BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 67bc1ae074b34bc660826a4f248cf30e.TrEMBL.fasta
17 sequences; 4,828 total letters
Query= Z3572
Length=261
Score E
Sequences producing significant alignments: (Bits) Value
C3T212 Lysine-, arginine-, ornithine-binding periplasmic protein ... 509 0.0
Q8XCS4 Lysine/arginine/ornithine transporter subunit [Escherichia... 509 0.0
A0A891SRY7 Lysine/arginine/ornithine ABC transporter substrate-bi... 509 0.0
A0A0H3PQP6 Lysine-arginine-ornithine-binding periplasmic protein ... 509 0.0
D7XLD2 Lysine-arginine-ornithine-binding periplasmic protein [Esc... 509 0.0
B7LBG4 ArgT protein [Escherichia coli (strain 55989 / EAEC)] 509 0.0
A0A478L6W4 Lysine/arginine/ornithine transporter subunit [Escheri... 508 0.0
O50181 ABC transporter substrate-binding protein [Pseudomonas aer... 233 2e-80
Q9RHJ2 ABC transporter substrate-binding protein [Vibrio alginoly... 195 2e-65
Q8ZKA9 Arginine-binding periplasmic protein [Salmonella typhimuri... 157 1e-50
A0A0E1GUW8 ABC transporter arginine-binding protein 1 [Klebsiella... 128 2e-39
Q9WZ62 Amino acid ABC transporter, periplasmic amino acid-binding... 124 9e-38
Q72JG5 Amino acid ABC transporter, binding protein [Thermus therm... 122 6e-37
H9L4J4 Glutamine ABC transporter periplasmic protein [Salmonella ... 120 1e-36
Q9CES5 Glutamine ABC transporter permease and substrate binding p... 120 3e-34
D2WXN0 Oligopeptide-binding protein 5 [Brachyspira pilosicoli] 111 8e-33
D2WXN1 Oligopeptide-binding protein 6 [Brachyspira pilosicoli] 110 2e-32
>C3T212 Lysine-, arginine-, ornithine-binding periplasmic protein
[Escherichia coli]
Length=260
Score = 509 bits (1312), Expect = 0.0
Identities = 260/260 (100%), Positives = 260/260 (100%), Gaps = 0/260 (0%)
Query 1 MKKSILALSLLVGISAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC 60
MKKSILALSLLVGISAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC
Sbjct 1 MKKSILALSLLVGISAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC 60
Query 61 KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK 120
KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK
Sbjct 61 KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK 120
Query 121 GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA 180
GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA
Sbjct 121 GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA 180
Query 181 LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR 240
LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR
Sbjct 181 LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR 240
Query 241 QDGTYDKMAKKYFDFNVYGD 260
QDGTYDKMAKKYFDFNVYGD
Sbjct 241 QDGTYDKMAKKYFDFNVYGD 260
>Q8XCS4 Lysine/arginine/ornithine transporter subunit [Escherichia
coli O157:H7]
Length=260
Score = 509 bits (1312), Expect = 0.0
Identities = 260/260 (100%), Positives = 260/260 (100%), Gaps = 0/260 (0%)
Query 1 MKKSILALSLLVGISAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC 60
MKKSILALSLLVGISAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC
Sbjct 1 MKKSILALSLLVGISAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC 60
Query 61 KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK 120
KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK
Sbjct 61 KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK 120
Query 121 GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA 180
GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA
Sbjct 121 GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA 180
Query 181 LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR 240
LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR
Sbjct 181 LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR 240
Query 241 QDGTYDKMAKKYFDFNVYGD 260
QDGTYDKMAKKYFDFNVYGD
Sbjct 241 QDGTYDKMAKKYFDFNVYGD 260
>A0A891SRY7 Lysine/arginine/ornithine ABC transporter substrate-binding
protein ArgT [Escherichia coli O157:H-]
Length=260
Score = 509 bits (1312), Expect = 0.0
Identities = 260/260 (100%), Positives = 260/260 (100%), Gaps = 0/260 (0%)
Query 1 MKKSILALSLLVGISAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC 60
MKKSILALSLLVGISAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC
Sbjct 1 MKKSILALSLLVGISAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC 60
Query 61 KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK 120
KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK
Sbjct 61 KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK 120
Query 121 GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA 180
GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA
Sbjct 121 GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA 180
Query 181 LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR 240
LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR
Sbjct 181 LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR 240
Query 241 QDGTYDKMAKKYFDFNVYGD 260
QDGTYDKMAKKYFDFNVYGD
Sbjct 241 QDGTYDKMAKKYFDFNVYGD 260
>A0A0H3PQP6 Lysine-arginine-ornithine-binding periplasmic protein
[Escherichia coli O157:H7 (strain EC869)]
Length=260
Score = 509 bits (1312), Expect = 0.0
Identities = 260/260 (100%), Positives = 260/260 (100%), Gaps = 0/260 (0%)
Query 1 MKKSILALSLLVGISAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC 60
MKKSILALSLLVGISAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC
Sbjct 1 MKKSILALSLLVGISAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC 60
Query 61 KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK 120
KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK
Sbjct 61 KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK 120
Query 121 GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA 180
GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA
Sbjct 121 GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA 180
Query 181 LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR 240
LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR
Sbjct 181 LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR 240
Query 241 QDGTYDKMAKKYFDFNVYGD 260
QDGTYDKMAKKYFDFNVYGD
Sbjct 241 QDGTYDKMAKKYFDFNVYGD 260
>D7XLD2 Lysine-arginine-ornithine-binding periplasmic protein
[Escherichia coli MS 84-1]
Length=260
Score = 509 bits (1310), Expect = 0.0
Identities = 259/260 (99%), Positives = 260/260 (100%), Gaps = 0/260 (0%)
Query 1 MKKSILALSLLVGISAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC 60
MKKSILALSLLVG+SAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC
Sbjct 1 MKKSILALSLLVGLSAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC 60
Query 61 KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK 120
KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK
Sbjct 61 KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK 120
Query 121 GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA 180
GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA
Sbjct 121 GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA 180
Query 181 LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR 240
LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR
Sbjct 181 LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR 240
Query 241 QDGTYDKMAKKYFDFNVYGD 260
QDGTYDKMAKKYFDFNVYGD
Sbjct 241 QDGTYDKMAKKYFDFNVYGD 260
