCACCCCAAGCCACACATATGCACCGGCACGTTTTTTAGTAGTTTTACACA ****************** ***************************************** HS_haplotype1 TTTGAGATCGCACAGCTTTCATTATAGCATAGGAAGGTGCTATACAAAGGGGTGGCTCAT HS_assemblymutate TTTGAGATCGCACAGCTTTCATTATAGCATAGGAAGGTGCTATACAAAGGGGTGGCTCAT HS_haplotype2 TTTGAGATCGCACAGCTCTCATTATAGCATAGGAAGGTGCTATACAAAGGGGTGGCTCAT ***************** ****************************************** HS_haplotype1 CCCTCAGTTACACTGATAATATTAAGAGAAGCTCAGTAGACTTGCACGCTCAGTTGCTTG HS_assemblymutate CCCTCAGTTACACTGATAATATTAAGAGAAGCTCAGTAGACTTGCACGCTCAGTTGCTTG HS_haplotype2 CCCTCAGTTACACTGATAATATTAAGAGAAGCTCAGTAGACTTGCACGCTCAGTTGCTTG ************************************************************ HS_haplotype1 ATGTATAACAAGTGGAAGCAAAAACTTGTGTGAACCTCCTCAGCTCCAGAGGCCCTGGCT HS_assemblymutate ATGTATAGCAAGTGGAAGCAGAAACTTGTGTGAACCTCCTCAGCTCCAGAGGCCCTGGCT HS_haplotype2 ATGTATAGCAAGTGGAAGCAGAAACTTGTGTGAACCTCCTCAGCTCCAGAGGCCCTGGCT ******* ************ *************************************** HS_haplotype1 AGTAGCTCCTGGGATACCACTGAGGATTACACTGGTGGGCTGCAGGGAACTCAAGGACAA HS_assemblymutate AGTAGCTCCTGGGATACCACTGAGGATTACACTGGTGGGCTGCAGACAACTCAAGGACAA HS_haplotype2 AGTAGCTCCTGGGATACCACTGAGGATTACACTGGTGGGCTGCAGACAACTCAAGGACAA ********************************************* ************* HS_haplotype1 GTTTGAAGAGTTTCCTTCATCACAGCAAGTGTTAAATTCACATTTTTGTCTTGTAATACC HS_assemblymutate GTTTGAAGAGTTTCCTTCATCACAGCAAGTGTTAAATTCACATTTTTGTCTTGCAATACC HS_haplotype2 GTTTGAAGAGTTTCCTTCACCACAGCAAGTGTTAAATTCACATTTTTGTCTTGCAATACC ******************* ********************************* ****** HS_haplotype1 ATGCTCTACTTCACCTGGGCCTCCCCGATATCTGCAGTCTGAGGAGCCAGTTTGTGGTTG HS_assemblymutate ATGCTCTACTTCACCTGGGCCTCCCCGATATCTGCAGTCTGATGAGCCAGTTTGTGGTTG HS_haplotype2 ATGCTCTACTTCACCTGGGCCTCCCCGATATCTGCAGTCTGATGAGCCAGTTTGTGGTTG ****************************************** ***************** HS_haplotype1 TGTCTTTGACTCCAAAACATGTGAAGGCATGTCATGTGGTGAAATACACCCGCTCTAGCT HS_assemblymutate TGTCTTTGACTCCAAAACATGTGAAGGCATGTCATGTGGTGAAATACACCCGCTCTAGCT HS_haplotype2 TGTCTTTGACTCCAAAACATGTGAAGGCATGTCATGTGGTGAAATACACCCGCTCTAGCT ************************************************************ HS_haplotype1 GGGGTTGAGACCTACAAATTAAACAATGAATTGTCCCCACAGCCTACAACGTACCTTGCC HS_assemblymutate GGGGTTGAGACCTACAAATTAAACAATGAATTGTCCCCACTGCCTACAACGTACCTTGTC HS_haplotype2 GGGGTTGAGACCTACAAATTAAACAATGAATTGTCCCCACTGCCTACAACGTACCTTGTC **************************************** ***************** * HS_haplotype1 CGACCTTTACCTCAGCTGTATAAGCATGAGTCAGGTATCAACACAATAGAGATTTATGAT HS_assemblymutate CGACCTTTACCTCAGCTGTATAAGCATGAGTCAGGTATCAACACAATAGAGATTTATGAT HS_haplotype2 CGACCTTTACCTCAGCTGTATAAGCATGAGTCAGGTATCAACACCATAGAGATTTATGAT ******************************************** *************** HS_haplotype1 ATAATAATGCAAAAAATTCAGTATAAATATAGCTGTCGATCATTTCTGCCATCAGTAATC HS_assemblymutate ATAATAATGCAAAAAATTCAGTATAAATATAGCTGTGGATCATTTCTGCCATCAGTAATC HS_haplotype2 ATAATAATGCAAAAAATTCAGTATAAATATAGCTGTGGATCATTTCTGCCATCAGTAATC ************************************ *********************** HS_haplotype1 CTTAGGATCTTTTTAAGTATATATCAGAATCTAGCATAAATGCATCCTTCCAAACTAGAT HS_assemblymutate CTTAGGATCTTTTTAAGTATATATCAGAATCTAGCATAAATGCATCCTTCCAAACTAGAT HS_haplotype2 CTTAGGATCTTTTTAAGTATATATCAGAATCTAACATAAATGCATCCTTCCAAACTAGAG ********************************* ************************* HS_haplotype1 CAAGCAGCTAGATCACTTTACTGTGAATTCCAACCTATATGAAGGACAAATTCTAATGGT HS_assemblymutate CAAGCAGCTAGATCACTTTACTGTGAATTCCAACCTATATGAAGGACAAATTCTAATGGT HS_haplotype2 CAAGCAGCTAGATCCCTTGACTGTGAATTCCTACCTATATGAAGGACAAATTCTAATGGT ************** *** ************ **************************** HS_haplotype1 TTCGCTTCCCTCCCGGGGTCTAAGCCTCCCGTCTTGAGTCATATTCGTATGGGTGTGTGC HS_assemblymutate TTCGCTTCCCTCCCGGGGTCTAAGCCTCCCGTCTTGAGTCATATTCGTATGGGTGTGTGC HS_haplotype2 TTCGCTTCCCTCCCGGGGTCTAAGCCTCCCGTCTTGAGTCATATTCGTATGGGTGTGTGC ************************************************************ HS_haplotype1 AATTGTTAGATACCTGACAGGAGGAAACAAAAAAACCAGAAAGGCAGGGTCAGCCTGGCA HS_assemblymutate AATTGTTAGATACCTGACAGGAGGAAACAAAAAAACCAGAAAGGCAGGGTCAACCTGGCA HS_haplotype2 AATTGTTAGATACCTGACAGGAGGAAACAAAAAAACCAGAAAGGCAGGGTCAACCTGGCA **************************************************** ******* HS_haplotype1 GATGGGCTCTGAACAACTGGTTAGCAATTTAGTTGCCATGCCGAGCCAATACTGTTTCCT HS_assemblymutate GATGGGCTCTGAACA-CTGGTTAGCAATTTAGTTGCCATGCCGAGCCAATACTGTTTCCT HS_haplotype2 GATGGGCTCTGAACATCTGGTTAGCAATTTAGTTGCCATGCCGAGCCAATACTGTTTCCT *************** ******************************************** HS_haplotype1 GAGGTGTGCCTTGCTGACACTTGCAATCTATTCAAAAAGATAATTAAGATAAGAGGAAAT HS_assemblymutate GAGGTGTGCCTTGCTGACACTTGCAATCTATTCAAAAAGATAATTAAGATAAGAGGAAAT HS_haplotype2 GAGGTCTGCCCTGCTGACACTTGCAATCTATTCAAAAAGATAATTAAGATAAGAGGAAAT ***** **** ************************************************* HS_haplotype1 CAACCCTCCTCAGGTGTGAGTATAGAGACGCAGCTGAAAAATAATGCTTCACGACGCCTA HS_assemblymutate CAACCCTCCTCAGGTGTGAGTATAGAGACGCAGCTGAAAAATAATGCTTCACGACGACTA HS_haplotype2 CAACCCTCCTCAGGTGTGTGTATAGAGACGCAGCTGAAAAATAATGCTTCACGACGACTA ****************** ************************************* *** HS_haplotype1 ACTTAAAGGGTATTATTTTTATTTAAATAATTAGATCATGGTGCTTGTCTTCTAGTGGGC HS_assemblymutate ACTTAAAGGGTATTATTTTTATTTAAATAATTAGATCATGGTGCTTGTCTTCTAGTGGGC HS_haplotype2 ACTTAAAGGGTATTATTTTTATTTAAATAATTAGATCATGGTGCTTGTCTTCTAGTGGGC ************************************************************ HS_haplotype1 TCTTGCCTGTGTCAGGGCCACGATTCCTTCAGGAAGATAAAGTGTTAACCCTGTAAAGTG HS_assemblymutate TCTTGCCTGTGTCAGGGCCACGATTCCTTCAGGAAGATAAAGTGTTAACCCTGTAAAGTG HS_haplotype2 TCTTGCCTGTGTCAGGGCCACGATTCCTTCAGGAAGATAAAGTGTTAACCCTGTAAAGTG ************************************************************ HS_haplotype1 AATTTGGAGCAGCAAAAGCAATGTGTGGAGTTCTAAGTCACATGATCTGTTCAAATAAAC HS_assemblymutate AATTTGGAGCAGCTAAAGCAATGTGTGGAGTTCTAAGTCACATGATCTGTTCAAATAAAC HS_haplotype2 AATTTGGAGCAGCTAAAGCAATGTGTGGAGTTCTAAGTCACATGATCTGTTCAAATAAAC ************* ********************************************** HS_haplotype1 AGCGTCATGAAAACTCATAGCCTGTGTGGCCAGGTAGGACCACATGGCCATGGTATGGCT HS_assemblymutate AGCGTCATGAAAACTCATAGCCTGTGTGGCCAGGTAGGACCACATGGCCATGGTATGGCT HS_haplotype2 AGCGTCATGAAAACTCATAGCCTGTGTGGCCAGGTAGGACCACATGGCCATGGTATGGCT ************************************************************ HS_haplotype1 GCTGTGTCCCGGGGTTTCATGATTTCCCCACCAAGACTTCAACTCCCCCAGGACCCCCGC HS_assemblymutate GCTGTGTCCCGGGGTTTCATGATTTCCCCACCAAGACTTCAACTCCCCCAGGACCCCCGC HS_haplotype2 GCTGTGTCCCCGGGTTTCATGATTTCCCCACCAAGACTTCAACTCCCCCAGGACCCCCGC ********** ************************************************* HS_haplotype1 CGTGGTGTATTTCTAGGGAACAGGTCAGAGGGGGACCTCAACTTTTTAACGAAGCATGCA HS_assemblymutate CGTGGTGTATTTCTAGGGAACAGGTCAGAGGGGGACCTCAACTTTTTAACGAAGCATGCA HS_haplotype2 CGTGGTGTATTTCTAGGGAACAGGTCAGAGGGGGACCTCAAATTTTTAACGAAGCATGCA ***************************************** ****************** HS_haplotype1 GAGAAGAAAGGGGGATTAATTTTTTCCCAAATGTACCCCAGCTAACTTTTTTTTGCCACC HS_assemblymutate GAGAAGAAAGGGAGATTAATTTTTTCCCAAATGTACCCCAGCTAACTTTTTTTTGCCACC HS_haplotype2 GAGAAGAAAGGGAGATTAATTTTTTCCCAAATGTACCCCAGCTAACTTTTTTTTGCCACC ************ *********************************************** HS_haplotype1 TCTGGACTTTAGACAAAAACTCCGAGGGAGTCCAATCCACGTGATGGATTGGCAGGCCAG HS_assemblymutate TCTCGACTTTAGACAAAAACTCCGAGGGAGCCCAATCCACGTGATGGATTGGCAGGCCAG HS_haplotype2 TCTCGACTTTAGACAAAAACTCCGAGGGAGCCCAATCCACGTGATGGATTGGCAGGCCAG *** ************************** ***************************** HS_haplotype1 GCACAGCAGCTACCAACTAAATATAAAAACACTCACGTACTTCATCAATTTCTTTGTAAC HS_assemblymutate GCACAGCAGCTACCAACTAAATATAAAAACACTCAAGTACTTCATCAATATCTTTGTAAC HS_haplotype2 GCACAGCAGCTACCAACTAAATATAAAAACACTCAAGTACTTCATCAATATCTTTGTAAC *********************************** ************* ********** HS_haplotype1 ATCACCAAGTATCTTGTTCTCAGTTGCTTCTAAGTGAACTTACAGAATCAAATTAACTTC HS_assemblymutate ATCACCAAGTATCTTGTCCTCAGTTGCTTCTAAGTGAACTTACAGAATCAAATTAACTTC HS_haplotype2 ATCACCAAGTATCTTGTCCTCAGTTGCTTCTAAGTGAACTTACATAATCAAATTAACTTC ***************** ************************** *************** HS_haplotype1 AGCCTGGCAACATGTGAATTGCCAACCAAAAGCTGTCTCTCTACTGATCATAAAGACATT HS_assemblymutate AGCCTGGCAACATGTGAATTGCCAACCAAAAGCTGTCTCTCTACTGATCATAAAGACATT HS_haplotype2 AGCCTGGCAACATATGAATTGCCAACCAAAAGCTGTCTCTCTACTGATCATAAAGACATT ************* ********************************************** HS_haplotype1 TATTCCTGACTGGTGGGGTGCCTTGTGATCTAGTCAAATTTCAGGGTGGCACGTGCGGCG HS_assemblymutate TATTCCTGACTGGTGGGGTGCCTTGTGATCTAGTCAAATTTCAGGGTGGCACGTGCGGCG HS_haplotype2 TATTCCTGACTGGTGGGGTGCCTTGTGATCTAGTCAAATTTCAGGGTGGCACGTGCGGCG ************************************************************ HS_haplotype1 TGAGCCAGTGCAGGAGGCCAGACACTTTGGGGCAATCCTTCTGGACTTAATGGAGTGCTG HS_assemblymutate TGAGCCAGTGCAGGAGGCCAGACACTTTGGGGCAATCCTTCTGGACTTAATGGAGTGCTG HS_haplotype2 TGAGCCAGTGCAGGAGGCCAGACACTTTGGGGAAATCCTTCTGGACTTAATGGAGTGCTG ******************************** *************************** HS_haplotype1 ATGAAAACAGAATTTTAATCGGATTGTCACCCTCTCCTCCCAACTTAAAGTGGAGTTACA HS_assemblymutate ATGAAAACAGAATTTTAATCGGATTGTCACCCTCTCCTCCCAACTTAAAGTGGAGTGACA HS_haplotype2 ATGAAAACAGAATTTTAATCGGATTGTCACCCTCTCCTCCCAACTTAAAGTGGAGTGACA ******************************************************** *** HS_haplotype1 TGGTGCACCCCAGGTGCCGGTACTGTGCAAGAAATGGAGAGAGGCAGTGCTGGGCTCGGG HS_assemblymutate TGGTGAACCCCAGGTGCCGGTACTGTGCAAGAAATGGAGAGAGGCAGTGCTGGGCTCGGG HS_haplotype2 TGGTGAACCCCAGGTGCCGGTACTGTGCAAGAAATGGAGAGAGGCAGTGCTGGGCTCGGG ***** ****************************************************** HS_haplotype1 GCCCCTAACTTGTGGTGTAAAATAATTTTTAAAAAAAATCTTCTCCTGCCCAGACCCCTG HS_assemblymutate GCCTCTACCTTGTGGTGTAAAATAATTTTTAAAAATAATGTTCTCGTGCCCAGACCCCTG HS_haplotype2 GCCTCTACCTTGTGGTGTAAAATAATTTTTAAAAATAATGTTCTCGTGCCCAGACCCCTG *** *** *************************** *** ***** ************** HS_haplotype1 GGACTATTTATGCTGGCACACCCTTGTTTAAGGGTTATTCGTGGCTGGACAGAGGGTGTG HS_assemblymutate GGACTATTTATGCTGGCACACCCTTGTTTAAGGGTTATTCGTGGCTGGACAGAGGGTGTG HS_haplotype2 GGACTATTTATGCTGGCACACCCTTGTTTAAGGGTAATTCGTGGCTGGACAGAGGGTGTG *********************************** ************************ HS_haplotype1 GTATTATTCCAGTAAACACAGGATAGTGATCTGCTTGCTTGCTTCCCAAA--TTAGATGG HS_assemblymutate GTATTATTCCAGTAAACACAGGATAGTGATCTGCTTGCTTGCTTCCCAAACTTTAGATGG HS_haplotype2 GTATTATTCCAGTAAACACAGGATAGTGATCTGCTTGATTGCTTCCCAAA--TTAGATGG ************************************* ************ ******** HS_haplotype1 GGGAGGGAGAGGTGAGCTTCCAGGCGGGGCCTCCCGACTGCAATTTCCCAAGCAAAAAGA HS_assemblymutate