MicroScope - Tutorial   »   MaGe   »   Gene Annotation Editor   »   Genomes/Project


This section indicates the best BLAST hits for the current Genomic Object with Genomic Objects from other PkGDB genomes that are linked to the current annotation Project.

These other Genomic Objects having been automatically (re-)annotated using the MaGe platform, and maybe even been manually annotated/curated by MaGe users, can serve as informative references for your own annotations.

How to read the result table ?

  • Label: Label of the protein. If you click on the label, you access the Gene annotation window for that Genomic Object.
  • Organism: Organism name. If you click on the name, you access the organism’s sequences on the NCBI website
  • Gene: Gene name of the protein
  • Evidence:
  • Gene: Gene name of the genomic object
  • Product: Product description of the protein
  • maxLrap : see BLAST results
  • minLrap : see BLAST results
  • Ident%: Percentage of identity between the studied protein and the database protein
  • Eval: Evalue of the BLAST result
  • OrderQ : see BLAST results
  • OrderB :see BLAST results
  • BeginQ: Start of the alignment for the studied protein
  • EndQ: End of the alignment for the studied protein
  • LengthQ: Length the studied protein
  • BeginB: Start of the alignment for the database protein
  • EndB: End of the alignment for the database protein
  • LengthB: Length of the database protein