BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eb3bec7767c0e842934f980415057f2f.SwissProt.fasta
15 sequences; 6,676 total letters
Query= Z4804
Length=447
Score E
Sequences producing significant alignments: (Bits) Value
P0AC97 Low-affinity gluconate transporter [Escherichia coli O157:H7] 864 0.0
P0AC96 Low-affinity gluconate transporter [Escherichia coli (stra... 864 0.0
Q9ZIJ1 Gluconate permease [Pseudomonas aeruginosa (strain ATCC 15... 344 4e-118
P39344 Gnt-II system L-idonate transporter [Escherichia coli (str... 313 2e-106
P12012 Gluconate permease [Bacillus subtilis (strain 168)] 311 3e-105
P39835 High-affinity gluconate transporter [Escherichia coli (str... 303 2e-102
P46832 Gluconate permease [Bacillus licheniformis] 301 3e-101
P39357 Uncharacterized permease YjhF [Escherichia coli (strain K12)] 288 3e-96
Q9Z670 Gluconate permease [Zymomonas mobilis subsp. mobilis (stra... 280 3e-93
O31862 Uncharacterized permease YojA [Bacillus subtilis (strain 1... 268 8e-89
Q46892 Inner membrane permease YgbN [Escherichia coli (strain K12)] 264 7e-87
A0A0H2VAP9 D-serine transporter DsdX [Escherichia coli O6:H1 (str... 246 2e-80
P08555 D-serine transporter DsdX [Escherichia coli (strain K12)] 245 7e-80
P0AC94 High-affinity gluconate transporter [Escherichia coli (str... 234 2e-75
P42308 Citrate transporter [Bacillus subtilis (strain 168)] 21.6 0.74
>P0AC97 Low-affinity gluconate transporter [Escherichia coli O157:H7]
Length=446
Score = 864 bits (2233), Expect = 0.0
Identities = 445/446 (99%), Positives = 446/446 (100%), Gaps = 0/446 (0%)
Query 1 VTTLTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSGMPLDKIAATMEKGMGG 60
+TTLTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSGMPLDKIAATMEKGMGG
Sbjct 1 MTTLTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSGMPLDKIAATMEKGMGG 60
Query 61 TLGFLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEV 120
TLGFLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEV
Sbjct 61 TLGFLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEV 120
Query 121 AIVLLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMIL 180
AIVLLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMIL
Sbjct 121 AIVLLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMIL 180
Query 181 IGLCAAIPGMIIAGPLWGNFISRYVELHIPDDISEPHLGEGKMPSFGFSLSLILLPLVLV 240
IGLCAAIPGMIIAGPLWGNFISRYVELHIPDDISEPHLGEGKMPSFGFSLSLILLPLVLV
Sbjct 181 IGLCAAIPGMIIAGPLWGNFISRYVELHIPDDISEPHLGEGKMPSFGFSLSLILLPLVLV 240
Query 241 GLKTIAARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYGLAMRQGMPKDKVMEICGHAL 300
GLKTIAARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYGLAMRQGMPKDKVMEICGHAL
Sbjct 241 GLKTIAARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYGLAMRQGMPKDKVMEICGHAL 300
Query 301 QPAGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITCFVLAAAVRIIQGSATV 360
QPAGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITCFVLAAAVRIIQGSATV
Sbjct 301 QPAGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITCFVLAAAVRIIQGSATV 360
Query 361 ACLTAVGLVMPVIEQLNYSGAQMAALSICIAGGSIVVSHVNDAGFWLFGKFTGATEAETL 420
ACLTAVGLVMPVIEQLNYSGAQMAALSICIAGGSIVVSHVNDAGFWLFGKFTGATEAETL
Sbjct 361 ACLTAVGLVMPVIEQLNYSGAQMAALSICIAGGSIVVSHVNDAGFWLFGKFTGATEAETL 420
Query 421 KTWTMMETILGTVGAIVGMIAFQLLS 446
KTWTMMETILGTVGAIVGMIAFQLLS
Sbjct 421 KTWTMMETILGTVGAIVGMIAFQLLS 446
>P0AC96 Low-affinity gluconate transporter [Escherichia coli (strain
