BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 121c82544739b5803a26b808f7ef2a65.SwissProt.fasta
18 sequences; 4,360 total letters
Query= Z4998
Length=158
Score E
Sequences producing significant alignments: (Bits) Value
P56256 Putative electron transport protein YsaA [Escherichia coli... 335 6e-124
P0AAK5 Electron transport protein HydN [Escherichia coli O6:H1 (s... 211 1e-74
P0AAK6 Electron transport protein HydN [Escherichia coli O157:H7] 211 1e-74
P0AAK4 Electron transport protein HydN [Escherichia coli (strain ... 211 1e-74
Q46819 Putative electron transport protein YgfS [Escherichia coli... 149 3e-50
P37127 Putative oxidoreductase AegA [Escherichia coli (strain K12)] 159 9e-50
P20925 Frd operon probable iron-sulfur subunit A [Proteus vulgaris] 140 6e-47
P0AAK3 Formate hydrogenlyase subunit 2 [Shigella flexneri] 139 1e-45
P0AAK2 Formate hydrogenlyase subunit 2 [Escherichia coli O6:H1 (s... 139 1e-45
P0AAK1 Formate hydrogenlyase subunit 2 [Escherichia coli (strain ... 139 1e-45
Q46820 Putative oxidoreductase UacF [Escherichia coli (strain K12)] 147 2e-45
P31894 Iron-sulfur protein [Rhodospirillum rubrum] 119 5e-38
P23481 Hydrogenase-4 component A [Escherichia coli (strain K12)] 116 1e-36
P0AAJ1 Probable anaerobic dimethyl sulfoxide reductase chain YnfG... 99.0 6e-30
P0AAJ2 Probable anaerobic dimethyl sulfoxide reductase chain YnfG... 99.0 6e-30
P18776 Anaerobic dimethyl sulfoxide reductase chain B [Escherichi... 98.2 1e-29
P0A1I1 Thiosulfate reductase electron transfer subunit PhsB [Salm... 90.5 8e-27
Q7CQM9 Tetrathionate reductase subunit B [Salmonella typhimurium ... 89.4 8e-26
>P56256 Putative electron transport protein YsaA [Escherichia
coli (strain K12)]
Length=157
Score = 335 bits (860), Expect = 6e-124
Identities = 155/157 (99%), Positives = 155/157 (99%), Gaps = 0/157 (0%)
Query 1 MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTTAVACHQ 60
MNRFIIADATKCIGCRTCEVACAVSH ENQDCAALSPDEFISRIRVIKDH WTTAVACHQ
Sbjct 1 MNRFIIADATKCIGCRTCEVACAVSHHENQDCAALSPDEFISRIRVIKDHCWTTAVACHQ 60
Query 61 CEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRKKARAIKCDL 120
CEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRKKARAIKCDL
Sbjct 61 CEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRKKARAIKCDL 120
Query 121 CWHRETGPACVEACPTKALQCMDVEKVQRHRLRQQPV 157
CWHRETGPACVEACPTKALQCMDVEKVQRHRLRQQPV
Sbjct 121 CWHRETGPACVEACPTKALQCMDVEKVQRHRLRQQPV 157
>P0AAK5 Electron transport protein HydN [Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC)]
Length=175
Score = 211 bits (538), Expect = 1e-74
Identities = 101/162 (62%), Positives = 119/162 (73%), Gaps = 13/162 (8%)
Query 1 MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTTAVACHQ 60
MNRFIIADA+KCIGCRTCEVAC VSHQENQDCA+L+P+ F+ RI VIK + +TA C Q
Sbjct 1 MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRIHVIKGVNISTATVCRQ 60
Query 61 CEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVV------------- 107
CEDAPCANVCP AISR+ G + V Q RCIGCK+C++ACP+GAMEVV
Sbjct 61 CEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIRNSGAGLN 120
Query 108 SSRKKARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQR 149
KA A KCDLC HRE GPAC+ ACPT AL C+D K+++
Sbjct 121 VRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKLEQ 162
>P0AAK6 Electron transport protein HydN [Escherichia coli O157:H7]
Length=175
Score = 211 bits (538), Expect = 1e-74
Identities = 101/162 (62%), Positives = 119/162 (73%), Gaps = 13/162 (8%)
Query 1 MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTTAVACHQ 60
MNRFIIADA+KCIGCRTCEVAC VSHQENQDCA+L+P+ F+ RI VIK + +TA C Q
Sbjct 1 MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRIHVIKGVNISTATVCRQ 60
Query 61 CEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVV------------- 107
CEDAPCANVCP AISR+ G + V Q RCIGCK+C++ACP+GAMEVV
Sbjct 61 CEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIRNSGAGLN 120
Query 108 SSRKKARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQR 149
KA A KCDLC HRE GPAC+ ACPT AL C+D K+++
Sbjct 121 VRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKLEQ 162
>P0AAK4 Electron transport protein HydN [Escherichia coli (strain
K12)]
Length=175
Score = 211 bits (538), Expect = 1e-74
Identities = 101/162 (62%), Positives = 119/162 (73%), Gaps = 13/162 (8%)
Query 1 MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTTAVACHQ 60
MNRFIIADA+KCIGCRTCEVAC VSHQENQDCA+L+P+ F+ RI VIK + +TA C Q
Sbjct 1 MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRIHVIKGVNISTATVCRQ 60
Query 61 CEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVV------------- 107
CEDAPCANVCP AISR+ G + V Q RCIGCK+C++ACP+GAMEVV
Sbjct 61 CEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIRNSGAGLN 120
Query 108 SSRKKARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQR 149
KA A KCDLC HRE GPAC+ ACPT AL C+D K+++
Sbjct 121 VRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKLEQ 162
>Q46819 Putative electron transport protein YgfS [Escherichia
coli (strain K12)]
Length=162
Score = 149 bits (376), Expect = 3e-50
Identities = 72/159 (45%), Positives = 100/159 (63%), Gaps = 7/159 (4%)
Query 1 MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTTAVACHQ 60
M II + CIGCRTCEVAC V+H Q+ L+ D F+ R++V + S + V CHQ
Sbjct 1 MKSLIIVNPADCIGCRTCEVACVVAHPSEQE---LNADVFLPRLKVQRLDSISAPVMCHQ 57
Query 61 CEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVVS--SRKKARAIKC 118
CE+APC CPV A++ + RCIGC+SC+ ACPFG + + S + + +KC
Sbjct 58 CENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGDTRQQIVKC 117
Query 119 DLCWHRETGPACVEACPTKALQCMDVEKVQRHRLRQQPV 157
DLC RE GPACVE+CPT+ALQ + +++ R+RQQ +
Sbjct 118 DLCEQREEGPACVESCPTQALQLLTERELR--RVRQQRI 154
>P37127 Putative oxidoreductase AegA [Escherichia coli (strain
K12)]
Length=659
Score = 159 bits (402), Expect = 9e-50
