BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: aba0c615ee0a7ca1be481cb8248e35bc.SwissProt.fasta
14 sequences; 7,354 total letters
Query= Z3833
Length=497
Score E
Sequences producing significant alignments: (Bits) Value
Q8XA47 Sensor histidine kinase QseE [Escherichia coli O157:H7] 925 0.0
P52101 Sensor histidine kinase GlrK [Escherichia coli (strain K12)] 922 0.0
P20169 Drug sensory protein A [Synechocystis sp. (strain PCC 6803... 101 8e-26
P23545 Alkaline phosphatase synthesis sensor protein PhoR [Bacill... 100 8e-26
P08401 Sensor protein CreC [Escherichia coli (strain K12)] 99.8 1e-25
Q1XD95 Uncharacterized sensor-like histidine kinase ycf26 [Neopyr... 98.2 7e-25
P9WGK9 Sensor histidine kinase MtrB [Mycobacterium tuberculosis (... 95.9 3e-24
P9WGK8 Sensor histidine kinase MtrB [Mycobacterium tuberculosis (... 95.5 5e-24
P59963 Sensor histidine kinase MtrB [Mycobacterium bovis (strain ... 95.5 5e-24
O34206 Alginate biosynthesis sensor protein KinB [Pseudomonas aer... 95.5 5e-24
A0QR01 Sensor-like histidine kinase SenX3 [Mycolicibacterium smeg... 92.4 2e-23
Q04943 Signal transduction histidine-protein kinase AfsQ2 [Strept... 93.2 2e-23
P9WGK5 Sensor-like histidine kinase SenX3 [Mycobacterium tubercul... 92.0 3e-23
P0A601 Sensor-like histidine kinase SenX3 [Mycobacterium bovis (s... 92.0 3e-23
>Q8XA47 Sensor histidine kinase QseE [Escherichia coli O157:H7]
Length=475
Score = 925 bits (2391), Expect = 0.0
Identities = 474/475 (99%), Positives = 475/475 (100%), Gaps = 0/475 (0%)
Query 22 LKRWPVFPRSLRQLVMLAFLLILLPLLVLAWQAWQSLNALSDQAALVNRTTLIDARRSEA 81
+KRWPVFPRSLRQLVMLAFLLILLPLLVLAWQAWQSLNALSDQAALVNRTTLIDARRSEA
Sbjct 1 MKRWPVFPRSLRQLVMLAFLLILLPLLVLAWQAWQSLNALSDQAALVNRTTLIDARRSEA 60
Query 82 MTNAALEMERSYRQYCVLDDPTLAKVYQSQRKRYSEMLDAHAGVLPDDKLYQALRQDLNN 141
MTNAALEMERSYRQYCVLDDPTLAKVYQSQRKRYSEMLDAHAGVLPDDKLYQALRQDLNN
Sbjct 61 MTNAALEMERSYRQYCVLDDPTLAKVYQSQRKRYSEMLDAHAGVLPDDKLYQALRQDLNN 120
Query 142 LAQLQCNNSGPDAAAAARLEAFASANTEMVQATRTVVFSRGQQLQREIAERGQYFGWQSL 201
LAQLQCNNSGPDAAAAARLEAFASANTEMVQATRTVVFSRGQQLQREIAERGQYFGWQSL
Sbjct 121 LAQLQCNNSGPDAAAAARLEAFASANTEMVQATRTVVFSRGQQLQREIAERGQYFGWQSL 180
Query 202 VLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLGNSVSFSGPSELRSVGQRILWLS 261
VLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLGNSVSFSGPSELRSVGQRILWLS
Sbjct 181 VLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLGNSVSFSGPSELRSVGQRILWLS 240
Query 262 ERLSWLESQRHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVSILDSSSRN 321
ERLSWLESQRHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVSILDSSSRN
Sbjct 241 ERLSWLESQRHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVSILDSSSRN 300
Query 322 LQKLIEQLLDYNRKQADSAVELDNVELAPLVETVVSAHSLPARAKMMHTDVDLKATACLA 381
LQKLIEQLLDYNRKQADSAVELDNVELAPLVETVVSAHSLPARAKMMHTDVDLKATACLA
Sbjct 301 LQKLIEQLLDYNRKQADSAVELDNVELAPLVETVVSAHSLPARAKMMHTDVDLKATACLA 360
Query 382 EPMLLMSVLDNLYSNAVHYGAESGNICLRSSLHGARVYIDVINTGTPIPQEERAMIFEPF 441
EPMLLMSVLDNLYSNAVHYGAESGNICLRSSLHGARVYIDVINTGTPIPQEERAMIFEPF
Sbjct 361 EPMLLMSVLDNLYSNAVHYGAESGNICLRSSLHGARVYIDVINTGTPIPQEERAMIFEPF 420
Query 442 FQGSHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELPSSKNTK 496
FQGSHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELPSSKNTK
Sbjct 421 FQGSHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELPSSKNTK 475
>P52101 Sensor histidine kinase GlrK [Escherichia coli (strain
K12)]
Length=475
Score = 922 bits (2382), Expect = 0.0
Identities = 472/475 (99%), Positives = 475/475 (100%), Gaps = 0/475 (0%)
Query 22 LKRWPVFPRSLRQLVMLAFLLILLPLLVLAWQAWQSLNALSDQAALVNRTTLIDARRSEA 81
+KRWPVFPRSLRQLVMLAFLLILLPLLVLAWQAWQSLNALSDQAALVNRTTLIDARRSEA
Sbjct 1 MKRWPVFPRSLRQLVMLAFLLILLPLLVLAWQAWQSLNALSDQAALVNRTTLIDARRSEA 60
Query 82 MTNAALEMERSYRQYCVLDDPTLAKVYQSQRKRYSEMLDAHAGVLPDDKLYQALRQDLNN 141
MTNAALEMERSYRQYCVLDDPTLAKVYQSQRKRYSEMLDAHAGVLPDDKLYQALRQDL+N
Sbjct 61 MTNAALEMERSYRQYCVLDDPTLAKVYQSQRKRYSEMLDAHAGVLPDDKLYQALRQDLHN 120
Query 142 LAQLQCNNSGPDAAAAARLEAFASANTEMVQATRTVVFSRGQQLQREIAERGQYFGWQSL 201
LAQLQCNNSGPDAAAAARLEAFASANTEMVQATRTVVFSRGQQLQREIAERGQYFGWQSL
Sbjct 121 LAQLQCNNSGPDAAAAARLEAFASANTEMVQATRTVVFSRGQQLQREIAERGQYFGWQSL 180
Query 202 VLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLGNSVSFSGPSELRSVGQRILWLS 261
VLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLGNSVSFSGPSELRSVGQRILWLS
Sbjct 181 VLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLGNSVSFSGPSELRSVGQRILWLS 240
Query 262 ERLSWLESQRHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVSILDSSSRN 321
ERLSWLESQRHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVSILDSSSRN
Sbjct 241 ERLSWLESQRHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVSILDSSSRN 300
Query 322 LQKLIEQLLDYNRKQADSAVELDNVELAPLVETVVSAHSLPARAKMMHTDVDLKATACLA 381
LQKLIEQLLDYNRKQADSAVEL+NVELAPLVETVVSAHSLPARAKMMHTDVDLKATACLA
Sbjct 301 LQKLIEQLLDYNRKQADSAVELENVELAPLVETVVSAHSLPARAKMMHTDVDLKATACLA 360
Query 382 EPMLLMSVLDNLYSNAVHYGAESGNICLRSSLHGARVYIDVINTGTPIPQEERAMIFEPF 441
EPMLLMSVLDNLYSNAVHYGAESGNICLRSSLHGARVYIDVINTGTPIPQEERAMIFEPF
Sbjct 361 EPMLLMSVLDNLYSNAVHYGAESGNICLRSSLHGARVYIDVINTGTPIPQEERAMIFEPF 420