K12)]
Length=446
Score = 864 bits (2233), Expect = 0.0
Identities = 445/446 (99%), Positives = 446/446 (100%), Gaps = 0/446 (0%)
Query 1 VTTLTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSGMPLDKIAATMEKGMGG 60
+TTLTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSGMPLDKIAATMEKGMGG
Sbjct 1 MTTLTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSGMPLDKIAATMEKGMGG 60
Query 61 TLGFLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEV 120
TLGFLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEV
Sbjct 61 TLGFLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEV 120
Query 121 AIVLLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMIL 180
AIVLLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMIL
Sbjct 121 AIVLLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMIL 180
Query 181 IGLCAAIPGMIIAGPLWGNFISRYVELHIPDDISEPHLGEGKMPSFGFSLSLILLPLVLV 240
IGLCAAIPGMIIAGPLWGNFISRYVELHIPDDISEPHLGEGKMPSFGFSLSLILLPLVLV
Sbjct 181 IGLCAAIPGMIIAGPLWGNFISRYVELHIPDDISEPHLGEGKMPSFGFSLSLILLPLVLV 240
Query 241 GLKTIAARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYGLAMRQGMPKDKVMEICGHAL 300
GLKTIAARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYGLAMRQGMPKDKVMEICGHAL
Sbjct 241 GLKTIAARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYGLAMRQGMPKDKVMEICGHAL 300
Query 301 QPAGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITCFVLAAAVRIIQGSATV 360
QPAGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITCFVLAAAVRIIQGSATV
Sbjct 301 QPAGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITCFVLAAAVRIIQGSATV 360
Query 361 ACLTAVGLVMPVIEQLNYSGAQMAALSICIAGGSIVVSHVNDAGFWLFGKFTGATEAETL 420
ACLTAVGLVMPVIEQLNYSGAQMAALSICIAGGSIVVSHVNDAGFWLFGKFTGATEAETL
Sbjct 361 ACLTAVGLVMPVIEQLNYSGAQMAALSICIAGGSIVVSHVNDAGFWLFGKFTGATEAETL 420
Query 421 KTWTMMETILGTVGAIVGMIAFQLLS 446
KTWTMMETILGTVGAIVGMIAFQLLS
Sbjct 421 KTWTMMETILGTVGAIVGMIAFQLLS 446
>Q9ZIJ1 Gluconate permease [Pseudomonas aeruginosa (strain ATCC
15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C
/ PRS 101 / PAO1)]
Length=450
Score = 344 bits (882), Expect = 4e-118
Identities = 178/444 (40%), Positives = 276/444 (62%), Gaps = 9/444 (2%)
Query 6 LVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSGMPLDKIAATMEKGMGGTLGFL 65
L+L A+ +++ L+ L+ + ++H F+AL++ + GL SGMP++KI + + G GG LGF+
Sbjct 10 LLLDALVTIIGLIVLITRFKVHPFIALIIAAGFLGLTSGMPVEKIVKSFQDGFGGVLGFV 69
Query 66 AVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEVAIVLL 125
V++ALG M GK++ ++G DQIA ++++FG R H+++ LA + +PLFFE+ +LL
Sbjct 70 GVILALGTMLGKLMADSGGADQIARTLIRAFGKERVHWSMMLAAFLVGIPLFFEIGFILL 129
Query 126 ISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMILIGLCA 185
I + F +AR +G +L+K+ IPL AG++A + P P P+L AD G IL GL
Sbjct 130 IPLVFIVARRSGVSLIKIGIPLLAGLSAVHGLVPPHPGPLLAIGVFGADIGKTILYGLIV 189
Query 186 AIPGMIIAGPLWGNFISRYVELHIPDDISEPHLGEGK---MPSFGFSLSLILLPLVLVGL 242
A+P IAGPL+G +SRY+ ++ E E + +PSFG +L+ +LLP+ L+ L
Sbjct 190 ALPTAAIAGPLFGALVSRYIPGTPSAELVEQIAHEPETQDLPSFGVTLATVLLPVFLMLL 249
Query 243 KTIAARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYGLAMRQGMPKDKVMEICGHALQP 302
KT A P+G W + IGHP +A+L+A LVA+Y +G K++ + +L P
Sbjct 250 KTFADVAFPDGHAFRAWMDMIGHPISALLLALLVALYTFGYARGFDSKKILRLLDQSLAP 309
Query 303 AGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITCFVLAAAVRIIQGSATVAC 362
I+++IGAGG FKQ+LV SGVG +G + + +++AA +RI GSATVA
Sbjct 310 TAAIVMIIGAGGGFKQMLVASGVGDVIGHLAVNAQISPILLAWLVAAVIRIATGSATVAT 369
