BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: a8007273fa94811aa44f7ad1edf02953.SwissProt.fasta
13 sequences; 11,030 total letters
Query= Z3277
Length=827
Score E
Sequences producing significant alignments: (Bits) Value
P33341 Outer membrane usher protein YehB [Escherichia coli (strai... 1596 0.0
P21647 Outer membrane usher protein MrkC [Klebsiella pneumoniae] 436 7e-144
P33129 Outer membrane usher protein HtrE [Escherichia coli (strai... 413 2e-134
P30130 Outer membrane usher protein FimD [Escherichia coli (strai... 380 6e-122
P33397 Outer membrane usher protein HifC [Haemophilus influenzae] 370 2e-118
P45997 Outer membrane usher protein HifC [Haemophilus influenzae] 369 3e-118
P46009 Outer membrane usher protein FocD [Escherichia coli] 367 7e-117
P75857 Probable outer membrane usher protein ElfC [Escherichia co... 365 2e-116
P45998 Outer membrane usher protein HifC [Haemophilus influenzae] 364 3e-116
Q8XDD1 Probable outer membrane usher protein ElfC [Escherichia co... 362 3e-115
P43662 Outer membrane usher protein LpfC [Salmonella typhimurium ... 341 2e-107
P53517 Outer membrane usher protein AfaC [Escherichia coli] 327 3e-102
P33388 Outer membrane usher protein SefC [Salmonella enteritidis] 308 2e-95
>P33341 Outer membrane usher protein YehB [Escherichia coli (strain
K12)]
Length=826
Score = 1596 bits (4132), Expect = 0.0
Identities = 764/826 (92%), Positives = 805/826 (97%), Gaps = 0/826 (0%)
Query 1 MLRMTPLASAIVALLLGIEAHAAEETFDTHFMMGGMKGEQVTNLRLDDNQPLPGQYDIDI 60
MLRMTPLASAIVALLLGIEA+AAEETFDTHFM+GGMK +QV N+RLDDNQPLPGQYDIDI
Sbjct 1 MLRMTPLASAIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANIRLDDNQPLPGQYDIDI 60
Query 61 YVNKQWRGKYEIIVKDNPHETCLTREIVKRLGINSDNFARENQCLTFEQLVQGGSYSWDI 120
YVNKQWRGKYEIIVKDNP ETCL+RE++KRLGINSDNFA QCLTFEQLVQGGSY+WDI
Sbjct 61 YVNKQWRGKYEIIVKDNPQETCLSREVIKRLGINSDNFASGKQCLTFEQLVQGGSYTWDI 120
Query 121 GIFRLDLAVPQAWVEELENGYVPPENWERGINAFYTSYYVSQYYSDYKASGNSKSTYVRF 180
G+FRLD +VPQAWVEELE+GYVPPENWERGINAFYTSYY+SQYYSDYKASGN+KSTYVRF
Sbjct 121 GVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYLSQYYSDYKASGNNKSTYVRF 180
Query 181 NSGLNLLGWQLHSDASFSKTDNNPGEWKSNTLYLEHGFSQILGTLRIGDMYTSADIFDSV 240
NSGLNLLGWQLHSDASFSKT+NNPG WKSNTLYLE GF+Q+LGTLR+GDMYTS+DIFDSV
Sbjct 181 NSGLNLLGWQLHSDASFSKTNNNPGVWKSNTLYLERGFAQLLGTLRVGDMYTSSDIFDSV 240
Query 241 RFTGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFSISDLQ 300
RF GVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPF+I+DLQ
Sbjct 241 RFRGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQ 300
Query 301 LAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASKQSDFVQ 360
LAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKYD AAGRSHIEGASKQSDFVQ
Sbjct 301 LAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKYDLAAGRSHIEGASKQSDFVQ 360
