MaGe - MicroScope - Web Interface System & Specialized Databases for (re)Annotation and Analysis of Microbial Genomes

Acinetobacter baumannii AYE - chromosome ABAYE.1 Public

(sequence length : 3936291 bases)

Synteny map

PkGDB

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RefSeq

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Genomic Objects^[116]

Label	Type	Gene	Begin	End	Length	Frame	Product	Matrix	Evidence	AMIGene Status	Mutation	GC Content	GC3 Content	CAI	Mw (Da)	pI
ABAYE3540	CDS	pepA	3600184	3601632	1449	+1	aminopeptidase A/I	2	automatic/finished	no	no	0.4224	0.2961	0.61	52174.54	5.03
ABAYE3541	CDS	holC	3601625	3602032	408	+2	DNA polymerase III subunit chi	4	automatic/finished	no	no	0.3701	0.2647	0.52	15872.58	6.57
ABAYE3542	CDS		3602074	3602709	636	+1	conserved protein of unknown function	4	automatic/finished	no	no	0.3931	0.2358	0.64	24085.22	4.93
ABAYE3543	CDS		3602840	3603058	219	+2	conserved protein of unknown function	4	automatic/finished	no	no	0.4110	0.3836	0.52	8324.94	6.18
ABAYE3544	CDS	ribE	3603117	3603776	660	-2	Riboflavin synthase	1	automatic/finished	no	no	0.4136	0.3136	0.58	23965.26	5.27
ABAYE3545	CDS		3603819	3605111	1293	-2	DNA modification methylase	4	automatic/finished	no	no	0.4493	0.3666	0.53	48900.62	9.12
ABAYE3546	CDS	ribD	3605108	3606193	1086	-3	fused diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase	3	automatic/finished	no	no	0.4365	0.3204	0.50	39701.32	6.28
ABAYE3547	CDS	nrdR	3606209	3606667	459	-3	NrdR transcriptional repressor	1	automatic/finished	no	no	0.4575	0.3922	0.50	17807.72	8.36
ABAYE3548	CDS	amtB	3606826	3608223	1398	-1	ammonia/ammonium transporter	2	automatic/finished	no	no	0.4506	0.3155	0.64	47947.32	5.77
ABAYE3549	CDS	glnK	3608281	3608619	339	-1	nitrogen regulator GlnK	1	automatic/finished	no	no	0.4159	0.3009	0.58	12202.62	5.42
ABAYE3550	CDS		3608899	3609126	228	+1	conserved hypothetical protein	1	validated/finished	no	no	0.3158	0.2237	0.58	8716.82	5.86
ABAYE3551	CDS		3609192	3610049	858	+3	fragment of magnesium chelatase, competence related protein (ComM)	3	validated/finished	no	partial	0.4464	0.3112	0.45	30663.09	7.37
ABAYE3552	CDS		3610132	3611928	1797	+1	hypothetical protein	3	validated/finished	no	no	0.3350	0.2705	0.49	69547.38	7.24
ABAYE3553	CDS		3612223	3613710	1488	+1	putative sulfate transporter (MFS superfamily)	1	validated/finished	no	no	0.3945	0.2984	0.52	53076.66	5.74
ABAYE3554	CDS		3613725	3614075	351	+3	hypothetical protein	3	validated/finished	no	no	0.3960	0.2650	0.47	12732.14	6.08
ABAYE3556	CDS		3614111	3615400	1290	-3	transposase	5	validated/finished	no	no	0.5953	0.7953	0.27	50397.26	9.18
ABAYE3558	CDS	lspA	3615422	3615934	513	-3	prolipoprotein signal peptidase (SPase II)	5	validated/finished	no	no	0.4854	0.5322	0.38	18748.76	6.45
ABAYE3559	CDS		3615938	3616834	897	-3	putative heavy metal transport/detoxification protein	5	validated/finished	no	no	0.5719	0.6589	0.27	31408.12	6.10