Query 363 LTAVGLVMPVIEQLNYSGAQMAALSICIAGGSIVVSHVNDAGFWLFGKFTGATEAETLKT 422
+T G+V+PVI+ + G L + GS+++SHVNDAGFWL ++ + +ET KT
Sbjct 370 ITGAGIVVPVIDLI--PGVNRELLVLATGAGSLILSHVNDAGFWLVKQYFNMSVSETFKT 427
Query 423 WTMMETILGTVGAIVGMIAFQLLS 446
WT METIL ++VG++ LLS
Sbjct 428 WTAMETIL----SVVGLVFILLLS 447
>P39344 Gnt-II system L-idonate transporter [Escherichia coli
(strain K12)]
Length=439
Score = 313 bits (803), Expect = 2e-106
Identities = 162/439 (37%), Positives = 270/439 (62%), Gaps = 7/439 (2%)
Query 4 LTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSGMPLDKIAATMEKGMGGTLG 63
+ L++ A G V LLL L++ +++ F+AL++V+ G GM + +++ G+G TLG
Sbjct 1 MPLIIIAAG-VALLLILMIGFKVNGFIALVLVAAVVGFAEGMDAQAVLHSIQNGIGSTLG 59
Query 64 FLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEVAIV 123
LA+++ GAM GK++ +TGA +IA ++ +FG R +A+ + GLV L +FFEV V
Sbjct 60 GLAMILGFGAMLGKLISDTGAAQRIATTLIATFGKKRVQWALVITGLVVGLAMFFEVGFV 119
Query 124 LLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMILIGL 183
LL+ + F++ +G L+ + +P+ A ++ FL P P P +A+ A+ G +L G
Sbjct 120 LLLPLVFTIVASSGLPLLYVGVPMVAALSVTHCFLPPHPGPTAIATIFEANLGTTLLYGF 179
Query 184 CAAIPGMIIAGPLWGNFISRYVELHIPDDISEPHL-GEGKMPSFGFSLSLILLPLVLVGL 242
IP +I+AGPL+ ++R+ E P+ + PHL E +MPSF S+ ++P++L+ +
Sbjct 180 IITIPTVIVAGPLFSKLLTRF-EKAPPEGLFNPHLFSEEEMPSFWNSIFAAVIPVILMAI 238
Query 243 KTIAARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYGLAMRQGMPKDKVMEICGHALQP 302
+ +P+ +T +FEF+G+P A+ +A ++AI+ L R G +++M+I G ++
Sbjct 239 AAVCEITLPKTNTVRLFFEFVGNPAVALFIAIVIAIFTLGRRNGRTIEQIMDIIGDSIGA 298
Query 303 AGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITCFVLAAAVRIIQGSATVAC 362
+I+ +I GG FKQVLVDSGVG + +TG L + C+ +AA +RI GSATVA
Sbjct 299 IAMIVFIIAGGGAFKQVLVDSGVGHYISHLMTGTTLSPLLMCWTVAALLRIALGSATVAA 358
Query 363 LTAVGLVMPVIEQLNYSGAQMAALSICIAGGSIVVSHVNDAGFWLFGKFTGATEAETLKT 422
+T G+V+P+I N + A A + + GS++ SHVND GFWLF + T ETL+T
Sbjct 359 ITTAGVVLPII---NVTHADPALMVLATGAGSVIASHVNDPGFWLFKGYFNLTVGETLRT 415
Query 423 WTMMETILGTVGAIVGMIA 441
WT+MET++ +G ++G++A
Sbjct 416 WTVMETLISIMG-LLGVLA 433
>P12012 Gluconate permease [Bacillus subtilis (strain 168)]
Length=448
Score = 311 bits (796), Expect = 3e-105
Identities = 161/443 (36%), Positives = 265/443 (60%), Gaps = 18/443 (4%)
Query 4 LTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSGMPLDKIAATMEKGMGGTLG 63
+ L++ A+G +L LLFL+M +++ F++L+VVS G L GMP DK+ +++E G+GGTLG
Sbjct 1 MPLIIVALG-ILALLFLIMGLKLNTFISLLVVSFGVALALGMPFDKVVSSIEAGIGGTLG 59
Query 64 FLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEVAIV 123
+A++ LGAM GK++ ++G +IA+ ++ FG +A+ +A + + LFFEV +V
Sbjct 60 HIALIFGLGAMLGKLIADSGGAQRIAMTLVNKFGEKNIQWAVVIASFIIGIALFFEVGLV 119
Query 124 LLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMILIGL 183
LLI + F+++R +++ L IP+ A ++ FL P P P +A + A+ G ++L G
Sbjct 120 LLIPIVFAISRELKISILFLGIPMVAALSVTHGFLPPHPGPTAIAGEYGANIGEVLLYGF 179
Query 184 CAAIPGMIIAGPLWGNFISRYVELHIPDDISEPHLGEGK------MPSFGFSLSLILLPL 237
A+P ++IAGPL+ F + V + + LG K P FG S+ +LP+
Sbjct 180 IVAVPTVLIAGPLFTKFAKKIVPASFAKNGNIASLGTQKTFNLEETPGFGISVFTAMLPI 239
Query 238 VLVGLKTI------AARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYGLAMRQGMPKDK 291
+++ + TI F G A+ IG+ TA++++ LVA+Y + +++ +P
Sbjct 240 IIMSVATIIDLLQETIGFADNGVLAF--IRLIGNASTAMIISLLVAVYTMGIKRNIPVKT 297
Query 292 VMEICGHALQPAGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITCFVLAAAV 351