>B7LBG4 ArgT protein [Escherichia coli (strain 55989 / EAEC)]
Length=260
Score = 509 bits (1310), Expect = 0.0
Identities = 259/260 (99%), Positives = 260/260 (100%), Gaps = 0/260 (0%)
Query 1 MKKSILALSLLVGISAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC 60
MKKSILALSLLVG+SAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC
Sbjct 1 MKKSILALSLLVGLSAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC 60
Query 61 KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK 120
KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK
Sbjct 61 KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK 120
Query 121 GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA 180
GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA
Sbjct 121 GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA 180
Query 181 LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR 240
LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR
Sbjct 181 LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR 240
Query 241 QDGTYDKMAKKYFDFNVYGD 260
QDGTYDKMAKKYFDFNVYGD
Sbjct 241 QDGTYDKMAKKYFDFNVYGD 260
>A0A478L6W4 Lysine/arginine/ornithine transporter subunit [Escherichia
coli]
Length=260
Score = 508 bits (1309), Expect = 0.0
Identities = 258/260 (99%), Positives = 260/260 (100%), Gaps = 0/260 (0%)
Query 1 MKKSILALSLLVGISAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC 60
MKKSILALSLLVG+SAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC
Sbjct 1 MKKSILALSLLVGLSAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC 60
Query 61 KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK 120
KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRL+AAK
Sbjct 61 KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLVAAK 120
Query 121 GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA 180
GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA
Sbjct 121 GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA 180
Query 181 LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR 240
LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR
Sbjct 181 LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR 240
Query 241 QDGTYDKMAKKYFDFNVYGD 260
QDGTYDKMAKKYFDFNVYGD
Sbjct 241 QDGTYDKMAKKYFDFNVYGD 260
>O50181 ABC transporter substrate-binding protein [Pseudomonas
aeruginosa]
Length=259
Score = 233 bits (595), Expect = 2e-80
Identities = 117/259 (45%), Positives = 163/259 (63%), Gaps = 2/259 (1%)
Query 1 MKKSILALSLLVGISAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC 60
MKK LAL + +S + A + VRIG + Y PFS K G GFD+D+GN +C
Sbjct 1 MKK--LALLGALALSVLSLPTFAADKPVRIGIEAAYPPFSLKTPDGQLAGFDVDIGNALC 58
Query 61 KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK 120
+ M+V+C WV +FD LIP+LK +KIDAI+SS++ITD+R++ + F++K Y +R + +
Sbjct 59 EEMKVQCKWVEQEFDGLIPALKVRKIDAILSSMTITDERKRSVDFTNKYYNTPARFVMKE 118
Query 121 GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA 180
G+ + LKGK GVL+GST + YA+ GV+VV Y +Q DL AGRLDA
Sbjct 119 GASLNDPKADLKGKKAGVLRGSTADRYASAELTPAGVEVVRYNSQQEANMDLVAGRLDAV 178
Query 181 LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR 240
+ D V +GFLK AGK +AF G + D KYFG+G G+ +RK D+EL FN A+ LR
Sbjct 179 VADSVNLEDGFLKTDAGKGYAFVGPQLTDAKYFGEGVGIAVRKGDSELAGKFNAAIDALR 238
Query 241 QDGTYDKMAKKYFDFNVYG 259
+G Y ++ KYF F+VYG
Sbjct 239 ANGKYKQIQDKYFSFDVYG 257
>Q9RHJ2 ABC transporter substrate-binding protein [Vibrio alginolyticus]
Length=256
Score = 195 bits (496), Expect = 2e-65
Identities = 105/262 (40%), Positives = 160/262 (61%), Gaps = 8/262 (3%)
Query 1 MKKSILALSLLVGISAAASSYAALPE--TVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNE 58
MKK +LA ++ + A S A E TVR G + Y PFS + G GFD+D+ N
