MaGe - MicroScope - Web Interface System & Specialized Databases for (re)Annotation and Analysis of Microbial Genomes

Genome Browser interface provides an user-friendly way to visualize and explore a replicon content (cartographic map of the genome), together with the similarity results (synteny maps) obtained with other bacterial genomes available in our PkGDB database (i.e, (re)annotation of bacterial genomes or complete proteome downloaded from the RefSeq/WGS sections). Artemis tool can be launched at this level to examine more precisely the nucleotidic/proteic sequences (a useful interface to correct translational start codon positions if necessary). For genomic objects drawn in part of the chromosome visualized in the cartographic map, additional information is listed in a table.

Label	Type	Gene	Begin	End	Length	Frame	Product	Matrix	Evidence	AMIGene Status	Mutation	GC Content	GC3 Content	CAI	Mw (Da)	pI
ABAYE2698	CDS		2735722	2740029	4308	-1	putative bacteriophage protein	3	validated/finished	no	no	0.4113	0.2820	0.51	155515.38	8.35
ABAYE2699	CDS		2740157	2740420	264	-3	hypothetical protein	4	validated/finished	no	no	0.3523	0.2045	0.49	9656.00	8.87
ABAYE2700	CDS		2740422	2741111	690	-2	hypothetical protein; putative exported protein	4	validated/finished	no	no	0.3449	0.2478	0.55	25114.75	9.17
ABAYE2701	CDS		2741207	2741665	459	-3	conserved hypothetical protein from bacteriophage	5	validated/finished	no	no	0.3638	0.2549	0.49	17459.94	5.32
ABAYE2702	CDS		2741674	2741988	315	-1	hypothetical protein	4	validated/finished	no	no	0.3873	0.3048	0.51	11679.12	8.61
ABAYE2703	CDS		2742219	2742548	330	-2	hypothetical protein	4	validated/finished	no	no	0.4121	0.4364	0.44	12500.77	6.46
ABAYE2704	CDS		2742476	2742991	516	-3	conserved hypothetical protein	5	validated/finished	no	no	0.4186	0.4012	0.50	19260.27	9.19
ABAYE2705	CDS		2743061	2743978	918	-3	conserved hypothetical protein	4	validated/finished	no	no	0.4325	0.3693	0.51	33139.26	4.86
ABAYE2706	CDS		2744074	2745171	1098	-1	conserved hypothetical protein	3	validated/finished	no	no	0.4226	0.3169	0.51	39777.79	4.82
ABAYE2707	CDS		2745171	2745521	351	-2	conserved hypothetical protein	4	validated/finished	no	no	0.4330	0.3846	0.50	12591.72	4.79
ABAYE2708	CDS		2745617	2745835	219	-3	conserved hypothetical protein	5	validated/finished	no	no	0.3562	0.2740	0.47	8214.09	5.26
ABAYE2709	CDS		2745837	2746280	444	-2	conserved hypothetical protein	1	validated/finished	no	no	0.4144	0.3514	0.52	16384.32	8.42
ABAYE2710	CDS		2746237	2746605	369	-1	conserved hypothetical protein	1	validated/finished	no	no	0.4173	0.3496	0.57	13259.38	8.15
ABAYE2711	CDS		2746577	2746984	408	-3	hypothetical protein	3	validated/finished	no	no	0.4020	0.3456	0.51	15546.99	4.72
ABAYE2712	CDS		2747038	2747685	648	-1	hypothetical protein	3	validated/finished	no	no	0.2762	0.1944	0.60	25156.44	5.87
ABAYE2713	CDS		2747723	2748091	369	-3	conserved hypothetical protein	1	validated/finished	no	no	0.4119	0.3740	0.54	13873.14	4.83
ABAYE2714	CDS		2748091	2748471	381	-1	conserved hypothetical protein	1	validated/finished	no	no	0.3911	0.3228	0.53	14316.96	6.82