VM+ C A+ G++LL+IG GG FKQVL++ GVG + + G L I +++AA +
Sbjct 298 VMDSCSTAISQIGMMLLIIGGGGAFKQVLINGGVGDYVADLFKGTALSPIILAWLIAAIL 357
Query 352 RIIQGSATVACLTAVGLVMPVIEQLNYSGAQMAALSICIAGGSIVVSHVNDAGFWLFGKF 411
RI GSATVA L+ GLV+P+ L +S +A + + GS++ SHVNDAGFW+F ++
Sbjct 358 RISLGSATVAALSTTGLVIPL---LGHSDVNLALVVLATGAGSVIASHVNDAGFWMFKEY 414
Query 412 TGATEAETLKTWTMMETILGTVG 434
G + ET TWT++ETI+ G
Sbjct 415 FGLSMKETFATWTLLETIISVAG 437
>P39835 High-affinity gluconate transporter [Escherichia coli
(strain K12)]
Length=438
Score = 303 bits (776), Expect = 2e-102
Identities = 160/443 (36%), Positives = 265/443 (60%), Gaps = 7/443 (2%)
Query 4 LTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSGMPLDKIAATMEKGMGGTLG 63
+ LV+ A+G V+LLL L+++ +M+ F+AL++V++ GL GMPLDK+ +++ G+GGTLG
Sbjct 1 MPLVIVAIG-VILLLLLMIRFKMNGFIALVLVALAVGLMQGMPLDKVIGSIKAGVGGTLG 59
Query 64 FLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEVAIV 123
LA+++ GAM GK+L + G +IA ++ FG +A+ L G LF+EV V
Sbjct 60 SLALIMGFGAMLGKMLADCGGAQRIATTLIAKFGKKHIQWAVVLTGFTVGFALFYEVGFV 119
Query 124 LLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMILIGL 183
L++ + F++A L+ + +P+ A ++ FL P P P +A+ NAD G +L G
Sbjct 120 LMLPLVFTIAASANIPLLYVGVPMAAALSVTHGFLPPHPGPTAIATIFNADMGKTLLYGT 179
Query 184 CAAIPGMIIAGPLWGNFISRYVELHIPDDI-SEPHLGEGKMPSFGFSLSLILLPLVLVGL 242
AIP +I+AGP++ + + ++ IP+ + S E +MPSFG S+ L+P+VL+ +
Sbjct 180 ILAIPTVILAGPVYAR-VLKGIDKPIPEGLYSAKTFSEEEMPSFGVSVWTSLVPVVLMAM 238
Query 243 KTIAARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYGLAMRQGMPKDKVMEICGHALQP 302
+ IA +P+G EF+G P A L+A L+A++ + +G D++ + +++
Sbjct 239 RAIAEMILPKGHAFLPVAEFLGDPVMATLIAVLIAMFTFGLNRGRSMDQINDTLVSSIKI 298
Query 303 AGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITCFVLAAAVRIIQGSATVAC 362
++LL+IG GG FKQVLVDSGV + + + + + +AA +RI GSATVA
Sbjct 299 IAMMLLIIGGGGAFKQVLVDSGVDKYIASMMHETNISPLLMAWSIAAVLRIALGSATVAA 358
Query 363 LTAVGLVMPVIEQLNYSGAQMAALSICIAGGSIVVSHVNDAGFWLFGKFTGATEAETLKT 422
+TA G+ P+I +G + I + GS++ SHVND GFWLF ++ T ET+K+
Sbjct 359 ITAGGIAAPLIAT---TGVSPELMVIAVGSGSVIFSHVNDPGFWLFKEYFNLTIGETIKS 415
Query 423 WTMMETILGTVGAIVGMIAFQLL 445
W+M+ETI+ G +VG + ++
Sbjct 416 WSMLETIISVCG-LVGCLLLNMV 437
>P46832 Gluconate permease [Bacillus licheniformis]
Length=448
Score = 301 bits (770), Expect = 3e-101
Identities = 158/441 (36%), Positives = 263/441 (60%), Gaps = 14/441 (3%)
Query 4 LTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSGMPLDKIAATMEKGMGGTLG 63
+ L++ A+G V LLL L+M +++ F++L++VS G L GMPLD I T+E+G+GGTLG
Sbjct 1 MPLLIVAIGIVALLL-LIMGLKLNTFVSLIIVSFGVALALGMPLDDIVKTIEEGLGGTLG 59
Query 64 FLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEVAIV 123
+A++ LGAM G+++ ++G +IA+ ++ FG +A+ +A + + LFFEVA+V
Sbjct 60 HIALIFGLGAMLGRLIADSGGAQRIAMTLVNKFGEENIQWAVVIASFIIGVALFFEVALV 119
Query 124 LLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMILIGL 183
LLI + F++++ ++ L IP+ A ++ FL P P P +A ++ A+ G ++L G+
Sbjct 120 LLIPIVFAISKELEISISYLGIPMTAALSVTHGFLPPHPGPTAIAGELGANIGEVLLYGI 179
Query 184 CAAIPGMIIAGPLWGNFISRYVELHIPDDISEPHLGEGK------MPSFGFSLSLILLPL 237
AIP +++AGPL+ + V S LGE K P FG S+ +LP+
Sbjct 180 IVAIPTVLLAGPLFTKLAKKIVPQSFEKMGSIASLGEQKTFKLEETPGFGISVFTAMLPV 239
Query 238 VLVGLKTIAARFVP----EGSTAYEWFEFIGHPFTAILVACLVAIYGLAMRQGMPKDKVM 293
+++ + T+ ++ IG+ T+++++ LVAIY + + + +P +VM
Sbjct 240 IIMSISTVITLIQETMGLADNSLLAAVRLIGNASTSMVISLLVAIYTMGIARKIPIKQVM 299