GGGAGGGAGAGGTGAGCTTCCAGGCGGGGCCTCCCGACTGCAATTTCCCAAGCAAAAAGA HS_haplotype2 GGGAGGGAGAGGTGAGCTTCCAGGCGGGGCCTCCCGACTGCAATTTCCCAAGCAAAAAGA ************************************************************ HS_haplotype1 AATTACCCTATCATGGTCTTCAAAACTTCCTCTAGACTCCTTCTGCCTTCCATAAAATCA HS_assemblymutate AATTACCCTATCATAGTCCTCAAAACTGCCTCTAGACTACTTCTGCCTTCCATAAAATCA HS_haplotype2 AATTACCCTATCATAGTCCTCAAAACTGCCTCTAGACTACTTCTGCCTTCCATAAAATCA ************** *** ******** ********** ********************* HS_haplotype1 CCAGCTGTGTGAAGCCCAGGAGACTGTGCTGTCTTGAATATTGAATTTGTTAGGGACCAG HS_assemblymutate CCAGCTGTGTGAAGCCCAGGAGACTGTGCTGTCTTGAATATTGAATTTGTTAGGGACCAG HS_haplotype2 CCAGCTGTGTGAAGCCCAGGAGACTGTGCTGTCTTGAATATTGAATTTGTTAGGGACCAG ************************************************************ HS_haplotype1 ATACCCTACTCGCAACCTTGGGATCCTCCTCCCTGGCGCCCGGTCAGTGAGCTGCACATT HS_assemblymutate CTACCCTACTAGCAACCTTGGGATCCTCCTCCCTGGCGCCCGGTCAGTGAGCTGCACATT HS_haplotype2 CTACCCTACTAGCAACCTTGGGATCCTCCTCCCTGGCGCCCGGTCAGTGAGCTGCACATT ********* ************************************************* HS_haplotype1 TTTATATAAAAAGAAATCTTGCATTCATGATTCTACTTCCTCAGACCTGAGGCCACCCGT HS_assemblymutate TTTATATAAAAAGAAATCTTGCATTCATGATTCTACTTCCTCAGACCTGAGGCCACCCGG HS_haplotype2 TTTATATAAAAAGAAATCTTGCATTCATGATTCTACTTCCTCAGACCTGAGGCCACCCGG *********************************************************** HS_haplotype1 GGAGGAGAGCTTGAATACCCTAAGATACCATTTTCCTGCCCAGGGTTGGTTTTTTTACCA HS_assemblymutate GGAGGAGAGCTTGAATACCCTAAGATACCATTTTCCTGCCCAGGGTTGGTTTTTTTACCA HS_haplotype2 GGAGGAGAGCTTGAATACCCTAAGATACCATTTTCCTGCCCAGGGTTGGTTTTTTTACCA ************************************************************ HS_haplotype1 CTCCTGTAGTCACACTGCATTATTTGTTCACACATTTTGGGCAGATATTATAGATTGGAC HS_assemblymutate CTCCTGTAGTCACACTGCATTATTTGTTCACACATTTTGGGCAGATATTATAGATTGGAC HS_haplotype2 CTCCTGTAGTCACACTGCATTATTTGTTCACACATTTTGGGCAGATATTATAGATTGGAC ************************************************************ HS_haplotype1 TACCTAAGTCATCAAAAATTTCCCACTCACAGTATTTAATTTTTAAATGGCCTTCCAGCC HS_assemblymutate TACCTAAGTCAACAAAAATTTCCCACTCACAGTATTTAATTTTTAAATGGCCTTCCAGCC HS_haplotype2 TACCTAAGTGAACAAAAATTTCCCACTCACAGTATTTAATTTTTAAATGGCCTTCCAGCC ********* * ************************************************ HS_haplotype1 TGGCTGTAACAGCTACTCTAGTGCTGTATGCAAACCCCGCCGGAAGTTGACTGCACTGCA HS_assemblymutate TGGCTGTAACAGCTACTCTAGTGCTGTATGCAAACCCCGCCGGAAGTTGACTGCACTGCA HS_haplotype2 TGGCTGTAACAGCTACTCTAGTGCTCTATGCAAACCCCGCCGGAAGTTGACTGCACTGCA ************************* ********************************** HS_haplotype1 CACAATCCCTACCTAAGAAACTTTAGGTGGTTGTTACTGTGACATGGGGAATGATCACAA HS_assemblymutate CACAATCCCTACCTAAGAAACTTTAGGTGGTTGTTACTGTGACATGGGGAATGATTACAA HS_haplotype2 CACAATCCCTACCTAAGAAACTTTAGGTGGTTGTTACTGTGACATGGGGAATGATTACAA ******************************************************* **** HS_haplotype1 AATATATTATGACAGCCCAGTCCTCTGATTTTTTTGGGAACGTCCAGAGAGGCAGAGCTT HS_assemblymutate AATATATTATGACAGCCCAGTCCTCTGATTTTTTTGGGAACGTCCAGAGAGGCAGAGCTT HS_haplotype2 AATATATTATGACAGCCCAGTCCTCTGATTTTTTTGGGAACGTCCAGAGAGGCAGAGCTT ************************************************************ HS_haplotype1 CTGACCGCGCCATCAACTTTTAAGGGGGCACAAAATGGCTTCCTTTCTGTGTTCTACAGT HS_assemblymutate CTGACCGCGCCATCAACTTTTAAGGGGGCACAAAATGGCTTCCTTTCTGTGTTCTACAGT HS_haplotype2 CTGACCGCGCCATCAACTTTTAAGGGGGCACAAAATGGCTTCCTTTCTGTGTTCTACAGT ************************************************************ HS_haplotype1 TTTGGCCAGGCTCCCGGCGTGAGACACTTCAAATTCTTAATAAGGTTTGACTGTAGTGAA HS_assemblymutate TTTGGCCAGGCTCCCGGCGTGAGACACTTCAAATTCTTAATAAGGTTTGACTGTAGTGAA HS_haplotype2 TTTGGCCAGGCTCCCGGCGTGAGACACTTCAAATTCTTAATAAGGTTTGACTGTAGTGAA ************************************************************ HS_haplotype1 AAACTGATGAGACCATAGATTATTCCATTTATTATGTGGGTTTTAGTCCAGCCCGGGAGC HS_assemblymutate AAACTGATGAGACCATAGATTATTCCATTTATTATGTGGGTTTTAGTCCAGCCCGGGAGC HS_haplotype2 AAACTGATGAGACCATAGATTATTCCATTTATTATGTGGGTTTTAGTCCAGCCCGGGAGC ************************************************************ HS_haplotype1 TGGAAGACTCGGGCATGGAAGGGATTCAGTCTCTGAATTCTAGCAGTGGCCTCCCAAACA HS_assemblymutate TGGAAGACTCGGGCATGGAAGGGATTCAGTCTCTGAATTCTAGCAGTGGCCTCCCAAACA HS_haplotype2 TGGAAGACTCGGGCATGGAAGGGATTCAGTCTCTGAATTCTAGCAGTGGCCTCCCAAACA ************************************************************ HS_haplotype1 AAAAATTGGCCACCGCACCACTGATATAATTTTAATCCACTACTGCGGAGGTGGGTGAGG HS_assemblymutate AAAAATTGGCCACCGCACCACTGATATAATTTTAATCCACTACTGCGGAGGTGGGTGAGG HS_haplotype2 AAAAATTGGCCACCGCACCACTGATATAATTTTAATCCACTACTGCGGAGCTGGGTGAGG ************************************************** ********* HS_haplotype1 CCTTGTAGCTCTACACTTCTTTGTGTGACCAG------------GCTGCCGGGAGAGCTC HS_assemblymutate CCTTGTAGCTCTACACTTCTTTGTGTGACCAGTAAACCCCCATTGCTGCCGGGAGAGCTC HS_haplotype2 CCTTGTAGCTCTACAGTTCTATGTGTGACCAG------------GCTGCCGGGAGAGCTC *************** **** *********** **************** HS_haplotype1 ACTTCCATCAACATTTAGTAGGGGGGTTTACTGTGTAATACTCTTGACAATGAAATTGAA HS_assemblymutate ACTTCCATCAACATTTAGTAGGGGGGTTTACTGTGTAATACTCTTGACAATGAAATTGAA HS_haplotype2 ACTTCCATCAACATTTAGTAGGGGGGTTTACTGTGTAATACTCCTGACAATGAAATTGAA ******************************************* **************** HS_haplotype1 GGATTTGTTTTAATGGAGCTCAAATAGACAGGGGTTCTGAAAGTTGCACTGATGCCGGAA HS_assemblymutate GGATTTGTTTTAATGGAGCTCAAATAGACAGGGGTTCTGAAAGTTGCACTGATGCCGGAA HS_haplotype2 GGATTTGTTTTAATGGAGCTCAAATAGACAGGGGTTCTGAAAGTTGCACTGATGCCGGAA ************************************************************ HS_haplotype1 AATGAAGCAAAATTAGCTGTGACCAGTGAAAGCAGCAAACCTTTGGCCTAGATAACCTGG HS_assemblymutate AATGAAGCAAAATTAGCTGTGACCAGTGAAAGCAGCAAACCTTTGGCCTAGATAACCTGG HS_haplotype2 AATGAAGCAAAATTAGCTGTGACCAGTGAAAGCAGCAAACCTTTGGCCTAGATAACCTGG ************************************************************ HS_haplotype1 ATGGTAAATCTAGGAGATTTGTCACCTGCCTCCTCAGCTTGGAAATGCCCAGTTCAATAA HS_assemblymutate ATGGTAAATCTAGGAGATTTGTCACCTGCCTCCTCAGCTTGGAAATGCCCAGTTCAATAA HS_haplotype2 ATGCTAAATCTAGGAGATTTGTCACCTGCCTCCTCAGCTTGGAAATGCCCAGTTCAATAA *** ******************************************************** HS_haplotype1 ACCAGGCCCAGGAGAGACTCATTTGTTACTTTGGACAGCCTGTTGGCAGGAGAAGGTTTA HS_assemblymutate ACCAGGCCCAGGAGAGACTCATTTGTTACTTTGGACAGCCTGTTGGCAGGAGAAGGTTTA HS_haplotype2 ACCTGGCCCAGGAGAGACTCATTTGTTACTTTGGACAGCCTGTTGGCAGGAGAAGGTTTA *** ******************************************************** HS_haplotype1 AACCTGCTAATCTATCCAACATCATACAAAAGCACATATTAACTGACCTTCATCGAGATT HS_assemblymutate AACCTGCTAATCTATCCAACATCATACAAAAGCACATATTAACTGACCTTTATCGAGATT HS_haplotype2 AACCTGCTAATCTATCCAATATCATACAAAAGCACATATTAACTGACCTTTATCGAGATT ******************* ****************************** ********* HS_haplotype1 CAATAGCTATTAAACCCCCACAGAAGAAAGGTTTGTGTAAGGTGGGATACTAGGGATGGT HS_assemblymutate CAATAGCTATTAAACCCCCACAGAAGTAAGGTTTGTGTAAGGTGGGATACTAGGGATGGT HS_haplotype2 CAATAGCCATTAAACCCCCACAAAAGTAAGGTTTGTGTAAGGTGGGATACTAGGGATGGT ******* ************** *** ********************************* HS_haplotype1 GGCTGGGAAAGGGGTGGCCAGTGAAAAATACATACTAAATTGCTTCTCCCGCCAACATTT HS_assemblymutate GGCTGGGAAAGGGGTGGCCAGTTAAAAATACATACTAAATTGCTTCTCCCGCCAACATTT HS_haplotype2 GGCTGGGAAAGGGGTGGCCAGTTAAAAATACATACTAAATTGCTTCTCCCGCCAACATTT ********************** ************************************* HS_haplotype1 GAG--CTAGGACTCTGCTATAGTGCATAGTATATCGTTTGGGACTGGTCCAGAATAGTCT HS_assemblymutate GAGCCCTAGGACTCTGCTTTTGTGCATAGTATATCGTTTGGGACTGGTCCAGAATAGTCT HS_haplotype2 GAG--CTAGGACTCTGCTTTTGTGCATAGTATATCGTTTGGGACTGGTCCAGAATAGTCT *** ************* * *************************************** HS_haplotype1 CCTGGAGATATTAAATAGTTACTCAGAATGTAATCCACTGCTTCTTCCTGGGCTCCAACC HS_assemblymutate CCTGGAGATATTACATAGTTACTCAGAATGTAATCCACTGCTTCTTCCTGGGCTCCAACC HS_haplotype2 CCTGGAGATATTACATAGTTACTCAGAATGTAATCCACTGCTTCTTCCTGGGCTCCAACC ************* ********************************************** HS_haplotype1 CAGGCGGATAACAGCACCCTAGACCCATCTGAGGGAAGAATCTACTTAACAATATTTGAC HS_assemblymutate CAGGCGAATAACAGCACCCTAGACCCATCTGAGGGAAGAATCTACTTAACAATATTTGAC HS_haplotype2 CAGGCGAATAACAGCACCCTAGACCCATCTGAGGGAAGAATCTACTTAACAATATTTGAG ****** **************************************************** HS_haplotype1 ATACTCTGAGCCCAGTCTGGGCAAGAAATGCATAAAAAAGCAATCACTTCTCCTGAGTAT HS_assemblymutate ATACTCTGAGCCCAGTCTGGGCAAGAAATGCATAAAAAAGCAATCACTTCTCCTGAGGAT HS_haplotype2 ATACTCTGAGCCCAGTCTGGGCAAGAAATGCATAAAAAAGCAATCACTTCTCCTGAGGAT ********************************************************* ** HS_haplotype1 AAGAACTTATGACAAATCTCACTCAGGGTTCAAAGAAGGTAGCTTATCTGCAGCGTACAT HS_assemblymutate AAGAACTTATGACAAATCTCACTCAGGGTTCAAAGAAGGTAGCTTATCTGCAGCGTACAT HS_haplotype2 AAGAACTTATGACAAATCTCACTCAGGGTTCAAAGAAGGTCGCTTATCTGCAGCGTACAG **************************************** ****************** HS_haplotype1 TCATTTGTGATTGCTGGGAGGCCAAAGTCTCTTGAGCAGGGATTTTTCTCCCACCAAAGC HS_assemblymutate TCATTTGTGATTGCTGGGAGGCCAAAGTCTCTTGAGCAGGGATTTTTCTCCCACCAAAGC HS_haplotype2 TCATTTGTGATTGCTGGGAGGCCAAAGTCTCTTGAGCAGGGATTTTTCTCCCACCAAAGC ************************************************************ HS_haplotype1 CACCTGCTGAGAATAAAGTCGTGCCATTCCATCAAACTTTTCACTTGTGCGACCCATTTT HS_assemblymutate CACCTGCTGAGAATAAAGTCGTGCCATTCCATCAAACTTTTCACTTGTGCGACCCATTTT HS_haplotype2 CACCTGCTGAGAATAAAGCCGTGCCATTCCATCAAACTTTTCACTTGTTCGACCCATTTT ****************** ***************************** *********** HS_haplotype1 CCCTCCCCTGGGAGGATAAAAAAATTAAAATACCAAGTAGCCAAGTTTTTAACATTGTAA HS_assemblymutate CCCTCCCCTGGGAGGATAAAAAAATTAAAATACCAAGTAGCCAAGTTTTTAACATTGTAA HS_haplotype2 CCCTCCCCTGGGAGGATAAAAAAATTAAAATACCAAGTAGCCAAGTTTTTAACATTGTAA ************************************************************ HS_haplotype1 TCCATTCCGTCTTTGTGTCCTGCATGATGAACTATGAGAACTGTATTTAAGTGTAGTAGG HS_assemblymutate TCCATTCCGTCTTTGTGTCCTGCATGATGAACTATGAGAACTGTATTTAAGTGTAGTAGG HS_haplotype2 TCCATTCCGTCTTTGTGTCCTGCATGATGAACTATGAGAACTGTATTTAAGTGTAGTAGG ************************************************************ HS_haplotype1 ACATTTCTTCTACCTGTGATACTTTCCTGCATCCTCCCGATCACCTATCAACTGGAGCCA HS_assemblymutate ACATTTCTTCTACCTGTGATACTTTCCTGCATCCTCCCGATCACCTATCAACTGGAGCCA HS_haplotype2 ACATTTCTTCTACCTGTTATACTTTCCTACATCCTCCCGATCACCTATCAACTGGCGCCA ***************** ********** ************************** **** HS_haplotype1 GTGTCCCATGCCTCCGGATTCTCAAACAAACTGGAGCTCTGACACGCCAGTGATGGATTT HS_assemblymutate GTGTCCCATGCCTCCGGATTCTCAAACAAACTGGAGCTCTGACACGCCAGTGATGGATTT HS_haplotype2 GTGTCCCATGCCTCCGGATTCTCAAACAAACTGGAGCTCTGACACGGCAGTGATGGATTT ********************************************** ************* HS_haplotype1 