MaGe - MicroScope - Web Interface System & Specialized Databases for (re)Annotation and Analysis of Microbial Genomes

Acinetobacter baumannii AYE - plasmid p3ABAUR.1 Public

(sequence length : 94413 bases)

Synteny map

PkGDB

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RefSeq

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Genomic Objects^[108]

Label	Type	Gene	Begin	End	Length	Frame	Product	Matrix	Evidence	AMIGene Status	Mutation	GC Content	GC3 Content	CAI	Mw (Da)	pI
p3ABAYE0002	CDS		746	1918	1173	+2	putative replication protein	3	validated/Curated	no	no	0.3188	0.2379	0.58	45683.16	6.26
p3ABAYE_ISAba5_1	IS	ISAba5	1996	3035	1040	-1	Insertion Sequence ISAba5, IS5 family		automatic/finished		no
p3ABAYE0003	CDS		2049	2267	219	-2	transposase	3	validated/finished	no	pseudo	0.4292	0.4247	0.46	8323.52	10.77
p3ABAYE0004	CDS		2361	2981	621	-2	transposase of ISAba5	3	validated/finished	no	pseudo	0.4137	0.3377	0.43	26268.22	9.75
p3ABAYE0005	CDS		3147	5852	2706	-2	putative UvrABC system protein A (UvrA) (Excinuclease ABC subunit A)	3	validated/Curated	no	no	0.4117	0.2228	0.49	98539.49	6.25
p3ABAYE0006	CDS		5857	6045	189	-1	transposase	3	validated/finished	no	pseudo	0.3333	0.3333	0.59	7409.36	10.10
p3ABAYE0007	CDS		6166	7080	915	-1	transposase of ISAba5 element	3	validated/finished	no	pseudo	0.3978	0.3311	0.50	34136.93	7.79
p3ABAYE0008	CDS		7174	8151	978	-1	putative dehydrogenase (Zinc-binding alcohol dehydrogenase, NADPH quinone oxidoreductase, oxidoreductase)	3	validated/Curated	no	no	0.3824	0.2147	0.52	34956.73	5.56
p3ABAYE0009	CDS		8288	9220	933	+2	transposase	3	validated/finished	no	no	0.4062	0.3376	0.42	35941.07	9.97
p3ABAYE0010	CDS		9765	9986	222	-2	conserved hypothetical protein	3	validated/Curated	no	no	0.3333	0.3243	0.54	8523.62	5.78
p3ABAYE0011	CDS		10052	10432	381	+2	hypothetical protein	3	validated/Curated	no	no	0.2940	0.2283	0.51	14777.66	4.87
p3ABAYE0012	CDS		10964	12163	1200	-3	putative integrase	3	validated/Curated	no	no	0.3775	0.3500	0.49	46672.99	9.34
p3ABAYE0013	CDS		12463	12894	432	+1	conserved hypothetical protein; putative signal peptide	3	validated/Curated	no	no	0.3287	0.2431	0.50	16288.16	9.76
p3ABAYE0014	CDS		13309	13947	639	-1	putative glutathione S-transferase family protein	3	validated/Curated	no	no	0.3818	0.3146	0.56	24377.02	5.78
p3ABAYE0015	CDS		13963	14982	1020	-1	putative dehydrogenase, with NAD(P)-binding and GroES-like domains	3	validated/Curated	no	no	0.4294	0.3471	0.55	37104.00	7.11
p3ABAYE0016	CDS		15127	15732	606	+1	putative transcriptional regulator (TetR family)	1	validated/Curated	no	no	0.3894	0.3267	0.52	22772.20	6.08
p3ABAYE0017	CDS		15840	16070	231	+3	hypothetical protein; putative membrane protein	1	validated/Curated	no	no	0.3636	0.3636	0.44	8580.30	10.00
p3ABAYE0018	CDS		16154	17281	1128	-3	putative N-Ethylmaleimide reductase (NemA)	1	validated/Curated	no	no	0.4433	0.2899	0.49	41208.86	5.62
p3ABAYE0019	CDS		17485	18198	714	-1	conserved hypothetical protein; putative ThiJ/PfpI family protein	3	validated/Curated	no	no	0.4314	0.2941	0.57	25424.70	4.98