Query 294 EICGHALQPAGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITCFVLAAAVRI 353
+ C A+ G++LL+IG GG FKQVL++ GVG + E G + + +V+AA +RI
Sbjct 300 DSCSTAITQIGMMLLIIGGGGAFKQVLINGGVGDYVAELFKGTAMSPILLAWVIAAILRI 359
Query 354 IQGSATVACLTAVGLVMPVIEQLNYSGAQMAALSICIAGGSIVVSHVNDAGFWLFGKFTG 413
GSATVA L+ GLV+P++ Q S +A + + GS++ SHVNDAGFW+F ++ G
Sbjct 360 SLGSATVAALSTTGLVLPMLGQ---SDVNLALVVLATGAGSVIASHVNDAGFWMFKEYFG 416
Query 414 ATEAETLKTWTMMETILGTVG 434
+ ET TWT++ETI+ G
Sbjct 417 LSMKETFATWTLLETIIAVAG 437
>P39357 Uncharacterized permease YjhF [Escherichia coli (strain
K12)]
Length=449
Score = 288 bits (736), Expect = 3e-96
Identities = 150/449 (33%), Positives = 255/449 (57%), Gaps = 12/449 (3%)
Query 7 VLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSGMPLDKIAATMEKGMGGTLGFLA 66
++ V + LLL L +K +++ F++L++VS+ + SGM L K+ ++E G+GGTLG +
Sbjct 3 LIIVVAGIALLLLLTIKIKLNTFVSLIIVSIAVAIASGMDLSKVVTSVESGLGGTLGHIG 62
Query 67 VVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEVAIVLLI 126
++ G M G++L + G +IA+ ML FG ++ +A+ + + + LFFEV ++LL+
Sbjct 63 LIFGFGVMLGRLLADAGGAQRIALTMLNYFGKNKLDWAVVCSAFIVGIALFFEVGLILLV 122
Query 127 SVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMILIGLCAA 186
+ F++AR + + + +P+ +G+ A FL P P P ++A + AD G +++ G+
Sbjct 123 PILFAIAREAKISPMFMCVPMLSGLLVAHGFLPPHPGPTVIAREYGADVGLVLIYGIIVG 182
Query 187 IPGMIIAGPLWGNFISRYV------ELHIPDDISEPHLGEGKMPSFGFSLSLILLPLVLV 240
IP I+ GP+ F R + E +I + E +MP FG S +LP++L+
Sbjct 183 IPTFILCGPVLNKFCQRIIPDAFKKEGNIASLGATRRFSESEMPGFGISFLTAMLPVILM 242
Query 241 GLKTIA----ARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYGLAMRQGMPKDKVMEIC 296
+ TI A+ + Y F+G+ A+L++ L AIY + + +G +M+ C
Sbjct 243 AVVTIIQMTHAKSAADSGLFYNVILFLGNSTIAMLISLLFAIYTMGLGRGKTIPDLMDSC 302
Query 297 GHALQPAGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITCFVLAAAVRIIQG 356
G A+ +LL+IG GG FKQVL+DSGVG + ++GM + + + +AA +RI G
Sbjct 303 GKAIAGIAGLLLIIGGGGAFKQVLIDSGVGQYISTLVSGMDINPILMAWGVAAFLRICLG 362
Query 357 SATVACLTAVGLVMPVIEQLNYSGAQMAALSICIAGGSIVVSHVNDAGFWLFGKFTGATE 416
SATVA ++ GLV+P++ + +A +++ GS + SHVNDA FW+ F G T
Sbjct 363 SATVAAISTAGLVIPLLAV--HPNTNLALITLATGAGSCICSHVNDASFWMIKDFFGLTT 420
Query 417 AETLKTWTMMETILGTVGAIVGMIAFQLL 445
ETL +WT+M T+L G I ++A +L
Sbjct 421 KETLLSWTLMSTLLSISGLIFILLASLVL 449
>Q9Z670 Gluconate permease [Zymomonas mobilis subsp. mobilis (strain
ATCC 31821 / ZM4 / CP4)]
Length=451
Score = 280 bits (716), Expect = 3e-93
Identities = 154/445 (35%), Positives = 255/445 (57%), Gaps = 8/445 (2%)
Query 6 LVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSGMPLDKIAATMEKGMGGTLGFL 65
L+L A+ S+++L+ ++ K R++ F++L++VS+G G +GMPL K+ + + G+G +G
Sbjct 8 LLLYALASIIILILMIAKWRLNPFVSLILVSIGMGAVTGMPLTKVLSAFQDGLGSGIGST 67
Query 66 AVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEVAIVLL 125
A V+ALG M GKIL E+G ++IA +K FG H+A+ + + +P+F++V +LL
Sbjct 68 ASVIALGTMLGKILAESGGAERIATTTIKIFGPKLIHWAMLVIAFIVGIPIFYQVGFILL 127
Query 126 ISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMILIGLCA 185
I + F++ R +G +LVKL IPL AG+A L P P M ++AD G IL G
Sbjct 128 IPLVFTLGRASGISLVKLTIPLCAGLATVHGLLPPHPGSMQCVEMLHADVGKTILYGFIV 187
Query 186 AIPGMIIAGPLWGNFISRYVELHIPDDISEPHLG----EGKMPSFGFSLSLILLPLVLVG 241
P I+AGPL+GN+I+ ++L + +E G + +P F ++ ILLP++L+
Sbjct 188 GFPAAILAGPLYGNWITPRIQLPAHNPFAESLEGSSDQDKNLPGFWLTIFSILLPVLLMV 247
Query 242 LKTIAARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYGLAMRQGMPKDKVMEICGHALQ 301