Query 442 FQGSHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELPSSKNTK 496
FQGSHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELPSSKNTK
Sbjct 421 FQGSHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELPSSKNTK 475
>P20169 Drug sensory protein A [Synechocystis sp. (strain PCC
6803 / Kazusa)]
Length=663
Score = 101 bits (251), Expect = 8e-26
Identities = 67/235 (29%), Positives = 123/235 (52%), Gaps = 13/235 (6%)
Query 267 LESQRHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVSILDSSSRNLQKLI 326
L + QF+ ++SHEL+TPL +++ E L++ E+KE + + + L +L+
Sbjct 419 LNEAKSQFISNVSHELRTPLFNIKSFIETLSEFGEDLSEVERKEFLETANHETDRLSRLV 478
Query 327 EQLLDYNRKQADSAVELDNVELAPLVETVVSAHSLPARAKMMHTD--VDLKATACLAEPM 384
+LD ++ ++ +LD V+L L+E + ++ L A+ K + + +D L
Sbjct 479 NDVLDLSKLESSKIYQLDAVDLYQLIEQSLRSYQLNAKDKQLQLEKILDPDLPFALGNYD 538
Query 385 LLMSVLDNLYSNAVHYGAESGNICLRS-SLHGAR---------VYIDVINTGTPIPQEER 434
LL+ V+ NL N+ + G I +R+ LH + V +++ +TG I E++
Sbjct 539 LLLQVMTNLIGNSFKFTKAGGKIIVRAYPLHRSNLRAEDGPGLVRVEISDTGIGIDPEDQ 598
Query 435 AMIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIEL 489
A IFE F++ R ++G+GLGLSI ++ I + Q +++LV E G F +L
Sbjct 599 AAIFERFYR-VENRVHTLEGTGLGLSIVKNIIAKHQSQIHLVSEVGVGTTFWFDL 652
Score = 20.8 bits (42), Expect = 1.7
Identities = 22/101 (22%), Positives = 47/101 (47%), Gaps = 5/101 (5%)
Query 200 SLVLFLVSLVMVLL---FTRMIIG-PVKNIERMINRLGEGRSLGNSVSFSGPSELRSVGQ 255
++ +F+ VMV+L F + I P+K + + + G + ++ EL +
Sbjct 200 TIAVFISIWVMVILGAVFNALTITQPIKELLLGVKNIAAG-NFKQRITLPFGGELGELIV 258
Query 256 RILWLSERLSWLESQRHQFLRHLSHELKTPLASMREGTELL 296
++ERL E+Q + L +L T ++++ +G L+
Sbjct 259 NFNEMAERLERYEAQNIEELTAEKAKLDTLVSTIADGAMLV 299
Score = 20.8 bits (42), Expect = 1.7
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query 278 LSHELKTPLASMR-EGTELLADQVVGPLTPEQKEV-------VSILDSSSRNLQKLIEQL 329
++ +L PL + + LL GP EQ + +S+ R ++ ++ Q+
Sbjct 336 ITAQLTQPLRELAADQGSLLFSPGHGPQEEEQDKTYAPEEFRISLTQPFPRTIRLMLTQV 395
Query 330 LDYNRK 335
LD NR+
Sbjct 396 LDQNRE 401
>P23545 Alkaline phosphatase synthesis sensor protein PhoR [Bacillus
subtilis (strain 168)]
Length=579
Score = 100 bits (250), Expect = 8e-26
Identities = 68/229 (30%), Positives = 117/229 (51%), Gaps = 10/229 (4%)
Query 267 LESQRHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQ--KEVVSILDSSSRNLQK 324
LE R F+ ++SHELKTP+ S++ TE L D G + ++ E +SI+ S LQ
Sbjct 347 LEQMRKDFVANVSHELKTPITSIKGFTETLLD---GAMEDKEALSEFLSIILKESERLQS 403
Query 325 LIEQLLDYNR-KQADSAVELDNVELAPL---VETVVSAHSLPARAKMMHTDVDLKATACL 380
L++ LLD ++ +Q + + ++ E A + +ET++ H + +H +V