ABAYE2715	CDS		2748475	2748831	357	-1	hypothetical protein	3	validated/finished	no	no	0.4174	0.2857	0.62	13000.02	4.59
ABAYE2716	CDS		2748876	2749826	951	-2	putative coat protein from bacteriophage	2	validated/finished	no	no	0.4469	0.3249	0.61	33439.30	4.82
ABAYE2717	CDS		2749840	2750595	756	-1	conserved hypothetical protein	4	validated/finished	no	no	0.4140	0.3413	0.58	27767.37	5.09
ABAYE2718	CDS		2750705	2751337	633	-3	hypothetical protein; putative exported protein	4	validated/finished	no	no	0.3886	0.2512	0.61	23738.70	5.52
ABAYE2719	CDS		2751379	2751603	225	-1	hypothetical protein	4	validated/finished	no	no	0.3333	0.2000	0.55	8121.88	6.11
ABAYE2720	CDS		2751616	2751852	237	-1	hypothetical protein	3	validated/finished	no	no	0.3882	0.1899	0.63	8410.25	5.59
ABAYE2721	CDS		2751951	2752379	429	-2	hypothetical protein; putative exported protein	4	validated/finished	no	no	0.3263	0.2028	0.57	15959.54	5.45
ABAYE2722	CDS		2752389	2753495	1107	-2	conserved hypothetical protein; putative Phage head morphogenesis protein	3	validated/finished	no	no	0.4038	0.3469	0.47	41830.36	8.83
ABAYE2723	CDS		2753505	2754851	1347	-2	conserved hypothetical protein	1	validated/finished	no	no	0.4328	0.3697	0.49	49791.16	4.78
ABAYE2724	CDS		2754891	2756204	1314	-2	conserved hypothetical protein; putative phage terminase	3	validated/finished	no	no	0.4132	0.3562	0.48	49378.81	9.04
ABAYE2725	CDS		2756143	2756658	516	-1	conserved hypothetical protein; putative phage-related protein	3	validated/finished	no	no	0.3798	0.3430	0.52	19816.95	6.95
ABAYE2726	CDS		2756717	2757358	642	-3	conserved hypothetical protein	1	validated/finished	no	no	0.4190	0.3458	0.50	24330.68	4.99
ABAYE2727	CDS		2757327	2757794	468	-2	conserved hypothetical protein	3	validated/finished	no	no	0.3718	0.2885	0.51	18377.41	9.85
ABAYE2728	CDS		2757848	2758126	279	-3	hypothetical protein	4	validated/finished	no	no	0.3226	0.3226	0.49	10694.62	4.46
ABAYE2729	CDS		2758417	2759634	1218	-1	conserved hypothetical protein from bacteriophage	3	validated/finished	no	no	0.3456	0.2241	0.53	45527.83	5.88
ABAYE2730	CDS		2759950	2760702	753	-1	conserved hypothetical protein	3	validated/finished	no	no	0.3732	0.2669	0.52	28186.60	9.22
ABAYE2731	CDS		2760713	2761117	405	-3	conserved hypothetical protein	5	validated/finished	no	no	0.4123	0.4148	0.37	15266.30	10.13
ABAYE2732	CDS		2761114	2761476	363	-1	conserved hypothetical protein	3	validated/finished	no	no	0.4187	0.3636	0.47	14152.62	9.69
ABAYE2733	CDS		2761427	2761606	180	-3	hypothetical protein	3	validated/finished	no	no	0.4167	0.3833	0.37	6734.25	9.06
ABAYE2734	CDS		2761603	2762001	399	-1	conserved hypothetical protein	5	validated/finished	no	no	0.4236	0.3684	0.47	15209.90	8.95
ABAYE2735	CDS		2761998	2762123	126	-2	hypothetical protein; putative exported protein	5	validated/finished	no	no	0.3810	0.3810	0.60	4706.44	10.00
ABAYE2736	CDS		2762120	2762845	726	-3	fragment of conserved hypothetical protein	3	validated/finished	no	partial	0.4050	0.3306	0.52	27606.94	5.09