Sbjct 1 MKKWLLAATIA---ATAVSGVAQAKEWKTVRFGIEGAYPPFSWTETDGSLKGFDVDMANA 57
Query 59 MCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIA 118
+C+ MQVKC VA D+D +IPSL A+K DAII+++SIT++R++++ F+ K ++ IA
Sbjct 58 LCEEMQVKCKIVAQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYALIPNKFIA 117
Query 119 AKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLD 178
KG+ + D+L GK + V + +T + Y + + K V++V Y + D Y DLA GR+
Sbjct 118 KKGANLD--FDNLDGKKIAVQRATTHDKYLTDNYGDK-VEIVRYGSFDEAYLDLANGRVA 174
Query 179 AALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGE 238
A L D A EG L + G + F G S+ D K+FG+G G+ +RK D +LT + A+
Sbjct 175 AVLGDASALEEGVLNKAGGDAYEFVGPSLTDPKWFGEGFGIAVRKQDKDLTKKLDAAIIS 234
Query 239 LRQDGTYDKMAKKYFDFNVYGD 260
LR+ G Y ++A KYF+++VYG+
Sbjct 235 LREKGVYQEIAGKYFNYDVYGE 256
>Q8ZKA9 Arginine-binding periplasmic protein [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=246
Score = 157 bits (397), Expect = 1e-50
Identities = 88/253 (35%), Positives = 137/253 (54%), Gaps = 9/253 (4%)
Query 1 MKKSILALSLLVGISAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC 60
MKK ++ + LL +S A+S +A T+ GT TYAP+ DA VGFDID+ N +C
Sbjct 1 MKKKLIVM-LLASLSVHAASVSA--RTLHFGTSATYAPYEFVDADNKIVGFDIDVANAVC 57
Query 61 KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK 120
K MQ +C++ FD+LIPSL+ KK DA+I+ + +T KR+Q+++FS Y S ++ +
Sbjct 58 KEMQAECSFTNQSFDSLIPSLRFKKFDAVIAGMDMTPKREQQVSFSQPYYEGLSAVVVTR 117
Query 121 GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA 180
T LKGK VG+ G+T + Y + + + + VAY + ++DL RL+
Sbjct 118 KGAYH-TFADLKGKKVGLENGTTHQRYLQD--KQQAITPVAYDSYLNAFTDLKNNRLEGV 174
Query 181 LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR 240
D A + P D+A D Y+G G G+ +RKD+ L N AL +++
Sbjct 175 FGDVAAIGKWLKNNP---DYAIMDERASDPDYYGKGLGIAVRKDNDALLQEINAALDKVK 231
Query 241 QDGTYDKMAKKYF 253
Y +M +K+F
Sbjct 232 ASPEYAQMQEKWF 244
>A0A0E1GUW8 ABC transporter arginine-binding protein 1 [Klebsiella
pneumoniae]
Length=243
Score = 128 bits (321), Expect = 2e-39
Identities = 77/251 (31%), Positives = 126/251 (50%), Gaps = 10/251 (4%)
Query 3 KSILALSLLVGISAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMCKR 62
+ +L + LL ++ +S ET+ GT T PF + + K VGFDIDL + +C++
Sbjct 2 RKVLTVLLLSTLAIGTAS----AETLHFGTTTANPPFVTANGKNQPVGFDIDLAHALCQQ 57
Query 63 MQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAKGS 122
MQ +C + A FD LIP+L+ KK DA+I+ + + R++++AFS A S ++
Sbjct 58 MQAQCQFTAQRFDTLIPALRFKKFDAVIAGMEVIPMREKQVAFSRPYRQALSGVVIV-NK 116
Query 123 PIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAALQ 182
+ T LK K VGV++G+ + Y + + K V V Y + + L AG++ +
Sbjct 117 DVAHTFADLKAKKVGVVKGTLHQRYLRD--KQKAVQAVPYDDVASALAALKAGQITGVMG 174
Query 183 DEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELRQD 242
D + P D+A D Y+G + +RKDD EL A N AL +
Sbjct 175 DFATLDAWQQENP---DYAIMDERATDPAYYGKQYAIAVRKDDPELLNAINDALAAVMAT 231
Query 243 GTYDKMAKKYF 253
+ +M +K+F
Sbjct 232 PDFQQMQQKWF 242
>Q9WZ62 Amino acid ABC transporter, periplasmic amino acid-binding
protein [Thermotoga maritima (strain ATCC 43589 / DSM 3109
/ JCM 10099 / NBRC 100826 / MSB8)]
Length=246
Score = 124 bits (310), Expect = 9e-38
Identities = 83/256 (32%), Positives = 129/256 (50%), Gaps = 15/256 (6%)
Query 1 MKKSILALSLLVGISAAASSYAALPET--VRIGTDTTYAPFSSKDAKGDFVGFDIDLGNE 58
MKK + LLV I + + + + +G + PF D G+ VGFD+DL E
Sbjct 1 MKKLLAVSILLVSIVIFSGAIDEIKSRGYLLVGLSADFPPFEFVDENGNIVGFDVDLAKE 60
Query 59 MCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIA 118
+ +R+ V+ V FD LIPSL KKID IIS ++IT++R++ +AFSD + A ++
Sbjct 61 IARRLGVELKIVDMTFDGLIPSLLTKKIDVIISGMTITEERKKVVAFSDPYFDAGQVIVV 120
Query 119 AKGSPIQP-TLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRL 177