p3ABAYE0020	CDS		18248	19405	1158	-3	putative iron-containing alcohol dehydrogenase	1	validated/Curated	no	no	0.4275	0.3368	0.47	42556.90	5.30
p3ABAYE0021	CDS		19602	19799	198	+3	fragment of transposase, IS3 family	3	validated/finished	no	partial	0.3636	0.3636	0.43	7460.52	10.22
p3ABAYE0022	CDS		20005	20307	303	-1	conserved hypothetical protein	2	validated/Curated	no	no	0.4488	0.2673	0.60	10741.06	4.80
p3ABAYE0023	CDS		20642	21478	837	-3	putative esterase	3	validated/Curated	no	no	0.3847	0.3011	0.51	31562.68	5.41
p3ABAYE0024	CDS	adhC	21701	22813	1113	-3	Alcohol dehydrogenase class 3 (Alcohol dehydrogenase class III) (S-(hydroxymethyl)glutathione dehydrogenase) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH)	2	validated/finished	no	no	0.4465	0.3100	0.60	39332.24	5.81
p3ABAYE0025	CDS		22835	23110	276	-3	conserved hypothetical protein	3	validated/Curated	no	no	0.3659	0.3261	0.52	10290.61	7.96
p3ABAYE0026	fCDS		23356	23559	204	+1	fragment of transposase, IS3 family (part 1)	3	validated/finished	no	pseudo	0.4069	0.3382	0.42	7983.02	11.18
p3ABAYE0027	fCDS		23486	23626	141	+2	fragment of transposase, IS3 family (part 2)	3	validated/finished	no	pseudo	0.3972	0.3617	0.47	4932.34	3.71
p3ABAYE0028	CDS		23888	24904	1017	+2	putative HTH-type transcriptional regulator (AraC family)	3	validated/Curated	no	no	0.3324	0.2596	0.58	38965.84	9.04
p3ABAYE0029	CDS		25020	26258	1239	+3	creatinase (Creatine amidinohydrolase)	3	validated/Curated	no	no	0.3874	0.2784	0.59	46455.06	5.37
p3ABAYE0030	CDS		26315	27607	1293	+2	putative metabolite MFS transporter	3	validated/Curated	no	no	0.3697	0.2784	0.52	47558.32	9.41
p3ABAYE0031	CDS		27620	28534	915	+2	putative membrane protein	3	validated/Curated	no	no	0.3683	0.2721	0.47	32858.76	9.23
p3ABAYE0032	fCDS		28730	28909	180	+2	fragment of transposase, IS5 family (part 1)	3	validated/finished	no	pseudo	0.3667	0.3000	0.67	7154.00	9.10
p3ABAYE0033	fCDS		28945	29133	189	+1	fragment of transposase, IS5 family (part 2)	1	validated/finished	no	pseudo	0.4762	0.5556	0.37	7039.94	7.87
p3ABAYE0034	fCDS		29130	29276	147	+3	fragment of transposase, IS5 family (part 3)	3	validated/finished	no	pseudo	0.3333	0.3061	0.49	5654.28	9.11
p3ABAYE0035	CDS		29906	30901	996	+2	putative alcohol dehydrogenase, zinc-containing	1	validated/Curated	no	no	0.4518	0.2922	0.55	35086.63	4.98
p3ABAYE0036	CDS		30837	31907	1071	+3	putative alcohol dehydrogenase, zinc-containing	3	validated/Curated	no	no	0.4370	0.3361	0.42	38905.88	6.64
p3ABAYE0037	CDS		31958	32920	963	-3	putative HTH-type transcriptional regulator (LysR family)	1	validated/Curated	no	no	0.4361	0.3769	0.39	36650.02	8.90
p3ABAYE0038	CDS		32966	33733	768	+2	putative oxidoreductase	3	validated/Curated	no	no	0.3802	0.2031	0.58	27509.44	6.01
p3ABAYE0039	CDS		33807	34805	999	+3	putative alcohol dehydrogenase, zinc-containing	3	validated/Curated	no	no	0.3734	0.2793	0.53	36631.32	5.95
p3ABAYE0040	CDS		34826	35110	285	+2	conserved hypothetical protein; putative antibiotic monooxygenase	3	validated/Curated	no	no	0.3123	0.2842	0.45	10952.06	4.53
p3ABAYE0041	CDS		35362	35511	150	+1	fragment of transposase, IS3 family	1	validated/finished	no	partial	0.3867	0.3200	0.59	5676.25	4.48