GAGCGCAGTGTTGCCACATACCTCTAGAAAAAGAGGTTTATTCCCCTGGATCTCCCGACC HS_assemblymutate GAGCGCAGTGTTGCCACATACCTCTAGAAAAAGAGGTTTATTCCCCTGGATCTCCCGACC HS_haplotype2 GAGCGCAGTGTTGCCACATACCTCTAGAAAAAGAGGTTTATTCACCTGGATCTCCCGACC ******************************************* **************** HS_haplotype1 TGGTTTCTTGATTATCTAAATACTAGGTGCCTGTATATAATCATCTGAAAGGGGTATCAA HS_assemblymutate TGGTTTCTTGATTATCTAAATACTAGGTGCCTGTATATAATCATCTGAAAGGGGTATCAA HS_haplotype2 TGGTTTCTTGATTATCTAAATACTAGGTGCCTGTATATAATCATCTGAAAGGGGTATTAA ********************************************************* ** HS_haplotype1 TTATCATTTTTGACAAGTTCTCTTTAGAGGACAACATGATACAGGCAAAAAAAGTGTAAA HS_assemblymutate TTATCATTTTTGACAAGTTCTCTTTAGAGGACAACATGATACAGGCAAAAAAAGTGTAAA HS_haplotype2 TTATCATTTTTGACAAGTGCTCTGTAGAGGACAAGATGATACATGCAAAAAAAGTGTAAA ****************** **** ********** ******** **************** HS_haplotype1 CAAAACAAGATCATTATTTATTTACAGTGAGCCCTGTGGGTGACAAAAACATGCTCCCTC HS_assemblymutate CAAAACAAGATCATTATTTATTTACAGTGAGCCCTGTGGGTGACAAAAACATGCTCCCTC HS_haplotype2 CAAAACAAGATCATTATTTATTTACAGTGAGCCCTGTGGGTGACAAAAACATGCTCCCTC ************************************************************ HS_haplotype1 AGCCTTTGAAACGAGTACCCTAATGAAATGTTGCATGTTTCAGAAGCTGAAGCCCTCCCC HS_assemblymutate AGCCTTTGAAACGAGTACCCTAATGAAATGTTGCATGTTTCAGAAGCTGAAGCCCTCCCA HS_haplotype2 AGCCTTTGAAACGAGTACCCTAATGAAATGTTGCATGTTTCAGAAGCTGAAGCCCTCCCA *********************************************************** HS_haplotype1 TTTAGAAATTAGATGAGCTGGTCTTCTCCTTGGTGTGCAGTGAGGTTTGTGAGGAAGTAA HS_assemblymutate TTTAGAAATTAGATGAGATGGTCTTCTCCTTGGTGTGCAGTGAGGTTTGTGAGGAAGTAA HS_haplotype2 TTTAGAAATTAGATGAGATGGTCTTCTCCTTGGTGTGCAGTGAGGTTTGTGAGGAAGTAA ***************** ****************************************** HS_haplotype1 CCACGCAGGGCTCTGACCTTTTACAAGACATGAAGGGTGGTGCCCCTGATGGGTCTTTCC HS_assemblymutate CCACGCAGGGCTCTGACCTTTTACAAGACATGAAGGGAGGTGCCCCGGATGGGTCTTTCC HS_haplotype2 CCACGCAGGGCTCTGACCTTTTACAAGACATGAAGGGAGGTGCCCCGGATGGGTCTTTCC ************************************* ******** ************* HS_haplotype1 AGATCAAGAGACCATCCAGGAGTTTTTTTAGCAGCAAGGCGATACATCACATAATATCAG HS_assemblymutate AGATCAAGAGACCATCCAGGAGTTTTTTTAGCAGCAAGGCGATACATCACATAATATCAG HS_haplotype2 AGATCAAGAGACCATCCAGGAGTTTTTTTAGCAGCAAGGCGATACATCACATAATATCAG ************************************************************ HS_haplotype1 TGCAATTCTCCTGCCATCATAGTAAAGAATCAAAAAGAGTGCCCCTTGAAAGAAGCACGC HS_assemblymutate TGCAATTCTCCTCCCATCATAGTAAAGAATCAAAAAGAGTGCCCCTTGAAAGAAGCACGC HS_haplotype2 TGCAATTCTCCTCCCATCATAGTAAAGAATCAAAAAAAGTGCCCCTTGAAAGAAGCACGC ************ *********************** *********************** HS_haplotype1 CCGTTCACCGTAAGGGGAGCCAACTTACATACTGTCAAGTTTGGCAGGATAGTAAGGACA HS_assemblymutate CCGTTCACCGTAAGGGGAGCCAACTTACATACTGTCAAGTTTGGCAGGATAGTAAGGACA HS_haplotype2 CCGTTCACCGTAAGGGGAGCCAACTTAGATACTGTCAAGTTTGGCAGGATAGTAAGGTCA *************************** ***************************** ** HS_haplotype1 AAGACTGAGTGCTGAGCTTAGGTTAGTTTCTGCTTATCTATAAGAGTGATGAGGTGGGGG HS_assemblymutate AAGACTGAGTGCTGAGCTTAGGTTAGTTTCTGCTTATCTATAAGAGTGATGAGGTGGGGG HS_haplotype2 AAGACTGAGTGCTGAGCTTAGGTTAGTTTCTGCTTATCTATAAGAGTGATGAGGTGGGAG ********************************************************** * HS_haplotype1 AAGTGCCACCGAAGGGGATGCCCAATAACAATCTCCCCCCTCGGGTGGTGAATTTTGAGA HS_assemblymutate AAGTGCCACCGAAGGGGATGCCCAATAACAATCTCCCCCCTCGGGTGGTGAATTTTGAGA HS_haplotype2 AAGTGCCACCGAAGGGGATGCCCAATAACAATCTCCCCCCTCGGGTGGTGAATTTTGAGA ************************************************************ HS_haplotype1 GTTTGCTTACTCGGGGCGGGTTACATGCCCTGAGGGGTTGGCAGCCCCCTTAGTTAAATG HS_assemblymutate GTTTGCTTACTCGGGGCGGGTTACATGCCCTGAGGGGTTGGCAGCCCCCTTAGTTAAATG HS_haplotype2 GTTTGCTTACTCGGGGCGGGTTACATGCCCTGAGGGGTTGGCAGCCCCCTTAGTTAAATG ************************************************************ HS_haplotype1 GAGAAAGGTTTTATAGCCTGTAGCAAAGTCCCTCATCTCCTGGAATTGGCAGATTTACCC HS_assemblymutate GAGAAAGGTTTTATAGCCTGTAGCAAAGTCCCTCATCTCCTGGAATTGGCAGATTTACCC HS_haplotype2 GAGAAAGGTTTTATAGCCTGTAGCAAAGTCCCTCATCTCCTGGAATTGGCAGATTTACCC ************************************************************ HS_haplotype1 AGAACTTCCATTAGAAATTAATGCATGCCCTAGAATAGGTTTTGACTGATTTTAAACTGT HS_assemblymutate AGAACTTCCATTAGAAATTAATGCATGCCCTAGAATAGGTTTTGACTGATTTTAAACTGT HS_haplotype2 AGAACTTCCATTAGAAATTAATGCATGCCCTAGAATAGGTTTTGACTGATTTTAAACTGT ************************************************************ HS_haplotype1 TTTCCTTTAAAAAGGGAGACCTCCTACTAAATAATGAAAGAAAAACACTGCAGTGATGAG HS_assemblymutate TTTCCTTTAAAAAGGGAGACCTCCTACTAAATAATGAAAGAAAAACACTGCAGTGATGAG HS_haplotype2 TTTCCTTTAAAAAGGGAGACCTCCTACTAAATAATGAAAGAAAAACACTGCAGTGATGAG ************************************************************ HS_haplotype1 GGCTGGTTTAAAAGTTTGGCAGAGTGAGTGACCGTCAGAGGGAAACCTCCTGTAGGCTGA HS_assemblymutate GGCTGGTTTAAATGTTTGGCAGAGTGAGTGACCGTCAGAGGGAAACCTCCTGTAGGCTGA HS_haplotype2 GGCTGGTTTAAATGTTTGGCAGAGTGAGTGACCGTCAGAGGGAAACCTCCTGTAGGCTGA ************ *********************************************** HS_haplotype1 GTTACTGAAGCCAAACCAGGTCAGCGCTACTATTTAATATAATGGCATGGGGACCCTTTT HS_assemblymutate GTTACTGAAGCCAAACCAGGTCAGCGCTACTATTTAATATAATGGCATGGGGACCCTTTT HS_haplotype2 GTTACTGAAGCCAAACCAGGTCAGCGCTACTTTTTAATATAATGGCATGGGGACCCTTTT ******************************* **************************** HS_haplotype1 GCTGTTCAATCTACTGGCCTTCAAGGGGTTTTCAATTAAGATTAAAATTTCACTGGAAAC HS_assemblymutate GCTGTTCAATCTACTGGCCTTCAAGGGGTTTTCAATTAAGATTAAAATTTCACTGGAAAC HS_haplotype2 GCTGTTCAATCTACTGGCCTTCAAGGGGTTTTCAATTAAGATTAAAATTTCACTGGAAAG *********************************************************** HS_haplotype1 AAAGTAGACTCCAGCTGGTCAGGGACTGCATCTCTAAGTAATCAATCCTGAATATCACCT HS_assemblymutate AAAGTAGACTCCAGCTGGTCAGGGACTGCATCTCTAAGTAATCAATCCTGAATATCACCT HS_haplotype2 AAAGTAGACTCCAGCTGGTCAGGGACTGCATCTCTAAGTAATCAATCCTGAATATCACCT ************************************************************ HS_haplotype1 GGGGGTTCGAAATCAGCCAGACATCCTAAGATTACAGACCGGGAGGCAGCTTATTTCTGT HS_assemblymutate GGGGGTTCGAAATCAGTCAGACATCCTAAGATTACGGACCGGGAGGCAGCTTATTTCTGT HS_haplotype2 GGGGGTTCGAAATCAGTCAGACATCCTAAGATTACGGACCGGGAGGCAGCTTATTTCTGT **************** ****************** ************************ HS_haplotype1 ACAAGATCTTGGCTAACTAGAAGGGGAAGACCTCGCGTGAGATAAGCCTGGGCTCAAAGG HS_assemblymutate ACAAGATCTTGGCTAACTAGAAGGGGAAGACCTCGCTTGAGATAAGCCTGGGCTCAAAGG HS_haplotype2 ACAAGATCTTGGCTAACTAGAAGGGGAAGACCTCGCTTGAGATAAGCCTGGGCTCAAAGG ************************************ *********************** HS_haplotype1 AAGTGCAGTTTGAATAAGGGATTTTATTTTTTCATAAAAAGAAAACAGCCAATTTTGTTA HS_assemblymutate AAGTGCAGTTTGAATAAGGGATTTTATTTTTTCATAAAAAGAAAACAGCCAATTTTGTTA HS_haplotype2 AAGGGCAGTTTGAATAAGGGATTTTATTTTTTCATAAAATGAAAACAGCCAATTTTGTTA *** *********************************** ******************** HS_haplotype1 ATGAAGGGGAGGCACGAGGGATACCAATGAGTTTCTTCGGCGCGGACATTCTACTTGTGT HS_assemblymutate ATGAAGGGGAGGCACGAGGGATACCAATGAGTTTCTTCGGCGCGGACATTCTACTTGTGT HS_haplotype2 ATGAAGGGGAGGGCCGAGGGAAACCACTGAGTTGCTTCGGCGCGGACATTCTACTCTTGT ************ ******* **** ****** ********************* *** HS_haplotype1 ATTTACGGGTGTAAAACCTGACCAGCCCACCATCTGTGCTGAGCCGCCAAGGCTCGGTGG HS_assemblymutate ATTTACGGGTGTAAAACCTGACCAGCCCACCATCTGTGCTGAGCCGCCAAGGCTCGGTGG HS_haplotype2 ATTTACGGGTGTAAAACCTGACCAGCCCACCATCTGTGCTGAGCCGCCCAGGCTCGGTGG ************************************************ *********** HS_haplotype1 TTCCACCCTGGGAGCTAAAATTAAGGATGGTGGATCCCATTGGGTAATTCCTGCCTGAGT HS_assemblymutate TTCCACCCTGGGAGCTAAAATTAAGGATGGTGGATCCCATTGGGTAATTCCTGCCTGAGT HS_haplotype2 TTCCACCCTGGGAGCTAAAATTAAGGATGGTGGATCACATTGGGTAATTCCTGCCTGAGT ************************************ *********************** HS_haplotype1 TTTAAAATAAGGAAACCAATTCCACCCAGAGTAGCATATAGTAGCCCACATAAGTGCACC HS_assemblymutate TTTAAAATAAGGAAACCAATTCCACCCAGAGTAGCATATAGTAGCCCACATAAGTGCACC HS_haplotype2 TTTAAAATACGGAAACCAATTCCACCCAGAGTAGCATATAGTAGCCCACATAAGTGCACC ********* ************************************************** HS_haplotype1 AGAAAAGCGAGGAAGCAAATGGAATTGAGCCTTCCAAACTCCTTTACCAGTCAAAACAAA HS_assemblymutate AGAAAAGCGAGGAAGCAAATGGAATTGAGCCTTCCAAACTCCTTTACCAGTCAAAACAAA HS_haplotype2 AGAAAAGCGAGGAAGCAAATGGAATTGAGCCTTCCAAACTCCTTTACCAGTCAAAACAAA ************************************************************ HS_haplotype1 CAAAAAGAGGCAGCAGGCCCCTGCCTTCCTCCTATATAAAACAGATTCTGAGAGAAAGCA HS_assemblymutate CAAAAAGAGGCAGCAGGCCCCTGCCTTCCTCCTAGATAAAACAGATTCTGAGAGAAAGCA HS_haplotype2 CAAAAAGAGGCAGCAGGCCCCTGCCTTCCTCCTAGATAAAACAGATTCTGAGAGAAAGCA ********************************** ************************* HS_haplotype1 AATGATTACAGCATTTTATAAGGACAAGGCTGGCAATTACATATGTATTTCTGGGTGGGA HS_assemblymutate AATGATTACAGCATTTTAAAAGGACAAGGCTGGCAATCACATATGTATTTCTGGGTGGGA HS_haplotype2 AATGATTACAGCATTTTAAAAGGACAAGGCTGGCAATCACATATGTATTTCTGGGTGGCA ****************** ****************** ******************** * HS_haplotype1 TAGAGACAACACACATCTCTTTTTATTTTCTTTGGACAGCAGTGGAAAATTAGTGAGCCA HS_assemblymutate TAGAGACAACACACATCTCTTTTTATTTTCTTTGGACAGCAGTGGAAAATTAGTGAGCCA HS_haplotype2 TAGAGACAACACACATCTCTTTTTATTTTCTTTGGACAGCAGTGGCAAATTAGTGAGCCA ********************************************* ************** HS_haplotype1 TGCCTTTTATTTAGAGCACAAACTTGTGTCCCTGGTCCCTTCACTGTGCAACATGGATTA HS_assemblymutate TGCCTTTTATTTAGAGCACAAACTTGTGTCCCTGGTCCCTTCACTGTGCAACATGGATTA HS_haplotype2 TGCCTTTTATTTAGAGCACACACTTGTGTCCCTGGTCCCTTCACTGTGCAACATGGATTA ******************** *************************************** HS_haplotype1 GATCAGCCCAGGAAACAATCGAGAAATATATATCTACTGTCCCACTCTTCACACCGTTTC HS_assemblymutate GATCAGCCCAGGAAACAATCGAGAAATATATATCTACTGTCCCACTCTTCACACCGTTTC HS_haplotype2 GATCAGCCCAGGAAACAATCGAGAAATATATATCTACTGTCCCACTCTTCACACCGTTTC ************************************************************ HS_haplotype1 TACAAAGTTCAGCTACTAAATTCTTCCCCTTCATAGTTATTTGAGATGTTTAAAAACACT HS_assemblymutate TACAAAGTTCAGCTACTAAATTCTTCCCCTTCATATTTATTTGAGATGATTAAAAACACT HS_haplotype2 TACAAAGTTCAGCTACTAAATTCTTCCCCTTCATATTTATTTGAGATGATTAAAAACACT *********************************** ************ *********** HS_haplotype1 CCTGTATATATTAATGCTGTTTATTTTAGCTGGGCGAAGTCACAATTATTTTGTATGTTA HS_assemblymutate CCTGTATATATTAATGCTGTTTATTTTAGCTGGGCGAAGTCACAATTATTTTGTATGTTA HS_haplotype2 CCTGTATATATTAATGCTGTTTATTTTAGCTGGGCGAACTCACAATTATTTTGTATGTTA ************************************** ********************* HS_haplotype1 CTCGGATCTTCATTTCAATAAAATACAATTTGAGATGGAGAAAGCAAGTCATCCAGCCCC HS_assemblymutate CTCGGATCTTCATTTCAATAAAATACAATTTGAGATGGAGAAAGCAAGTCATCCAGCCCC HS_haplotype2 CTCGGATCTTCATTTCAATAAAATACAATTTGAGATGGAGAAAGCAAGTCATCCAGCCCC ************************************************************ HS_haplotype1 CGAGTTTTCTACCTAATATTATCTGAACACAAGTTGCAGAGGGAAATTGGCTCAGAAGGC HS_assemblymutate CGAGTTTTCTACCTAATATTATCTGAACACAAGTTGCAGAGGGAAATTGGCTCAGAAGGC HS_haplotype2 CGAGTTTTCTGCCTAATATTATCTGAACACAAGTTGCAGCGGGAAATTGGCTCAGAAGTC ********** **************************** ****************** * HS_haplotype1 CCATGTGACCCCGGCCTGGTTCTTCACCCTACTGGGCCAAGTCAAAATTTTTTAGCTATA HS_assemblymutate CCATGTGACCCCGGCCTGGTTCATCACCCTACTGGGCCAAGTCAAAATTTTTTAGCTATG HS_haplotype2 CCATGTGACCCCGGCCAGGTTCATCACCCTACTGGGCCAAGTCAAAATTTTTTAGCTATG **************** ***** ************************************ HS_haplotype1 GTCTTATTTTAGCCATTCTCAAATAGAGAATAAAATTACTGGGTTGTTTAAAACTTCTGA HS_assemblymutate GTCTTATTTTAGCCATTCTCAAATAGAGAATAAAATTACTGGGTTGTTTAAAACTTCTGA HS_haplotype2 GTCTTATTTTAGCCATTCTCAAATAGAGAATAAAATTACTGGGTTGTTTAAAACTTCTGA ************************************************************ HS_haplotype1 AACATACATGCATGGAAGCCCTTTCTAATGGGAGGTGTTAGCTGAGGGGTCCTCAACCCG HS_assemblymutate AACATACATGCATGGAAGCCCTTTCTAATGGGAGGTGTTAGCTGAGGGGTCCTCAACCCG HS_haplotype2 AACATACATGCATGGAAGCCCTTTCCAATGGGAGGTGTTAGCTGAGGGGTCCTCAACGCG ************************* ******************************* ** HS_haplotype1 GGTCGACAAATGTCATCTCCGTCTCGCTGAGGCTGACTCCAGAGGCTGCAATTTGGGTTT HS_assemblymutate GGTCGACAAATGTCATCTCCGTCTCGCTGAGGCTGACTCCAGAGGCTGCAATTTGGGTTT HS_haplotype2 GGTCGACAAATGTCATCTCCGTCTCGCTGAGGCTGACTCCAGAGGCTGCAATTTGGGTTT ************************************************************ HS_haplotype1 CCTTATCCCATCAGGCAAAACCTCCCAGCCTGTATAAGAGAAAAATATTTCACAAATAAA HS_assemblymutate CCTTATCCCATCAGGCAAAACCTCCCAGCCTGTATAAGAGAAAAATATTTCACAAATAAA HS_haplotype2 CCTTATCCCATCAGGCAAAACCTCCCAGCCTGTATAAGAGAAAAATATTTCACAAATAAA ************************************************************ HS_haplotype1 AGCCCAAAGGGGACGCCAGAATCCCACAAGATTCAACCGAGGTATTTGAGCCAGTTGAGG HS_assemblymutate AGCCCAAAGGGGACGCCAGAATCCCACAAGATTCAACCAAGGTATTTGAGCCAGTTGAGG HS_haplotype2 AGCCCAAAGGGGACGCCAGAATCCCACAAGATTCAACCAAGGTATTTGAGCCAGTTGAGG ************************************** ********************* HS_haplotype1 CTCACCAAAACAATGAAGTCTGCGAGCTATTGTGACTTGGCATGAACTTTTATTATAATC HS_assemblymutate CTCACCAAAACAATGAAGTCTGCGAGCTATTGTGACTTGGCATGAACTTTTATTTTAATC HS_haplotype2 CTCACCAAAACAATGAAGTCTGCGAGCTATTGTGACTTGGCATGAACTTTTATTTTAATC ****************************************************** ***** HS_haplotype1 AATGACCTATGATGTGGTAGACACTAGGGTTAGGGAGACCAAGGGGAAGATTCCAGTCAC HS_assemblymutate AATGACCTATGATGTGGTAGACACTAGGGTTAGGGAGACCAAGGGGAAGATTCCAGTCAC HS_haplotype2 AATGACCTATGATGTGGTAGACACTAGGGTTAGGGAGACCAAGGGGAAGATTCCAGTCAC ************************************************************ HS_haplotype1 GCCAGAATGGAATTTTGATTGTTGATCCATCTCAGATAAAGACTGGTGGGGATGCTGGGA HS_assemblymutate GCTAGAATGGAATTTTGATTGTTGATCCATCTCAGATAAAGACTGGTGGGGATGCTGGGA HS_haplotype2 GCTAGAATGGAATTTTGATTGTTGATCCATCTCAGATAAAGACTGGTGGGGATGCTGGGA ** ********************************************************* HS_haplotype1 TTAGACTTCAAGGCTGGCCACTGACTCATGCACTCCCGGGCCTATAACTTTGTATATATA HS_assemblymutate TTAGACTTCAAGGCTGGCCACTGACTCATGCACTCCCGGGCCTATAACTTTGTACATATA HS_haplotype2 TTACACTTCAAGGCTGGCCACTGACTCATGCACTCCCGGGCCTATAACTTTGTACATATA *** ************************************************** ***** HS_haplotype1 GTAATACACTAACTATAGGAAGGAGCCGGAGCCAATGCTTCTTTAACGGAATGCAGCCTA HS_assemblymutate GTAATACACTAACTATCGGAAGGAGCCGGAGCCAATGCTTCTTTAACGGAATGCAGCCTA HS_haplotype2 GTAATACACTAACTATCGGAAGGAGCCGGAGCCACTGCTTCTTTAACGGAATGCAGCCTA **************** ***************** ************************* HS_haplotype1 GGAACTTCAATGTGAGGCGTGATTCCTGGGGTGTGGGATGGCAGCAGTGGTCTCCTGATT HS_assemblymutate GGAACTTCAATGTGAGGCGTGATTCCTGGGGTGTGGGATGGCAGCAGTGGTCTCCTGATT HS_haplotype2 GGAACTTCAATGTGAGGCGTGATTCCTGGGGTGTGGGATGGCAGCAGTGGTCTCCTGATT ************************************************************ HS_haplotype1 ACAGAGGACCTCTCTGAGCCACTGCCAGAAGGAAATATAGTGGGCAGCACGCCACATTAA HS_assemblymutate ACAGAGGACCTCTCTGAGCCACTGCCAGAAGGAAATATAGTGGGCAGCACGCCACATTAA HS_haplotype2 ACAGAGGACCTCTCTGAGCCACTGCCAGAAGGAAATATAGTGGGCAGCACGCCACATTAA ************************************************************ HS_haplotype1 ATACACCATCCTCTTGGAGGTTATTTATTTCCTGGCTTGCATGAACTGGAGACTCGGCTG HS_assemblymutate ATACACCATCCTCTTGGAGGTTATTTATTTCCTGGCTTGCATGAACTGGAGACTCGGCTG HS_haplotype2 ATACACCATCCTCTTGGAGGTTATTTATTTCCTGGCTTGCATGAACTGGAGACTCGGCTG ************************************************************ HS_haplotype1 GCTCCACAGAATTTGATGTAACTATAATTAATTACCCAAACGCTTTGTAAATGAGCCGGC HS_assemblymutate GCTCAACAGAATTTGATGTAACTATAATTAATTACCCAAACGCTTTGTAAATGAGCCGGC HS_haplotype2 GCTCAACAGAATTTGATGTAACTATAATTAATTACCCAAACGCTTTGTAAATGAGCCGGC **** ******************************************************* HS_haplotype1 CAAGATGATGTCCTGCTAGACAGGAGGCTGTTGTGGCTCACAATGAGAAGGGCCAAGATG HS_assemblymutate CAAGATGATGTCCTGCTAGACAGGAGGCTGTTGTGGCTCACAATGAGAAGGGCCAAGATG HS_haplotype2 CAAGATGATGTCCTGCTAGACAGGAGGCTGTTGTGGCTCACAATGAGAAGGGCCAAGATG ************************************************************ HS_haplotype1 GAACATGTGCAAAGAAGCGCAGCAGGGTGATCCTTCTTCCCTGCGACCCTGCCGGCCCTC HS_assemblymutate GAACATGTGCAAAGAAGCGGAGCAGGGTGATCCTTCTTCCCTGCGTCCCTGCCGGCCCTC HS_haplotype2 GAACATGTGCAAAGAAGCGGAGCAGGGTGATCCTTCTTCCCTGCGTCCCTGCCGGCCCTC ******************* ************************* ************** HS_haplotype1 CATCTTTTTGTATTTATATGGAGGGCTAGAAAACATGGGACTGTTCAAAACTCAGCAAAC HS_assemblymutate CATCTTTTTGTATTTATATGGAGGGCTAGAAAACATGGGACTGTTCAAAACTCAGCAAAC HS_haplotype2 CATCTTTTTGTATTTATATGGAGGGCTAGAAAACATGGGACTGTTCAAAACTCAGCAAAC ************************************************************ HS_haplotype1 AGACCATGTATTTTTAAGTGGAACTCCTTAATTTCAATCTAACAGGTTGCAGCGACCTCC HS_assemblymutate AGACCATGAATTTTTAAGTGGAACTCCTTAATTTCAATCTAACAGGTTGCAGCGACCTCC HS_haplotype2 AGACCATGAATTTTTAAGTGGAACTCCTTAATTTCAATCTAACAGGTTGCAGCGACCTCC ******** *************************************************** HS_haplotype1 CCCAGAATTGTTTTTTGGAGGTCTCTGAGTGTTTGATGTTTCCACCAAAGATTCTCAGAA HS_assemblymutate CCCAGAATTGTTTTTTGGAGGTCTCTGAGTGTTTGATGTTTCCACCAAAGATTCTCAGAA HS_haplotype2 CCCAGAATTGTTTTTTGGAGGTCTCTGAGTGTTTGATGTTTCCACCAAAGATTCTCAGAA ************************************************************ HS_haplotype1 CCCTGGCCCTTCTCAAGGGACAGTCTTTCTCTGGGCAACCTAGTAGTTAAAAAGGAACTG HS_assemblymutate CCCTGGCCCTTCTCAAGGGACAGTCTTTCTCTGGGCAACCTAGTAGTTAAAAAGGAACTG HS_haplotype2 CCCTGGCCCTTCTCAAGGGACAGTTTTTGTCTGGGCAACCTAGTAGTTAAAAAGGAACTG ************************ *** ******************************* HS_haplotype1 GGCTGGCTCCTCATCTTGTAGAAAATGTTCATCCACCAAATGGGATTATTGATACACAAG HS_assemblymutate GGCTGGCTCCTCATCTTGTAGAAAATGTTCATCCACCAAATGGGATTATTGATACACAAG HS_haplotype2 GGCTGGCTCCTCATCTTGTAGAAATTGTTCATCCACCAAATGGGATTATTGATACACAAG ************************ *********************************** HS_haplotype1 AGCAATCAAGGCAGGAGAAAAAATGATTACTCAGCCATGAATTCCAAAGAGAAGGATGCT HS_assemblymutate AGCAATCAAGGCAGGAGACAAAATGATTACTCAGCCATGAATTCCAAAGAGAAGGATGCT HS_haplotype2 AGCAATCAAGGCAGGAGACAAAATGATTACTCAGCCATGAATTCCAAAGAGAAGGATGCT ****************** ***************************************** HS_haplotype1 AAGTCTTTTCCACCGACTGTGAAAAAGATATTGAGCCCAGAACAAAATAGCAATATCGGA HS_assemblymutate AAGTCTTTTCCACCGACTGTGAAAAAGATATTGAGCCCAGAACAAAATAGCAATATCGGA HS_haplotype2 AAGTCTTTTCCACCGACTGTGAAAAAGATATTGAGCCCAGAACAAAATAGCAATATCGGA ************************************************************ HS_haplotype1 GGCTCGGAAGAATCTGGGGACAATGGAGCATATGAGACCTTATTTCTAGACGGGGCGTGC HS_assemblymutate GGCTCGGAAGAATCTGGGGACAATGGAGCATATGAGACCTTATTTCTAGACGGGGCGTGC HS_haplotype2 GGCTCGGAAGAATCTGGGGACAATGGAGCATATGAGACCTTATTTCTAGTCGGGGCGTGC ************************************************* ********** HS_haplotype1 TGAGGCACAATTTCTACTAGGACTGATCCTTAAAAATAAATTTCCAATCATCCTTCTACG HS_assemblymutate TGAGGCACAATTTCTACTAGGACTGATCCTTAAAAATAAATTTCCAATCATCCTTCTACG HS_haplotype2 TGAGGCACAATTTCTAATAGGACTGATCCTTAAAAATAAATTTCCAATCATCCTTCTACG **************** ******************************************* HS_haplotype1 GCGCGTTGCACAAGATGGCTCTTGGGCTCAGGCGGCTTCCCTGCAGTATTTCCCACAGTG HS_assemblymutate GCGCGTTGCACAAGATGGCTCTTGGGCTCAGGCGGCTTCCCTGCAGTATTTCCCACAGTG HS_haplotype2 GCGCGTTGCACAAGATGGCTCTTGGGCTCAGGCGGCTTCCCTGCAGTATTTCCCACAGTG ************************************************************ HS_haplotype1 ACCAGTATAGAGACCTGAGGCCCGGCCTTTTTAGTATCAGCCCCTGGCTATAGAATGTAT HS_assemblymutate ACCAGTATAGAGACCTGAGGCCCGGCCTTTTTAGTATCAGCCCCTGGCTATAGAATGTAT HS_haplotype2 ACCAGTATAGAGACCTGAGGCCCGGCCTTTTTAGCATCAGCCCCTGGCTATAGAATGTCT ********************************** *********************** * HS_haplotype1 TGGCTTCCTATGATTACCTTCCTGGGCGGGAGGGTGGATCTTTAAATGAAACAACCAAAG HS_assemblymutate TGGCTTCCTATGATTACCTTCCTGGGCGGGAGGGTGGATCTTTAAATGAAACAACCAAAG HS_haplotype2 TGGCTTCCAATGATTACCTGCCTGGGCGGGAGGGTGGATCTTTAAATGAAACAACCAAAG ******** ********** **************************************** HS_haplotype1 AGTTGTAAAAACTCCTGAAATTGTAAGAAGGTGGGGACACTCTTCCGCTCTCTTTTGATA HS_assemblymutate AGTTGTAAAAACTCCTGAAATTGTAAGAAGGTGGGGACACTCTTCCGCTCTCTTTTGATA HS_haplotype2 AGTTGTAAAAACTCCGGAAATTGTAAGAAGGTGGGGACACTCTTCCGCTCTCTTTTGATA *************** ******************************************** HS_haplotype1 AGCTAGGACTTAACAGTAGTGGTCATCACCTCCGGGATGGGATGTTAAATGCTTGGCTCA HS_assemblymutate AGCTAGGGCTTAACAGTAGTGGTCATCACCTCCCGGATGGGATGTTAAATGCTTGGCTCA HS_haplotype2 AGCTAGGGCTTAACAGTAGTGGTCATCACCTCCCGGATGGGATGTTAAATGCTTGGCTCA ******* ************************* ************************** HS_haplotype1 CCTCTTCATGGATCACTGATCACACAGTGAGTAAATTGTCATGATGGGATTACAGGCGGC HS_assemblymutate GCTCTTCATGGATCACTGATCACACAGTGAGTAAATTGTCATGATGGGATTATAGGCGGC HS_haplotype2 GCTCTTCATGGATCACTGATCACACAGTGAGTAAATTGTCATGATGGGATTATAGGCGGC *************************************************** ******* HS_haplotype1 CAAAAAGACTCTCATGCCAAAATCCCAGGGGTGAGACTGGTCACACAATGGAGTGGGCAC HS_assemblymutate CAAAAAGACTCTCATGCCAAAATCCCAGGGGTGAGACTGGTCACACAATGGAGTGGGCAC HS_haplotype2 CAAAAAGACTCTCATGCCAAAATCCCAGGGGTGAGACTGGTCACACAATGGAGTGGGCAC ************************************************************ HS_haplotype1 GCCAAGACATTTATATTTTGAACAATCAAAAATCATTCTGCTCTCCAATAACTCTATAAC HS_assemblymutate GCCAAGACATTTATATTTTGAACAATCAAAAATCATTCTGCTCTCCAATAACTCTATAAC HS_haplotype2 GCCAAGACATTTATATTTTGAACAATCAAATATCATTCTGCTCTCCAATAACTCTATAAC ****************************** ***************************** HS_haplotype1 ATGGGAGGAACTCAACAAAAGATTTGGGTAGAAAGAGGCCCACTGATAATTTGACAGGGG HS_assemblymutate ATGGGAGGAACTCAACAAAAGATTTGGGTAGAAAGAGGCCCACTGATAATTTGACAGGGG