ABAYE2737	CDS		2762842	2763291	450	-1	hypothetical protein	5	validated/finished	no	no	0.4200	0.3800	0.44	17291.84	5.09
ABAYE2738	CDS		2763284	2763592	309	-3	hypothetical protein	1	validated/finished	no	no	0.4078	0.4369	0.50	12001.16	5.71
ABAYE2739	CDS		2763725	2764033	309	-3	hypothetical protein	5	validated/finished	no	no	0.4110	0.3592	0.49	11637.74	6.09
ABAYE2740	CDS		2764030	2764206	177	-1	hypothetical protein	5	validated/finished	no	no	0.4407	0.5254	0.40	6960.96	9.99
ABAYE2741	CDS		2764203	2764460	258	-2	conserved hypothetical protein	4	validated/finished	no	no	0.3760	0.3953	0.48	9908.99	9.55
ABAYE2742	CDS		2764457	2765779	1323	-3	DNA helicase	4	automatic/finished	no	no	0.4157	0.3673	0.59	49458.72	6.23
ABAYE2743	CDS		2765773	2766603	831	-1	hypothetical protein	4	validated/finished	no	no	0.3670	0.3105	0.62	31757.66	6.44
ABAYE2744	CDS		2766600	2766758	159	-2	hypothetical protein	3	validated/finished	no	no	0.3648	0.2830	0.46	5784.58	9.30
ABAYE2745	CDS		2766799	2767074	276	-1	conserved hypothetical protein	2	validated/finished	no	no	0.4058	0.4022	0.52	10339.47	9.19
ABAYE2746	CDS		2767083	2767271	189	-2	conserved hypothetical protein	5	validated/finished	no	no	0.4180	0.4286	0.39	6994.84	9.78
ABAYE2747	CDS		2767376	2768125	750	+2	putative repressor protein from bacteriophage	3	validated/finished	no	no	0.3987	0.2880	0.54	27540.19	6.00
ABAYE2748	CDS		2768140	2768355	216	+1	conserved hypothetical protein	4	validated/finished	no	no	0.3935	0.3889	0.50	7850.73	8.25
ABAYE2749	CDS		2768473	2770755	2283	+1	conserved hypothetical protein; putative restriction-modification protein	3	validated/finished	no	no	0.3158	0.2405	0.50	87108.24	8.14
ABAYE2750	CDS		2770929	2771396	468	+3	conserved hypothetical protein; putative exported protein	4	validated/finished	no	no	0.4038	0.3269	0.60	16851.55	5.65
ABAYE2751	CDS		2771396	2771722	327	+2	conserved hypothetical protein	5	validated/finished	no	no	0.4098	0.4037	0.53	12751.08	10.08
ABAYE2752	CDS		2771719	2772855	1137	+1	hypothetical protein; putative phage-related protein	3	validated/finished	no	no	0.4134	0.3087	0.64	41856.06	6.10
ABAYE2753	CDS		2772852	2773916	1065	+3	conserved hypothetical protein	5	validated/finished	no	no	0.3840	0.2535	0.58	39766.48	4.56
ABAYE2754	CDS		2773916	2774212	297	+2	hypothetical protein	5	validated/finished	no	no	0.4310	0.4747	0.48	11295.84	9.66
ABAYE2755	CDS		2774209	2774709	501	+1	putative Methyltransferase	3	validated/finished	no	no	0.3593	0.2874	0.57	19416.78	9.05
ABAYE2756	CDS		2774710	2774973	264	+1	hypothetical protein	5	validated/finished	no	no	0.4091	0.3409	0.59	9979.15	9.38
ABAYE2757	CDS		2775394	2775711	318	-1	conserved hypothetical protein; putative signal peptide	3	validated/finished	no	no	0.3491	0.2358	0.54	11978.29	7.94
ABAYE2758	CDS		2776005	2776355	351	-2	conserved hypothetical protein; putative signal peptide	4	validated/finished	no	no	0.3219	0.2393	0.61	13291.90	5.45
ABAYE2759	CDS		2776574	2777173	600	+2	putative ligase	4	validated/finished	no	no	0.3333	0.2350	0.55	23619.76	9.95
ABAYE2760	CDS	lon	2777659	2780088	2430	+1	Lon protease	2	automatic/finished	no	no	0.4033	0.2790	0.66	90123.95	5.62