p3ABAYE0042	CDS		35528	35656	129	+2	hypothetical protein	3	validated/Curated	no	no	0.3876	0.3488	0.42	4677.35	9.82
p3ABAYE0043	CDS		35828	36394	567	+2	conserved hypothetical protein; putative signal peptide	3	validated/Curated	no	no	0.3422	0.1905	0.58	21036.76	4.74
p3ABAYE0044	CDS		36526	37038	513	+1	conserved hypothetical protein	3	validated/Curated	no	no	0.3041	0.1871	0.57	19843.78	4.62
p3ABAYE0045	CDS		37237	38148	912	+1	hypothetical protein	3	validated/Curated	no	no	0.3235	0.2336	0.49	34301.52	5.25
p3ABAYE0046	CDS		38405	38650	246	+2	transcriptional repressor, antitoxin for RelE-like (RelB-like)	3	validated/Curated	no	no	0.3659	0.2561	0.64	9264.31	4.57
p3ABAYE0047	CDS		38640	38933	294	+3	reversible inhibitor of translation, co-repressor of relB operon transcription (RelE-like)	3	validated/Curated	no	no	0.3810	0.3673	0.37	11317.01	9.83
p3ABAYE0049	CDS		40251	40559	309	+3	conserved hypothetical protein	3	validated/Curated	no	no	0.4175	0.3495	0.43	11742.18	8.83
p3ABAYE0050	CDS		40600	40902	303	+1	putative HTH-type transcriptional regulator (Cro family)	3	validated/Curated	no	no	0.3960	0.2970	0.55	11205.56	6.34
p3ABAYE0051	CDS		40895	41104	210	+2	hypothetical protein	3	validated/Curated	no	no	0.2667	0.2714	0.54	8195.12	5.15
p3ABAYE0052	CDS		41214	41441	228	-2	conserved hypothetical protein	3	validated/Curated	no	no	0.2500	0.2105	0.56	8970.97	8.85
p3ABAYE0053	CDS		41715	41864	150	-2	hypothetical protein	3	validated/Curated	no	no	0.2733	0.2800	0.56	6003.89	9.92
p3ABAYE0054	CDS		42250	42561	312	-1	putative HTH-type transcriptional regulator (Cro family)	3	validated/Curated	no	no	0.4135	0.3942	0.51	11591.81	4.96
p3ABAYE0055	CDS		42503	42859	357	-3	conserved hypothetical protein	1	validated/Curated	no	no	0.4230	0.3782	0.44	13622.04	6.14
p3ABAYE0056	CDS		42904	43035	132	-1	hypothetical protein	3	validated/Curated	no	no	0.4242	0.3864	0.31	4990.61	10.38
p3ABAYE0057	CDS		43417	44100	684	+1	hypothetical protein; putative membrane protein	3	validated/Curated	no	no	0.2866	0.2105	0.49	26360.48	4.98
p3ABAYE0058	CDS		44227	44394	168	+1	hypothetical protein	3	validated/Curated	no	no	0.3750	0.2679	0.42	6240.00	8.76
p3ABAYE0059	CDS		44354	44833	480	+2	fragment of transposase, IS3 family	1	validated/finished	no	partial	0.4000	0.3250	0.51	18150.93	6.48
p3ABAYE0060	CDS		45076	45396	321	+1	putative prevent-host-death protein	3	validated/Curated	no	partial	0.3645	0.2710	0.53	12162.56	6.94
p3ABAYE0061	CDS		45667	47622	1956	-1	conserved hypothetical protein	3	validated/Curated	no	no	0.2919	0.1917	0.54	74708.23	5.21
p3ABAYE0062	fCDS		47714	48391	678	-3	fragment of transposase (part 2)	3	validated/Curated	no	pseudo	0.4233	0.3717	0.44	26046.78	10.00
p3ABAYE0063	fCDS		48393	48602	210	-2	fragment of transposase (part 1)	1	validated/Curated	no	pseudo	0.4333	0.3714	0.36	8217.27	10.22
p3ABAYE0064	CDS		48599	48883	285	-3	putative HTH-type transcriptional regulator, transposon related ORF	3	validated/Curated	no	no	0.4316	0.4000	0.45	10837.06	9.52
p3ABAYE0065	CDS		49045	53784	4740	-1	putative DNA helicase	3	validated/Curated	no	no	0.3489	0.2627	0.53	181158.96	5.72