Identities = 77/145 (53%), Positives = 94/145 (65%), Gaps = 7/145 (5%)
Query 1 MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTTAVACHQ 60
MNRFI+A++ +C+GC CE+AC ++H + Q LS F RI VIK +AV CH
Sbjct 1 MNRFIMANSQQCLGCHACEIACVMAHNDEQH--VLSQHHFHPRITVIKHQQQRSAVTCHH 58
Query 61 CEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVV-----SSRKKARA 115
CEDAPCA CP AIS I V Q +CIGCKSC++ACPFG M++V + + KA A
Sbjct 59 CEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFGTMQIVLTPVAAGKVKATA 118
Query 116 IKCDLCWHRETGPACVEACPTKALQ 140
KCDLC RE GPACVE CP ALQ
Sbjct 119 HKCDLCAGRENGPACVENCPADALQ 143
Score = 18.9 bits (37), Expect = 0.99
Identities = 22/90 (24%), Positives = 33/90 (37%), Gaps = 25/90 (28%)
Query 8 DATKCIGC---RTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTTAVAC-HQCED 63
+A++C+ C CE C + + Q I ++K + AV HQ
Sbjct 223 EASRCLKCGEHSVCEWTCPLHNHIPQ------------WIELVKAGNIDAAVELSHQTNT 270
Query 64 AP--CANVCPVD-------AISREHGHIFV 84
P VCP D I EHG + +
Sbjct 271 LPEITGRVCPQDRLCEGACTIRDEHGAVTI 300
>P20925 Frd operon probable iron-sulfur subunit A [Proteus vulgaris]
Length=157
Score = 140 bits (354), Expect = 6e-47
Identities = 69/127 (54%), Positives = 84/127 (66%), Gaps = 13/127 (10%)
Query 35 LSPDEFISRIRVIKDHSWTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKS 94
+S F RI V+K S +TAV CHQCEDAPCANVCP AI + +V+Q +CIGCK+
Sbjct 11 ISEQNFQPRIHVVKGFSISTAVVCHQCEDAPCANVCPNGAIIHNKDYYYVDQDKCIGCKT 70
Query 95 CMLACPFGAMEVVS---SRK----------KARAIKCDLCWHRETGPACVEACPTKALQC 141
C+LACP+G MEVVS RK KA A KCDLC HR GPACVE CPT+AL C
Sbjct 71 CVLACPYGTMEVVSRPVMRKLTALNTIEAFKAEANKCDLCHHRAEGPACVEVCPTQALVC 130
Query 142 MDVEKVQ 148
+D + ++
Sbjct 131 IDRDALE 137
Score = 42.0 bits (97), Expect = 9e-09
Identities = 20/72 (28%), Positives = 30/72 (42%), Gaps = 0/72 (0%)
Query 4 FIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTTAVACHQCED 63
+ D KCIGC+TC +AC E + ++ I K + + H+ E
Sbjct 57 YYYVDQDKCIGCKTCVLACPYGTMEVVSRPVMRKLTALNTIEAFKAEANKCDLCHHRAEG 116
Query 64 APCANVCPVDAI 75
C VCP A+
Sbjct 117 PACVEVCPTQAL 128
>P0AAK3 Formate hydrogenlyase subunit 2 [Shigella flexneri]
Length=203
Score = 139 bits (350), Expect = 1e-45
Identities = 73/187 (39%), Positives = 101/187 (54%), Gaps = 39/187 (21%)
Query 1 MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTTAVACHQ 60
MNRF+IAD+T CIGC TCE AC+ +H+++ + + R+RV+ + + CH
Sbjct 1 MNRFVIADSTLCIGCHTCEAACSETHRQHGL-------QSMPRLRVMLNEKESAPQLCHH 53
Query 61 CEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRK--------- 111
CEDAPCA VCPV+AI+R G + + ++ C+ CK C +ACPFGA+E SR
Sbjct 54 CEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGSRPLDIPANANT 113
Query 112 -----------------------KARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQ 148
+A A+KCDLC E GPACV CPTKAL +D +
Sbjct 114 PKAPPAPPAPARVSTLLDWVPGIRAIAVKCDLCSFDEQGPACVRMCPTKALHLVDNTDIA 173
Query 149 RHRLRQQ 155
R R++
Sbjct 174 RVSKRKR 180