Sequence

Label

Type

Gene

Begin

End

Length

Frame

Product

Matrix

Evidence

AMIGene Status

Mutation

GC Content

GC3 Content

CAI

Mw (Da)

History

ABAYE2698

CDS

2735722

2740029

4308

-1

putative bacteriophage protein

validated/finished

0.4113

0.2820

0.51

155515.38

8.35

ABAYE2699

CDS

2740157

2740420

264

-3

hypothetical protein

validated/finished

0.3523

0.2045

0.49

9656.00

8.87

ABAYE2700

CDS

2740422

2741111

690

-2

hypothetical protein; putative exported protein

validated/finished

0.3449

0.2478

0.55

25114.75

9.17

ABAYE2701

CDS

2741207

2741665

459

-3

conserved hypothetical protein from bacteriophage

validated/finished

0.3638

0.2549

0.49

17459.94

5.32

ABAYE2702

CDS

2741674

2741988

315

-1

hypothetical protein

validated/finished

0.3873

0.3048

0.51

11679.12

8.61

ABAYE2703

CDS

2742219

2742548

330

-2

hypothetical protein

validated/finished

0.4121

0.4364

0.44

12500.77

6.46

ABAYE2704

CDS

2742476

2742991

516

-3

conserved hypothetical protein

validated/finished

0.4186

0.4012

0.50

19260.27

9.19

ABAYE2705

CDS

2743061

2743978

918

-3

conserved hypothetical protein

validated/finished

0.4325

0.3693

0.51

33139.26

4.86

ABAYE2706

CDS

2744074

2745171

1098

-1

conserved hypothetical protein

validated/finished

0.4226

0.3169

0.51

39777.79

4.82

ABAYE2707

CDS

2745171

2745521

351

-2

conserved hypothetical protein

validated/finished

0.4330

0.3846

0.50

12591.72

4.79

ABAYE2708

CDS

2745617

2745835

219

-3

conserved hypothetical protein

validated/finished

0.3562

0.2740

0.47

8214.09

5.26

ABAYE2709

CDS

2745837

2746280

444

-2

conserved hypothetical protein

validated/finished

0.4144

0.3514

0.52

16384.32

8.42

ABAYE2710

CDS

2746237

2746605

369

-1

conserved hypothetical protein

validated/finished

0.4173

0.3496

0.57

13259.38

8.15

ABAYE2711

CDS

2746577

2746984

408

-3

hypothetical protein

validated/finished

0.4020

0.3456

0.51

15546.99

4.72

ABAYE2712

CDS

2747038

2747685

648

-1

hypothetical protein

validated/finished

0.2762

0.1944

0.60

25156.44

5.87

ABAYE2713

CDS

2747723

2748091

369

-3

conserved hypothetical protein

validated/finished

0.4119

0.3740

0.54

13873.14

4.83

ABAYE2714

CDS

2748091

2748471

381

-1

conserved hypothetical protein

validated/finished

0.3911

0.3228

0.53

14316.96

6.82

ABAYE2715

CDS

2748475

2748831

357

-1

hypothetical protein

validated/finished

0.4174

0.2857

0.62

13000.02

4.59

ABAYE2716

CDS

2748876

2749826

951

-2

putative coat protein from bacteriophage

validated/finished

0.4469

0.3249

0.61

33439.30

4.82

ABAYE2717

CDS

2749840

2750595

756

-1

conserved hypothetical protein

validated/finished

0.4140

0.3413

0.58

27767.37

5.09

ABAYE2718

CDS

2750705

2751337

633

-3

hypothetical protein; putative exported protein

validated/finished

0.3886

0.2512

0.61

23738.70

5.52

ABAYE2719

CDS

2751379

2751603