p3ABAYE0066	CDS		53839	55878	2040	-1	putative ATP-dependent Lon protease	1	validated/Curated	no	no	0.4696	0.4765	0.42	75491.46	6.11
p3ABAYE0067	CDS		55908	58532	2625	-2	conserved hypothetical protein	1	validated/Curated	no	no	0.4579	0.4606	0.42	99523.46	5.38
p3ABAYE0068	CDS		58529	59899	1371	-3	hypothetical protein; putative membrane protein	3	validated/Curated	no	no	0.3435	0.2582	0.50	52398.24	5.49
p3ABAYE0069	CDS		59896	63429	3534	-1	putative restriction enzyme	3	validated/Curated	no	no	0.4168	0.3837	0.50	134386.26	5.13
p3ABAYE0070	CDS		63476	67165	3690	-3	putative ATPase-like protein	1	validated/Curated	no	no	0.4650	0.4927	0.44	139988.57	5.30
p3ABAYE0071	CDS		67197	67772	576	-2	conserved hypothetical protein	1	validated/Curated	no	no	0.4497	0.5000	0.38	21886.53	8.36
p3ABAYE0072	CDS		67789	68427	639	-1	conserved hypothetical protein	1	validated/Curated	no	no	0.4742	0.5070	0.38	25149.14	8.51
p3ABAYE0073	CDS		68411	69292	882	-3	conserved hypothetical protein	1	validated/Curated	no	no	0.4728	0.4864	0.40	33681.63	8.26
p3ABAYE0074	fCDS		69503	69739	237	+2	hypothetical protein (part 1)	1	validated/Curated	no	pseudo	0.4473	0.4430	0.32	8614.83	10.69
p3ABAYE0075	fCDS		69640	69831	192	+1	hypothetical protein (part 2)	3	validated/Curated	no	pseudo	0.4688	0.4531	0.34	6858.53	10.05
p3ABAYE0077	CDS		70073	70585	513	-3	fragment of putative cell filamentation-like protein	3	validated/Curated	no	partial	0.3177	0.2632	0.47	19880.81	5.37
p3ABAYE0078	CDS		70588	70773	186	-1	hypothetical protein	3	validated/Curated	no	no	0.3333	0.2581	0.52	6979.83	10.09
p3ABAYE0079	CDS		70940	71872	933	+2	transposase	3	validated/finished	no	no	0.4126	0.3408	0.42	35844.04	9.99
p3ABAYE0080	CDS		72003	72197	195	-2	conserved hypothetical protein	3	validated/Curated	no	no	0.3641	0.3846	0.54	7312.18	6.92
p3ABAYE0081	CDS		72293	72523	231	-3	fragment of putative bacteriophage protein	3	validated/Curated	no	no	0.3766	0.2208	0.46	8287.08	6.53
p3ABAYE0082	CDS		72568	73266	699	-1	putative phage-related protein	1	validated/Curated	no	no	0.4320	0.3476	0.43	24941.60	8.99
p3ABAYE0083	CDS		73377	73646	270	+3	putative phage-related protein; putative transcriptional regulator	3	validated/Curated	no	no	0.3593	0.2444	0.45	10158.20	7.95
p3ABAYE0084	CDS		73701	74030	330	+3	putative phage-related protein	3	validated/Curated	no	no	0.3818	0.3273	0.56	12571.21	8.68
p3ABAYE0085	CDS		74017	74304	288	+1	putative HTH-like transcriptional regulator, phage-related	2	validated/Curated	no	no	0.4549	0.2708	0.48	10564.92	9.59
p3ABAYE0087	CDS		74399	74698	300	+2	hypothetical protein	3	validated/Curated	no	no	0.3533	0.2600	0.43	10839.18	9.75
p3ABAYE0088	CDS		74742	74894	153	-2	hypothetical protein	2	validated/Curated	no	no	0.3856	0.3725	0.51	5389.08	6.27
p3ABAYE0089	CDS		75284	75460	177	-3	conserved hypothetical protein; putative signal peptide	3	validated/Curated	no	no	0.3842	0.2712	0.42	6021.74	9.62
p3ABAYE0090	CDS		75532	75855	324	-1	conserved hypothetical protein	3	validated/Curated	no	no	0.3241	0.2407	0.58	12526.16	6.08