Query 361 AGYQYGFNNLLTLYGGTMVANNYYAFTLGTGWNTRIGAISVDATKSHSKQDNGDVFDGQS 420
AGYQYGFNNLLTLYGG+MVANNYYAFTLG GWNTRIGAISVDATKSHSKQDNGDVFDGQS
Sbjct 361 AGYQYGFNNLLTLYGGSMVANNYYAFTLGAGWNTRIGAISVDATKSHSKQDNGDVFDGQS 420
Query 421 YQIAYNKFLSQTSTRFGLAAWRYSSRDYRTFNDYVWANNKDNYRRDKNDVYDIADYYQND 480
YQIAYNKF+SQTSTRFGLAAWRYSSRDYRTFND+VWANNKDNYRRD+NDVYDIADYYQND
Sbjct 421 YQIAYNKFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDVYDIADYYQND 480
Query 481 FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRISYTLAASQ 540
FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNN RRISYTLAASQ
Sbjct 481 FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNLRRISYTLAASQ 540
Query 541 AYDENHAEEKRFNIFISIPFDWGDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGNR 600
AYDENH EEKRFNIFISIPFDWGDDV+TPRRQIYMSNSTTFDDQGFASNNTGLSGTVG+R
Sbjct 541 AYDENHHEEKRFNIFISIPFDWGDDVSTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGSR 600
Query 601 DQFNYGINLSHQHQGNETTAGANLTWTAPAATVNGSYSQSSTYRQVGASVSGGLVAWSGG 660
DQFNYG+NLSHQHQGNETTAGANLTW AP ATVNGSYSQSSTYRQ GASVSGG+VAWSGG
Sbjct 601 DQFNYGVNLSHQHQGNETTAGANLTWNAPVATVNGSYSQSSTYRQAGASVSGGIVAWSGG 660
Query 661 VNLANRLSETFAVMHAPGIKDAYVNGQKYRTTNCNGVVVYDGLTPYRENHLMMDVSQSDS 720
VNLANRLSETFAVM+APGIKDAYVNGQKYRTTN NGVV+YDG+TPYRENHLM+DVSQSDS
Sbjct 661 VNLANRLSETFAVMNAPGIKDAYVNGQKYRTTNRNGVVIYDGMTPYRENHLMLDVSQSDS 720
Query 721 ETELRGNRKMTAPYRGAVVLVDFDTDQRKPWFIKALRSDGQPLTFGYEVNDMHGHNIGVV 780
E ELRGNRK+ APYRGAVVLV+FDTDQRKPWFIKALR+DGQ LTFGYEVND+HGHNIGVV
Sbjct 721 EAELRGNRKIAAPYRGAVVLVNFDTDQRKPWFIKALRADGQSLTFGYEVNDIHGHNIGVV 780
Query 781 GQGSQIFIRTNEIPPAVNVAIDKQQGLSCTITFGKEIDESKNYICR 826
GQGSQ+FIRTNE+PP+VNVAIDKQQGLSCTITFGKEIDES+NYIC+
Sbjct 781 GQGSQLFIRTNEVPPSVNVAIDKQQGLSCTITFGKEIDESRNYICQ 826
>P21647 Outer membrane usher protein MrkC [Klebsiella pneumoniae]
Length=828
Score = 436 bits (1122), Expect = 7e-144
Identities = 262/829 (32%), Positives = 429/829 (52%), Gaps = 47/829 (6%)
Query 17 GIEAHAAEETFDTHFMMGGMKGEQVTNLRLDDNQPLPGQYDIDIYVNKQWRGKYEIIV-- 74
G E+ F+ F++G E+V R + G Y +D+Y N +W+G+Y++ +
Sbjct 28 GQESPGTIYQFNDGFIVGSR--EKVDPSRFSTSAISEGVYSLDVYTNGEWKGRYDLKITA 85
Query 75 -KDNPHETCLTREIVKRLGINSDNFARENQCLTFEQLVQGGSYSW-------DIGI---F 123
KD C T+ ++ + GI+ + N L+ ++ G W D I
Sbjct 86 GKDGKMGVCYTKAMLMQYGISPEKL---NPQLSEKEGFCGRLQEWRHEDNVKDTLIQSSL 142
Query 124 RLDLAVPQAWVEELENGYVPPENWERGINAFYTSYYVSQYYSDYKASGNS--KSTYVRFN 181
RLD+AVPQ + ++ +V P+ W++G+ A + + + S ++ S S Y+ N
Sbjct 143 RLDIAVPQIYEDQRLKNFVSPQFWDKGVAALNLGWMANAWNSHISSANGSDNSSAYLGVN 202
Query 182 SGLNLLGWQLHSDASFS-KTDNNPGEWKSNTLYLEHGFSQILGTLRIGDMYTSADIFDSV 240
+GL+ GW L + + + W SN YL+ QI + G ++T+ + FD++
Sbjct 203 AGLSWDGWLLKHIGNLNWQQQQGKAHWNSNQTYLQRPIPQINSIVSGGQIFTNGEFFDTI 262
Query 241 RFTGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFSISDLQ 300
