BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 5561c73a97d6cdfe67ebc7c1e2a26395.SwissProt.fasta
           1 sequences; 427 total letters



Query= Z5987

Length=88
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

B1N002 Adenylosuccinate synthetase [Leuconostoc citreum (strain K...  31.2    2e-06


>B1N002 Adenylosuccinate synthetase [Leuconostoc citreum (strain 
KM20)]
Length=427

 Score = 31.2 bits (69),  Expect = 2e-06
 Identities = 20/57 (35%), Positives = 34/57 (60%), Gaps = 5/57 (9%)

Query  18   QRISWLAAVRIRHKLSLAEVSKMLGISINSLKQIE--KTERLSSNIKSKMAEIYGCP  72
            +RI WL AV +RH +   +VS +  ++INSL  +   KT +++++   K  EI+  P
Sbjct  303  RRIGWLDAVALRHAV---QVSGLTKLAINSLDVLTGLKTLKIATSYTYKGEEIHHFP  356



Lambda      K        H        a         alpha
   0.326    0.135    0.398    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 27676


  Database: 5561c73a97d6cdfe67ebc7c1e2a26395.SwissProt.fasta
    Posted date:  May 20, 2024  5:11 AM
  Number of letters in database: 427
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40