p3ABAYE0092	CDS		76201	76734	534	-1	hypothetical protein	1	validated/Curated	no	no	0.4363	0.3315	0.49	20620.11	9.79
p3ABAYE0093	fCDS		76703	76960	258	-3	fragment of conserved hypothetical protein (part 2)	3	validated/Curated	no	pseudo	0.3798	0.3488	0.51	9879.87	4.91
p3ABAYE0094	fCDS		76957	77208	252	-1	fragment of conserved hypothetical protein (part 1)	3	validated/Curated	no	pseudo	0.3690	0.3690	0.44	9662.62	4.76
p3ABAYE0095	CDS		77317	77958	642	-1	conserved hypothetical protein	3	validated/Curated	no	no	0.4283	0.3645	0.57	24195.43	4.96
p3ABAYE0096	CDS		77927	78388	462	-3	conserved hypothetical protein	3	validated/Curated	no	no	0.3831	0.3182	0.47	18152.04	9.11
p3ABAYE0097	CDS		78449	78904	456	-3	hypothetical protein	3	validated/Curated	no	no	0.2873	0.2303	0.57	17812.06	5.08
p3ABAYE0098	CDS		79566	79844	279	-2	hypothetical protein	3	validated/Curated	no	no	0.3118	0.3118	0.38	10687.00	4.56
p3ABAYE0099	CDS		79995	80147	153	-2	hypothetical protein	3	validated/Curated	no	no	0.3137	0.2745	0.51	5618.24	5.16
p3ABAYE0100	CDS		80214	80708	495	-2	hypothetical protein	3	validated/Curated	no	no	0.3859	0.3818	0.57	19068.08	8.42
p3ABAYE0102	CDS		80900	83644	2745	-3	putative phage integrase	3	validated/Curated	no	no	0.3464	0.2852	0.50	108262.60	8.99
p3ABAYE0103	CDS		83693	84100	408	-3	hypothetical protein	3	validated/Curated	no	no	0.3627	0.3309	0.44	16109.81	9.61
p3ABAYE0104	CDS		84105	86456	2352	-2	hypothetical protein	3	validated/Curated	no	no	0.3444	0.2781	0.50	92374.54	8.99
p3ABAYE0105	CDS		86469	86933	465	-2	hypothetical protein	3	validated/Curated	no	no	0.2817	0.2839	0.46	18509.28	9.61
p3ABAYE0106	fCDS		87137	87610	474	+2	fragment of putative cell filamentation-like protein (part 1)	3	validated/Curated	no	pseudo	0.3819	0.3797	0.53	18019.95	8.55
p3ABAYE0107	fCDS		87757	87975	219	+1	fragment of putative cell filamentation-like protein (part 2)	3	validated/Curated	no	pseudo	0.3333	0.2192	0.55	8496.33	5.38
p3ABAYE0108	CDS		89486	89791	306	+2	putative HTH-like transcriptional regulator	2	validated/Curated	no	no	0.4346	0.3725	0.44	11571.96	9.98
p3ABAYE0109	fCDS		89791	90321	531	+1	fragment of conserved hypothetical protein (part 1)	1	validated/Curated	no	pseudo	0.4539	0.3898	0.38	19720.02	8.93
p3ABAYE0110	fCDS		90131	91042	912	+2	fragment of conserved hypothetical protein (part 2)	1	validated/Curated	no	pseudo	0.4320	0.3586	0.42	35010.80	8.14
p3ABAYE0111	CDS		91548	92402	855	-2	fragment of putative alkaline phosphatase	3	validated/Curated	no	partial	0.4047	0.2877	0.45	31341.52	9.06
p3ABAYE0112	CDS		92551	93450	900	-1	putative partitioning protein	3	validated/Curated	no	no	0.3178	0.2100	0.57	34584.30	7.27
p3ABAYE0113	CDS		93469	94245	777	-1	putative partitioning protein	3	validated/Curated	no	no	0.3282	0.1467	0.58	28142.22	5.41

Repeat Regions^[10]

Id	Begin	End	Comments
RPTR1472320	67	213	2 repeats
RPTR1472321	1985	3039	2 repeats
RPTR1472322	8230	9283	2 repeats
RPTR1472323	23333	23807	2 repeats
RPTR1472324	35297	35466	2 repeats
RPTR1472325	39722	40905	1 repeats
RPTR1472326	42204	43388	1 repeats
RPTR1472327	44373	44871	2 repeats
RPTR1472328	70886	71900	2 repeats
RPTR1472329	74840	74909	2 repeats