GV L D M P+ +++ P ++ +AQSNAL T+ Q ++YQ VPPGPF++ D+
Sbjct 263 GLRGVNLATDDNMFPDGMRSYAPEIRDVAQSNALATVRQGSNIIYQTTVPPGPFTLQDVY 322
Query 301 LAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASKQSDFVQ 360
+G G+DL+VSVKE DGSV + VPYA+V +L+PG+++Y +AG+ + Q
Sbjct 323 PSGYGSDLEVSVKEGDGSVEVFSVPYASVAQLLRPGMTRYALSAGKVDDSSLRNKPMLYQ 382
Query 361 AGYQYGFNNLLTLYGGTMVANNYYAFTLGTGWNTRIGAISVDATKSHSKQDNGDVFDGQS 420
+Q+G NNL T Y G ++Y AF LGTG NT IGA+S D T + K D D GQS
Sbjct 383 GTWQHGLNNLFTGYTGVTGFDDYQAFLLGTGMNTGIGALSFDVTHTRLKSDTLDE-HGQS 441
Query 421 YQIAYNKFLSQTSTRFGLAAWRYSSRDYRTFNDYVWANNKDNYRRDKNDVYDIADYYQND 480
Y+ +N+ ++T T LAA+RYS++ Y ND ++A +++ ++ N Y +
Sbjct 442 YRATFNRMFTETQTSIVLAAYRYSTKGYYNLNDALYAVDQE---KNYNSNYTV------- 491
Query 481 FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRISYTLAASQ 540
+ +KN + ++Q+LP+GWG L DYW RSG+ K YQ SY+N + R+S+++ A +
Sbjct 492 WRQKNGMTFTVNQNLPDGWGGFYLCGRVADYWNRSGTEKQYQFSYNNMYGRLSWSVDAQR 551
Query 541 AY---DENHAEEKRFNIFISIPFDWGDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTV 597
Y H + R ++ S P +G++ R ++++T F++ FAS+ G++G++
Sbjct 552 VYTPDSSGHRRDDRVSLNFSYPLWFGEN-----RTANLTSNTAFNNSRFASSQIGVNGSL 606
Query 598 GNRDQFNYGINLSHQHQGNETTAGANLTWTAPAATVNGSYSQSSTYRQVGASVSGGLVAW 657
+ + NYG++ + G + N ++ P T+NGSYSQ YRQ G SG L+A
Sbjct 607 DSENNLNYGVSTT-TATGRQHDVALNGSYRTPWTTLNGSYSQGEGYRQSGVGASGTLIAH 665
Query 658 SGGVNLANRLSETFAVMHAPGIKDAYVNGQKYRTTNCNGVVVYDGLTPYRENHLMMDVSQ 717
GV + T A++ A + G + NG + L PYR N + +D
Sbjct 666 QHGVVFSPETGPTMALIEAKDAAGVMLPGSPGTRIDSNGYAILPYLRPYRINSVEIDPKG 725
Query 718 SDSETELRGNRKMTAPYRGAVVLVDFDTDQRKPWFIKALRSDGQPLTFGYEVNDMHGHNI 777
S+ + P+ G+VV V FDT + ++A +++G PL F + G I
Sbjct 726 SNDDVAFGSTVAQVVPWEGSVVKVSFDTTLQNNITLRARQANGLPLPFAATIFGPSGKEI 785
Query 778 GVVGQGSQIFIRTNEIPPAVNVAIDKQQGLSCTITFGKEIDESKNYICR 826
GVVGQGS +FI P A K G C++ +E ++K +CR
Sbjct 786 GVVGQGSMMFISDASAPKAT----VKWSGGQCSVELSQE--KTKETLCR 828
>P33129 Outer membrane usher protein HtrE [Escherichia coli (strain
K12)]
Length=865
Score = 413 bits (1061), Expect = 2e-134
Identities = 259/839 (31%), Positives = 430/839 (51%), Gaps = 38/839 (5%)
Query 13 ALLLGIEAHAAEETFDTHFMMGGMKGEQVTNLRLDDNQP-LPGQYDIDIYVNKQWRGKYE 71
ALL A +AE H + G + R + P +PG YD+ +YVN Q
Sbjct 20 ALLYCNTAFSAELVEYDHTFLMGQNASNIDLSRYSEGNPAIPGVYDVSVYVNDQPIINQS 79
Query 72 I----IVKDNPHETCLTREIVKRLGINSDNFAREN-----------QCLTFEQLVQGGSY 116
I I + C+T + + + INS + E CL +++ S
Sbjct 80 ITFVAIEGKKNAQACITLKNLLQFHINSPDINNEKAVLLARDETLGNCLNLTEIIPQASV 139
Query 117 SWDIGIFRLDLAVPQAWVEELENGYVPPENWERGINAFYTSYYVSQYYSDYKASGNSKST 176
+D+ RLD+ VPQAWV + YV P WE GINA SY ++ Y+S+ N +S
Sbjct 140 RYDVNDQRLDIDVPQAWVMKNYQNYVDPSLWENGINAAMLSYNLNGYHSETPGRKN-ESI 198
Query 177 YVRFNSGLNLLGWQLHSDASFSKTDNNPGEWKSNTLYLEHGFSQILGTLRIGDMYTSADI 236