ABAYE3560	CDS		3616915	3617337	423	+1	putative transcriptional regulator (MerR family)	5	validated/finished	no	no	0.5461	0.5816	0.33	16014.60	7.91
ABAYE3561	CDS		3617459	3617722	264	+2	fragment of conjugal transfer protein trbI	5	validated/finished	no	partial	0.5758	0.6364	0.34	9609.70	9.68
ABAYE3562	CDS		3617779	3618165	387	-1	hypothetical protein	5	validated/finished	no	no	0.6589	0.7054	0.27	13683.42	11.43
ABAYE3565	CDS		3618868	3619212	345	-1	conserved hypothetical protein	5	validated/finished	no	no	0.6232	0.8783	0.29	12683.88	4.86
ABAYE3566	CDS		3619260	3619403	144	+3	hypothetical protein	5	validated/finished	no	no	0.6736	0.7292	0.18	5508.36	12.18
ABAYE3567	CDS		3619628	3619846	219	+2	conserved hypothetical protein	5	validated/finished	no	no	0.6895	0.6849	0.24	7391.10	5.12
ABAYE3568	CDS	sulI	3620148	3620987	840	-2	Dihydropteroate synthase type-1 (Dihydropteroate synthase type I) (DHPS) (Dihydropteroate pyrophosphorylase type I)	5	validated/finished	no	no	0.6160	0.6926	0.27	33166.56	5.73
ABAYE3569	CDS	ebr	3620981	3621328	348	-3	ethidium bromide resistance protein (E1 protein)	5	validated/finished	no	no	0.5000	0.4914	0.31	12331.33	10.09
ABAYE3570	CDS	aadA1	3621492	3622283	792	-2	Aminoglycoside 3'-(9)-O-adenylyltransferase AADA1	5	validated/finished	no	no	0.5303	0.5492	0.38	29331.25	4.60
ABAYE3571	CDS		3622696	3623208	513	-1	putative GCN5-related N-acetyltransferase, OrfX	5	validated/finished	no	no	0.5646	0.5811	0.33	23890.49	9.50
ABAYE3572	CDS		3623234	3623746	513	-3	putative GCN5-related N-acetyltransferase, OrfX	5	validated/finished	no	no	0.5545	0.5455	0.34	23857.31	10.18
ABAYE3573	CDS	aacC1	3623865	3624398	534	-2	Gentamicin 3'-acetyltransferase (Gentamicin acetyltransferase I) (Aminoglycoside N(3')-acetyltransferase I) (AAC(3)-I)	5	validated/finished	no	no	0.5356	0.5843	0.40	19387.23	5.77
ABAYE3574	CDS		3624352	3624570	219	-1	fragment of streptothricin acetyl-transferase (Sat)	5	validated/finished	no	partial	0.5434	0.5753	0.37	8117.90	9.80
ABAYE3575	CDS	int	3624500	3625513	1014	+2	Integrase/recombinase (E2 protein)	5	validated/finished	no	no	0.6105	0.7189	0.28	38356.78	10.25
ABAYE_IS26_1	IS	IS26	3626162	3626981	820	-1	Insertion Sequence IS26, IS6 family		automatic/finished		no
ABAYE3576	CDS	tnpA	3626214	3626936	723	-2	transposase of IS26, IS6 family	5	validated/finished	no	no	0.5325	0.6307	0.34	28631.20	10.03
ABAYE3578	CDS		3627048	3627863	816	+3	Aminoglycoside 3'-phosphotransferase AphA1-IAB	5	validated/finished	no	no	0.4412	0.4007	0.43	30928.94	5.37
ABAYE_IS15DI_1	IS	IS15DI	3628236	3628410	175	-1	fragment of Insertion Sequence IS15DI, IS6 family		automatic/finished		partial
ABAYE_IS15DI_2	IS	IS15DI	3628411	3629230	820	-1	Insertion Sequence IS15DI, IS6 family		automatic/finished		no
ABAYE3580	CDS		3628463	3629185	723	-3	transposase of IS15DI, IS6 family	5	validated/finished	no	no	0.5284	0.6266	0.34	28688.24	10.03
ABAYE3581	CDS	tnpR	3629179	3629838	660	-1	Resolvase	5	validated/finished	no	no	0.5955	0.6591	0.25	23841.60	9.77
ABAYE3582	CDS		3629949	3632708	2760	-2	Transposase	5	validated/inProgress	no	no	0.5208	0.5187	0.31	129168.54	9.13