K S +P T + L GK V V G+T + E + G+ VV + + +L GR
Sbjct 121 RKDSDFRPKTYEDLVGKTVAVQIGTTGDI---EVSKYDGIKVVRFDKFTDAFLELKRGRA 177
Query 178 DAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALG 237
DA + D A K P D + + ++Y G+ +RK+D +L N L
Sbjct 178 DAVVLDSATARAFVAKNP---DLVISSGVLSSEQY-----GIAVRKEDTDLLEFINSVLR 229
Query 238 ELRQDGTYDKMAKKYF 253
EL++ YD + +K+F
Sbjct 230 ELKK-SPYDVLIEKWF 244
>Q72JG5 Amino acid ABC transporter, binding protein [Thermus thermophilus
(strain ATCC BAA-163 / DSM 7039 / HB27)]
Length=254
Score = 122 bits (305), Expect = 6e-37
Identities = 79/256 (31%), Positives = 131/256 (51%), Gaps = 17/256 (7%)
Query 8 LSLLVGISAAASSYAALPET-----VRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMCKR 62
L L++ + AA + + E +RIGT+ + PF+ D + GF++DLGN + +R
Sbjct 7 LLLVLALGAALAQVRSFEEIKRSGEIRIGTEGAFPPFNYFDERNQLTGFEVDLGNAIAER 66
Query 63 MQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAKGS 122
+ +K W+A FD L+ L + D +I+S IT++R + + F++ Y +++ KG
Sbjct 67 LGLKPRWIAQSFDTLLIQLNQGRFDFVIASHGITEERARAVDFTNPHYCTGGVIVSRKGG 126
Query 123 PIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGV-DVVAYANQDLVYSDLAAGRLDAAL 181
P T L+GK VGV G+T Y + G+ +V Y DL AGR+D +
Sbjct 127 P--RTAKDLQGKVVGVQVGTT---YMEAAQKIPGIKEVRTYQRDPDALQDLLAGRIDTWI 181
Query 182 QDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELRQ 241
D A E +K+ ++ G V F + + + K + L A N+AL EL Q
Sbjct 182 TDRFVAKEA-IKERKLENTLQVGELV-----FQERVAMAVAKGNKSLLDALNRALAELMQ 235
Query 242 DGTYDKMAKKYFDFNV 257
DGTY ++++K+F +V
Sbjct 236 DGTYARISQKWFGEDV 251
>H9L4J4 Glutamine ABC transporter periplasmic protein [Salmonella
typhimurium]
Length=248
Score = 120 bits (302), Expect = 1e-36
Identities = 83/252 (33%), Positives = 130/252 (52%), Gaps = 11/252 (4%)
Query 3 KSILALSLLVGISAAASSYAALPETVRIGTDTTYAPFSSKDAKGD-FVGFDIDLGNEMCK 61
KS+L +SL A A S A + + + TDT + PF K +GD +VGFD+DL + + K
Sbjct 2 KSLLKVSLAALTLAFAVSSHAADKKLVVATDTAFVPFEFK--QGDKYVGFDVDLWDAIAK 59
Query 62 RMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAKG 121
+++ T DF +IP+L+ K ID ++ ++ITD+R++ I FSD Y + ++
Sbjct 60 ELKLDYTLKPMDFSGIIPALQTKNIDLALAGITITDERKKAIDFSDGYYKSGLLVMVKAN 119
Query 122 SPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAAL 181
+ ++ L GK V V G+ YA ++K D+ + N D Y +L R DA L
Sbjct 120 NNDIKSVKDLDGKVVAVKSGTGSVDYAKANIKTK--DLRQFPNIDNAYMELGTNRADAVL 177
Query 182 QDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELRQ 241
D F+K F G S++ ++Y GV K EL N AL LR+
Sbjct 178 HDTPNILY-FIKTAGNGQFKAVGESLEAQQY-----GVAFPKGSDELREKVNGALKTLRE 231
Query 242 DGTYDKMAKKYF 253
+GTY+++ KK+F
Sbjct 232 NGTYNEIYKKWF 243
>Q9CES5 Glutamine ABC transporter permease and substrate binding
protein protein [Lactococcus lactis subsp. lactis (strain
IL1403)]
Length=714
Score = 120 bits (301), Expect = 3e-34
Identities = 78/257 (30%), Positives = 136/257 (53%), Gaps = 15/257 (6%)
Query 1 MKKSILALSLLVGISAAASSYAALPE-----TVRIGTDTTYAPFSSKDAKGDFVGFDIDL 55
MKK AL++++ A +++ P TV+I +D++YAPF ++ + +VG D+D+
Sbjct 1 MKKLFFALAMML---ATVTAFLVAPSVKAETTVKIASDSSYAPFEFQNGQKKWVGIDVDI 57
Query 56 GNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSR 115
E+ K K FDA + +LKA ++D II+ ++ITD+R++ FS+ Y +
Sbjct 58 MQEVAKINDWKLEMSYPGFDAALQNLKAGQVDGIIAGMTITDERKETFDFSNPYYTSALT 117
Query 116 LIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAG 175
+ K S + D LKGK VG G+ + + E + G + Y++ +++ L++G
Sbjct 118 IATTKDSKLSDYSD-LKGKAVGAKNGTAAQTWLQENQKKYGYTIKTYSDGVHMFAALSSG 176
Query 176 RLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKA 235
+ A+ DEV +KQ G+D A S+ +G ++ ++ L FNKA
Sbjct 177 NIAGAM-DEVPVISYAMKQ--GQDLAMNFPSISLPGGYGFAV---MKGKNSTLVDGFNKA 230