Sbjct 404 LVQDLLDLSKIEQQNFTLSIETFEPAKMLGEIETLLK-HKADEKGISLHLNVPKDPQYVS 462
Query 381 AEPMLLMSVLDNLYSNAVHYGAESGNICLRSSLHGARVYIDVINTGTPIPQEERAMIFEP 440
+P L V NL +NA+ Y E G++ + + I+V ++G I +EE IFE
Sbjct 463 GDPYRLKQVFLNLVNNALTYTPEGGSVAINVKPREKDIQIEVADSGIGIQKEEIPRIFER 522
Query 441 FFQGSHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIEL 489
F++ R G+GLGL+I + I +G++ + E G+ F + L
Sbjct 523 FYRVDKDRSRNSGGTGLGLAIVKHLIEAHEGKIDVTSELGRGTVFTVTL 571
>P08401 Sensor protein CreC [Escherichia coli (strain K12)]
Length=474
Score = 99.8 bits (247), Expect = 1e-25
Identities = 83/285 (29%), Positives = 133/285 (47%), Gaps = 10/285 (4%)
Query 198 WQSLVLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLGNSVSFSGPSELRSVGQRI 257
W S +L ++LV+ I + + R + + + + + + G SELR + Q +
Sbjct 186 WASAILLGIALVIGAGMVWWINRSIARLTRYADSVTDNKPV--PLPDLGSSELRKLAQAL 243
Query 258 LWLSERLSWLESQRHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVSILDS 317
+ +L ++ Q++ L+HELK+PLA++R E+L + GP + +
Sbjct 244 ESMRVKLEG-KNYIEQYVYALTHELKSPLAAIRGAAEILRE---GPPPEVVARFTDNILT 299
Query 318 SSRNLQKLIEQLLDYNRKQADSAVELDNVELAPLVETVVSAHSLPARAKMMHTDVDLKAT 377
+ +Q L+E LL R + V L V++A L V A ++ K + V
Sbjct 300 QNARMQALVETLLRQARLENRQEVVLTAVDVAALFRRVSEARTVQLAEKKITLHVTPTEV 359
Query 378 ACLAEPMLLMSVLDNLYSNAVHYGAESGNICLRSSLHGARVYIDVINTGTPIPQEERAMI 437
AEP LL L NL NA+ + ESG I L + + V + V++TG+ IP + I
Sbjct 360 NVAAEPALLEQALGNLLDNAIDFTPESGCITLSAEVDQEHVTLKVLDTGSGIPDYALSRI 419
Query 438 FEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQGELYL--VDESG 480
FE F+ S R K SGLGL+ + R GE+ L V E G
Sbjct 420 FERFY--SLPRANGQKSSGLGLAFVSEVARLFNGEVTLRNVQEGG 462
Score = 21.6 bits (44), Expect = 0.93
Identities = 9/30 (30%), Positives = 18/30 (60%), Gaps = 0/30 (0%)
Query 26 PVFPRSLRQLVMLAFLLILLPLLVLAWQAW 55
PV RS R+++ + +L+ + L++ A W
Sbjct 175 PVIKRSERRILWASAILLGIALVIGAGMVW 204
>Q1XD95 Uncharacterized sensor-like histidine kinase ycf26 [Neopyropia
yezoensis]
Length=653
Score = 98.2 bits (243), Expect = 7e-25
Identities = 64/244 (26%), Positives = 123/244 (50%), Gaps = 16/244 (7%)
Query 267 LESQRHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVSILDSSSRNLQKLI 326
L ++QF+ ++SHEL+TPL ++R E L + ++ E ++I + + L +L+
Sbjct 411 LNEVKNQFISNVSHELRTPLFNIRSFLETLYEYHDSLDNRQKLEFLAIANKETERLTRLV 470
Query 327 EQLLDYNRKQADSAVELDNVELAPLVETVVSAHSLPARAKM--MHTDVDLKATACLAEPM 384
+LD +R ++D L +++L +E V + L A+ K +H D++ L
Sbjct 471 NDVLDLSRLESDQEYPLQSMDLVSAIEQTVRTYQLSAKDKKIDLHIDIEENLPCILGNYS 530
Query 385 LLMSVLDNLYSNAVHYGAESGNICLRS-------------SLHGARVYIDVINTGTPIPQ 431
L++ +L NL N++ + G I LR+ L +V +++ +TG I +
