BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 15f074669d02bbc80b9a02a7caf22ad7.SwissProt.fasta
           2 sequences; 1,075 total letters



Query= Z4887

Length=541
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P37627 Uncharacterized protein YhiJ [Escherichia coli (strain K12)]   1068    0.0  
P37629 Putative uncharacterized protein YhiL [Escherichia coli (s...  243     1e-77


>P37627 Uncharacterized protein YhiJ [Escherichia coli (strain 
K12)]
Length=540

 Score = 1068 bits (2761),  Expect = 0.0
 Identities = 521/540 (96%), Positives = 530/540 (98%), Gaps = 0/540 (0%)

Query  1    MKIGTVAGTNDSTTTIATNDMVQEHVTNFTKELFGYIANGIGDDISSIARTMLGEVLEKV  60
            MKIGTVAGTNDSTTTIATNDMVQEHVTNFTKELFGYIANGIGDDISSIARTMLGEV+EK+
Sbjct  1    MKIGTVAGTNDSTTTIATNDMVQEHVTNFTKELFGYIANGIGDDISSIARTMLGEVVEKI  60

Query  61   DDWQIERFQQSIQDDKISFTIQTDYSEKYSMLSGMRAHILRRNNHYQFIVTINSKNYGCP  120
            DDWQIERFQQSIQDDKISFTIQTD+SEKYSMLSGMRAHILRRNN+YQFIVTINSKNYGC 
Sbjct  61   DDWQIERFQQSIQDDKISFTIQTDHSEKYSMLSGMRAHILRRNNNYQFIVTINSKNYGCS  120

Query  121  LDNTDINWCGIVYLLNNMTVNDNANDVAVTESYKPIWNWKISQYNVSDIKFETIIKPQFA  180
            LDNTDINWC IVYLLNNMTVNDNANDVAVTESYKPIWNWKISQYNVSDIKFET+IKPQFA
Sbjct  121  LDNTDINWCSIVYLLNNMTVNDNANDVAVTESYKPIWNWKISQYNVSDIKFETMIKPQFA  180

Query  181  DRIYFSNCSPVDPTSTRPTYFGDTDGSVGAVLYALFATGHLGIMAEGENFLSQLLNIEDE  240
            DRIYFSNC PVDPTSTRPTYFGDTDGSVGAVL+ALFATGHLGIMAEGENFLSQLLNIEDE
Sbjct  181  DRIYFSNCLPVDPTSTRPTYFGDTDGSVGAVLFALFATGHLGIMAEGENFLSQLLNIEDE  240

Query  241  VLNVLLRENFNEQVDTNVNTIISILNRRDIILESLQPYLVINKDAVTPCTFLGDQTGDRF  300
            VLNVLLRENFNEQ++TNVNTIISILNRRDIILESLQPYLVINKDAVTPCTFLGDQTGDRF
Sbjct  241  VLNVLLRENFNEQLNTNVNTIISILNRRDIILESLQPYLVINKDAVTPCTFLGDQTGDRF  300

Query  301  SNICGDQFIIDLLKRIMSINDNVHVLAGNHETNCNGNYMQNFTRMKPLDEDTYDGIKDYP  360
            SNICGDQFIIDLLKRIMSIN+NVHVLAGNHETNCNGNYMQNFTRMKPLDEDTY GIKDYP
Sbjct  301  SNICGDQFIIDLLKRIMSINENVHVLAGNHETNCNGNYMQNFTRMKPLDEDTYSGIKDYP  360

Query  361  VCFYDSKYKIMANHHGITFDDQRKRYIIGPITVSIDEMTNALDPVELAAIINKKHHTIIN  420
            VCFYD KYKIMANHHGITFDDQRKRYIIGPITVSIDEMTNALDPVELAAIINKKHH IIN
Sbjct  361  VCFYDPKYKIMANHHGITFDDQRKRYIIGPITVSIDEMTNALDPVELAAIINKKHHAIIN  420

Query  421  SKKFKTSRAISCRSFNRYFSVSTDYRPKLEALLACSQMLGINQVVAHNGNGGRECIGETG  480
             KKFKTSRAISCRSFNRYFSVSTDYRPKLEALLACSQMLGINQVVAHNGNGGRE IGETG
Sbjct  421  GKKFKTSRAISCRSFNRYFSVSTDYRPKLEALLACSQMLGINQVVAHNGNGGRERIGETG  480

Query  481  TVLGLNARDSKHTGRMFSMHNCQINPSAGPEITTPWKSYQHEKNRNGLMPLIRRRTMLQL  540
            TVLGLNARDSKH GRMFSMHNCQINP AGPEITTPWKSYQHEKNRNGLMPLIRRRTMLQL
Sbjct  481  TVLGLNARDSKHAGRMFSMHNCQINPGAGPEITTPWKSYQHEKNRNGLMPLIRRRTMLQL  540


>P37629 Putative uncharacterized protein YhiL [Escherichia coli 
(strain K12)]
Length=535

 Score = 243 bits (620),  Expect = 1e-77
 Identities = 150/446 (34%), Positives = 228/446 (51%), Gaps = 41/446 (9%)