ABAYE_IS26_2	IS	IS26	3632799	3633618	820	+1	Insertion Sequence IS26, IS6 family		automatic/finished		no
ABAYE3583_1	CDS	tnpA	3632844	3633566	723	+3	transposase of IS26, IS6 family		validated/finished		no
ABAYE3584	CDS		3633817	3636366	2550	+1	Transposase of Tn1	5	validated/finished	no	no	0.5184	0.5294	0.31	95130.48	8.88
ABAYE3587	CDS	cat	3637354	3638013	660	+1	Chloramphenicol acetyltransferase (CAT)	5	validated/finished	no	no	0.4470	0.5182	0.42	25662.21	5.91
ABAYE3588	CDS		3638214	3638594	381	-2	putative GCN5-related N-acetyltransferase	5	validated/finished	no	no	0.4829	0.5354	0.28	14127.80	9.48
ABAYE3589	CDS		3638799	3639014	216	+3	hypothetical protein	5	validated/finished	no	no	0.6667	0.7222	0.33	7750.61	10.50
ABAYE3590	CDS		3639024	3639323	300	+3	hypothetical protein	5	validated/finished	no	no	0.6833	0.6700	0.26	10509.19	5.64
ABAYE3591	CDS		3639327	3639596	270	+3	conserved hypothetical protein	5	validated/finished	no	no	0.6481	0.6333	0.23	9054.95	5.38
ABAYE3592	CDS		3639615	3639911	297	+3	hypothetical protein	5	validated/finished	no	no	0.6296	0.5859	0.28	10192.08	5.83
ABAYE3593	CDS		3640398	3640805	408	+3	conserved hypothetical protein; putative Isochorismatase hydrolase	5	validated/finished	no	no	0.6225	0.6765	0.26	14680.03	5.28
ABAYE3596	CDS		3640943	3641827	885	+2	conserved hypothetical protein; putative membrane protein (PecM-like)	5	validated/finished	no	no	0.5898	0.6780	0.28	31147.34	11.29
ABAYE3597	CDS	tetA	3641859	3643133	1275	-2	Tetracycline resistance protein, class A (TETA(A))	5	validated/finished	no	no	0.6322	0.7459	0.26	45155.42	9.94
ABAYE3598	CDS	tetR	3643137	3643814	678	+3	tetracycline repressor protein	5	validated/finished	no	no	0.6268	0.7389	0.29	24314.52	5.28
ABAYE3599	CDS		3643846	3644088	243	-1	putative Relaxase/helicase	5	validated/finished	no	no	0.7202	0.8519	0.17	8874.75	10.34
ABAYE3601	CDS	merR	3644226	3644681	456	-2	Mercuric resistance operon regulatory protein	5	validated/finished	no	no	0.6096	0.7368	0.23	16528.31	8.14
ABAYE3602	fCDS		3644717	3645025	309	-3	fragment of conserved hypothetical protein (part 2)	5	validated/finished	no	pseudo	0.6149	0.6116	0.25	11494.48	10.03
ABAYE3603	fCDS		3645119	3645436	318	-3	fragment of conserved hypothetical protein (part 1)	5	validated/finished	no	pseudo	0.6101	0.5660	0.31	10721.37	5.90
ABAYE3604	CDS	merC	3645437	3645862	426	+2	Mercury resistance inner membrane protein	5	validated/finished	no	no	0.6197	0.7254	0.28	14794.93	9.20
ABAYE3605	CDS	merA	3645901	3647586	1686	+1	Mercuric reductase (Hg(II) reductase)	5	validated/finished	no	no	0.6512	0.7972	0.28	58764.73	5.25
ABAYE3606	CDS	merD	3647571	3647969	399	+3	HTH-type transcriptional regulator (Mercuric resistance protein merD)	5	validated/finished	no	no	0.6642	0.7519	0.24	14468.26	9.87
ABAYE3607	CDS	merE	3647966	3648202	237	+2	mercuric resistance protein	5	validated/finished	no	no	0.6245	0.7848	0.23	8279.48	8.84