Y FN G+NL W+L + +++ ++ + Y++ + + L +G+ YT+ +
Sbjct 199 YAAFNGGMNLGAWRLRASGNYNWMTDSGSNYDFKNRYVQRDIASLRSQLILGESYTTGET 258
Query 237 FDSVRFTGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFSI 296
FDSV G+RL+ D +MLP + +F P + G+A +NA VTI Q G+ +Y+ VPPG F I
Sbjct 259 FDSVSIRGIRLYSDSRMLPPTLASFAPIIHGVANTNAKVTITQGGYKIYETTVPPGAFVI 318
Query 297 SDLQLAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASKQS 356
DL +G G+DL V+++E+DGS T+ P+++V ML+PGV ++D + G+ + +
Sbjct 319 DDLSPSGYGSDLIVTIEESDGSKRTFSQPFSSVVQMLRPGVGRWDISGGQVLKDDIQDEP 378
Query 357 DFVQAGYQYGFNNLLTLYGGTMVA-NNYYAFTLGTGWNTRIGAISVDATKSHSKQDNGDV 415
+ QA Y YG NN LT Y G + NNY A LG G NT +GA S D T S+ + +
Sbjct 379 NLFQASYYYGLNNYLTGYTGIQITDNNYTAGLLGLGLNTSVGAFSFDVTHSNVRIPDDKT 438
Query 416 FDGQSYQIAYNKFLSQTSTRFGLAAWRYSSRDYRTFNDYVWANNKDNYRRDKNDVYDIAD 475
+ GQSY++++NK +TST +AA+RYS+++Y ND + ++ + + + +
Sbjct 439 YQGQSYRVSWNKLFEETSTSLNIAAYRYSTQNYLGLNDALTLIDEVKHPEQDLEPKSMRN 498
Query 476 YYQNDFGRKNSFSANMSQSL---PEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRI 532
Y + KN + +++Q L + +GS LS W DYW + +Y + YSN+
Sbjct 499 YSR----MKNQVTVSINQPLKFEKKDYGSFYLSGSWSDYWASGQNRSNYSIGYSNSTSWG 554
Query 533 SYTLAASQAYDENHAEEKRFNIFISIPFDWGDDVTTPRRQIYMSNSTTFDDQGFASNNTG 592
SY+++A ++++E+ + + +IP + + T +R + T F NN
Sbjct 555 SYSVSAQRSWNEDGDTDDSVYLSFTIPIE--KLLGTEQRTSGFQSIDTQISSDFKGNNQL 612
Query 593 LSGTVGNRD--QFNYGINLSH---QHQGNETTAGANLTWTAPAATVNGSYS-QSSTYRQV 646
+ G D + +Y +N + + + + G ++ +P T+ GS S S RQV
Sbjct 613 NVSSSGYSDNARVSYSVNTGYTMNKASKDLSYVGGYASYESPWGTLAGSISANSDNSRQV 672
Query 647 GASVSGGLVAWSGGVNLANRL---SETFAVMHAPGIKDAYVNGQKYRTTNCNGVVVYDGL 703
S GG V SGG+ +N S+T AV+ APG + A +N T + G V L
Sbjct 673 SLSTDGGFVLHSGGLTFSNDSFSDSDTLAVVQAPGAQGARIN-YGNSTIDRWGYGVTSAL 731
Query 704 TPYRENHLMMDVSQSDSETELRGNRKMTAPYRGAVVLVDFDTDQRKPWFIKALRSDGQPL 763
+PY EN + +D++ +++ EL+ + P +G+VV DF+T Q + + RSDG+ +
Sbjct 732 SPYHENRIALDINDLENDVELKSTSAVAVPRQGSVVFADFETVQGQSAIMNITRSDGKNI 791
Query 764 TFGYEVNDMHGHNIGVVGQGSQIFIRTNEIPPAVNVA-IDKQQGLSCTITFGKEIDESK 821
F ++ D G+ IG VGQG Q F+R E +++ +++ + +SC + + + K
Sbjct 792 PFAADIYDEQGNVIGNVGQGGQAFVRGIEQQGNISIKWLEQSKPVSCLAHYQQSPEAEK 850
>P30130 Outer membrane usher protein FimD [Escherichia coli (strain
K12)]
Length=878
Score = 380 bits (976), Expect = 6e-122
Identities = 241/796 (30%), Positives = 389/796 (49%), Gaps = 29/796 (4%)
Query 45 RLDDNQPLP-GQYDIDIYVNKQWRGKYEIIVKDNPHET----CLTREIVKRLGINSD--- 96
R ++ Q LP G Y +DIY+N + ++ E CLTR + +G+N+
Sbjct 66 RFENGQELPPGTYRVDIYLNNGYMATRDVTFNTGDSEQGIVPCLTRAQLASMGLNTASVA 125
Query 97 --NFARENQCLTFEQLVQGGSYSWDIGIFRLDLAVPQAWVEELENGYVPPENWERGINAF 154
N ++ C+ +VQ + D+G RL+L +PQA++ GY+PPE W+ GINA
Sbjct 126 GMNLLADDACVPLTTMVQDATAHLDVGQQRLNLTIPQAFMSNRARGYIPPELWDPGINAG 185
Query 155 YTSYYVSQYYSDYKASGNSKSTYVRFNSGLNLLGWQLHSDA--SFSKTDNNPG---EWKS 209