Sbjct 531 LVLQILANLIGNSLKFTHSDGIIVLRTYRINDSASKLNSTPLQIQKVRVEICDTGIGISK 590
Query 432 EERAMIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELPS 491
+ + IF F + + ++G+GLGLSI ++ I++ E++L E CF +L
Sbjct 591 KNQERIFARFLRIENYVH-TLEGTGLGLSIVKNIIQKHNSEIHLYSELKNGSCFFFDLII 649
Query 492 SKNT 495
+K+T
Sbjct 650 AKDT 653
>P9WGK9 Sensor histidine kinase MtrB [Mycobacterium tuberculosis
(strain ATCC 25618 / H37Rv)]
Length=567
Score = 95.9 bits (237), Expect = 3e-24
Identities = 81/306 (26%), Positives = 141/306 (46%), Gaps = 13/306 (4%)
Query 201 LVLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLGNSVSFSGPSELRSVGQRILWL 260
LVL ++ + LL +R ++ PV++ R+ R EG L + G ++ + +
Sbjct 220 LVLLVLLAGIALLVSRQVVVPVRSASRIAERFAEGH-LSERMPVRGEDDMARLAVSFNDM 278
Query 261 SERLSWLESQ-------RHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVS 313
+E LS +Q + +F +SHEL+TPL ++R +L+ D L P +
Sbjct 279 AESLSRQIAQLEEFGNLQRRFTSDVSHELRTPLTTVRMAADLIYDHSAD-LDPTLRRSTE 337
Query 314 ILDSSSRNLQKLIEQLLDYNRKQADSA-VELDNVELAPLVETVVSAHSLPARAKMMHTDV 372
++ S + L+ LL+ +R A A + ++ V+L V + A + V
Sbjct 338 LMVSELDRFETLLNDLLEISRHDAGVAELSVEAVDLRTTVNNALGNVGHLAEEAGIELLV 397
Query 373 DLKATACLAE--PMLLMSVLDNLYSNAVHYGAESGNICLRSSLHGARVYIDVINTGTPIP 430
DL A +AE + +L NL +NA+ + AE + +R + V + V + G +
Sbjct 398 DLPAEQVIAEVDARRVERILRNLIANAIDH-AEHKPVRIRMAADEDTVAVTVRDYGVGLR 456
Query 431 QEERAMIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELP 490
E ++F F++ R G+GLGL+I+ + R QG L E G+ CFR+ LP
Sbjct 457 PGEEKLVFSRFWRSDPSRVRRSGGTGLGLAISVEDARLHQGRLEAWGEPGEGACFRLTLP 516
Query 491 SSKNTK 496
+ K
Sbjct 517 MVRGHK 522
>P9WGK8 Sensor histidine kinase MtrB [Mycobacterium tuberculosis
(strain CDC 1551 / Oshkosh)]
Length=567
Score = 95.5 bits (236), Expect = 5e-24
Identities = 81/306 (26%), Positives = 141/306 (46%), Gaps = 13/306 (4%)
Query 201 LVLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLGNSVSFSGPSELRSVGQRILWL 260
LVL ++ + LL +R ++ PV++ R+ R EG L + G ++ + +
Sbjct 220 LVLLVLLAGIALLVSRQVVVPVRSASRIAERFAEGH-LSERMPVRGEDDMARLAVSFNDM 278
Query 261 SERLSWLESQ-------RHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVS 313
+E LS +Q + +F +SHEL+TPL ++R +L+ D L P +
Sbjct 279 AESLSRQIAQLEEFGNLQRRFTSDVSHELRTPLTTVRMAADLIYDHSAD-LDPTLRRSTE 337
Query 314 ILDSSSRNLQKLIEQLLDYNRKQADSA-VELDNVELAPLVETVVSAHSLPARAKMMHTDV 372
++ S + L+ LL+ +R A A + ++ V+L V + A + V
Sbjct 338 LMVSELDRFETLLNDLLEISRHDAGVAELSVEAVDLRTTVNNALGNVGHLAEEAGIELLV 397
Query 373 DLKATACLAE--PMLLMSVLDNLYSNAVHYGAESGNICLRSSLHGARVYIDVINTGTPIP 430
DL A +AE + +L NL +NA+ + AE + +R + V + V + G +