Query 236 LGELRQDGTYDKMAKKY 252
L E++ +G YDK+ KKY
Sbjct 231 LAEMKSNGDYDKILKKY 247
Score = 100 bits (250), Expect = 2e-27
Identities = 65/226 (29%), Positives = 106/226 (47%), Gaps = 9/226 (4%)
Query 30 IGTDTTYAPFSSKDAKGDFVGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAI 89
I +D ++APF ++ F G D+DL N + K K W F A + S+++ D +
Sbjct 264 IASDNSFAPFEFQNDDKQFTGIDVDLLNAIAKNQGFKLKWNFIGFQAAVDSVQSGHADGM 323
Query 90 ISSLSITDKRQQEIAFSDKLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYAN 149
+S +SITD R+Q + Y+++ + + + LKGK +G G+ Y N
Sbjct 324 MSGMSITDARKQVFDYGSPYYSSNLTIATSSTDDSIKSWKDLKGKTLGAKNGTASFDYLN 383
Query 150 ETWRSKGVDVVAYANQDLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKD 209
+ G V + + +YS L G ++A + DE +KQ G+ FA + D
Sbjct 384 AHAKEYGYTVKTFTDATTMYSSLNNGSINALMDDEPVIKYA-IKQ--GQKFATPIKPIPD 440
Query 210 KKYFGDGTGVGLRK-DDAELTAAFNKALGELRQDGTYDKMAKKYFD 254
+Y G ++K + EL FN L LR +G YDK+ KY +
Sbjct 441 GQY-----GFAVKKGSNPELIEMFNNGLANLRANGEYDKIIDKYLE 481
>D2WXN0 Oligopeptide-binding protein 5 [Brachyspira pilosicoli]
Length=271
Score = 111 bits (278), Expect = 8e-33
Identities = 83/251 (33%), Positives = 131/251 (52%), Gaps = 15/251 (6%)
Query 14 ISAAASSYAALPETVRI--GTDTTYAPFSSKDAKGDFVGFDIDLGNEMCKRMQVKCTWVA 71
+S+A +S + E ++ G D T AP +D G+ VGFDIDL E+ R+ V+
Sbjct 27 VSSADNSLQKVKENGKLVLGLDDTLAPMGFRDDNGEIVGFDIDLAREVANRLGVELEAKP 86
Query 72 SDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDK-LYAADSRLIAAKGSPIQP--TL 128
D+ + I SLK +D I + ++ + R+Q++ F+ LY +RL+ AK S +
Sbjct 87 IDWSSAILSLKKGDVDVIWNGFAVNESRKQQVNFTKPYLY---NRLMIAKYSDRDDINSK 143
Query 129 DSLKGKHVGVLQGSTQ-EAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAALQDEVAA 187
+ LKGK VGV GS+ E N+ + ++ Y + + DL A R+DA + DE+ A
Sbjct 144 EELKGKIVGVQSGSSNYETLVNDPVSKEIKEIRQYDSYVNAFLDLEAKRIDAVIVDEIVA 203
Query 188 SEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELRQDGTYDK 247
K+ A DF ++DK VGLRK D EL A +KAL ++R DG +
Sbjct 204 RYYISKENA--DFTL----LEDKPITSQYLSVGLRKTDTELLNAIDKALDDMRADGKAAE 257
Query 248 MAKKYFDFNVY 258
++ K+F +V+
Sbjct 258 ISTKWFGKDVF 268
Score = 16.9 bits (32), Expect = 7.7
Identities = 5/14 (36%), Positives = 10/14 (71%), Gaps = 0/14 (0%)
Query 11 LVGISAAASSYAAL 24
+VG+ + +S+Y L
Sbjct 150 IVGVQSGSSNYETL 163
>D2WXN1 Oligopeptide-binding protein 6 [Brachyspira pilosicoli]
Length=271
Score = 110 bits (276), Expect = 2e-32
Identities = 84/254 (33%), Positives = 135/254 (53%), Gaps = 23/254 (9%)
Query 15 SAAASSYAALPETVRI--GTDTTYAPFSSKDAKGDFVGFDIDLGNEMCKRMQVKCTWVAS 72
SAA +S + E+ ++ G D T+AP +D +G+ VGFDIDL E+ R+ V+
Sbjct 28 SAADNSLQKVKESGKLVLGLDDTFAPMGFRDEEGNIVGFDIDLAKEVANRLGVELVAKPV 87
Query 73 DFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAKGSPIQ--PTLDS 130
D+ +++ SLK +D + + +I + R++++ F+ K Y ++RL+ K + T D
Sbjct 88 DWSSVVLSLKKGDVDVVWNGFAINETRKEQVNFT-KPY-LNNRLMIVKNADRDDIKTKDD 145
Query 131 LKGKHVGVLQGSTQ------EAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAALQDE 184
LKGK +GV GS+ + + ET + D+ YAN + DL A R+DA + DE
Sbjct 146 LKGKILGVQTGSSNYESLEADPISKETKEIRQYDI--YAN---AFLDLEAKRIDAVIVDE 200
Query 185 VAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELRQDGT 244
+ A K+ A DF K F GVG+RK D EL A +KAL ++R DG
Sbjct 201 IVARYYISKENA--DFELLEEYPITAKSF----GVGVRKTDTELLNAIDKALDDMRDDGK 254
Query 245 YDKMAKKYFDFNVY 258
+++ K+F +V+
Sbjct 255 AAEISTKWFGKDVF 268
Lambda K H a alpha
0.318 0.133 0.377 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 885360
Database: 67bc1ae074b34bc660826a4f248cf30e.TrEMBL.fasta
Posted date: May 20, 2024 11:02 AM
Number of letters in database: 4,828
Number of sequences in database: 17
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