+Y S + GNS Y+ SGLN+ W+L + S++ +D + G +W+
Sbjct 186 LLNYNFSGNSVQNRIGGNSHYAYLNLQSGLNIGAWRLRDNTTWSYNSSDRSSGSKNKWQH 245
Query 210 NTLYLEHGFSQILGTLRIGDMYTSADIFDSVRFTGVRLFRDMQMLPNSKQNFTPRVQGIA 269
+LE + L +GD YT DIFD + F G +L D MLP+S++ F P + GIA
Sbjct 246 INTWLERDIIPLRSRLTLGDGYTQGDIFDGINFRGAQLASDDNMLPDSQRGFAPVIHGIA 305
Query 270 QSNALVTIEQNGFVVYQKEVPPGPFSISDLQLAGGGADLDVSVKEADGSVTTYLVPYAAV 329
+ A VTI+QNG+ +Y VPPGPF+I+D+ AG DL V++KEADGS + VPY++V
Sbjct 306 RGTAQVTIKQNGYDIYNSTVPPGPFTINDIYAAGNSGDLQVTIKEADGSTQIFTVPYSSV 365
Query 330 PNMLQPGVSKYDFAAGRSHIEGASKQ-SDFVQAGYQYGFNNLLTLYGGTMVANNYYAFTL 388
P + + G ++Y AG A ++ + F Q+ +G T+YGGT +A+ Y AF
Sbjct 366 PLLQREGHTRYSITAGEYRSGNAQQEKTRFFQSTLLHGLPAGWTIYGGTQLADRYRAFNF 425
Query 389 GTGWNT-RIGAISVDATKSHSKQDNGDVFDGQSYQIAYNKFLSQTSTRFGLAAWRYSSRD 447
G G N +GA+SVD T+++S + DGQS + YNK L+++ T L +RYS+
Sbjct 426 GIGKNMGALGALSVDMTQANSTLPDDSQHDGQSVRFLYNKSLNESGTNIQLVGYRYSTSG 485
Query 448 YRTFNDYVWANNKDNYRRDKNDVYDI----ADYYQNDFGRKNSFSANMSQSLPEGWGSVS 503
Y F D ++ ++ V + DYY + ++ ++Q L ++
Sbjct 486 YFNFADTTYSRMNGYNIETQDGVIQVKPKFTDYYNLAYNKRGKLQLTVTQQLGR-TSTLY 544
Query 504 LSTLWRDYWGRSGSSKDYQLSYSNNWRRISYTLAASQAYDE-NHAEEKRFNIFISIPFD- 561
LS + YWG S + +Q + + I++TL+ S + ++ + ++IPF
Sbjct 545 LSGSHQTYWGTSNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPFSH 604
Query 562 W-GDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGNRDQFNYGINLSHQHQG---NE 617
W D + R S S + D G +N G+ GT+ + +Y + + G +
Sbjct 605 WLRSDSKSQWRHASASYSMSHDLNGRMTNLAGVYGTLLEDNNLSYSVQTGYAGGGDGNSG 664
Query 618 TTAGANLTWTAPAATVNGSYSQSSTYRQVGASVSGGLVAWSGGVNLANRLSETFAVMHAP 677
+T A L + N YS S +Q+ VSGG++A + GV L L++T ++ AP
Sbjct 665 STGYATLNYRGGYGNANIGYSHSDDIKQLYYGVSGGVLAHANGVTLGQPLNDTVVLVKAP 724
Query 678 GIKDAYVNGQKYRTTNCNGVVVYDGLTPYRENHLMMDVSQSDSETELRGNRKMTAPYRGA 737
G KDA V Q T+ G V T YREN + +D + +L P RGA
Sbjct 725 GAKDAKVENQTGVRTDWRGYAVLPYATEYRENRVALDTNTLADNVDLDNAVANVVPTRGA 784
Query 738 VVLVDFDTDQRKPWFIKALRSDGQPLTFGYEVNDMHGHNIGVVGQGSQIFIRTNEIPPAV 797
+V +F + + L + +PL FG V + G+V Q+++ + V
Sbjct 785 IVRAEFKA-RVGIKLLMTLTHNNKPLPFGAMVTSESSQSSGIVADNGQVYLSGMPLAGKV 843
Query 798 NVAIDKQQGLSCTITF 813
V +++ C +
Sbjct 844 QVKWGEEENAHCVANY 859
>P33397 Outer membrane usher protein HifC [Haemophilus influenzae]
Length=837
Score = 370 bits (949), Expect = 2e-118
Identities = 238/795 (30%), Positives = 395/795 (50%), Gaps = 42/795 (5%)
Query 14 LLLGIEAHAAEETFDTHFMMGG-MKGEQVTNLRLDDNQPLPGQYDIDIYVNKQWRGKYEI 72
LLL AE+ FD GG + G + N LPG+Y+ IYVN + +G+ +I
Sbjct 17 LLLANPVAWAEDQFDASLWGGGSVLGIDFARFNVK-NAVLPGRYEAQIYVNNEEKGESDI 75
Query 73 IVKDNPH----ETCLTREIVKRLGINSDNFAR-----ENQCLTFEQLVQGGSYSWDIGIF 123
I DNP E C T ++ + L + + + ++ C+ + G++ + G
Sbjct 76 IFADNPATGRAELCFTPKLQEMLDLMDEAIVKSPNSEDDTCVFASDAIPKGTFDYQGGDM 135