Sbjct 398 DLPAEQVIAEVDARRVERILRNLIANAIDH-AEHKPVRIRMAADEDTVAVTVRDYGVGLR 456
Query 431 QEERAMIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELP 490
E ++F F++ R G+GLGL+I+ + R QG L E G+ CFR+ LP
Sbjct 457 PGEEKLVFSRFWRSDPSRVRRSGGTGLGLAISVEDARLHQGRLEAWGEPGEGACFRLTLP 516
Query 491 SSKNTK 496
+ K
Sbjct 517 LVRGHK 522
>P59963 Sensor histidine kinase MtrB [Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97)]
Length=567
Score = 95.5 bits (236), Expect = 5e-24
Identities = 81/306 (26%), Positives = 141/306 (46%), Gaps = 13/306 (4%)
Query 201 LVLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLGNSVSFSGPSELRSVGQRILWL 260
LVL ++ + LL +R ++ PV++ R+ R EG L + G ++ + +
Sbjct 220 LVLLVLLAGIALLVSRQVVVPVRSASRIAERFAEGH-LSERMPVRGEDDMARLAVSFNDM 278
Query 261 SERLSWLESQ-------RHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVS 313
+E LS +Q + +F +SHEL+TPL ++R +L+ D L P +
Sbjct 279 AESLSRQIAQLEEFGNLQRRFTSDVSHELRTPLTTVRMAADLIYDHSAD-LDPTLRRSTE 337
Query 314 ILDSSSRNLQKLIEQLLDYNRKQADSA-VELDNVELAPLVETVVSAHSLPARAKMMHTDV 372
++ S + L+ LL+ +R A A + ++ V+L V + A + V
Sbjct 338 LMVSELDRFETLLNDLLEISRHDAGVAELSVEAVDLRTTVNNALGNVGHLAEEAGIELLV 397
Query 373 DLKATACLAE--PMLLMSVLDNLYSNAVHYGAESGNICLRSSLHGARVYIDVINTGTPIP 430
DL A +AE + +L NL +NA+ + AE + +R + V + V + G +
Sbjct 398 DLPAEQVIAEVDARRVERILRNLIANAIDH-AEHKPVRIRMAADEDTVAVTVRDYGVGLR 456
Query 431 QEERAMIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELP 490
E ++F F++ R G+GLGL+I+ + R QG L E G+ CFR+ LP
Sbjct 457 PGEEKLVFSRFWRSDPSRVRRSGGTGLGLAISVEDARLHQGRLEAWGEPGEGACFRLTLP 516
Query 491 SSKNTK 496
+ K
Sbjct 517 LVRGHK 522
>O34206 Alginate biosynthesis sensor protein KinB [Pseudomonas
aeruginosa]
Length=595
Score = 95.5 bits (236), Expect = 5e-24
Identities = 66/227 (29%), Positives = 113/227 (50%), Gaps = 9/227 (4%)
Query 268 ESQRHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVSILDSSSRNLQKLIE 327
E R +F+ SHEL+TP+ M+ LL +++ P + +++ +D L LI
Sbjct 373 ERVRSEFVLRASHELRTPVTGMQMAFSLLRERLDFPAESREADLIQTVDEEMSRLVLLIN 432
Query 328 QLLDYNRKQAD-SAVELDNVELAPLVETVVSAHSLP---ARAKMMHTDVDLKATACLAEP 383
LL+++R Q +EL + +L L+ T +P AR + ++ + +
Sbjct 433 DLLNFSRYQTGMQKLELASCDLVDLL-TQAQQRFIPKGEARRVSLQLELGDELPRLQLDR 491
Query 384 MLLMSVLDNLYSNAVHYGAESGNICLRSSLHGARVYIDVINTGTPIPQEERAMIFEPFFQ 443
+ + V+DNL NA+ + +E G I L++ G RV I V + G IP ++ IFEPF Q
Sbjct 492 LQIERVIDNLLENALRHSSEGGQIHLQARRQGDRVLIAVEDNGEGIPFSQQGRIFEPFVQ 551
Query 444 GSHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELP 490
++ GA GLGL + ++ I+ G + + + GQ F + LP
Sbjct 552 VGRKKGGA----GLGLELCKEIIQLHGGRIAVRSQPGQGARFYMLLP 594