+ A F+P G+ + F+G P ++L+A LV++ L +G +++ L
Sbjct 248 FSSGANIFLPHGNNIRAFMNFMGDPVVSLLIALLVSMVTLGFWRGFSSADLLKFTNDCLG 307
Query 302 PAGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITCFVLAAAVRIIQGSATVA 361
P ILL+IGAGG F ++L +GV A+ + M L + F++AA +R+ GS TVA
Sbjct 308 PTAGILLLIGAGGGFSEILYRAGVSNAMADLSHVMHLSPIMLGFIIAAVIRVATGSQTVA 367
Query 362 CLTAVGLVMPVI-EQLNYSGAQMAALSICIAGGSIVVSHVNDAGFWLFGKFTGATEAETL 420
+ G++ P+I + ++ LS I GS ++SHVND FWL ++ T ++T
Sbjct 368 MSMSGGMLAPIIFSTPGFHSPELLVLS--IGAGSSILSHVNDGAFWLLKEYLNMTVSQTF 425
Query 421 KTWTMMETILGTVGAIVGMIAFQLL 445
KTWT+ TI ++ A++ Q L
Sbjct 426 KTWTVSVTI-ASIAALILTFGLQAL 449
>O31862 Uncharacterized permease YojA [Bacillus subtilis (strain
168)]
Length=444
Score = 268 bits (686), Expect = 8e-89
Identities = 149/438 (34%), Positives = 245/438 (56%), Gaps = 12/438 (3%)
Query 4 LTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSGMPLDKIAATMEKGMGGTLG 63
+ +++ AVG VL+LLFL++K +++ F++L+VVS + GM ++KI ++E G+GG LG
Sbjct 1 MPILIVAVG-VLILLFLIIKVKLNTFVSLIVVSFLVAIGLGMDINKIVLSIETGIGGQLG 59
Query 64 FLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEVAIV 123
LA+V LGAM G+++ + G +IA+ ++ FG R A+ +A + + LFFEV +V
Sbjct 60 HLALVFGLGAMLGRLVSDAGGGYRIAITLIDKFGRKRIQAAVVVASFIIGIALFFEVGLV 119
Query 124 LLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMILIGL 183
LLI + +++A+ + L IP+ A + FL P PAP ++ A G ++L G+
Sbjct 120 LLIPIVYAIAKELKMPFLYLGIPMAAALNVTHGFLPPHPAPTAISVAYGAHIGQVLLFGI 179
Query 184 CAAIPGMIIAGPLWGNFISRYVELHIPDDISEPHLGEGK------MPSFGFSLSLILLPL 237
A+P +IAGPL+ F + + LG K P F S L P+
Sbjct 180 IIAVPTTVIAGPLFNKFAMKRFPGAYQKHGNLSGLGPRKEFQLDETPGFAISAVTSLFPV 239
Query 238 VLVGLKTIAARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYGLAMRQGMPKDKVMEICG 297
+ + + TI + + E S + EFIG P TA+L++ L+A+Y + + + ++
Sbjct 240 IFMAMATIFSLLLSEHSKGKDIIEFIGTPGTAMLISLLLALYTMGYARKISMQEIGRSIS 299
Query 298 HALQPAGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITCFVLAAAVRIIQGS 357
++ ++LL+IG GG FKQVL+D GVG + + + + +AA +R+ GS
Sbjct 300 ESISQIAMMLLIIGGGGAFKQVLIDGGVGDYVADFFRQTNMSPLFVAWTIAAVLRLCLGS 359
Query 358 ATVACLTAVGLVMPVIEQLNYSGAQMAALSICIAG-GSIVVSHVNDAGFWLFGKFTGATE 416
ATVA LT G+ P++E +G+ AL + G GS++ HVNDAGFW+ +F G +
Sbjct 360 ATVAALTTAGMAAPLME----AGSVNPALMVLATGAGSVIACHVNDAGFWMVKEFFGLSM 415
Query 417 AETLKTWTMMETILGTVG 434
ET +TWT++ T+L G
Sbjct 416 KETFQTWTLLTTVLSVTG 433
>Q46892 Inner membrane permease YgbN [Escherichia coli (strain
K12)]
Length=454
Score = 264 bits (674), Expect = 7e-87
Identities = 146/453 (32%), Positives = 250/453 (55%), Gaps = 23/453 (5%)
Query 1 VTTLTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSGMPLDKIAATMEKGMGG 60
++T+TL+ A+ V++LL LV+KA++ F+AL++VS+ L +G+P ++ M GMGG
Sbjct 1 MSTITLLCIALAGVIMLLLLVIKAKVQPFVALLLVSLLVALAAGIPAGEVGKVMIAGMGG 60
Query 61 TLGFLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEV 120
LG + +++ LGAM G+++ +G + +A + G R A+ LA +P+FF+V
Sbjct 61 VLGSVTIIIGLGAMLGRMIEHSGGAESLANYFSRKLGDKRTIAALTLAAFFLGIPVFFDV 120
Query 121 AIVLLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMIL 180
++L + + A+ + +K +P+ + + P P P+ A ++AD GW+ +
Sbjct 121 GFIILAPIIYGFAKVAKISPLKFGLPVAGIMLTVHVAVPPHPGPVAAAGLLHADIGWLTI 180
Query 181 IGLCAAIPGMIIAGPLWGNFISRYV---ELHIPDDISE-----PHLGEG--------KMP 224
IG+ +IP ++ G F ++ + + + ++ E P EG P
Sbjct 181 IGIAISIPVGVV-----GYFAAKIINKRQYAMSVEVLEQMQLAPASEEGATKLSDKINPP 235
Query 225 SFGFSLSLILLPLVLVGLKTIAARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYGLAMR 284