Query 124 RLDLAVPQAWVEELENGYVPPENWERGINAFYTSYYVSQYYSDYKASGNSKSTYVRFNSG 183
+L L +PQA GY+ P W+ G NA + +Y ++ YY S+S YV G
Sbjct 136 KLKLEIPQALTIRRPRGYIAPSRWQTGTNAAFANYDIN-YYRSGNPEVKSESLYVGLRGG 194
Query 184 LNLLGWQLHSDASFSK---------TDNNPGEWKSNTLYLEHGFSQILGTLRIGDMYTSA 234
+N W L + SFS+ TD ++ YL+ F+ + G + +GD +++A
Sbjct 195 VNFGNWALRHNGSFSRFENQSSSGFTDKGKNHYERGDTYLQRDFALLRGNVTVGDFFSTA 254
Query 235 DIFDSVRFTGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPF 294
I ++ G+R+ D +ML S++ F P V+G+A +NA V+I+QNG+ +YQ VP GPF
Sbjct 255 RIGENFGLRGLRIASDDRMLAPSQRGFAPVVRGVANTNAKVSIKQNGYTIYQITVPAGPF 314
Query 295 SISDLQLAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASK 354
I+DL +G DL V ++E+DG V +++VP++ + +++ G +Y A GR I+ +
Sbjct 315 VINDLYASGYSGDLTVEIQESDGKVRSFIVPFSNLAPLMRVGHLRYQLAGGRYRIDSRTF 374
Query 355 QSDFVQAGYQYGFNNLLTLYGGTMVANNYYAFTLGTGWNTRIGAISVDATKSHSKQDNGD 414
+Q QYG N LTL + +Y A G G NT IGA S DAT SH++
Sbjct 375 DERVLQGVLQYGLTNHLTLNSSLLYTRHYRAGLFGFGLNTPIGAFSADATWSHAEFPLKK 434
Query 415 VF-DGQSYQIAYNKFLSQTSTRFGLAAWRYSSRDYRTFNDYVWANNKDNYRRDKNDVYDI 473
V +G S +Y+ ++ T LAA+RYSSRD+ T +D + N +R+
Sbjct 435 VSKNGYSLHGSYSINFNEIGTNLTLAAYRYSSRDFYTLSDTIGLNR--TFRQFS------ 486
Query 474 ADYYQNDFGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRIS 533
Y + KN F ++SQSL WG++ LS +YW + G++ YQ++YSN++ ++
Sbjct 487 GAYLPEIYRPKNQFQVSLSQSL-GNWGNLYLSGQTYNYWEKRGTNTQYQVAYSNSFHILN 545
Query 534 YTLAASQAYDENHAEEKRFNIFISIPFDWGDDVTTPRRQIYMSNSTTFDDQGFASNNTGL 593
Y++ SQ+ D+ + +I++S+ GD+ + ++S+ + G+
Sbjct 546 YSVNLSQSIDKETGKRDN-SIYLSLSLPLGDN--------HSADSSYSRSGNDINQRLGV 596
Query 594 SGTVGNRDQFNYGINLSHQHQGNETTAGANLTWTAPAATVNGSYSQSS-TYRQVGASVSG 652
+G+ G R Q++YGIN S +QG + G NL+ + SYS+ S R VSG
Sbjct 597 NGSFGERHQWSYGINASRNNQGYRSYDG-NLSHNNSIGSYRASYSRDSLKNRSTSLGVSG 655
Query 653 GLVAWSGGVNLANRLSETFAVMHAPGIKDAYVNGQKYRTTNCNGVVVYDGLTPYRENHLM 712
+VA G+ L+ + E+FA++HA A V + + G V +PY N++
Sbjct 656 AVVAHKYGITLSQPVGESFAIIHAKDAAGAKVESGANVSLDYFGNAVVPYTSPYEINYIG 715
Query 713 MDVSQSDSETELRGNRKMTAPYRGAVVLVDFDTDQRKPWFIKALRSDGQPLTFGYEVNDM 772
++ S +++ E + P ++ LVDF T + +G+P+ D
Sbjct 716 INPSDAEANVEFEATERQIIPRANSISLVDFRTGKNTMVLFNLTLPNGEPVPMASTAQDS 775
Query 773 HGHNIGVVGQGSQIF 787
G +G V QG +F
Sbjct 776 EGAFVGDVVQGGVLF 790
>P45997 Outer membrane usher protein HifC [Haemophilus influenzae]
Length=837
Score = 369 bits (948), Expect = 3e-118
Identities = 240/795 (30%), Positives = 393/795 (49%), Gaps = 42/795 (5%)
Query 14 LLLGIEAHAAEETFDTHFMMGG-MKGEQVTNLRLDDNQPLPGQYDIDIYVNKQWRGKYEI 72
LLL AE+ FD GG + G + N LPG+Y+ IYVN + +G+ +I
Sbjct 17 LLLANPVAWAEDQFDASLWGGGSVLGIDFARFNVK-NAVLPGRYEAQIYVNNEEKGESDI 75
Query 73 IVKDNPH----ETCLTREIVKRLGINSDNF-----ARENQCLTFEQLVQGGSYSWDIGIF 123
I DNP E C T ++ + L + + A ++ C+ + + G++ + G
Sbjct 76 IFADNPATGRAELCFTPKLQEMLDLMDEAIVKSPNAEDDTCVFASEAIPKGTFDYQGGDM 135