225

-1

hypothetical protein

validated/finished

0.3333

0.2000

0.55

8121.88

6.11

ABAYE2720

CDS

2751616

2751852

237

-1

hypothetical protein

validated/finished

0.3882

0.1899

0.63

8410.25

5.59

ABAYE2721

CDS

2751951

2752379

429

-2

hypothetical protein; putative exported protein

validated/finished

0.3263

0.2028

0.57

15959.54

5.45

ABAYE2722

CDS

2752389

2753495

1107

-2

conserved hypothetical protein; putative Phage head morphogenesis protein

validated/finished

0.4038

0.3469

0.47

41830.36

8.83

ABAYE2723

CDS

2753505

2754851

1347

-2

conserved hypothetical protein

validated/finished

0.4328

0.3697

0.49

49791.16

4.78

ABAYE2724

CDS

2754891

2756204

1314

-2

conserved hypothetical protein; putative phage terminase

validated/finished

0.4132

0.3562

0.48

49378.81

9.04

ABAYE2725

CDS

2756143

2756658

516

-1

conserved hypothetical protein; putative phage-related protein

validated/finished

0.3798

0.3430

0.52

19816.95

6.95

ABAYE2726

CDS

2756717

2757358

642

-3

conserved hypothetical protein

validated/finished

0.4190

0.3458

0.50

24330.68

4.99

ABAYE2727

CDS

2757327

2757794

468

-2

conserved hypothetical protein

validated/finished

0.3718

0.2885

0.51

18377.41

9.85

ABAYE2728

CDS

2757848

2758126

279

-3

hypothetical protein

validated/finished

0.3226

0.49

10694.62

4.46

ABAYE2729

CDS

2758417

2759634

1218

-1

conserved hypothetical protein from bacteriophage

validated/finished

0.3456

0.2241

0.53

45527.83

5.88

ABAYE2730

CDS

2759950

2760702

753

-1

conserved hypothetical protein

validated/finished

0.3732

0.2669

0.52

28186.60

9.22

ABAYE2731

CDS

2760713

2761117

405

-3

conserved hypothetical protein

validated/finished

0.4123

0.4148

0.37

15266.30

10.13

ABAYE2732

CDS

2761114

2761476

363

-1

conserved hypothetical protein

validated/finished

0.4187

0.3636

0.47

14152.62

9.69

ABAYE2733

CDS

2761427

2761606

180

-3

hypothetical protein

validated/finished

0.4167

0.3833

0.37

6734.25

9.06

ABAYE2734

CDS

2761603

2762001

399

-1

conserved hypothetical protein

validated/finished

0.4236

0.3684

0.47

15209.90

8.95

ABAYE2735

CDS

2761998

2762123

126

-2

hypothetical protein; putative exported protein

validated/finished

0.3810

0.60

4706.44

10.00

ABAYE2736

CDS

2762120

2762845

726

-3

fragment of conserved hypothetical protein

validated/finished

partial

0.4050

0.3306

0.52

27606.94

5.09

ABAYE2737

CDS

2762842

2763291

450

-1

hypothetical protein

validated/finished

0.4200

0.3800

0.44

17291.84

5.09

ABAYE2738

CDS

2763284

2763592

309

-3

hypothetical protein

validated/finished

0.4078

0.4369

0.50

12001.16

5.71

ABAYE2739

CDS

2763725

2764033

309

-3

hypothetical protein

validated/finished

0.4110

0.3592

0.49

11637.74

6.09

ABAYE2740

CDS

2764030

2764206

177

-1

hypothetical protein

validated/finished

0.4407

0.5254

0.40

6960.96

9.99

ABAYE2741