HS_haplotype2 ATGGGAGGAACTCAACAAAAGATTTGGGTAGAAAGAGGCCCACTGATAATTTGACAGGGG ************************************************************ HS_haplotype1 CACAGATTCAGAACATAGAGTACTGTGCGCGAGACAGAGTTGGCCAAGTAGGTGCCAGGC HS_assemblymutate CACAGATTCAGAACATAGAGTACTGTGCGCGAGACAGAGTTGGCCAAGTAGGTGCCAGGC HS_haplotype2 CACAGATTCAGAACATAGAGTACTGTGCGCGAGACAGAGTTGCCCAAGTAGGTGCCAGGC ****************************************** ***************** HS_haplotype1 TGGAAAATAATGTACCTCTGGGGTATGACCTCTATAGTCCAGCATTAGAGAGAGGCTGTA HS_assemblymutate TGGAAAATAATGTACCTCTGGGGTATGACCTCAATAGTCCAGCATTAGAGAGAGGCTGTA HS_haplotype2 TGGAAAATAATGTACCTCTGGGGTATGACCTCAATAGTCCAGCATTAGAGAGAGGCTGTA ******************************** *************************** HS_haplotype1 GCGGCGGGGATGTCAGCCAAGTTAAGTGGGATTTACCCACCTTTTTCTTGTAAATAGCAT HS_assemblymutate GCGGCGGGGATGTCAGCCAAGTTAAGTGGGATTTACCCACCTTTTTCTTGTAAATAGCAT HS_haplotype2 GCGGCGGGGATGTCAGCCAAGTTAAGTGGGATTTACCCACCTTTTTCTTGTAAATAGCAT ************************************************************ HS_haplotype1 CTTGGTTACGTTTCATCCCTAGAGTCATTTTTATCAGTCAGTAGAGGCCAAAGTACGATG HS_assemblymutate CTTGGTTACGTTTCATCCCTAGAGTCATTTTTATCAGTCAGTAGAGGCCAAAGTACGATG HS_haplotype2 CGTGGTTACGTTTCATCCCTAGACTCATTTTTATCAGTCAGTAGAGGCCAAAGTATGATG * ********************* ******************************* **** HS_haplotype1 TTGGATATACATTAACCTGATCATCATCTTAGCTCAGCTCTGATCCCACTGCACCACTGA HS_assemblymutate TTGGATATACATTAACCTGATCATCATCTTAGCTCAGCTCTGATCCCACTGCACCACTGA HS_haplotype2 TTGGATATACATTAACCTGATCATCATCTTGGCTCAGCTCTGATCCCACTGCACCACTGA ****************************** ***************************** HS_haplotype1 CTAAAAATACCACGAGAATATGAACGTAAGCCACATAATTCAATTATTCCAAGGTTCAAC HS_assemblymutate CTAAAAATACCACGAGAATATGAACGTAAGCCACATAATTCAATTATTCCAAGGTTCAAC HS_haplotype2 CTAAAAATACCACGAGAATATGAACGTAAGCCACATAATTCAATTATTCCAAGGTTCAAC ************************************************************ HS_haplotype1 CTGAAGCTTTCTCACCACTACCTTTGATTGTGTCGATGTCACTTGATGAGATTGAGGGCT HS_assemblymutate CTGAAGCTTTCTCACCACTACCTTTGATTGTGTCGATGTCACTTGATGAGATTGAGGGCT HS_haplotype2 CTGAAGCTGTCTCACCACTACCTTTGATTGTGTCGATGTCACATGATGAGATTGAGGGCT ******** ********************************* ***************** HS_haplotype1 AGAGTGGCATGCTTACCAAAGCAGGGAATGAAATTTTTTCTCCCCAGTGGCCTATGTTAC HS_assemblymutate AGAGTGGCATGCTTACCAAAGCAGGGAATGAAATTTTTTCTCCCCAGTGGCCTATGTTAC HS_haplotype2 AGAGTGGCATGCTTACCAAAGCAGGGAATGAAATTTTTTCTCCCCAGTGGCCTATGTTAC ************************************************************ HS_haplotype1 CTCTGTCCTTGTCTTCTCGCTTACCAAAGCCCGGCCTTATTTTTGGTAAAACATCCTCCA HS_assemblymutate CTCTGTCCTTGTCTTCTCGCTTACCAAAGCCCGGCCTTATTTTTGGTAAAACATCCTCCA HS_haplotype2 CTCTGTCCTTGTCTTCTCCCTTACCAAAGCCCGGCCTTATTTTCGGTAAAACATCCTCCA ****************** ************************ **************** HS_haplotype1 CAGTTTTAATAGATCCCAAGAAGAAAAGTTTTAGTTAGCTGGTACAGAACTCAGCTCATC HS_assemblymutate CAGTTTTAATAGATCCCAAGAAGAAAAGTTTTAGTTAGCTGGTACAGAACTCAGCTCATC HS_haplotype2 CAGTTTTAATAGATCCCAAGAAGAAATGTTTTAGTTAGCTGGTACAGAACTCAGCTCATC ************************** ********************************* HS_haplotype1 TCCCATGCAAGATTTCAGCCACTCCCCAGCAGAAAACAAATTTTATGGTGGGATTCCACT HS_assemblymutate TCCCATGCAAGATTTCAGCCACTCCCCAGCAGAAAACAAATTTTATGGTGGGATTCCACT HS_haplotype2 TCCCATGCAAGATTTCAGCCACTCCCCAGCAGAAAACAAATTTTATGGTGGGATTCCACT ************************************************************ HS_haplotype1 TTGGCTGATATGGCTCAGCTAATAGGCATTCCCCAGCCTGTCCAGCTCTTTATGCAATGT HS_assemblymutate TTGGCTGATATGGCTCAGCTAATAGGCATCCCCCAGCCTGTCCAGCTCTTTTTGCAATGT HS_haplotype2 TTGGCTGATATGGCTCAGCTAATAGGCATCCCCCAGCCTGTCCAGCTCTTTTTGCAATGT ***************************** ********************* ******** HS_haplotype1 ACTACACACCCAGAGGGCGCTTCAGACCTTCCTATGTATGTTTTAAAGTTAAACTATCCT HS_assemblymutate ACTACACACCCAGAGGGCGCTTCAGACCTTCCTATGTATGTTTTAAAGTTAAACTATCCT HS_haplotype2 ACTACACACCCAGAGGGCGCTTCAGACCTTCCTATGTAGTTTTTAAAGTTAAACCATCCT ************************************** ************** ***** HS_haplotype1 TTTATAGAAAGTATTCCTGAAATCAAAGTAGTAGCTGCCTCAAGAGCTGGGAAGGGCCAG HS_assemblymutate TTTATAGAAAGTATTCCTGAAATCAAAGTAGTAGCTGCCTCAAGAGCTGGGAAGGGCCAG HS_haplotype2 TTTATAGAAAGGATTCCTGAAATCAAAGTAGTAGCTGCCTCAAGAGCTGGGAAGGGCCAG *********** ************************************************ HS_haplotype1 GATATGTCCTAGAGACCTTTTCCCCCCGTGTGCCTTATCCCAGAGAAATATCACCTAAAA HS_assemblymutate GATATGTCCTAGAGACCTTTTCCCCCCGTGTGCCTTATCCCAGAGAAATATCACCTAAAA HS_haplotype2 GATATGTCCTAGAGACCTTTTCCCCCCGTGTGCCTTATCCCAGAGAAATATCACCTAAAA ************************************************************ HS_haplotype1 TGGAATGGTGCTGAAGAAATGATGGAGGAAATCAGCTGGTCGGCAGACATGGAGAAAATA HS_assemblymutate TGGAATGGTGCTGAAGAAATGATGGAGGAAATCAGCTGGTCGGCAGACATGGAGAAAATA HS_haplotype2 TGGAATGGTGCTGAAGAAATGATGGAGGAAATCAGCTGGTGGGCAGACATGGAGAAAATA **************************************** ******************* HS_haplotype1 TCTGGTGATTGAGGACATATACTTTAATAGGAATGACAGGAGAGAGACTCACTAAACTGA HS_assemblymutate TCTGGTGATTGAGGACATATACTTTAATAGGAATGACAGGAGAGAGACTCACTAAACTGA HS_haplotype2 TCTGGTGATTGAGGACATATACTTTAATAGGAATGACAGGAGAGAGACTCACTAAACTGA ************************************************************ HS_haplotype1 AGCCCCGTCCAGTACTCTTATCGAACCTCACTTCTCTTAGTTCCTTCAAAGGGGATCTCA HS_assemblymutate AGCCCCGTCCAGTACTCTTATCGAACCTCACTTCTCTTAGTTCCTTCAAAGGGGATCTCA HS_haplotype2 AGCCCCGTCCAGTCCTCTTATCGAACCTCACTTCTCTTAGTTCCTTCAAAGGGGATCTCA ************* ********************************************** HS_haplotype1 TGTATGTAAGCACCTTGACTGCCCCTAATCCCTCCCCAGCAAGAACAACTCTTAAATGCT HS_assemblymutate TGTATGTAAGCACCTTGACTGCCCCTAATCCCTCCCCAGCAAGAACAACTCTTAAATGCT HS_haplotype2 TGTATGAAAGCACCTTGACTGCCCCTAATCCCTCCCCAGCAAGGACAACTCTTAAATGCT ****** ************************************ **************** HS_haplotype1 GGGGAGCCAGGGAGCTGGAGTCTGACTAAATTCCTTCCCTCACAACAGACTTTGCTTAGC HS_assemblymutate GGGGAGCCAGGGAGCTGGAGTCTGACTAAATTCCTTCCCTCACAACAGACTTTGCTTAGC HS_haplotype2 GGGGAGCCAGGGAGCTGGAGGCTGACTAAATTCCTTCCCTCACAACAGACTTTGCTTAGC ******************** *************************************** HS_haplotype1 CGGCCGGGCCCTCAGACACAACAAGAATTACAGTGCTTCTTGCATTGATAGAGGAGAGAG HS_assemblymutate CGGCCGGGCCCTCAGACACAACAAGAATTACAGTGCTTCTTGCATTGATAGAGGAGAGAG HS_haplotype2 CGGCCGGGCCCTCAAACACAACAAGAATTACCGTGCTTCTTGCATTGATAGAGGAGAGTG ************** **************** ************************** * HS_haplotype1 ATGACCTCCCTCTACCATGGCAATCTGAGGCTGTAAACACTAACCCTTCATTGATCGATC HS_assemblymutate ATGACCTCCCTCTACCATGGCAATCTGAGGCTGTAAACACTAACCCTTCATTGATCGATC HS_haplotype2 ATGACCTCCCTCTACCATGGCAATCTGAGGCTGTAAACACTAACCCTTCATTGATTGATC ******************************************************* **** HS_haplotype1 TTACTCGGTGTGTTCACTGTAAATGTCCAGGCAGATTAGCAAACCCTGACGAAACTACAC HS_assemblymutate TTACTCGGTGTGTTCACTGTAAATGTCCAGGCAGATTAGCAAACCCTGACGAAACTACAC HS_haplotype2 TTACTCGGTGTGTTCACTGTAAATGTCCAGGCAGATTAGCAAACCCTGACGAAACTACAC ************************************************************ HS_haplotype1 ATCATGTATCCTAGGGAGAGAGAATTAACAAAATTATACGTAGATTCCAAGCATCCCAGC HS_assemblymutate ATCATGTATCCTAGGGAGAGAGAATTAACAAAATTATACGTAGATTCCAAGCATCCCAGC HS_haplotype2 ATCATGTATCCTAGGGAGAGAGAATTAACAAAATTATACGTAGATTCCAAGCATCCCAGC ************************************************************ HS_haplotype1 AGTGTAGCTCTAATCCCAAATATCCTAATTGATAATTCTGGTTATGTCCTCAGCTACTCA HS_assemblymutate AGTGTAGCTCTAATCCCAAAGATCCTAATTGATAATTCTGGTTATGTCCTCAGCTACTCA HS_haplotype2 AGTGTAGCTCTAATCCCAAAGATCCTAAGTGATAATTCTGGTTATGTCCTCAGCTACTCA ******************** ******* ******************************* HS_haplotype1 CTACTGAGTATAATTTTAAAATCTTTGTACAAAGGAGGCGGGGTGCTTTGCAGATTACTC HS_assemblymutate CAACTGAGTATAAGTTTAAAATCTTTGTACAAAGGAGGCGGGGTGCTTTGCAGATTACTC HS_haplotype2 CAACTGAGTATAAGTTTAAAATCTTTGTACAAAGGAGGCGGGGTGCTTTGCAGATTACTC * *********** ********************************************** HS_haplotype1 TGACCAAGCAGGAAAGCAGAGAGAAAGGATGGGAGGCTGCATTAAGAGGATAACAGGCTA HS_assemblymutate TGACCAAGCAGGAAAGCAGAGAGAAAGGATGGGAGGCTGCATTAAGAGGATAACAGGCTA HS_haplotype2 TGACCAAGCAGGAAAGCAGAGAGAAAGGATGGGAGGCTGCATTAAGAGGATAACAGGCTA ************************************************************ HS_haplotype1 CCCTCCTCTGTATTTTCCATACTGGCTTTCCTTCTATTGAGACCAAGATCACTTTTTTTC HS_assemblymutate CCCTCCTCTGTATTTTCCATACTGGCTTTCCTTCTATTGAGACCAAGATCACTTTTTTAC HS_haplotype2 CCCTCCTCTGTATTTTCCATACTGGCTTTCCTTCTATTGAGACCAAGATCACTTTTTTAC ********************************************************** * HS_haplotype1 TTTTCCGAAATCTCTTTCTTCCCTTTTTGCATTAATTGCTGTTGTATATATTTCATCTAT HS_assemblymutate TTTTCCGAAATCTCTTTCTTCCCTTTTTGCATTAATTGCTGTTGTATATATTTCATCTAT HS_haplotype2 TTTTCCGAAATCTCTTTCTTCCCTTATTCCATTAATTGCTGTTCTATATATTTCATCTAT ************************* ** ************** **************** HS_haplotype1 TTTCAAGTTTTGTCTTGTGTTCAGTCTTTTAGTCTGGTGTGGTTAAGTTGATCTCTACAG HS_assemblymutate TTTCAAGTTTTGTCTTGTGTTCAGTCTTTTAGTCTGGTGTGGTTAAGTTGATCTCTACAG HS_haplotype2 TTTCAAGTTTTGTCTTGTGTTCAGTCTTTTAGTCTGGTGTGGTCAAGTTGATCTCTACAG ******************************************* **************** HS_haplotype1 GGTCGGAGGCGGTGCAAGAGACACAGAAGTTCATTACCCATAATCCTGGGAGCTTCTATT HS_assemblymutate GGTCGGAGGCGGTGCAAGAGACACAGAAGTTCATTACCCATAATCCTGGGAGCTTCTATT HS_haplotype2 GGTCGGAGGCGCTGCAAGAGACACAGAAGTTCATTACCCATAATCCTGGGAGCTTCTATT *********** ************************************************ HS_haplotype1 TGTTGTGGGCAAGACAGGAGCTGGTAGCACACAGAAAGAATTCCTGCCCAGCAGCAGAAG HS_assemblymutate TGTTGTGGGCAAGACAGGAGCTGGTAGCACACAGAAAGAATTCCTGCCCAGCAGCAGAAG HS_haplotype2 TGTTGTGGGCAAGACAGGAGCTGGTAGCACACAGAAAGAATTCCTGCCCAGCAGCAGAAG ************************************************************ HS_haplotype1 AGTTTCCTCAAAACCACAGGTTTTTATATAAAAATACTGCAGTCAGCAGAGGCAGGACAG HS_assemblymutate AGTTTCCTCAAAACCACAGGTTTTTATATAAAAATACTGCAGTCAGCAGAGGCAGGACAG HS_haplotype2 AGTTTCCTCAAAACCACAGGTTTTTATATAAAAATACTGCAGTCAGCAGAGGCAGGACAG ************************************************************ HS_haplotype1 CACAGGAGATGGATCTGTTACGTGGTGTTTCGATGACTAAGTCAGG-GGAGGAAGCAAGA HS_assemblymutate CACAGGAGACGGATCTGTTATGTGGTGTTTCGATGACTAAGTCAGGCGGAGGAAGCAAGA HS_haplotype2 CACAGGAGACGGATCTGTTATGTGGTGTTTCGATGACTAAGTCAGG-GGAGGAAGCAAGA ********* ********** ************************* ************* HS_haplotype1 TCCCCCTCCCTATCTCAGCCATGGTGGCGTCGCTTGGCCAGCACTCCTGGGTAACCTGGG HS_assemblymutate TCCCCCTCCCTATCTCAGCCATGGTGGCGTCGCTTGGCCAGCACTCCTGGGTAACCTGGG HS_haplotype2 TCCCCCTCCCTATCTCAGCCATGGTGGCGTCGCTTGGCCAGCACTCCTGGGTAACCTGGG ************************************************************ HS_haplotype1 GCCTCCAGTGGGCTGGGGCTGAGGGAAGTTTTCCTAATAATTATTTATTCATTTTCCACC