Query  60   VDDWQIERFQQSIQDDKISFTIQTDYSEKYSMLSGMRAHILRRNNHYQFIVTINSKNYGC  119
            +D  +  RF  +  D  I FTI  D +    + S +   +  +  +Y     INS     
Sbjct  90   IDIQEYNRFADNTTDTFI-FTIIPDNNHVLKLSSPITVTVECKGGYY----FINSSG---  141

Query  120  PLDNTDINWCGIVYLLNNMTVNDNANDVAVTESYKPIWNWKISQYNVSDIKFETIIKPQF  179
              D +DI     +Y ++ +++        ++ ++KP W W +S+   +  KF++ +K  F
Sbjct  142  --DKSDI-----IYKVDGLSIIARNFFTLLSGNFKPDWRWDVSKETFTKEKFDSYVKSVF  194

Query  180  ADRIYFSNCSPVDPTSTRPTYFGDTDGSVGAVLYALFATGHLGIMAEGENFLSQLLNIED  239
            +   ++  C  ++P +    YFGDTDG VGAVLYAL  +GH+GI  +G + L +LL  E+
Sbjct  195  SKIDFYKQCGVINPQNANTAYFGDTDGRVGAVLYALLVSGHIGIREKGWSLLCELLKHEE  254

Query  240  EVLNVLLRENFNEQVDTNVNTIISILNRRDIILESLQPYLVINKDAVTPCTFLGDQTGDR  299
               +    +N     D        +LN RD+IL  L  ++ +  DA+TPC FLGD TGDR
Sbjct  255  MASSAYKHKNNKVLYD--------LLNTRDMILNELHQHVFLKDDAITPCIFLGDHTGDR  306

Query  300  FSNICGDQFIIDLLKRIMS--------INDNVHVLAGNHETNCNGNYMQNFTRMKPLDED  351
            FS I GD++I+ LL  + +        IN NV VLAGNHE N NGNY       K    D
Sbjct  307  FSTIFGDKYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINFNGNYTARLANHKLSAGD  366

Query  352  TYDGIKDYPVCFYDSKYKIMANHHGITFDDQRKRYIIGPITVSIDEMTNALDPVELAAII  411
            TY+ IK   VC YDS+ +++ +HHGI  D+++K Y +G + V  ++M N  DP ELA I 
Sbjct  367  TYNLIKTLDVCNYDSERQVLTSHHGIIRDEEKKCYCLGALQVPFNQMKNPTDPEELANIF  426

Query  412  NKKHHTIINSKKFKTSRAISCRS---FNRYFSVSTDYRPKLEALLACSQMLG-------I  461
            NKKH   ++   F   R+ + +    +  YF  +TD+RP  E +  C + L        I
Sbjct  427  NKKHKEHMDDPLFHLIRSNTLKPTPVYANYFDNTTDFRPARERIFICGETLKGEDPSKYI  486

Query  462  NQVVAHNGNGGRECIGETGTVLGLNA  487
             Q   H+G G          ++GLN+
Sbjct  487  RQKYGHHGPGVDHNQQFDNGIMGLNS  512


 Score = 18.9 bits (37),  Expect = 1.0
 Identities = 7/34 (21%), Positives = 17/34 (50%), Gaps = 0/34 (0%)

Query  411  INKKHHTIINSKKFKTSRAISCRSFNRYFSVSTD  444
            +N + H +     + +  +I  + +NR+   +TD
Sbjct  71   VNDRSHQMEKVWFYNSEPSIDIQEYNRFADNTTD  104


 Score = 17.3 bits (33),  Expect = 3.1
 Identities = 32/141 (23%), Positives = 58/141 (41%), Gaps = 13/141 (9%)

Query  131  IVYLLNN--MTVNDNANDVAVTESYKPIWNWKISQYN-VSDIKFETIIKPQFADRIY-FS  186
            I+Y L +    VND ++ +     Y    +  I +YN  +D   +T I     D  +   
Sbjct  60   IIYFLQHGHWKVNDRSHQMEKVWFYNSEPSIDIQEYNRFADNTTDTFIFTIIPDNNHVLK  119

Query  187  NCSPVDPT--STRPTYFGDTDGSVGAVLYALFATGHLGIMAEGENFLSQLL-NIEDEVLN  243
              SP+  T       YF ++ G    ++Y +      G+     NF + L  N + +   
Sbjct  120  LSSPITVTVECKGGYYFINSSGDKSDIIYKVD-----GLSIIARNFFTLLSGNFKPDWRW  174

Query  244  VLLRENF-NEQVDTNVNTIIS  263
             + +E F  E+ D+ V ++ S
Sbjct  175  DVSKETFTKEKFDSYVKSVFS  195


 Score = 16.5 bits (31),  Expect = 5.4
 Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 0/33 (0%)

Query  505  NPSAGPEITTPWKSYQHEKNRNGLMPLIRRRTM  537
            NP+   E+   +     E   + L  LIR  T+
Sbjct  415  NPTDPEELANIFNKKHKEHMDDPLFHLIRSNTL  447



Lambda      K        H        a         alpha
   0.321    0.136    0.409    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 498495


  Database: 15f074669d02bbc80b9a02a7caf22ad7.SwissProt.fasta
    Posted date:  May 31, 2024  4:52 AM
  Number of letters in database: 1,075
  Number of sequences in database:  2



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40