CDS

2764203

2764460

258

-2

conserved hypothetical protein

validated/finished

0.3760

0.3953

0.48

9908.99

9.55

ABAYE2742

CDS

2764457

2765779

1323

-3

DNA helicase

automatic/finished

0.4157

0.3673

0.59

49458.72

6.23

ABAYE2743

CDS

2765773

2766603

831

-1

hypothetical protein

validated/finished

0.3670

0.3105

0.62

31757.66

6.44

ABAYE2744

CDS

2766600

2766758

159

-2

hypothetical protein

validated/finished

0.3648

0.2830

0.46

5784.58

9.30

ABAYE2745

CDS

2766799

2767074

276

-1

conserved hypothetical protein

validated/finished

0.4058

0.4022

0.52

10339.47

9.19

ABAYE2746

CDS

2767083

2767271

189

-2

conserved hypothetical protein

validated/finished

0.4180

0.4286

0.39

6994.84

9.78

ABAYE2747

CDS

2767376

2768125

750

putative repressor protein from bacteriophage

validated/finished

0.3987

0.2880

0.54

27540.19

6.00

ABAYE2748

CDS

2768140

2768355

216

conserved hypothetical protein

validated/finished

0.3935

0.3889

0.50

7850.73

8.25

ABAYE2749

CDS

2768473

2770755

2283

conserved hypothetical protein; putative restriction-modification protein

validated/finished

0.3158

0.2405

0.50

87108.24

8.14

ABAYE2750

CDS

2770929

2771396

468

conserved hypothetical protein; putative exported protein

validated/finished

0.4038

0.3269

0.60

16851.55

5.65

ABAYE2751

CDS

2771396

2771722

327

conserved hypothetical protein

validated/finished

0.4098

0.4037

0.53

12751.08

10.08

ABAYE2752

CDS

2771719

2772855

1137

hypothetical protein; putative phage-related protein

validated/finished

0.4134

0.3087

0.64

41856.06

6.10

ABAYE2753

CDS

2772852

2773916

1065

conserved hypothetical protein

validated/finished

0.3840

0.2535

0.58

39766.48

4.56

ABAYE2754

CDS

2773916

2774212

297

hypothetical protein

validated/finished

0.4310

0.4747

0.48

11295.84

9.66

ABAYE2755

CDS

2774209

2774709

501

putative Methyltransferase

validated/finished

0.3593

0.2874

0.57

19416.78

9.05

ABAYE2756

CDS

2774710

2774973

264

hypothetical protein

validated/finished

0.4091

0.3409

0.59

9979.15

9.38

ABAYE2757

CDS

2775394

2775711

318

-1

conserved hypothetical protein; putative signal peptide

validated/finished

0.3491

0.2358

0.54

11978.29

7.94

ABAYE2758

CDS

2776005

2776355

351

-2

conserved hypothetical protein; putative signal peptide

validated/finished

0.3219

0.2393

0.61

13291.90

5.45

ABAYE2759

CDS

2776574

2777173

600

putative ligase

validated/finished

0.3333

0.2350

0.55

23619.76

9.95

ABAYE2760

CDS

lon

2777659

2780088

2430

Lon protease

automatic/finished

0.4033

0.2790

0.66

90123.95

5.62

Sequence	Id	Begin	End	Comments
	RPTR1387085	2763076	2763301	1 repeats
	RPTR1387086	2775193	2775306	1 repeats

Sequence

Begin

End

Comments

RPTR1387085

2763076

2763301

1 repeats

RPTR1387086

2775193

2775306

1 repeats

Acinetobacter baumannii AYE - chromosome ABAYE.1 Public

(sequence length : 3936291 bases)