BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 17d4ed64ae94aacd67a801950dff36db.SwissProt.fasta
           2 sequences; 615 total letters



Query= Z3816

Length=291
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P76584 Uncharacterized protein YphB [Escherichia coli (strain K12)]   618     0.0  
P39840 Aldose 1-epimerase [Bacillus subtilis (strain 168)]            49.3    5e-11


>P76584 Uncharacterized protein YphB [Escherichia coli (strain 
K12)]
Length=290

 Score = 618 bits (1594),  Expect = 0.0
 Identities = 287/290 (99%), Positives = 288/290 (99%), Gaps = 0/290 (0%)

Query  1    MTIYTLSHGSLKLGVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGN  60
            MTIYTLSHGSLKL VSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGN
Sbjct  1    MTIYTLSHGSLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGN  60

Query  61   RFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYEHRSGVYHYRVSQAF  120
            RFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYEHRSGVYHYRVSQAF
Sbjct  61   RFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYEHRSGVYHYRVSQAF  120

Query  121  HLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCE  180
            HLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCE
Sbjct  121  HLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCE  180

Query  181  QLPQELDFNQLAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIIETTPPAPCYFIFVSDPA  240
            QLPQELDFNQ APLPRQWVNNGFAGWNGQARIEQPQEGYAII+ETTPPAPCYFIFVSDPA
Sbjct  181  QLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIMETTPPAPCYFIFVSDPA  240

Query  241  FDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLRVEWL  290
            FDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLRVEWL
Sbjct  241  FDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLRVEWL  290


>P39840 Aldose 1-epimerase [Bacillus subtilis (strain 168)]
Length=325

 Score = 49.3 bits (116),  Expect = 5e-11
 Identities = 58/261 (22%), Positives = 109/261 (42%), Gaps = 27/261 (10%)

Query  49   PLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVS--HSDDSLCLVYE  106
            P++   NR+S   F ++GR Y    N +   ++LHG  +  +W  V+   +D+ + +  E
Sbjct  67   PILFPPNRISDGTFSFRGRTYHFDINEKDKHNHLHGFLYHEKWNVVTTKQTDEGVIVETE  126

Query  107  ---------HRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQT  157
                      +   +H  V   + +  +TL    +V N+G E  P+G G+H  F    ++
Sbjct  127  IDLSELPHVQKQFPHHAVVRMTYTIKENTLFKHATVMNKGKEAFPWGIGYHTTFIFPAES  186

Query  158  RI-QAQASGYWLEREQWLAGEFCEQLPQELDFNQLAPLPRQWVNNGF------AGWNGQA  210
             +    A   W   E+ L       +P +   ++   L  + +++ F       G   QA
Sbjct  187  SLFSLTADQQWELDERLLPTGKLMDVPYKEALHEGMDLRHKQLDDVFLSSYQKRGGENQA  246

Query  211  RIEQPQEGYAIIIETTPPAPCYFIFVSDPAFDKGYAFDFFCLEP---MSHAPDDHHRPEG  267
             I       +II +       + ++ +D    +GY     C EP   +++A +       
Sbjct  247  VIYHQHAHISIIYKADEQFKHWVVYNADG--KQGY----LCPEPYTWVTNAVNLDLPSSL  300

Query  268  GDLIALAPGESTTSEMSLRVE  288
              L  L PGE TT++ S+ +E
Sbjct  301  TGLQVLEPGEETTAKSSITIE  321


 Score = 14.2 bits (25),  Expect = 8.1
 Identities = 4/15 (27%), Positives = 8/15 (53%), Gaps = 0/15 (0%)

Query  275  PGESTTSEMSLRVEW  289
            P ES+   ++   +W
Sbjct  183  PAESSLFSLTADQQW  197



Lambda      K        H        a         alpha
   0.322    0.139    0.467    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 143780


  Database: 17d4ed64ae94aacd67a801950dff36db.SwissProt.fasta
    Posted date:  Jun 1, 2024  1:14 PM
  Number of letters in database: 615
  Number of sequences in database:  2



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40