SLI++P+ ++ T++A +P + IG P A+++A ++A + LA+R
Sbjct 236 GVALVTSLIVIPIAIIMAGTVSATLMPPSHPLLGTLQLIGSPMVALMIALVLAFWLLALR 295
Query 285 QGMPKDKVMEICGHALQPAGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITC 344
+G +I G AL A +++LV GAGGVF +VLV+SGVG AL L + LP+
Sbjct 296 RGWSLQHTSDIMGSALPTAAVVILVTGAGGVFGKVLVESGVGKALANMLQMIDLPLLPAA 355
Query 345 FVLAAAVRIIQGSATVACLTAVGLVMPVIEQLNYSGAQMAALSICIAGGSIVVSHVNDAG 404
F+++ A+R QGSATVA LT GL+ + LN + L+ C G + SH+ND+G
Sbjct 356 FIISLALRASQGSATVAILTTGGLLSEAVMGLNPIQCVLVTLAACF--GGLGASHINDSG 413
Query 405 FWLFGKFTGATEAETLKTWTMMETILGTVGAIV 437
FW+ K+ G + A+ LKTWT++ TILG G ++
Sbjct 414 FWIVTKYLGLSVADGLKTWTVLTTILGFTGFLI 446
>A0A0H2VAP9 D-serine transporter DsdX [Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC)]
Length=445
Score = 246 bits (629), Expect = 2e-80
Identities = 154/436 (35%), Positives = 246/436 (56%), Gaps = 8/436 (2%)
Query 6 LVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSGM-PLDKIAATMEKGMGGTLGF 64
+V T + S++L++ ++K + H FLAL++ S G GM PLD + A +E G+GGTLGF
Sbjct 7 VVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGTMMGMGPLDMVNA-IESGIGGTLGF 65
Query 65 LAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEVAIVL 124
LA V+ LG + GK++ +GA ++I + + + S A + L GL+C + LF EV +VL
Sbjct 66 LAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLS-ADVIMVLVGLICGITLFVEVGVVL 124
Query 125 LISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMILIGLC 184
LI +AFS+A+ T T+L+KL IPL + A + P PA + +A+++ AD G +I+ GL
Sbjct 125 LIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALYVANKLGADIGSVIVYGLL 184
Query 185 AAIPGMIIAGPLWGNFISRYVELH-IPDDISEPHLGEGK-MPSFGFSLSLILLPLVLVGL 242
+ +I GPL+ F+ + + +P + ++ + + K +PS G +L +LLP+ L+ +
Sbjct 185 VGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLKVRDEKTLPSLGATLFTVLLPIALMLV 244
Query 243 KTIAARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYGLAMRQGMPKDKVMEICGHALQP 302
KTIA + S Y EFIG+P TA +A VA Y L +RQ M ++ +
Sbjct 245 KTIAELNMARESGLYTLLEFIGNPITATFIAVFVAYYVLGIRQHMSMGTMLTHTENGFGS 304
Query 303 AGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITCFVLAAAVRIIQGSATVAC 362
ILL+IGAGG F +L S + L L+ M + + +++A + GSATVA
Sbjct 305 IANILLIIGAGGAFNAILKSSSLADTLAVILSNMHMHPILLAWLVALILHAAVGSATVAM 364
Query 363 LTAVGLVMPVIEQLNYSGAQMAALSICIAGGSIVVSHVNDAGFWLFGKFTGATEAETLKT 422
+ A +V P++ Y ++I I G+I + V D+ FWL ++ GAT ET K
Sbjct 365 MGATAIVAPMLPL--YPDISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGATLNETFKY 422
Query 423 WTMMETILGTVGAIVG 438
+T T + +V A+ G
Sbjct 423 YT-TATFIASVIALAG 437
>P08555 D-serine transporter DsdX [Escherichia coli (strain K12)]
Length=445
Score = 245 bits (626), Expect = 7e-80
Identities = 154/436 (35%), Positives = 246/436 (56%), Gaps = 8/436 (2%)
Query 6 LVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSGM-PLDKIAATMEKGMGGTLGF 64
+V T + S++L++ ++K + H FLAL++ S G GM PLD + A +E G+GGTLGF
Sbjct 7 VVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGTMMGMGPLDMVNA-IESGIGGTLGF 65
Query 65 LAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEVAIVL 124
LA V+ LG + GK++ +GA ++I + + + S + L GL+C + LF EV +VL
Sbjct 66 LAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLS-VDVIMVLVGLICGITLFVEVGVVL 124
Query 125 LISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMILIGLC 184
LI +AFS+A+ T T+L+KL IPL + A + P PA + +A+++ AD G +I+ GL