>P0AAK2 Formate hydrogenlyase subunit 2 [Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC)]
Length=203
Score = 139 bits (350), Expect = 1e-45
Identities = 73/187 (39%), Positives = 101/187 (54%), Gaps = 39/187 (21%)
Query 1 MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTTAVACHQ 60
MNRF+IAD+T CIGC TCE AC+ +H+++ + + R+RV+ + + CH
Sbjct 1 MNRFVIADSTLCIGCHTCEAACSETHRQHGL-------QSMPRLRVMLNEKESAPQLCHH 53
Query 61 CEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRK--------- 111
CEDAPCA VCPV+AI+R G + + ++ C+ CK C +ACPFGA+E SR
Sbjct 54 CEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGSRPLDIPANANT 113
Query 112 -----------------------KARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQ 148
+A A+KCDLC E GPACV CPTKAL +D +
Sbjct 114 PKAPPAPPAPARVSTLLDWVPGIRAIAVKCDLCSFDEQGPACVRMCPTKALHLVDNTDIA 173
Query 149 RHRLRQQ 155
R R++
Sbjct 174 RVSKRKR 180
>P0AAK1 Formate hydrogenlyase subunit 2 [Escherichia coli (strain
K12)]
Length=203
Score = 139 bits (350), Expect = 1e-45
Identities = 73/187 (39%), Positives = 101/187 (54%), Gaps = 39/187 (21%)
Query 1 MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTTAVACHQ 60
MNRF+IAD+T CIGC TCE AC+ +H+++ + + R+RV+ + + CH
Sbjct 1 MNRFVIADSTLCIGCHTCEAACSETHRQHGL-------QSMPRLRVMLNEKESAPQLCHH 53
Query 61 CEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRK--------- 111
CEDAPCA VCPV+AI+R G + + ++ C+ CK C +ACPFGA+E SR
Sbjct 54 CEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGSRPLDIPANANT 113
Query 112 -----------------------KARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQ 148
+A A+KCDLC E GPACV CPTKAL +D +
Sbjct 114 PKAPPAPPAPARVSTLLDWVPGIRAIAVKCDLCSFDEQGPACVRMCPTKALHLVDNTDIA 173
Query 149 RHRLRQQ 155
R R++
Sbjct 174 RVSKRKR 180
>Q46820 Putative oxidoreductase UacF [Escherichia coli (strain
K12)]
Length=639
Score = 147 bits (370), Expect = 2e-45
Identities = 70/156 (45%), Positives = 102/156 (65%), Gaps = 7/156 (4%)
Query 1 MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTTAVACHQ 60
MN+FI A+A +CIGC CE+ACAV+H NQ+ LS +F RI V+ VACH
Sbjct 1 MNKFIAAEAAECIGCHACEIACAVAH--NQENWPLSHSDFRPRIHVVGKGQAANPVACHH 58
Query 61 CEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRKKARAIKCDL 120
C +APC CPV+A++ + + +++ +CIGCK C +ACPFG +E+V + A KCDL
Sbjct 59 CNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDT----IAQKCDL 114
Query 121 CWHRETG-PACVEACPTKALQCMDVEKVQRHRLRQQ 155
C R +G AC+E CPT+AL+ MD + +Q+ ++ +Q
Sbjct 115 CNQRSSGTQACIEVCPTQALRLMDDKGLQQIKVARQ 150
Score = 23.5 bits (49), Expect = 0.031
Identities = 10/23 (43%), Positives = 11/23 (48%), Gaps = 2/23 (9%)
Query 55 AVACHQCEDAP--CANVCPVDAI 75
A CHQ P C VCP D +
Sbjct 245 AELCHQTSSLPEICGRVCPQDRL 267
Score = 16.2 bits (30), Expect = 7.3
Identities = 6/13 (46%), Positives = 7/13 (54%), Gaps = 0/13 (0%)
Query 12 CIGCRTCEVACAV 24
C R CE AC +
Sbjct 262 CPQDRLCEGACTL 274
>P31894 Iron-sulfur protein [Rhodospirillum rubrum]
Length=190