HS_assemblymutate GCCTCCAGTGGGCTGGGGCTGAGGGAAGTTTTCCTAATAATTATTTATTCATTTTCCACC HS_haplotype2 GCCTCCAGTGGGCTGGGGCTGAGGGAAGTTTTCCTAATAATTATTTATTCATTTTCCACC ************************************************************ HS_haplotype1 AACAGAACAGTTACCTGTAAGTGACTTCCCCCGCATTGAAATTGTGAGCTGGCTGGGGTA HS_assemblymutate AACAGAACAGTTACCTGTAAGTGACTTCCCCCGCATTGAAATTGTGAGCTGGCTGGGGTA HS_haplotype2 AACAGAACAGTTACCTGTAAGTGACTCCCCCCGCATTGAAATTGTGAGCTGGCTGGGGTA ************************** ********************************* HS_haplotype1 GTCTCTATAGAATGGGTGAGGGAAAGGGGTTCACAAATAGTTAAGAAATGTCTTAAAAAT HS_assemblymutate GTCTCTATAGAATGGGTGAGGGAAAGGGGTTCACAAATAGTTAATAAATGTCTTAAAAAT HS_haplotype2 GTCTCTATAGAATGGGTGAGGGAAAGGGGTTCACAAATAGTTAATAAATGTCTTAAAAAT ******************************************** *************** HS_haplotype1 TACAGTGCTCTTTGCAGCAGAGAAATATAACTATACAAAATATGAGTTTTTCAATGCACA HS_assemblymutate TACAGTGCTCTTTGCAGCAGAGAAATATAACTATACAAAATATGAGTTTTTCAATGCACA HS_haplotype2 TACAGTGCTCTTTGCAGCAGAGAAATATAACTATACAAAATATGAGTTTTTCAATGCACA ************************************************************ HS_haplotype1 TCACTAGAAAAATCATCATGGTTGTATTTTTCTTTTCCAGCCTCCGTTCTTTCCCTCCGT HS_assemblymutate TCACTAGAAAAAACATCATGGTTATATTTTTCTTTTCCAGCCTCCGTTCTTTCCCTCCGT HS_haplotype2 TCACTAGAAAAAACATCATGGTTATATTTTTCTTTTCCAGCCTCCGTTCTTTCCCTCCGT ************ ********** ************************************ HS_haplotype1 GCCCTGAATATCATTCCTCCTGACCAGGAGCCCCATATATGGTGGCACTGCTCCCTTTTT HS_assemblymutate GCCCTGAATATCATTCCTCCTGACCAGGAGCCCCATATATGGTGGCACTGCTCCCTTTTT HS_haplotype2 GCCCTGAATATAATTCCTCCTGACCAGGAACCCCATATATGGTGGCACTGCTCCCTTTTT *********** ***************** ****************************** HS_haplotype1 ACTGGGTTTTAAGCCTTGGTTGCAGTTGGCATGTAATACTACAAGACTTCCACCTGGTTA HS_assemblymutate ACTGGGTTTTAAGCCTTGGTTGCAGTTGGCATGTAATACTACAAGACTTCCACCTGGTTA HS_haplotype2 ACTGGGTTTTAAGCCTTGGTTGCAGTTGGCATGGAATACTACAAGACTTCCAGCTGGTTA ********************************* ****************** ******* HS_haplotype1 GGGTTATTGCCTCCATTAACAGGCTGAATAGCATGAGCCCAGGCTCAGGAAACCCTGCCC HS_assemblymutate GGGTTATTGCCTCCATTAACAGGCTGAATAGCAGGAGCCCAGGCTCAGGAAACCCTGCCC HS_haplotype2 GGGTTATTGCCTCCATTAACAGGCTGAATAGCAGGAGCCCAGGCTCAGGAAACCCTGCCC ********************************* ************************** HS_haplotype1 ACCCCATCTCTCCTGCCCCATTTGTTATTATGTGCCCCCAACCCTATGGTGGCTTTCATG HS_assemblymutate ACCCCATTTCTCCTACCCCATTTGTTATTATGTGCCCCCAACCCTATGGTGGCTTTCATG HS_haplotype2 ACCCCATTTCTCCTACCCCATTTGTTATTATGTGCCCCCAACCCTATGGTGGCTTTCTTG ******* ****** ****************************************** ** HS_haplotype1 GGATAGCATATACATCCCAACAAGTATATTAAATACTCCGCGCAGCTTCAGGTCTCTCCC HS_assemblymutate GGATAGCATATACATCCCAAGAAGTATATTAAATACTCCGCGCAGCTTCAGGTCTCTCCC HS_haplotype2 GGATAGCATATACATCCCAAGAAGTATATTAAATACTCCGCGCAGCTTGAGGTCTCTCCC ******************** *************************** *********** HS_haplotype1 CATATTTCTAATCCCCAACATCATCTTGGTGGGTTCACTGCATACCAACTTGATAAAATA HS_assemblymutate CATATTTCTAATCCCCAACATCATCTTGGTGGGTTCACTGCATACCAACTTGATAAAATA HS_haplotype2 CCTATTTCTAATCCCCAACATCATCTTGGTGGGTTCACTGCATACCAACTTGATAAAATA * ********************************************************** HS_haplotype1 AAAAATGCTAGACTCCTGAATCAAACTTCACGAGACCTGAGGCCTTCCGTAATTATAAAT HS_assemblymutate AAAAATGCTAGACTCCTGAATCAAACTTCTCGAGACCGGAGGCCTTCCGTAATTATAAAT HS_haplotype2 AAAAATGCTAGACTCCTGAATCAAACTTCTCGAGACCGGAGGCCTTCCGTAATTATAAAT ***************************** ******* ********************** HS_haplotype1 AATCCTTTTGTGGTGATCACATGCCTAAGGGTAAAATCTTTCTTTTTTGTCTAAGAATTT HS_assemblymutate AATCCTTTTGTGGTGATCACATGCCTATGGGTAAAATCTTTCTTTTTTGTCTAAGAAATT HS_haplotype2 AATCCTTTTGTGGTGATCACATGCCTATGGGTAAAATCTTTCTTTTTTGTCTAAGAAATT *************************** ***************************** ** HS_haplotype1 TTCACCAACCGCGGCGCCCACTGCACAGAATGTGTAGAAGAAAATTTGTGGCACACTCAG HS_assemblymutate TTCACCAACCGCGGCGCCCACTGCACAGAATGTGTAGAAGAAAATTTGTGGCACACTCAG HS_haplotype2 TTCACCAACCGCGGCGCCCACTGCACAGAATGTGTAGAAGAAAATTTGTGGCTCACTCAG **************************************************** ******* HS_haplotype1 CTCTGAAGAGTTCATGTATGGTGTGTCTCGATCCAAGATAGATTAGATCAGTGAGTTTGT HS_assemblymutate CTCTGAAGAGTTCATGTATGGTGTGTCTCGATCCAAGATAGATTAGATCAGTGAGTTTGT HS_haplotype2 CTCTGAAGAGTTCATGTATGGTGTGCCTCGATCCAAGATAGATTAGATCAGTGAGTTTGT ************************* ********************************** HS_haplotype1 CTTGCTCCTCTTGAGGGGTAAATTTTTATTTATTCCTTAGTATCGTCACTGTTCACCACA HS_assemblymutate CTTGCTCCTCTTGAGGGGTAAATTTTTATTTATTCCTTAGTATCGTCACTGTTCACCACA HS_haplotype2 CTTGCTCCTCTTGAGGGGTAAATTTTTATTTATTCCTTAGTATCGTCACTGTTCACCACA ************************************************************ HS_haplotype1 CACAGAAGTCTGTCTCCCATGGAAGGAATCACACACCCACCTCCTCCAGTTTCAGTTGTT HS_assemblymutate CACAGAAGTCTGTCTCCCATGGAAGGAATCACACACCCACCTCCTCCAGTTTCAGTTGTT HS_haplotype2 CACAGAAGTCTGTGTCCCATGGAAGGAATCACACACCCACCTCCTCCAGTTTCAGTTGTT ************* ********************************************** HS_haplotype1 TTCCTGCCTGCCTGTATACCATCCAACCTCATGTCACTTTAAATAAGAGAGCATCACGAC HS_assemblymutate TTCCTGCCTGCCTGAATACCATCCAACCTCATGTCACTTTAAATAAGAGAGCATCACGAC HS_haplotype2 TTCCTGCCTGACTGAATACCATCCAACCTCATGCCACTTTAAATAAGAGAGCATCACGAC ********** *** ****************** ************************** HS_haplotype1 GGTTTAATGAGCAAATTTTGAACACAGCAGGAGGGGTCACTAGCTGGCTCACAATTCAAG HS_assemblymutate GGTTTAATGAGCAAATTTTGAACACAGCAGGAGGGGTCACTAGCTGGCTCACAATTCAAG HS_haplotype2 GGTTTAATGAGCAAATTTTGAACACAGCAGGAGGGGTCACTAGCTGGCTCACAATTCAAG ************************************************************ HS_haplotype1 AATTTATTTGGAACCCTGATGGGGGTCAGAATACCCAGTGCTGCCTTAGGTTTTGAGCAG HS_assemblymutate AATTTATTTGGAACCCTGATGGGGGTCAGAATACCCAGTGCTGCCTTAGGTTTTGAGCAG HS_haplotype2 AATTTATTTTGAACCCTGATGGGGGTCAGAATACCCAGTGCTGCCTTAGGTTTTGAGCAG ********* ************************************************** HS_haplotype1 AAAGCATTCCAAAGGACAAAAGAGAAAGTGCTATGTTGTTTAATACACTTCCAGATAAGA HS_assemblymutate AAAGCATTCCAAAGGACAAAAGAGAAAGTGCTATGTTGTTTAATACACTTCCAGATAAGA HS_haplotype2 AAAGCATTCCAAAGGACAAAAGAGAAAGTGCTATGTTGTTTAATACACTTCCAGATAAGA ************************************************************ HS_haplotype1 TGCAACGTGCCCATGATGAGAGCATCCTTTAATTTTCCATATGTGAAGGCCGGGGAGCAC HS_assemblymutate TGCAACGTGCCAATGATGAGAGCATACTTTAATTTTCCATATGTGAAGGCCGGGGAGCAC HS_haplotype2 TGCAACGTGCCAATGATGAGAGCATACTTTAATTTTCCATATGTGAAGGCCGGGGAGCAC *********** ************* ********************************** HS_haplotype1 ACAGTAGGCAAAAAATTCCTTCTGCAGTGGAGGGGATTACTTTGACTTCAAAACGAGGCT HS_assemblymutate ACAGTAGGCAAAAAAATCCTTCTGAAGTGGAGGGGATTACTTTGACTTCAAAACAAGGCT HS_haplotype2 ACAGTAGGCAAAAAAATCCTTCTGAAGTGGAGGGGATTACTTTGACTTCAAAACAAGGCT *************** ******** ***************************** ***** HS_haplotype1 TCCCTGGCGGAGTCAGGAGCTACTCTTATCAGCTTGCCTTATCAGCACAAGGAGACGGGG HS_assemblymutate TCCCTGGCGGAGTCAGGAGCTACTCTTATCATCTTGCCTTATCAGCACAAGGAGACGGGG HS_haplotype2 TCCCTGGCGGAGTCAGGAGCTACTCTTATCATCTTGCCTTATCAGCACAAGGAGACGGGG ******************************* **************************** HS_haplotype1 ACCTCATTTGTAAATATAGTCATATGCCTAACCTCTCAGAAATAAAATGTGACTGCGGCC HS_assemblymutate ACCTCATTTGTAAATATAATCATATGCCTAACCTCTCAGAAATAATATGTGACTGCGGCC HS_haplotype2 ACCTCATTTGTAAATATAATCATATGCCTAACCTCTCAGAAATAATATGTGACTGCGGCC ****************** ************************** ************** HS_haplotype1 CAGCTCCAGCCACAACATAAATTTATTATTTATTAGTGGGCGGGCTTGTTGAAAGATAAG HS_assemblymutate CAGCTCCAGCCACAACATAAATTTATTATTTATTAGTGGGCGGGCTTGTTGAAAGATAAG HS_haplotype2 CAGCTCCAGCCACAACATAAATTTATTATTTATTAGTGGGCGGGCTTGTTGAAAGATAAG ************************************************************ HS_haplotype1 CTAGGGCACACTTCCCCAATAATTTTCCTACTCCGAGCATTCCTGAAAAATAACATAAGA HS_assemblymutate CTAGGGCACACTTCCCCAATAATTTTCCTACTCCGAGCATTCCTGAAAAATAACATAAGA HS_haplotype2 CTAGGGCACACTTCCCCAATAATTTTCCTACTCCGAGCATTCCTGAAAAATAACATAAGA ************************************************************ HS_haplotype1 TTTCCATGCCACCCTCCAGAGGTTGCAAAGTTAAAGAACAGTCTTGTGGTGAATATACGA HS_assemblymutate TTTCCATGCCACCCTCCAGAGGTTGCAAAGTTAAAGAACAGTCTTGTGGTGAATATACGA HS_haplotype2 TTTCCATGCCACCCTCCTGAGGTTGCAAAGTTAAAGAACAGTCTTGTGGTGAATATACGA ***************** ****************************************** HS_haplotype1 AGTTCGGTCTCCATATCAGATCAGCCTTCAGCTGTTATATGATGAGAAGATGTCTGCAAT HS_assemblymutate AGTTCGGTCTCCATATCAGATCAGCCTTCAGCTGTTATATGATGAGAAGATGTCTGCAAT HS_haplotype2 AGTTCGGCCTCCATTTCAGATCAGCCTTCCGCTGTTATATGATGAGAAGATGTCTGCAAT ******* ****** ************** ****************************** HS_haplotype1 TTGAAATTAGAGAATTGCATGCTGACCGCTCCCTGGTTTCACTGAGAAGATTTATATACA HS_assemblymutate TTGAAATTAGAGAATTGCATGCTGACCGCTCCCTGGTTTCACTGAGAAGATTTATATACA HS_haplotype2 TTGAAATTAGAGAATTGCATGCTGACCGCTCTCTGGTTTCACTGAGAACATTTATATACA ******************************* **************** *********** HS_haplotype1 CTAGATTGATACAATAGCTACCGCACCTTTCACCTTACGACACAGCTAAACTTGAATCTT HS_assemblymutate CTAGATTGATACAATAGCTACCGCACCTTTCACCTTACGACACAGCTAAACTTGAATCTT HS_haplotype2 CTAGATTGATACAATAGCTACCGCACCTTTCACCTTACGACACAGCTAAACTTGAATCTT ************************************************************ HS_haplotype1 CTGAAGCTATGAAAACACTAACATCGCCTATACAAAACAAAGAGCTTGTGTCAGCGGGAG HS_assemblymutate CTGAAGGTATGAAAACAGTAACATAGCCTATACAAAACAAAGAGCTTGTGTCAGCGGGAG HS_haplotype2 CTGAAGGTGTGAAAACAGTAACATAGCGTATACAATCCAAAGAGCTTGTGTCAGCGGGAG ****** * ******** ****** ** ******* *********************** HS_haplotype1 CAATTGA-CGTCCGCTCTGCAACTTTGAGTCTCTGAAGAAAGGGCTCAACACCCAGCTCT HS_assemblymutate CAATTGAGCGTCCGCTCTGCAACTTTGAGTCTCTGAAGAAAGGGCTCAACACCCAGCTCT HS_haplotype2 CAATTGA-CGTCCGCTCTGCAACTTTGAGTCTCTGAAGAAAGGGCACAACACCCAGCTCT ******* ************************************* ************** HS_haplotype1 CCCGGATCTGGCCTTTTTAGATGTTCTTATAGCTCTTTTGAAATAGCTCTGAAAGCATCA HS_assemblymutate CCCGGATCTGGCCTTTTTAGATGTTCTTATAGCTCTTTTGAAATAGCTCTGAAAGCATCA HS_haplotype2 CCCGGATCTGGCCTTTTTAGATGTTCTTATAGCTCTTTTGAAATAGCTCTGAAAGCATCA ************************************************************ HS_haplotype1 ACTCCACCACGGCGCGCTGGAGTTGGTGGAGAATCGCAGGAGAGCCCAGCCTGATAGAAT HS_assemblymutate ACTCCACCACAGCGCGCTGGAGTTGGTGGAGAATCGCAGGAGAGCCCAGCCTGATAGAAT HS_haplotype2 ACTCCACCACAGCGCGCTGGAGTTGGTGGAGAATCGCAGGAGAGCCCAGCCTGATAGAAT ********** ************************************************* HS_haplotype1 ATTGCTGAGTGCAGTATATGCTTTCTAAACTGGAACGCTTAAATTAATCCTATTGTGGTT HS_assemblymutate ATTGCTGGGTGCAGTATATGCTTTCTAAACTGGAACGCTTAAATTAATCCTATTGTGGTT HS_haplotype2 ATTGCTGGGTGCAGTATATGCTTACTAAACTGGAACGCTTAAATTAATCCTATTGTGGTT ******* *************** ************************************ HS_haplotype1 GTGTGCTCCAGGCAACACATCCTCACAGCAGCACATTCTCGTGGTGGTGATGTAACCGCG HS_assemblymutate GTGTGCTCCAGGCAACACATCCTCACAGCAGCACATTCTCGTGGTGGTGATGTAACCGCG HS_haplotype2 GTGTGCTCCAGGCAACACATCCTCACAGCAGCACTTTCTCGTGGTGGTGATGTAACCGCG ********************************** ************************* HS_haplotype1 TTAGGTGACCCTGAGGCCCATCTCACCTTCATCTAAAATTGTAAAAATATCATATTCTAC HS_assemblymutate TTAGGTGACCCTGAGGCCCATCTCACCTTCATCTAAAATTGTAAAAATATCATATTCTAC HS_haplotype2 TTAGGTGACCCTGAGGCCCGTCTCACCTTCATCTAAAATTGTAAAAATATCATATTCTAC ******************* **************************************** HS_haplotype1 TACACTTTCCATGTAGAGCAAGCCTCCCAGGATGATCTACTTAGTTTTTATTTTCTCCTC HS_assemblymutate TACACTTTCCATGTAGAGCAAGCCTCCCAGGATGATCTACTTAGTTTTTATTTTCTCCTC HS_haplotype2 TACACTTTCCATGTAGAGCAAGCCTCCCAGGATGATCTACTTAGCTTTTATTTTCTCCTC ******************************************** *************** HS_haplotype1 TGCTTTATTCCCATGAAAACACTAGCAGAAGGATGCCCCTCCCCCTCAAGTGCAAAGATA HS_assemblymutate TGCTTTATTCCCATGAAAACACTAGCAGAAGGATGCCCCTCCCCCTCAAGTGCAAAGATA HS_haplotype2 TGCTTTATTCCCATGAAAACACTAGCAGAAGGATGCCCCTCCCCCTCAAGTGCAAAGATA ************************************************************ HS_haplotype1 GACATAGGAAGAAAAGTGTTATCCATGA----GTAACTGAAGCCCAGGGGTGAAATATAT HS_assemblymutate GACATAGGAAGAAAAGTGTTATCCATGATTTGGTAACTGAAGCCCAGGGGTGAAATATAT HS_haplotype2 GACATAGGAAGAAAAGTGTTATCCATGA----GTAACTGAAGCCCAGGGGTGAAATATTT **************************** ************************** * HS_haplotype1 TGGCACAGCGCAGGCCATTTTAGCACAAGCCAGGTGAATTGCTGCAGTGTGAAGATTGCC HS_assemblymutate TGGCACAGCGCAGGCCATTTTAGCACAAGCCAGGTGAATTGCTGCAGTGTGAAGATTGCC HS_haplotype2 TTGCACAGCGCAGGCCATTTTAGCACAAGCCAGGTGAATTGCTGCATTGTGAAGATTGCC * ******************************************** ************* HS_haplotype1 AAATAATCATGAGAGATTTGCATACTCACAAAACATTGCAGTGCAGTGATCTTGGCCTCA HS_assemblymutate AAATAATCATGAGAGATTTGCATACTCACAAAACATTGCAGTGCAGTGATCTTGGCCTCA HS_haplotype2 AAATAATCATGAGAGATTTGCATACTCACAAAACATTGCAGTGCAGTGATCTTGGCCTCA ************************************************************ HS_haplotype1 AATATCGGTAGAAACAAACTGCATAGAAAAAATTGGTAAGAGATACTACAGGATCATGAC HS_assemblymutate AATATCGGTAGAAACAAACTGCATAGAAAAAATTGGTAAGAGATACTACAGGATCATGAC HS_haplotype2 AATATCGGTAGAAACAAACTGCATAGAGAAAATTGGTAAGAGATACTACAGGATCATGAA *************************** ******************************* HS_haplotype1 CTAGCCGGCAACATCCACCTTTAATCCCAGAAATGAAGCTTTATAATCCCTTTACAGAGT HS_assemblymutate CTAGCCGGCAACATCCACCTTTAATCCCAGAAATGAAGCTTTATAATCCCTTTACAGAGT HS_haplotype2 CTAGCCGGCAACATCCACCTTTAATCCCAGAAATGAAGCTTTATAATCCCTTTACAGAGT ************************************************************ HS_haplotype1 GGGAAAAGGTCTTCTGTTTTCATATGAACTTACAAGCAGGCTATTTTTTTATCATCCTCT HS_assemblymutate GGGAAAAGGTCTTCTGTTTTCATATGAACTTACAAGCAGGCTATTTTTTTATCATCCTCT HS_haplotype2 GGGAAAAGGTCTTCTGTTTTCATATGAACATACAAGCAGGCTATTTTTCTATCATCCTCT ***************************** ****************** *********** HS_haplotype1 GTGCTAATTTGGAAGACCTCCTGTTGAGAGGTCACCACATCTCCCTTTGTGGAGCCAAGA HS_assemblymutate GTGCTAATTTGGAAGACCTCCTGTTGAGAGGTCACCACATCTCCCTTTGTGGAGCCAAGA HS_haplotype2 GTGCTAATTTGGAAGACCTCCTGTGGAGAGGTCACCACATCTCCCTTTGTGGAGCCAAGA ************************ *********************************** HS_haplotype1 GTGGAAGGCAGAGGTTATTGAGCCGCTCCTGGCCAATTTTGCGTGGAAGCTTTGCTAGAA HS_assemblymutate GTGGAAGGCAGAGGTTATTGAGCCGCTCCTGGCCAATTTTGCGTGGAAGCTTTGCTAGAA HS_haplotype2 GTGGAAGGCAGAGGTTATTGAGCCGCTCCTGGCCAATTTTGCGTGGAAGCTTTGCTAGAA ************************************************************ HS_haplotype1 AAGATGGGCTGCCTGCCTGGGTTTCCTCAAATATGTTCCAAATCTCACAGGA----TACC HS_assemblymutate AAGATGGGCTGCCTGCCTGGGTTTCCTCAAATATGTTCCAAATCTCACAGGAGCCCTACC HS_haplotype2 AAGATGGTCTGCCTGCCTGGGTTTCCTCAAATATGTTCCAAATCTCACAGGA----TACC ******* ******************************************** **** HS_haplotype1 ACATTCAACTCCCTGAGCAAAGTCTGCTGGCATTCCACCCTGGTGATGGAGGCACGACTC HS_assemblymutate ACATTCAACTCCCTGAGCAAAGTCTGCTGGCATTCCACCCTGGTGATGGAGGCACGACTC HS_haplotype2 ACATTCAACTCCCTGAGCAAAGTCTGCTGGCATTCCAGCCTGGTGATGGAGGCACGACTC ************************************* ********************** HS_haplotype1 CAGGTGTAATTAAAACAAAGAACATGCCCGCCCAGGTACTGGTGAAAATACATGTGCACC HS_assemblymutate CAGGTGTAATTAAAACAAAGAACATGCCCGCCCAGGTACTGGTGAAAATACATGTGCACC HS_haplotype2 CAGGTGTAATTAAAACAAAGAACATGCCCGCCCAGGTACTGGTGAAAATACATGTGCACC ************************************************************ HS_haplotype1 ACATTTTACAGCATAGAATCATCTCACTGGAGTCTTGTCTGCTTGAAGAAATTCTCCTCC HS_assemblymutate ACATTTTACAGCATAGAATCATCTCACTGGAGTCTTGTCTGCTTGAAGAAATTCTCCTCC HS_haplotype2 ACATTTTACAGCATAGAATCATCTCACTGGAGTCTTGTCTGCTTGAAGAAATTCTCCTCC ************************************************************ HS_haplotype1 CAAGTGCTTCTCTTTCTGGGTTGAAAAATAATAGGTGATGTTTTTGTCCCTATAAATGTA HS_assemblymutate CAAGTGCTTCTCTTTCTGGGTTGAATAATAATAGGTGATGTTTTTGTCCCTATAAATGTA HS_haplotype2 CAAGTGCTTCTCTTTCTTGGTTGCATAATAATAGGTGATGTTTTCGTCCCTATAAATGTA ***************** ***** * ****************** *************** HS_haplotype1 TATTGAATATTAAGTAATGTTTTACCCAGGGTGGTAATGGTAGAAAATAATCAGGGGACA HS_assemblymutate TATTGAATATTAAGTAATGTTTTACCCAGGGTGGTAATGGTAGAAAATAATCAGGGGACA HS_haplotype2 TATTGAATATTAAGTAATGTTTTACCCAGGGTGGTAATGGTAGAAAATAATCAGGGGACA ************************************************************ HS_haplotype1 CAACACATCCTATGTGGAGAGGGTGATCCAAAATGAACCGTCTGGAGTCGCTGTTGCAAG HS_assemblymutate CAACACATCCTATGTGGAGAGGGTGATCCAAAATGAACCGTCTGGAGTCGCTGTTGCAAG HS_haplotype2 CAACACATCCTATGTGGAGAGGGTGATCCAAAATGAACCGTCTGGAGTCTCTGTTGCAAG ************************************************* ********** HS_haplotype1 AGAACAAGGAAGCCATTGTCCACAATCCCTTCCTTTATCAGCACACAAACAATTTTCCCA HS_assemblymutate AGAACAAGGAAGCCATTGTCCACAATCCCTTCCTTTATCAGCACACAAACAATTTTCCCA HS_haplotype2 AGAACAAGGAAGCCATTGTCCACAATCCCTTCCTTTATCAGCACACAAACAATTTTCCCA ************************************************************ HS_haplotype1 GCGGGCAGCCCCAGGGACCGTGAAGAACACAGCCTTCCTCCCAAATGGTTTAAATTTCCC HS_assemblymutate GCGGGCAGCCCCAGGGACCGTGAAGAACACAGCCTTCCTCCCAAATGGTTTAAATTTCCC HS_haplotype2 GCGGGCAGCCCCAGGGACCGTGAAGAACACAGCCTTCCTCCCAAATGGTTTAAATTTCCC ************************************************************ HS_haplotype1 CCAAATTCGGGTCTTGCCATTAGTAGGGTGGCTCTGAAACTCAGAATGAATATACAAAAT HS_assemblymutate CCAAATTCGGGTCTTGCCATTAGTAGGGTGGCTCTGAAACTCAGAATGAATATACAAAAT HS_haplotype2 CCAAATTCGGGTCTTGCCATTAGTAGGGTGGCTCTGAAACTCAGAATGAATATACAAAAT ************************************************************ HS_haplotype1 TGTGTGATCTGCCTGGGGACATGGTATGAAACCCTTCAACAAAAATTAAATACTTAGGCT HS_assemblymutate TGTGTGATCTGCCTGGGGACATGGTATGAAACCCTTCAACAAAAATTAAATAGTTAGGCT HS_haplotype2 TGTGTGATCTGCCTGGGAACATGGTATGAAACCCTTCAACAAAAATTAAATAGTTAGGCT ***************** ********************************** ******* HS_haplotype1 TTCAAAGGCCTTCCCCCATGCTAACAGGCAACAGATCATTTTTGGGCCAGCCTGGCGACG HS_assemblymutate TTCAAAGGCCTTCCCCCATGCTAATAGGCAACAGATCATTTTTTGGCCAGCCTGGCGACG HS_haplotype2 TTCAAAGGCCTTCCCCCATGCTAATAGGCAACAGATCATTTTTTGGCCAGCCTGGCGACG ************************ ****************** **************** HS_haplotype1 GTGAGCTGGGAGGTTTAAAAGACAGACTATATATGGAATAATAAAGTACAGAGCTGAAAA HS_assemblymutate GTGAGCTGGGAGGTTTAAAAGACAGACTATATATGGAATAATTAAGTACAGAGCTGAAAA HS_haplotype2 GTGAGCTGGGAGGTTTAAAAGACAGACTATATATGGAATAATTAAGTACAGAGCTGAAAA ****************************************** ***************** HS_haplotype1 GCAACCCCTGGGCTGGGTGAATCATAGGTTTATTTTTACATATTCTAATCAAGGCGGCGG HS_assemblymutate GCAACCCCTGGGCTGGGTGAATCATAGGTTTGTTTTTACATATTCTAATCAAGGCGGCGG HS_haplotype2 GCAACCCCTGGGCTGGGTGAATCATAGGTTTGTTTTTACATATTCTAATCAAGGCGGCGG ******************************* **************************** HS_haplotype1 GAGGTGCTTGCCTCTGTATGCTGAATAGTTACAGGAACCCCTTCCTCTGGTCCTCATGGA HS_assemblymutate GAGGTGCTTGCCTCTGTATGCTGAATAGTTACAGGAACCCCTTCCTCTGGTCCTCATGGA HS_haplotype2 GAGGTGCTTGCCTCTGTATGCTGAATAGTTACAGGAACCCCTTCCTCTGGTCCTCATGGA ************************************************************ HS_haplotype1 GATCACTATTGCTCTGTAAGAACTCATTGCACTGAGATACTTACCTAGTCGCTCACTTTG HS_assemblymutate GATCACTATTGCTCTGTAAGAACTCATTGCAGTGAGATACTTACCTAGTCGCTCACTTTG HS_haplotype2 GATCACTATTGCTCTGTAAGAACTCATTGCAGTGAGATACTTACCTAGTCGCTCACTTTG ******************************* **************************** HS_haplotype1 GAGCCCCACCCTTTACTTCTTTGGTCCTATACAGCAGATGGTGGCTTCTAGCAGCAACCA HS_assemblymutate GAGCCCCACCCTTTACTTCTTTGGTCCTATATAGCAGATGGTGGCTTCTAGCAGCAACCA HS_haplotype2 GAGCCCCACCCTTTACTTCTTTGGTCCTATATAGCAGATGGTGGCTTCTAGCAGCAACCA ******************************* **************************** HS_haplotype1 ATTATAAGCCACATCGGCCCCTCAAACTTCTAATGAACACATATATACTAAGCAGGCCCA HS_assemblymutate ATTATAAGCCACATCGGCCCCTCAAACTTCTAATGAACACATATATACTAAGCAGGCCCA HS_haplotype2 ATTATAAGCCACATCGGCCCCTCAAACTTCTAATGAACACATATATACTAAGCAGGCCCA ************************************************************ HS_haplotype1 CTAGAGATTCCCTGCAATTTAGTGGGACTCCCAGTGATAAATAATTAAAAGGTGGCATTC HS_assemblymutate CTAGAGATTCCCTGCAATTTAGTGGGACTCCCAGTGATAAATAATTAAAAGGTGGCATTC HS_haplotype2 CTAGAGATTCCCTGCAATTTAGTGGGCCTCCCAGTGATAAATAATTAAAAGGTGGCATTC ************************** ********************************* HS_haplotype1 ACTATGAAGATGATAAGTTATCTCTGTTGATACCAGAGGAAGAACCCATGCATTCTAAGT HS_assemblymutate ACTATGAAGATGATAAGTTATCTCTGTTGATACCAGAGGAAGAACCCATGCATTCTAAGT HS_haplotype2 ACTATGAAGATGATAAGTTATCTCTGTTGATACCAGAGGAAGAACCCATGCATTCTAAGT ************************************************************ HS_haplotype1 TTGAAAAAGAATGTCATGAATGAAGATCTCTTAGAACTTTGCGCCCAGTTTCATATTGAT HS_assemblymutate TTGAAAAAGAATGTCATGAATGAAGATCTCTTAGAACTTTGCGCCCAGTTTCATATTGAT HS_haplotype2 TTGAAAAAGAATGTCATGAATGAAGATCTCTTAGAACTTTGCGCCCAGTTTCATATTGAT ************************************************************ HS_haplotype1 TAACAAAAGAAATGGCAATTGGGCACGTAAAACACGCCAGGGTGCAGCCTGAAATGAACC HS_assemblymutate TAACAAAAGAAATGGCAATTGGGCACGTAAAACACGCCAGGGTGCAGCCTGAAATGAACC HS_haplotype2 TAACAAAAGAAATGGCAATTGGGCACGTAAAACACGCCAGGGTGCAGCCTGAAATGAACC ************************************************************ HS_haplotype1 TCTGCCTCCTCTGCACCACACAATTTTCACACAGCCTCTCCTCATGTCCCGGGTCTCAAC HS_assemblymutate TCTGCCTCCTCTGCACCACACAATTTTCACACAGCCTCTCCTCATGTCCCGGGTCTCAAC HS_haplotype2 TCTGCCTCCTCTACACCACACAATTTTCACACAGCCTCTCCTCATGTCCCGGGTCTCAAC ************ *********************************************** HS_haplotype1 ACACAAATACCACAGCCTGGGGAGAAAGCTTCTGGGCATTCCCCAAACGTGAGCAGAGGT HS_assemblymutate ACACAAATACCACAGCCTGGGGAGAAAGCTTCTGGGCATTCCCCAAACGTGAGCAGAGGT HS_haplotype2 