ABAYE3610	CDS		3649863	3650006	144	+3	conserved hypothetical protein	5	validated/finished	no	no	0.5625	0.7708	0.28	5475.11	4.51
ABAYE3611	CDS		3650097	3650315	219	+3	conserved hypothetical protein	5	validated/finished	no	no	0.6895	0.6849	0.24	7391.10	5.12
ABAYE3612	CDS	sulI	3650617	3651456	840	-1	Dihydropteroate synthase type-1 (Dihydropteroate synthase type I) (DHPS) (Dihydropteroate pyrophosphorylase type I)	5	validated/finished	no	no	0.6170	0.6926	0.27	33150.56	5.73
ABAYE3613	CDS	ebr	3651450	3651797	348	-2	ethidium bromide resistance protein (E1 protein)	5	validated/finished	no	no	0.5000	0.4914	0.31	12331.33	10.09
ABAYE3614	CDS	dfrA10	3651834	3652397	564	-2	Dihydrofolate reductase type A10 (Dihydrofolate reductase type X) (DHFRX)	5	validated/finished	no	no	0.3546	0.3191	0.48	21218.66	5.79
ABAYE3615	CDS		3652779	3654320	1542	-2	putative transposase	5	validated/finished	no	no	0.5545	0.6109	0.33	58495.84	9.56
ABAYE3616	CDS		3654725	3655564	840	-3	Dihydropteroate synthase type-1 (Dihydropteroate synthase type I) (DHPS) (Dihydropteroate pyrophosphorylase type I)	5	validated/finished	no	no	0.6160	0.6926	0.27	33166.56	5.73
ABAYE3617	CDS	ebr	3655558	3655905	348	-1	ethidium bromide resistance protein (E1 protein)	5	validated/finished	no	no	0.5000	0.4914	0.31	12331.33	10.09
ABAYE3618	CDS	aadA1	3656069	3656899	831	-3	Aminoglycoside 3'-(9)-O-adenylyltransferase AADA1	5	validated/finished	no	no	0.5223	0.5451	0.39	30753.96	4.74
ABAYE3619	CDS	oxa-10	3656877	3657677	801	-2	Beta-lactamase OXA-10 precursor	4	validated/finished	no	no	0.4195	0.4007	0.42	29505.58	7.81
ABAYE3620	CDS	cmlA	3657942	3659201	1260	-2	Chloramphenicol resistance protein	5	validated/finished	no	no	0.5528	0.5826	0.30	45982.55	9.50
ABAYE3621	CDS	arr-2	3659522	3660013	492	-3	Rifampin ADP-ribosylating transferase ARR-2	5	validated/finished	no	no	0.4553	0.4695	0.41	18321.31	5.47
ABAYE3622	CDS	aadB	3660059	3660592	534	-3	2''-aminoglycoside nucleotidyltransferase aadB	5	validated/finished	no	no	0.5768	0.6292	0.34	19872.72	4.49
ABAYE3623	CDS	veb-1	3660737	3661636	900	-3	Extended spectrum beta-lactamase VEB-1	4	validated/finished	no	no	0.3133	0.2800	0.48	33733.40	8.43
ABAYE_IS10A_3	IS	IS10A	3661705	3663033	1329	+1	Insertion Sequence IS10A, IS4 family		automatic/finished		no
ABAYE3624	CDS		3661770	3663020	1251	+3	transposase of IS10A, IS4 family	3	automatic/finished	no	no	0.4804	0.5180	0.41	47717.54	9.83
ABAYE3625	CDS		3663030	3663215	186	-2	fragment of aminoglycoside adenylyltransferase	5	validated/finished	no	partial	0.5323	0.5806	0.41	6936.66	9.88
ABAYE3627	CDS		3663145	3663798	654	+1	GroEL/integrase fusion protein	3	validated/finished	no	no	0.6330	0.7936	0.33	23382.99	7.20
ABAYE3629	CDS		3665606	3667456	1851	+2	putative ATP-dependent DNA helicase	5	validated/finished	no	no	0.5662	0.5900	0.34	68169.14	7.42
ABAYE3630	CDS		3667408	3667986	579	-1	putative Aminoglycoside 6'-N-acetyltransferase	5	validated/finished	no	no	0.5250	0.5855	0.34	22064.58	4.61