Score = 24.6 bits (52), Expect = 0.11
Identities = 19/103 (18%), Positives = 43/103 (42%), Gaps = 1/103 (1%)
Query 197 GWQSLVLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLGNSVSFSGPSELRSVGQR 256
G + + L+ V R P++ + R +R+GEG ++ + +E+ + +R
Sbjct 176 GLVGVAILLIGFVTAHSIARRFGAPIETLARAADRIGEG-DFDVTLPMTNVAEVGQLTRR 234
Query 257 ILWLSERLSWLESQRHQFLRHLSHELKTPLASMREGTELLADQ 299
++E L + + L+ L S+ +G + +Q
Sbjct 235 FGLMAEALRQYRKTSVEEVLSGERRLQAVLDSIDDGLVIFDNQ 277
>A0QR01 Sensor-like histidine kinase SenX3 [Mycolicibacterium
smegmatis (strain ATCC 700084 / mc(2)155)]
Length=384
Score = 92.4 bits (228), Expect = 2e-23
Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 4/226 (2%)
Query 267 LESQRHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVSILDSSSRNLQKLI 326
+E+ R F+ ++SHELKTP+ +M E L P T + + + S L +I
Sbjct 143 MEATRRDFVANVSHELKTPVGAMSVLAEALLASADDPDTV--RRFAEKMVAESHRLADMI 200
Query 327 EQLLDYNRKQ-ADSAVELDNVELAPLVETVVSAHSLPARAKMMHTDVDLKAT-ACLAEPM 384
+L++ +R Q A+ +LD V++ +V VS H + A + D L +
Sbjct 201 GELIELSRLQGAERLPDLDAVDVDSIVSEAVSRHKVAADNSQISITTDAPTGYRVLGDEG 260
Query 385 LLMSVLDNLYSNAVHYGAESGNICLRSSLHGARVYIDVINTGTPIPQEERAMIFEPFFQG 444
LL++ + NL SNA+ Y ++ + G + I V + G I ++++ +FE FF+
Sbjct 261 LLVTAIANLVSNAIAYSPNGTDVSISRRKRGGNIEIAVTDRGIGIAKDDQERVFERFFRV 320
Query 445 SHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELP 490
R A G+GLGL+I + G + L + G F + +P
Sbjct 321 DKARSRATGGTGLGLAIVKHVAANHNGSIRLWSQPGTGSTFTLSIP 366
>Q04943 Signal transduction histidine-protein kinase AfsQ2 [Streptomyces
coelicolor (strain ATCC BAA-471 / A3(2) / M145)]
Length=535
Score = 93.2 bits (230), Expect = 2e-23
Identities = 82/312 (26%), Positives = 143/312 (46%), Gaps = 27/312 (9%)
Query 197 GWQSLVLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLGNSVSFSGPSELRSVGQR 256
G + + L S ++ ++ PV + RLGEG+ L + SG EL + +
Sbjct 205 GIATALALLGSALLAQALATTVLKPVHRLGVAARRLGEGK-LDTRLRVSGTDELADLSRT 263
Query 257 ILWLSERL-------SWLESQRHQFLRHLSHELKTPLASMREGTELLADQVV-------- 301
+E L + E +F+ +SHEL+TPL ++ TE+L +++
Sbjct 264 FNSAAENLEKRVADMAGREQASRRFVADMSHELRTPLTALTAVTEVLEEELEYAGEGEGE 323
Query 302 -GPLTPEQKEVVSILDSSSRNLQKLIEQLLDYNRKQADSA-VELDNVELAPLVETVVSAH 359
G P + V ++ S +R L L+E L++ R A +A + LD+V++A + +
Sbjct 324 GGSFDPMVEPAVRLVVSETRRLNDLVENLMEVTRFDAGTARLVLDDVDVADQITACID-- 381
Query 360 SLPARAKMMHTDVDL-KATACLAEPMLLMSVLDNLYSNAVHYGAESGNICLRSSLHGARV 418
ARA + D+D + +P L +L NL NA+ +G + + + H +
Sbjct 382 ---ARAWLDAVDLDAERGVHARLDPRRLDVILANLIGNALKHGGSPVRVSVARADH--EI 436
Query 419 YIDVINTGTPIPQEERAMIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDE 478