ACACAAATACCACAGCCTGGGGAGAAAGCTTCTGGGCATTCCCCAAACGTGAGCAGAGGT ************************************************************ HS_haplotype1 CAATCATAGAGACAGTTCAAAATGAGGCTCAGACACCAAGTTTAAAACAGGAAATTACTC HS_assemblymutate CAATCATAGAGACAGTTCAAAATGAGGCTCAGACACCAAGTTTAAAACAGGAAATTACTC HS_haplotype2 CAATCATAGAGACAGTTCAAAATGAGGCTCAGCCACCAAGTTTAAAACAGGAAATTACTC ******************************** *************************** HS_haplotype1 CTATGTGTTTTACTACAATTCCCCTAATCAGTTTTGTTAAGTAATCTCAAAATAGGAGAC HS_assemblymutate CTATGTGTTTTACTACAATTCCCCTAATCAGTTTTGTTAAGTAATCTCAAAATAGGAGAC HS_haplotype2 CTATGTGTTTTACTGCAATTCCCCTAATCAGTTTTGTTAAGTAATCTCAAAATAGGAGAC ************** ********************************************* HS_haplotype1 AAAATATATAAAGCTTAAGTTAAGTAGAGAGATACGATGGAGCGCCTTAAAATGTATTTA HS_assemblymutate AAAATATATAAAGCTTAAGTTAAGTAGAGCGATACGATGGAGCGCCTTAAAATGTATTTA HS_haplotype2 AAAATATATAAAGCTTAAGTTAAGTAGAGCGATACGATGGAGCGCCTTAAAATGTATTTA ***************************** ****************************** HS_haplotype1 GCCCGCTACAAGGAGTGCAACCGCCCGAGGTCAGACAGACAGCTCCGGCCCCTGTGAATT HS_assemblymutate GCCCGCTACAAGGAGAGCAACCGCCCGAGGTCAGACAGACAGCTCCGGCCCCTGTGAATT HS_haplotype2 GCCCGCTACAAGGAGAGCAACCGCCCGAGGTCAGACAGACAGCTCCGGCCCCTGTGAATT *************** ******************************************** HS_haplotype1 TCCAAAGCAGTTGTTCCACTCTTGAGCTAATTAAAAAAAGATATTTTTATTGAAATGTCA HS_assemblymutate TCCAAAGCAGTTGTTCCACTCTTGAGCTAATTAAAAAAAGATATTTTTATTGAAATGTCA HS_haplotype2 TCCAAAGCAGTTGTTCCACTCTTGAGCTAATTAAAAAAAGATATTTTTATTGAAATGTCA ************************************************************ HS_haplotype1 TATTAGCCACCCTGCTAGTGTTATGCACTCAGAGACTAAGGTCCTAATGGCATGTGCTTC HS_assemblymutate TATTAGCCACCCTGCTAGTGTTACGCACTCAGAGACTAAGGTCCTAATGGCATGTGCTTC HS_haplotype2 TATTAGCCACCCTGCTAGTGTTACGCACTCAGAGACTAAGGTCCTAATGGCATGTGCTTC *********************** ************************************ HS_haplotype1 CTGCTAAGCAAGGGACTCTCTCTGTTATAACCATCCCGGGCGCCAGTAGTTCTGTTATGA HS_assemblymutate CTGCTAAGGAAGGGACTCTCTCTGTTATAACCATCCCGGGCGCCAGTAGTTCTGTTATGA HS_haplotype2 CTGCTAAGGAAGGGACTCTCTCTGTTATAACCATCCCGGGCGACAGTAGTTCTGTTATGA ******** ********************************* ***************** HS_haplotype1 CGCGGCTTTCATGGCGTGAAGATAGACTCTCACCACCCGCCCCAAAATAGAGAGTTTAGT HS_assemblymutate CGCGGCTTTCATGGCGTGAAGATAGACTCTCACCACCCGCCCCAAAATAGAGAGTTTAGT HS_haplotype2 CGCGGCTTTCATGGCGTGAAGATAGACTCTCACCACCCGCCCCAAAATAGAGAGTTTAGT ************************************************************ HS_haplotype1 GAGTGTGTGATCTGCAAGCATTTCCCCAAATTTATATAGCAGTATTGCCATTAGAAGCTG HS_assemblymutate GAGTGTGTGATCTGCAAGCATTTCCCCAAATTTATATAGCAGTATTGCCATTAGAAGCTG HS_haplotype2 GAGTGTGTGATCTGCAAGCATTTCCCCAAATTTATATAGCAGTATTGCCATTAGAAGCTG ************************************************************ HS_haplotype1 CTGCCCTGCCTTGTTCCAGCATTTTCTACTAAAGAATGTAATGTAGAGTAGGCTGAAGAG HS_assemblymutate CTGCCCTGCCTTGTTCCAGCATTTTCTACTAAAGAATGTAATGGAGAGTAGGCTGAAGCG HS_haplotype2 CTGCCCTGCCTTGTTCCAGCATTTTCTACTAAAGAATGTAATGGAGAGTAGGCTGAAGCG ******************************************* ************** * HS_haplotype1 GCTCTACTCATGTAATGTTTTATAGACAGCATTAACTCCTAATAATGGGTAGGAAGAAAT HS_assemblymutate GCTCTACTCATGTGATTTTTTATAGACAGCATTAACTCCTAATAATGGGTAGGCAGAAAT HS_haplotype2 GCTCTACTCATGTGATTTTTTATAGACAGCATTAACTCCTAATAATGGGTAGGCAGAAAT ************* ** ************************************ ****** HS_haplotype1 GTTGAGGGATTTTGAAACATCTACCATGCTTAAAAGGATTTCTGGTGATAATCAGAACAT HS_assemblymutate GTTGAGGGATTTTCAAACATCTACCATGCTTTAAAGGATTTCTGGTGATAATCAGAACAT HS_haplotype2 GTTGAGGGATTTTCAAACATCTACCATGCTTTAAAGGATTTCTGGTGATAATCAGAACAT ************* ***************** **************************** HS_haplotype1 TGCCCAGCAGCCTGAGACAGAATGAGACCTGCTTCACTGCTACAATGGTGGGACATAGCC HS_assemblymutate TGCCCAGCAGCCTGAGACAGAATGAGACCTGCTTCACTGCTACAATGGTGGGACATAGCC HS_haplotype2 TGCCCAGCAGCCTGAGACAGAATGAGACCTGCTTCACTGCTACAATGGTGGGACATAGCC ************************************************************ HS_haplotype1 TGCCTGGGGAAGCCCCTATTTAAAGGATGGCTTCACATGTTCACGAGACCTAAAATTAGC HS_assemblymutate TGCCTGGGGAAGCCCCTATTTAAAGGATGGCTTCACATGTTCAGGAGACCTAAAATTAGC HS_haplotype2 TGCCTGGGGAAGCCCCTATTTAAAGGATGGCTTCACATGTTCAGGAGACCTAAAATTAGC ******************************************* **************** HS_haplotype1 GGGGTTTTTTGAGCATACTCGGCTGGCCACAAAGACGTGATATTTACCACTCAGGTCAGC HS_assemblymutate GGGGTTTTTTGAGCATACTCGGCTGGCCACAAAGACGTGATATTTACCACTCAGGTCAGC HS_haplotype2 GGGGTTTTTTGAGCATACTCGGCTGGCCACAAAGACGTGATATTTACCACTCAGGTCAGC ************************************************************ HS_haplotype1 ATGAGGCTTATTGTCTGGGTTTCAGTCCAGGACAGAGGGTGCTGCACTTTCTTCCCCATA HS_assemblymutate ATCAGGCTTATTGTCTGGGTTTCAATCCAGGACAGAGGGTGCTGCACTTTCTTCCCCATA HS_haplotype2 ATCAGGCTTATTGTCTGGGTTTCAATCCAGGACAGAGGGTGCTGCACTTTCTTCCCCATA ** ********************* *********************************** HS_haplotype1 CATCATGCCCGGCTCACTCCTGCCTCAAGGTAAGGTGCCACCGCTGGAACTCCTCTACAT HS_assemblymutate CAACATGCCCGGCTCACTCCTGCCTCAAGGTAAGGTGCCACCGCTGGAACTCCTCTACAT HS_haplotype2 CAACATGCCCGGCTCACTCCTGCGTCAAGGTAAGGTGCCACCGCTGGAACTCCTCTACAT ** ******************** ************************************ HS_haplotype1 ATCATGAAGGGCCAGGACTATCTTTCCTTCCAGGAGAGGTAGAGATTGCTGTTTCCATGG HS_assemblymutate ATCATGAAGGGCCAGGACTATCTTTCCTTCCAGGAGAGGTAGAGATTGCTGTTTCCATGG HS_haplotype2 ATCATGAAGGGCCAGGACTATCTTTCCTTCCAGGAGAGGTTGAGATTGCTGTTTCCATGG **************************************** ******************* HS_haplotype1 GTGTATACATACTCGGGAGGTGATCAATACATGGATATTCAAAATGTACAGAGCATGGGT HS_assemblymutate GTGTATACATACTCGGGAGGTGATCAATACATGGATATTCAAAATGTACAGAGCATGGGT HS_haplotype2 GTATATACATACTCGGGAGGTGATCAATACATGGATATTCAAAATGTACAGAGCATGGGT ** ********************************************************* HS_haplotype1 GGGGTGCTAAGGGGTCAGAAGAGGTGGCTTCTCTAATTTACCTGTATTTAAAACAAACAG HS_assemblymutate GGGGTGCTAAGGGGTCAGAAGAGGTGGCTTCTCTAATTTACCTGTATTTAAAACAAACAG HS_haplotype2 GGGGTGCTAAGGGGTCAGAAGAGGTGGCTTCTCTAATTTACCTGTATTTAAAACAAACAG ************************************************************ HS_haplotype1 ATACTCTTACATGATAGTCTCCCCGCCAGGGAGGCAGGACTTATAAAAAGCTGGTTTCAT HS_assemblymutate ATACTCTTACATGATAGTCTCCCCGCCAGGGAGGCAGGACTTATAAAAAGCTGGTTTCAT HS_haplotype2 ATACTCTTACATGATAGTCTCCCCGCCAGGGAGGCAGGACTTATAAAAAGCTGGTTTCAT ************************************************************ HS_haplotype1 TACCCTGCTCCTCACGCTTCCTACAGGCATGACCGCAGCACCACAGCCTGGTGTGGCTGT HS_assemblymutate TACCCTGCTCCTCACGCTTCCTACAGGCATGACCGCAGCACCACAGCCTGGTGTGGCTGT HS_haplotype2 TACCCTGCTCCTCACGCTTCCTACAGGCATGACCGCAGCACCACAGCCTGGTGTGGCTGT ************************************************************ HS_haplotype1 GAATCTTTAAAATTAAGGGGGCACCACGGCCTGAGATCCACCCTTCTAACTTCAGGAACC HS_assemblymutate GAATCTTTAAAATTAAGGGGGCACCACGGCCTGAGATCCACCCTTCTAACTTCAGGAACC HS_haplotype2 GAATCTTTAAAATTAAGGGGGCACCACGGCCTGAGATCCACCCTTCTAACTTCAGGAACC ************************************************************ HS_haplotype1 AAGCAATTTATGTTTCTTCCTCTACTTGAAAAAATACATAAATCAACGTGGTGTGGCTGA HS_assemblymutate AAGCAATTTATGTTTCTTCCTCTACTTGAAAAAATACATAAATCAACGTGGTGTGGCTGA HS_haplotype2 AAGCAATTTATGTTTCTTCCTCTACTTGAAAAAATACATAAATCAACGTGGTGTGGCTGA ************************************************************ HS_haplotype1 GACGGCTCACGTGGTGTTGTTGCCTCGATAGGAAAAAGAACATTATATCCATTTAATGAG HS_assemblymutate GACGGCTCACGTGGTGTTGTTGCCTCGATAGGAAAAAGAACATTATATCCATTTAATGAG HS_haplotype2 GACGGCTCACGTGGTGTTGTTGCCTCGATAGGAAAAAGAACATTATATCCATTTAATGAG ************************************************************ HS_haplotype1 CAGGGGGTTTTCCCAAAAGCAGATGTTACTGAGGGCCAGGAGAGACATGAGCCCTTCAGA HS_assemblymutate CAGGGGGTTTTCCCAAAAGCAGATGTTACTGAGGGCCAGGAGAGACATGAGCCCTTCAGA HS_haplotype2 CAGGGGGTTTTCCCAAAAGCAGATGTTACTGAGGGCCAGGAGAGACATGAGCCCTTCAGA ************************************************************ HS_haplotype1 GAATGTAAAAAAAACCTCTGGTCTGCCAAATTGTTGCTACAGGCGGCGCAGCCTCCACCA HS_assemblymutate GAATGTAAAAAAAACCTCTGGTCTGCCAAATTGTTGCTACAGGCGGCGCAGCCTCCACCA HS_haplotype2 GAATGTAAAAAAAACCTCTGGTCTGCCAAATTGTTGCTACAGGCGGCGCAGCCTCCACCA ************************************************************ HS_haplotype1 CCAGGTGCCTGGCTCAATTAACAAGGCAAATCCTAAATTTCCACTCCACCTGGGTGTTTC HS_assemblymutate CCAGGTGCCTGGCTCAATTAACAAGGCAAATCCTAAATTTCCACTCCACCTGGGTGTTTC HS_haplotype2 CCAGGTGCCTGGCTCAATTAACAAGGCAAATCCTAAATTTCCACTCCACCTGGGTGTTTC ************************************************************ HS_haplotype1 CTTTGGGGCTACAACTCACGCACAATAAGTATTTACTTGAATGTGGATGTGAGGCACCAG HS_assemblymutate CTTTGGGGCTACAACTCACGCACAATAAGTATTTACTTGAATGTGGATGTGAGGCACCAG HS_haplotype2 CTTTGGGGCTACAACTCACGCACAATAAGTATTTACTTGAATGTGGATGTGAGGCACCAG ************************************************************ HS_haplotype1 CCTCCATGCTTATCTCAAATTTTTTTCTTTCTGGTATGTTCTCCATCATTCTGCACCTTC HS_assemblymutate CCTCCATGCTTATCTCAAATTTTTTTCTTTCTGGTATGTTCTCCATCATTCTGCACCTTC HS_haplotype2 CCTCCATGCTTATCTCAAATTTTTTTCTTTCTGGTATGTTCTCCATCATTCTGCACCTTC ************************************************************ HS_haplotype1 ACACTCTGACTTCATGGAGAAATGATGTTACCATCTTTATTAAGTATATACTAGGGACGA HS_assemblymutate ACACTCTGACTTCATGGAGAAATGATGTTACCATCTTTATTAAGTATATACTAGGGACGA HS_haplotype2 ACACTCTGACTTCATGGAGAAATGATGTTACCATCTTTATTAAGTATATACTAGGGACGA ************************************************************ HS_haplotype1 CTTAAAATACAATGTGCTACCCCTGTGGGGGAAAAAGCACAAGACTAAATGCCCTGGCCA HS_assemblymutate CTTAAAATACAATGTGCTACCCCTGTGGGGGAAAAAGCACAAGACTAAATGCCCTGGCCA HS_haplotype2 CTTAAAATACAATGTGCTACCCCTGTGGGGGAAAAAGCACAAGACTAAATGCCCTGGCCA ************************************************************ HS_haplotype1 TGCATCCAGCAGACCAGAAGTAAGTGCCCAGTAAGAAATATCACAAAAACACAGGCCAAG HS_assemblymutate TGCATCCAGCAGACCAGAAGTAAGTGCCCAGTAAGAAATATCACAAAAACACAGGCCAAG HS_haplotype2 TGCATCCAGCAGACCAGAAGTAAGTGCCCAGTAAGAAATATCACAAAAACACAGGCCAAG ************************************************************ HS_haplotype1 GGCATGCTCTACGAAGAAATATCGGGCGAAATATAAGGAATTTCAGCCTTACAGGGTGGC HS_assemblymutate GGCATGCTCTACGAAGAAATATCGGGCGAAATATAAGGAATTTCAGCCTTACAGGGTGGC HS_haplotype2 GGCATGCTCTACGAAGAAATATCGGGCGAAATATAAGGAATTTCAGCCTTACAGGGTGGC ************************************************************ HS_haplotype1 CCTCTTAATATTGTTTTAGAGTACGTCTCCCAGTAGAGACACTGCCTTCTTTGTCCGCGA HS_assemblymutate CCTCTTAATATTGTTTTAGAGTACGTCTCCCAGTAGAGACACTGCCTTCTTTGTCCGCGA HS_haplotype2 CCTCTTAATATTGTTTTAGAGTACGTCTCCCAGTAGAGACACTGCCTTCTTTGTCCGCGA ************************************************************ HS_haplotype1 AACCCAGGTTTGCAAT HS_assemblymutate AACCCAGGTTTGCAAT HS_haplotype2 AACCCAGGTTTGCAAT ****************