Query 124 RLDLAVPQAWVEELENGYVPPENWERGINAFYTSYYVSQYYSDYKASGNSKSTYVRFNSG 183
+L L +PQA GY+ P W+ G NA +Y ++ YY SKS YV G
Sbjct 136 KLKLELPQALTIRRPRGYIAPSRWQTGTNAASANYDIN-YYRSGNPEVKSKSLYVGLRGG 194
Query 184 LNLLGWQLHSDASFSK---------TDNNPGEWKSNTLYLEHGFSQILGTLRIGDMYTSA 234
+NL W L + SFS+ TD ++ YL+ F+ + G + +GD +++A
Sbjct 195 VNLGNWALRHNGSFSRFENHSSSGFTDKGKNHYERGDTYLQRDFALLRGNVTVGDFFSTA 254
Query 235 DIFDSVRFTGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPF 294
I +S G+R+ D +ML S++ F P V+G+A +NA V+I+QNG+ +YQ VP GPF
Sbjct 255 RIGESFGLRGLRIASDDRMLAPSQRGFAPVVRGVANTNAKVSIKQNGYTIYQITVPAGPF 314
Query 295 SISDLQLAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASK 354
I+DL +G DL V ++E+DG V +++VP++ + +++ G +Y A GR I+ +
Sbjct 315 VINDLYASGYSGDLTVEIQESDGKVRSFIVPFSNLAPLMRVGHLRYQLAGGRYRIDSRTF 374
Query 355 QSDFVQAGYQYGFNNLLTLYGGTMVANNYYAFTLGTGWNTRIGAISVDATKSHSKQDNGD 414
+Q QYG N LTL + +Y A G G NT IGA S DAT SH++
Sbjct 375 DERVLQGVLQYGLTNHLTLNSSLLYTRHYRAGLFGFGLNTPIGAFSADATWSHAEFPLKK 434
Query 415 VF-DGQSYQIAYNKFLSQTSTRFGLAAWRYSSRDYRTFNDYVWANNKDNYRRDKNDVYDI 473
V +G S +Y+ ++ T LAA+RYSSRD+ T +D + N +++
Sbjct 435 VSKNGYSLHGSYSINFNEIGTNLTLAAYRYSSRDFYTLSDTIGLNR--TFKQFS------ 486
Query 474 ADYYQNDFGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRIS 533
Y + KN F ++SQSL WG++ LS +YW + G++ YQL+Y+N + ++
Sbjct 487 GAYLPEIYRPKNQFQVSLSQSL-GNWGNLYLSGQTYNYWEKRGTNTQYQLAYANRFHILN 545
Query 534 YTLAASQAYDENHAEEKRFNIFISIPFDWGDDVTTPRRQIYMSNSTTFDDQGFASNNTGL 593
Y++ SQ+ D+ + +I++S+ GD+ + ++S+ + G+
Sbjct 546 YSINLSQSIDKETGKRDN-SIYLSLSLPLGDN--------HSADSSYSRSGNDINQRLGV 596
Query 594 SGTVGNRDQFNYGINLSHQHQGNETTAGANLTWTAPAATVNGSYSQSS-TYRQVGASVSG 652
+G+ G R Q++YGIN S +QG + ANL + SYS+ S R SG
Sbjct 597 NGSFGERHQWSYGINASRNNQGYR-SYDANLAHNNSIGSYRASYSRDSLKNRSTSLGASG 655
Query 653 GLVAWSGGVNLANRLSETFAVMHAPGIKDAYVNGQKYRTTNCNGVVVYDGLTPYRENHLM 712
+VA G+ L+ + E+FA++HA A V + + G V +PY N++
Sbjct 656 AVVAHKYGITLSQPVGESFAIIHAKDAAGAKVESGANVSLDYFGNAVVPYTSPYEINYIG 715
Query 713 MDVSQSDSETELRGNRKMTAPYRGAVVLVDFDTDQRKPWFIKALRSDGQPLTFGYEVNDM 772
++ S +++ E + P ++ LVDF T + +G+P+ D
Sbjct 716 INPSDAEANVEFEATERQIIPRANSISLVDFRTGKNTMVLFNLTLPNGEPVPMASTAQDS 775
Query 773 HGHNIGVVGQGSQIF 787
G +G V QG +F
Sbjct 776 EGAFVGDVVQGGVLF 790
>P46009 Outer membrane usher protein FocD [Escherichia coli]
Length=875
Score = 367 bits (941), Expect = 7e-117
Identities = 231/785 (29%), Positives = 385/785 (49%), Gaps = 28/785 (4%)
Query 53 PGQYDIDIYVNKQWRG----KYEIIVKDNPHETCLTREIVKRLGINS---DNFAR--ENQ 103
PG Y +DIY+N + ++++ CL+ E + +G+N R +
Sbjct 76 PGVYRVDIYLNDTYISTRDVQFQMSQDGKQLAPCLSPEHMSAMGVNRYAVPGMERLPADT 135
Query 104 CLTFEQLVQGGSYSWDIGIFRLDLAVPQAWVEELENGYVPPENWERGINAFYTSYYVSQY 163
C + ++QG ++ +D+G RL L VPQ ++ GY+ PE W+ GI A +Y S
Sbjct 136 CTSLNSMIQGATFRFDVGQQRLYLTVPQLYMSNQARGYIAPEYWDNGITAALLNYDFSGN 195