ABAYE3631	CDS		3667998	3668252	255	-2	fragment of streptothricin acetyl-transferase (Sat)	5	validated/finished	no	partial	0.5020	0.5412	0.38	9471.58	10.21
ABAYE3633	CDS		3668182	3668835	654	+1	GroEL/integrase fusion protein	4	validated/finished	no	no	0.6330	0.7936	0.33	23382.99	7.20
ABAYE3636	CDS		3670686	3671411	726	-2	putative transcriptional regulator (LysR family)	5	validated/finished	no	no	0.6116	0.6570	0.29	26179.15	10.44
ABAYE3637	CDS	tetA	3671432	3672607	1176	-3	Tetracycline resistance protein, class G (TETA(G))	5	validated/finished	no	no	0.5774	0.5995	0.31	40681.31	9.40
ABAYE3639	CDS	tetR	3672711	3673337	627	+3	Tetracycline repressor protein class G	5	validated/finished	no	no	0.5917	0.6890	0.29	23363.52	5.29
ABAYE3640	CDS		3673544	3674758	1215	-3	putative Chloramphenicol and florfenicol resistance protein (CmlA)	5	validated/finished	no	no	0.5868	0.6765	0.29	42402.54	9.18
ABAYE3641	CDS		3674975	3675871	897	-3	fragment of Dihydropteroate synthase type-1 (Dihydropteroate synthase type I) (DHPS) (Dihydropteroate pyrophosphorylase type I) (SulI)	5	validated/finished	no	partial	0.6423	0.7591	0.26	36060.65	6.29
ABAYE3642	CDS	ebr	3675865	3676212	348	-1	ethidium bromide resistance protein (E1 protein)	5	validated/finished	no	no	0.5000	0.4914	0.31	12331.33	10.09
ABAYE3644	CDS	dhfrI	3676916	3677389	474	-3	Dihydrofolate reductase type 1 (Dihydrofolate reductase type I) (Trimethoprim resistance protein)	5	validated/finished	no	no	0.3966	0.3734	0.40	17542.32	6.13
ABAYE3645	CDS		3677386	3677616	231	-1	fragment of streptothricin acetyl-transferase (Sat)	5	validated/finished	no	partial	0.5195	0.5584	0.42	8612.46	9.64
ABAYE3646	CDS	int	3677546	3678559	1014	+2	Integrase/recombinase (E2 protein)	5	validated/finished	no	no	0.6124	0.7219	0.28	38320.75	10.17
ABAYE3647	CDS	strB	3678820	3679656	837	-1	Streptomycin 3''-kinase (Streptomycin 3''- phosphotransferase) (SPH)	5	validated/finished	no	no	0.5579	0.5780	0.34	31215.33	5.02
ABAYE3648	CDS	aphE	3679656	3680492	837	-2	Streptomycin 3''-kinase (Streptomycin 3''- phosphotransferase) (Streptomycin 6-phosphotransferase) (Streptomycin 6-kinase)	5	validated/finished	no	no	0.5544	0.5340	0.34	30819.96	4.95
ABAYE3649	CDS		3680489	3680620	132	-3	fragment of Streptomycin 3''-adenylyltransferase	3	validated/finished	no	partial	0.4394	0.4318	0.44	5011.57	9.31
ABAYE3650	CDS		3680642	3681931	1290	-3	transposase	5	validated/finished	no	no	0.5953	0.7953	0.27	50397.26	9.18
ABAYE3651	CDS	lspA	3681953	3682465	513	-3	prolipoprotein signal peptidase (SPase II)	5	validated/finished	no	no	0.4815	0.5263	0.38	18748.76	6.45
ABAYE3653	CDS		3682469	3683365	897	-3	putative Heavy metal transport/detoxification protein	5	validated/finished	no	no	0.5719	0.6589	0.27	31408.12	6.10
ABAYE3654	CDS		3683446	3683868	423	+1	putative transcriptional regulator (MerR family)	5	validated/finished	no	no	0.5414	0.5745	0.33	16013.66	8.81
ABAYE3655	CDS		3683961	3684488	528	+3	conserved hypothetical protein; putative universal stress protein	3	validated/finished	no	no	0.3883	0.3011	0.49	19372.57	8.05