Sbjct 125 LIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALYVANKLGADIGSVIVYGLL 184
Query 185 AAIPGMIIAGPLWGNFISRYVELH-IPDDISEPHLGEGK-MPSFGFSLSLILLPLVLVGL 242
+ +I GPL+ F+ + + +P + ++ + + K +PS G +L ILLP+ L+ +
Sbjct 185 VGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLKVRDEKTLPSLGATLFTILLPIALMLV 244
Query 243 KTIAARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYGLAMRQGMPKDKVMEICGHALQP 302
KTIA + S Y EFIG+P TA+ +A VA Y L +RQ M ++ +
Sbjct 245 KTIAELNMARESGLYILVEFIGNPITAMFIAVFVAYYVLGIRQHMSMGTMLTHTENGFGS 304
Query 303 AGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITCFVLAAAVRIIQGSATVAC 362
ILL+IGAGG F +L S + L L+ M + + +++A + GSATVA
Sbjct 305 IANILLIIGAGGAFNAILKSSSLADTLAVILSNMHMHPILLAWLVALILHAAVGSATVAM 364
Query 363 LTAVGLVMPVIEQLNYSGAQMAALSICIAGGSIVVSHVNDAGFWLFGKFTGATEAETLKT 422
+ A +V P++ Y ++I I G+I + V D+ FWL ++ GAT ET K
Sbjct 365 MGATAIVAPMLPL--YPDISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGATLNETFKY 422
Query 423 WTMMETILGTVGAIVG 438
+T T + +V A+ G
Sbjct 423 YT-TATFIASVVALAG 437
>P0AC94 High-affinity gluconate transporter [Escherichia coli
(strain K12)]
Length=447
Score = 234 bits (596), Expect = 2e-75
Identities = 135/440 (31%), Positives = 235/440 (53%), Gaps = 9/440 (2%)
Query 7 VLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSGMPLDKIAATMEKGMGGTLGFLA 66
+L V + L+L L +K ++++ +AL+V ++ G+ +GM L + TM+ G G TLG LA
Sbjct 6 ILWVVFGIGLMLVLNLKFKINSMVALLVAALSVGMLAGMDLMSLLHTMKAGFGNTLGELA 65
Query 67 VVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEVAIVLLI 126
++V GA+ GK++ ++GA QIA +L G ++ + GL+ L +F+EVA ++L
Sbjct 66 IIVVFGAVIGKLMVDSGAAHQIAHTLLARLGLRYVQLSVIIIGLIFGLAMFYEVAFIMLA 125
Query 127 SVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMILIGLCAA 186
+ +A +KL IP A A + P P P+ L + AD G + + G+
Sbjct 126 PLVIVIAAEAKIPFLKLAIPAVAAATTAHSLFPPQPGPVALVNAYGADMGMVYIYGVLVT 185
Query 187 IPGMIIAGPLWGNFISRYVELHIPDDI-SEPHLGEGKMPSFGFSLSLILLPLVLVGLKTI 245
IP +I AG + F+ +E P + ++ + +PSFG S+ + L+P +++ TI
Sbjct 186 IPSVICAGLILPKFLGN-LERPTPSFLKADQPVDMNNLPSFGVSILVPLIPAIIMISTTI 244
Query 246 AARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYGLAMRQGMPKDKVMEICGHALQPAGI 305
A ++ + + A+E FIG A+ +A +VA +G VM A++ +
Sbjct 245 ANIWLVKDTPAWEVVNFIGSSPIAMFIAMVVAFVLFGTARGHDMQWVMNAFESAVKSIAM 304
Query 306 ILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITCFVLAAAVRIIQGSATVACLTA 365
++L+IGAGGV KQ ++D+G+G +G ++ + I +++ +R+ G V+ +TA
Sbjct 305 VILIIGAGGVLKQTIIDTGIGDTIGMLMSHGNISPYIMAWLITVLIRLATGQGVVSAMTA 364
Query 366 VGLVM-----PVIEQLNYSGAQMAALSICIAGGSIVVSHVNDAGFWLFGKFTGATEAETL 420
G++ P QL G A L + A GS ++H+NDA FWLF + + +TL
Sbjct 365 AGIISAAILDPATGQL--VGVNPALLVLATAAGSNTLTHINDASFWLFKGYFDLSVKDTL 422
Query 421 KTWTMMETILGTVGAIVGMI 440
KTW ++E + VG I+ +I
Sbjct 423 KTWGLLELVNSVVGLIIVLI 442
>P42308 Citrate transporter [Bacillus subtilis (strain 168)]
Length=426
Score = 21.6 bits (44), Expect = 0.74
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 7/47 (15%)
Query 6 LVLTAVGSVLLLLFLVMKARM-----HAFLALMVVSM--GAGLFSGM 45
L +TA L++ + +K + HA AL VVSM AG+F+G+
Sbjct 251 LFMTAFAVALMVNYPNVKEQQKRISAHAGNALNVVSMVFAAGIFTGI 297
Lambda K H a alpha
0.329 0.142 0.428 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2340756
Database: eb3bec7767c0e842934f980415057f2f.SwissProt.fasta
Posted date: Jun 1, 2024 9:50 AM
Number of letters in database: 6,676
Number of sequences in database: 15
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