I V + G IP++ +F+ F++ S R + +GSGLGLSIA + GE+ +
Sbjct 437 VIRVRDNGPGIPEDVLPHVFDRFYKASASRPRS-EGSGLGLSIALENAHIHGGEITAENA 495
Query 479 SGQDVCFRIELP 490
F + LP
Sbjct 496 PEGGAVFTLRLP 507
>P9WGK5 Sensor-like histidine kinase SenX3 [Mycobacterium tuberculosis
(strain ATCC 25618 / H37Rv)]
Length=410
Score = 92.0 bits (227), Expect = 3e-23
Identities = 66/236 (28%), Positives = 119/236 (50%), Gaps = 22/236 (9%)
Query 267 LESQRHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVV-----SILDSSSRN 321
+E+ R F+ ++SHELKTP+ +M LLA+ ++ + + E V +L ++R
Sbjct 154 MEAARRDFVANVSHELKTPVGAMA----LLAEALLA--SADDSETVRRFAEKVLIEANR- 206
Query 322 LQKLIEQLLDYNRKQ-ADSAVELDNVELAPLVETVVSAHSLPARAKMMHTDVDLKATA-- 378
L ++ +L++ +R Q A+ + +V++ +V +S H + A + D++++ A
Sbjct 207 LGDMVAELIELSRLQGAERLPNMTDVDVDTIVSEAISRHKVAAD----NADIEVRTDAPS 262
Query 379 ---CLAEPMLLMSVLDNLYSNAVHYGAESGNICLRSSLHGARVYIDVINTGTPIPQEERA 435
L + LL++ L NL SNA+ Y + + GA + I V + G I E++
Sbjct 263 NLRVLGDQTLLVTALANLVSNAIAYSPRGSLVSISRRRRGANIEIAVTDRGIGIAPEDQE 322
Query 436 MIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELPS 491
+FE FF+G R A GSGLGL+I + G + + + G F + LP+
Sbjct 323 RVFERFFRGDKARSRATGGSGLGLAIVKHVAANHDGTIRVWSKPGTGSTFTLALPA 378
>P0A601 Sensor-like histidine kinase SenX3 [Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97)]
Length=410
Score = 92.0 bits (227), Expect = 3e-23
Identities = 66/236 (28%), Positives = 119/236 (50%), Gaps = 22/236 (9%)
Query 267 LESQRHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVV-----SILDSSSRN 321
+E+ R F+ ++SHELKTP+ +M LLA+ ++ + + E V +L ++R
Sbjct 154 MEAARRDFVANVSHELKTPVGAMA----LLAEALLA--SADDSETVRRFAEKVLIEANR- 206
Query 322 LQKLIEQLLDYNRKQ-ADSAVELDNVELAPLVETVVSAHSLPARAKMMHTDVDLKATA-- 378
L ++ +L++ +R Q A+ + +V++ +V +S H + A + D++++ A
Sbjct 207 LGDMVAELIELSRLQGAERLPNMTDVDVDTIVSEAISRHKVAAD----NADIEVRTDAPS 262
Query 379 ---CLAEPMLLMSVLDNLYSNAVHYGAESGNICLRSSLHGARVYIDVINTGTPIPQEERA 435
L + LL++ L NL SNA+ Y + + GA + I V + G I E++
Sbjct 263 NLRVLGDQTLLVTALANLVSNAIAYSPRGSLVSISRRRRGANIEIAVTDRGIGIAPEDQE 322
Query 436 MIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELPS 491
+FE FF+G R A GSGLGL+I + G + + + G F + LP+
Sbjct 323 RVFERFFRGDKARSRATGGSGLGLAIVKHVAANHDGTIRVWSKPGTGSTFTLALPA 378
Lambda K H a alpha
0.321 0.134 0.383 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2935728
Database: aba0c615ee0a7ca1be481cb8248e35bc.SwissProt.fasta
Posted date: May 20, 2024 9:21 AM
Number of letters in database: 7,354
Number of sequences in database: 14
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