Score = 119 bits (298), Expect = 5e-38
Identities = 62/159 (39%), Positives = 85/159 (53%), Gaps = 15/159 (9%)
Query 2 NRFIIADATKCIGCRTCEVACAVSHQENQDC--AALSPDEFISRIRVIKDHSWTTAVACH 59
N I A+ C+ C +CE+ACAV+H D A + +R +V+ + C
Sbjct 7 NVIIYANPDHCLSCHSCELACAVAHSGGHDMIEAIAANLPLHARNKVVSVDGTAMPMQCR 66
Query 60 QCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSS--------RK 111
QCEDAPC CP A + G + + + CIGCK C++ CPFGA+ V S
Sbjct 67 QCEDAPCTFACPTGACRQADGQVQIVEQHCIGCKLCVMVCPFGAITVRSETVVEQGACTN 126
Query 112 KARAIKCDLC--WHRETG---PACVEACPTKALQCMDVE 145
+ A KCDLC W TG PACVEACPTKA++ +D++
Sbjct 127 RGVAKKCDLCVDWRASTGKTAPACVEACPTKAIRMVDLD 165
Score = 31.6 bits (70), Expect = 5e-05
Identities = 29/95 (31%), Positives = 40/95 (42%), Gaps = 25/95 (26%)
Query 77 REHGHIFVEQTRCIGCKSCMLAC------------------PFGAM-EVVSSRKKARAIK 117
+E+ I+ C+ C SC LAC P A +VVS A ++
Sbjct 5 KENVIIYANPDHCLSCHSCELACAVAHSGGHDMIEAIAANLPLHARNKVVSVDGTAMPMQ 64
Query 118 CDLCWHRETGPACVEACPTKALQCMD--VEKVQRH 150
C C E P C ACPT A + D V+ V++H
Sbjct 65 CRQC---EDAP-CTFACPTGACRQADGQVQIVEQH 95
>P23481 Hydrogenase-4 component A [Escherichia coli (strain K12)]
Length=205
Score = 116 bits (290), Expect = 1e-36
Identities = 65/190 (34%), Positives = 89/190 (47%), Gaps = 42/190 (22%)
Query 1 MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTTAVACHQ 60
MNRF++A+ C GC TC AC+ H+ L R+ + K + T V CH
Sbjct 1 MNRFVVAEPLWCTGCNTCLAACSDVHKTQ----GLQQHP---RLALAKTSTITAPVVCHH 53
Query 61 CEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRK--------- 111
CE+APC VCPV+AIS+ I + ++ CIGCK C + CPFGA+ SR
Sbjct 54 CEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAISASGSRPVNAHAQYVF 113
Query 112 --------------------------KARAIKCDLCWHRETGPACVEACPTKALQCMDVE 145
+ A+KCDLC GPACV ACP +AL+ + +
Sbjct 114 QAEGSLKDGEENAPTQHALLRWEPGVQTVAVKCDLCDFLPEGPACVRACPNQALRLITGD 173
Query 146 KVQRHRLRQQ 155
+QR +Q
Sbjct 174 SLQRQMKEKQ 183
Score = 19.2 bits (38), Expect = 0.64
Identities = 11/29 (38%), Positives = 12/29 (41%), Gaps = 2/29 (7%)
Query 128 PACVEACPTKALQCMDVEKVQRHRLRQQP 156
P C T C DV K Q L+Q P
Sbjct 9 PLWCTGCNTCLAACSDVHKTQ--GLQQHP 35
>P0AAJ1 Probable anaerobic dimethyl sulfoxide reductase chain
YnfG [Escherichia coli (strain K12)]
Length=205
Score = 99.0 bits (245), Expect = 6e-30
Identities = 54/162 (33%), Positives = 84/162 (52%), Gaps = 28/162 (17%)
Query 8 DATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTT------------- 54
D+++C GC+TCE+AC +D L P+ RI W
Sbjct 10 DSSRCTGCKTCELAC-------KDFKDLGPEVSFRRIYEYAGGDWQEDNGVWHQNVFAYY 62
Query 55 -AVACHQCEDAPCANVCPVDAI-SREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRKK 112
+++C+ C+D C VCP A+ RE G + V++ CIGC+ C +ACP+GA + + +K
Sbjct 63 LSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQY--NAEK 120
Query 113 ARAIKCDLCWHRET---GPACVEACPTKALQCMDVEKV-QRH 150
KCD C+ R P CVE+CP +AL+ +E++ Q+H
Sbjct 121 GHMTKCDGCYSRVAEGKQPICVESCPLRALEFGPIEELRQKH 162