ABAYE3656	CDS	arsC	3684625	3685125	501	+1	arsenate reductase (Arsenical pump modifier)	2	validated/finished	no	no	0.3553	0.2515	0.56	19051.22	4.86
ABAYE3657	CDS	arsR	3685171	3685503	333	+1	arsenical resistence operon repressor	3	validated/finished	no	no	0.3784	0.3514	0.41	12693.02	5.29
ABAYE3658	CDS	arsC	3685510	3685983	474	+1	Protein arsC (Arsenate reductase) (Arsenical pump modifier) (Low molecular weight protein-tyrosine-phosphatase)	4	validated/finished	no	no	0.4177	0.3101	0.56	17253.98	5.39
ABAYE3659	CDS	arsB	3685949	3687034	1086	+2	arsenite efflux transporter	4	validated/finished	no	no	0.3978	0.4199	0.51	40218.78	9.23
ABAYE3660	CDS	arsH	3687040	3687744	705	+1	arsenical resistance protein	3	validated/finished	no	no	0.4355	0.3872	0.50	26784.74	6.61
ABAYE3661	CDS	trxB	3687762	3688715	954	+3	thioredoxin reductase 1	1	validated/finished	no	no	0.4214	0.2736	0.63	33841.66	4.96
ABAYE3662	CDS		3688763	3689884	1122	+2	putative monooxygenase	3	validated/finished	no	no	0.4234	0.2914	0.46	41654.73	6.23
ABAYE3663	CDS		3689988	3691451	1464	-2	conserved hypothetical protein	3	validated/finished	no	no	0.3559	0.2643	0.45	56605.06	8.85
ABAYE3664	CDS		3691429	3692544	1116	-1	conserved hypothetical protein	3	validated/finished	no	no	0.3808	0.3091	0.49	42891.76	8.64
ABAYE3665	CDS		3692574	3693497	924	-2	putative transposition helper protein	3	validated/finished	no	no	0.3755	0.3539	0.42	35138.60	7.08
ABAYE3666	CDS		3693499	3695409	1911	-1	putative transposase	3	validated/finished	no	no	0.3883	0.3281	0.48	73315.46	8.03
ABAYE3667	CDS		3695410	3696168	759	-1	conserved hypothetical protein	3	validated/finished	no	no	0.3518	0.3083	0.53	29483.64	8.26
ABAYE3668	CDS		3696245	3696928	684	+2	fragment of magnesium chelatase, competence related protein (ComM)	1	validated/finished	no	partial	0.4196	0.2632	0.52	25684.33	6.64
ABAYE3669	CDS		3696965	3698383	1419	-3	conserved hypothetical protein	3	validated/finished	no	no	0.3996	0.3192	0.49	54217.90	8.70
ABAYE3670	CDS		3698471	3699271	801	+2	putative aldolase class II	4	validated/finished	no	no	0.4370	0.4045	0.61	29743.76	5.84
ABAYE3671	CDS		3699287	3700165	879	+2	putative Dihydrodipicolinate synthase (DapA)	1	validated/finished	no	no	0.4039	0.3242	0.53	32139.88	5.13

Repeat Regions^[19]

Id	Begin	End	Comments
RPTR1387116	3612090	3613677	1 repeats
RPTR1387117	3614053	3617424	1 repeats
RPTR1387118	3619450	3622293	4 repeats
RPTR1387119	3622680	3623783	2 repeats
RPTR1387120	3624341	3625670	4 repeats
RPTR1387121	3626161	3626981	2 repeats
RPTR1387122	3628235	3629236	4 repeats
RPTR1387123	3632793	3633619	2 repeats
RPTR1387124	3648494	3648634	1 repeats
RPTR1387125	3649544	3649684	1 repeats
RPTR1387126	3649919	3651829	3 repeats
RPTR1387127	3654701	3656870	4 repeats
RPTR1387128	3660008	3660077	2 repeats
RPTR1387129	3661667	3665725	8 repeats
RPTR1387130	3668061	3669104	3 repeats
RPTR1387131	3669110	3670838	1 repeats
RPTR1387132	3675343	3676342	3 repeats
RPTR1387133	3677405	3678716	4 repeats
RPTR1387134	3680584	3683956	1 repeats