Score = 31.6 bits (70), Expect = 5e-05
Identities = 10/17 (59%), Positives = 14/17 (82%), Gaps = 0/17 (0%)
Query 83 FVEQTRCIGCKSCMLAC 99
F++ +RC GCK+C LAC
Sbjct 8 FIDSSRCTGCKTCELAC 24
Score = 30.8 bits (68), Expect = 9e-05
Identities = 10/19 (53%), Positives = 13/19 (68%), Gaps = 0/19 (0%)
Query 4 FIIADATKCIGCRTCEVAC 22
F++ D CIGCR C +AC
Sbjct 91 FVVVDEDVCIGCRYCHMAC 109
>P0AAJ2 Probable anaerobic dimethyl sulfoxide reductase chain
YnfG [Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 /
UPEC)]
Length=205
Score = 99.0 bits (245), Expect = 6e-30
Identities = 54/162 (33%), Positives = 84/162 (52%), Gaps = 28/162 (17%)
Query 8 DATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTT------------- 54
D+++C GC+TCE+AC +D L P+ RI W
Sbjct 10 DSSRCTGCKTCELAC-------KDFKDLGPEVSFRRIYEYAGGDWQEDNGVWHQNVFAYY 62
Query 55 -AVACHQCEDAPCANVCPVDAI-SREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRKK 112
+++C+ C+D C VCP A+ RE G + V++ CIGC+ C +ACP+GA + + +K
Sbjct 63 LSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQY--NAEK 120
Query 113 ARAIKCDLCWHRET---GPACVEACPTKALQCMDVEKV-QRH 150
KCD C+ R P CVE+CP +AL+ +E++ Q+H
Sbjct 121 GHMTKCDGCYSRVAEGKQPICVESCPLRALEFGPIEELRQKH 162
Score = 31.6 bits (70), Expect = 5e-05
Identities = 10/17 (59%), Positives = 14/17 (82%), Gaps = 0/17 (0%)
Query 83 FVEQTRCIGCKSCMLAC 99
F++ +RC GCK+C LAC
Sbjct 8 FIDSSRCTGCKTCELAC 24
Score = 30.8 bits (68), Expect = 9e-05
Identities = 10/19 (53%), Positives = 13/19 (68%), Gaps = 0/19 (0%)
Query 4 FIIADATKCIGCRTCEVAC 22
F++ D CIGCR C +AC
Sbjct 91 FVVVDEDVCIGCRYCHMAC 109
>P18776 Anaerobic dimethyl sulfoxide reductase chain B [Escherichia
coli (strain K12)]
Length=205
Score = 98.2 bits (243), Expect = 1e-29
Identities = 52/160 (33%), Positives = 82/160 (51%), Gaps = 27/160 (17%)
Query 8 DATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTT------------- 54
D+++C GC+TCE+AC +D L+P+ RI W
Sbjct 10 DSSRCTGCKTCELAC-------KDYKDLTPEVSFRRIYEYAGGDWQEDNGVWHQNVFAYY 62
Query 55 -AVACHQCEDAPCANVCPVDAI-SREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRKK 112
+++C+ CED C VCP A+ RE G + V++ CIGC+ C +ACP+GA + + K
Sbjct 63 LSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQY--NETK 120
Query 113 ARAIKCDLCWHRET---GPACVEACPTKALQCMDVEKVQR 149
KCD C+ R P CVE+CP +AL ++++++
Sbjct 121 GHMTKCDGCYDRVAEGKKPICVESCPLRALDFGPIDELRK 160
Score = 32.0 bits (71), Expect = 4e-05
Identities = 22/77 (29%), Positives = 31/77 (40%), Gaps = 20/77 (26%)
Query 83 FVEQTRCIGCKSCMLACP--FGAMEVVSSRKKARAIKCDL-----CWHRET--------- 126
F++ +RC GCK+C LAC VS R+ D WH+
Sbjct 8 FIDSSRCTGCKTCELACKDYKDLTPEVSFRRIYEYAGGDWQEDNGVWHQNVFAYYLSISC 67
Query 127 ----GPACVEACPTKAL 139
PAC + CP+ A+
Sbjct 68 NHCEDPACTKVCPSGAM 84
Score = 30.8 bits (68), Expect = 9e-05
Identities = 10/19 (53%), Positives = 13/19 (68%), Gaps = 0/19 (0%)
Query 4 FIIADATKCIGCRTCEVAC 22
F++ D CIGCR C +AC
Sbjct 91 FVVVDEDVCIGCRYCHMAC 109
>P0A1I1 Thiosulfate reductase electron transfer subunit PhsB [Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)]
Length=192
Score = 90.5 bits (223), Expect = 8e-27
Identities = 53/157 (34%), Positives = 83/157 (53%), Gaps = 18/157 (11%)
Query 5 IIADATKCIGCRTCEVACAVSHQENQDCAAL-----SPDEFISRIRVIKDHSWTTAVACH 59
++ D +CIGC+ C VAC V + + + + +P++ + + H V+C
Sbjct 10 MLHDEKRCIGCQACTVACKVLNDVPEGFSRVQVQIRAPEQASNALT----HFQFVRVSCQ 65
Query 60 QCEDAPCANVCPVDAISR-EHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRKKARAIKC 118
CE+APC +VCP A R E+G + V+++RCIGC C+ ACPF + + + A KC
Sbjct 66 HCENAPCVSVCPTGASYRDENGIVQVDKSRCIGCDYCVAACPFHVRYL--NPQTGVADKC 123
Query 119 DLCWHRE----TGPACVEACPTKALQC--MDVEKVQR 149
+ C PACV CPT AL+ +D ++QR
Sbjct 124 NFCADTRLAAGQSPACVSVCPTDALKFGRLDESEIQR 160
Score = 28.9 bits (63), Expect = 4e-04
Identities = 19/75 (25%), Positives = 26/75 (35%), Gaps = 13/75 (17%)
Query 2 NRFIIADATKCIGCRTCEVACAVS-HQENQDCAALSPDEFISRIRVIKDHSWTTAVACHQ 60
N + D ++CIGC C AC N F + R+ S
Sbjct 86 NGIVQVDKSRCIGCDYCVAACPFHVRYLNPQTGVADKCNFCADTRLAAGQS--------- 136
Query 61 CEDAPCANVCPVDAI 75
C +VCP DA+
Sbjct 137 ---PACVSVCPTDAL 148
>Q7CQM9 Tetrathionate reductase subunit B [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=250
Score = 89.4 bits (220), Expect = 8e-26
Identities = 47/135 (35%), Positives = 74/135 (55%), Gaps = 7/135 (5%)
Query 5 IIADATKCIGCRTCEVACAVSHQENQDCAALSPDEF-ISRIRVIKDHSWTTAVACHQCED 63
++ D +CIGC++C V+C + +Q Q + +++ + R + + C+ C++
Sbjct 52 MLIDLRRCIGCQSCTVSCTIENQTPQGAFRTTVNQYQVQREGSQEVTNVLLPRLCNHCDN 111
Query 64 APCANVCPVDA-ISREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRKKARAIKCDLCW 122
PC VCPV A RE G + V+ RC+GC C+ ACP+ A + + + A KC C
Sbjct 112 PPCVPVCPVQATFQREDGIVVVDNKRCVGCAYCVQACPYDARFI--NHETQTADKCTFCV 169
Query 123 HR-ETG--PACVEAC 134
HR E G PACVE+C
Sbjct 170 HRLEAGLLPACVESC 184
Score = 35.0 bits (79), Expect = 4e-06
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 16/72 (22%)
Query 82 IFVEQTRCIGCKSCMLAC------PFGAMEVV---------SSRKKARAIKCDLCWHRET 126
+ ++ RCIGC+SC ++C P GA S++ + LC H +
Sbjct 52 MLIDLRRCIGCQSCTVSCTIENQTPQGAFRTTVNQYQVQREGSQEVTNVLLPRLCNHCDN 111
Query 127 GPACVEACPTKA 138
P CV CP +A
Sbjct 112 -PPCVPVCPVQA 122
Score = 23.1 bits (48), Expect = 0.036
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 21/81 (26%)
Query 5 IIADATKCIGCRTCEVACA-----VSH--QENQDC--------AALSP---DEFISRIRV 46
++ D +C+GC C AC ++H Q C A L P + + R+
Sbjct 131 VVVDNKRCVGCAYCVQACPYDARFINHETQTADKCTFCVHRLEAGLLPACVESCVGGARI 190
Query 47 I---KDHSWTTAVACHQCEDA 64
I KD A HQ DA
Sbjct 191 IGDIKDPHSRIATMLHQHRDA 211
Lambda K H a alpha
0.331 0.136 0.472 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 435302
Database: 121c82544739b5803a26b808f7ef2a65.SwissProt.fasta
Posted date: Jun 1, 2024 5:14 PM
Number of letters in database: 4,360
Number of sequences in database: 18
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