Query 164 YSDYKASGNSKSTYVRFNSGLNLLGWQLHSDASFSKTDN---NPGEWKSNTLYLEHGFSQ 220
G S Y+ +GLN+ W+L + S+S + + W+ +LE
Sbjct 196 RVRDTYGGTSDYAYLNLKTGLNIGSWRLRDNTSWSYSAGKGYSQNNWQHINTWLERDIVS 255
Query 221 ILGTLRIGDMYTSADIFDSVRFTGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQN 280
+ L +GD YT DIFD V F G++L D M+P+S++ + P + GI++ + ++I QN
Sbjct 256 LRSRLTMGDSYTRGDIFDGVNFRGIQLASDDNMVPDSQRGYAPTIHGISRGTSRISIRQN 315
Query 281 GFVVYQKEVPPGPFSISDLQLAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKY 340
G+ +YQ +PPGPF I+D+ AG G DL V+++EADGSV + VP+++VP + + G KY
Sbjct 316 GYEIYQSTLPPGPFEINDIYPAGSGGDLQVTLQEADGSVQRFNVPWSSVPVLQREGHLKY 375
Query 341 DFAAGRSHIEGASKQSD-FVQAGYQYGFNNLLTLYGGTMVANNYYAFTLGTGWNTR-IGA 398
+AG G + + F + +YG + T+YGG +A Y AF LG G N +GA
Sbjct 376 ALSAGEFRSGGHQQDNPRFAEGTLKYGLPDGWTVYGGAWIAERYRAFNLGVGKNMGWLGA 435
Query 399 ISVDATKSHSKQDNGDVFDGQSYQIAYNKFLSQTSTRFGLAAWRYSSRDYRTFNDYVWAN 458
+S+DAT+++++ + DGQSY+ YNK L++T T L +RYS+R Y TF D W
Sbjct 436 VSLDATRANARLPDESRHDGQSYRFLYNKSLTETGTNIQLIGYRYSTRGYFTFADTAWKK 495
Query 459 NKDNYRRDKNDVYDI----ADYYQNDFGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGR 514
++ V I DYY + ++ A Q ++ LS + YWG
Sbjct 496 MSGYSVLTQDGVIQIQPKYTDYYNLAYNKRE--GAGEYQPADGESSTLYLSGSHQSYWGT 553
Query 515 SGSSKDYQLSYSNNWRRISYTLAASQAYDE-NHAEEKRFNIFISIPFD-W-GDDVTTPRR 571
+ + ++++ IS++L S + + H ++ + +SIPF W D T+ R
Sbjct 554 DRTDRQLNAGFNSSVNDISWSLNYSLSRNAWQHETDRILSFDVSIPFSHWMRSDSTSAWR 613
Query 572 QIYMSNSTTFDDQGFASNNTGLSGTVGNRDQFNYGINLSHQ---HQGNETTAGANLTWTA 628
S T + G A++ GL GT+ + Y I + ++G+ T A+L +
Sbjct 614 NASARYSQTLEAHGQAASTAGLYGTLLGDNNLGYSIQSGYTRGGYEGSSKTGYASLNYRG 673
Query 629 PAATVNGSYSQSSTYRQVGASVSGGLVAWSGGVNLANRLSETFAVMHAPGIKDAYVNGQK 688
+ YS S YRQ+ +SGG++A + G+ L+ L +T ++ APG D + Q
Sbjct 674 GYGNASAGYSHSGGYRQLYYGLSGGILAHANGLTLSQPLGDTLILVRAPGASDTRIENQT 733
Query 689 YRTTNCNGVVVYDGLTPYRENHLMMDVSQSDSETELRGNRKMTAPYRGAVVLVDFDTDQR 748
+T+ G V T YREN + +D + ++ P GAVV D+ T
Sbjct 734 GVSTDWRGYAVLPYATDYRENRVALDTNTLADNVDIENTVVSVVPTHGAVVRADYKTRVG 793
Query 749 KPWFIKALRSDGQPLTFGYEVNDMHGHNIGVVGQGSQIFIRTNEIPPAVNVAIDKQQGLS 808
+ +R +G+ + FG V +G + + G+ Q+++ + V+V Q
Sbjct 794 VKVLMTLMR-NGKAVPFGSVVTARNGGS-SIAGENGQVYLSGMPLSGQVSVKWGSQTTDQ 851
Query 809 CTITF 813
CT +
Sbjct 852 CTADY 856
>P75857 Probable outer membrane usher protein ElfC [Escherichia
coli (strain K12)]
Length=866
Score = 365 bits (937), Expect = 2e-116
Identities = 238/756 (31%), Positives = 378/756 (50%), Gaps = 41/756 (5%)
Query 37 KGEQVTNLRLDDNQPLPGQYDIDIYVNKQWRGKYEI----IVKDNPHETCLTREIVKRLG 92
KG+++T PG Y +DI +N+ + I + CLT E + +G
Sbjct 59 KGQKIT----------PGVYRVDIVLNQTIVDTRNVNFVEITPEKGIAACLTTESLDAMG 108
Query 93 INSDNFARENQ-----CLTFEQLVQGGSYSWDIGIFRLDLAVPQAWVEELENGYVPPENW 147
+N+D F Q C+ +++ S ++++ RL+++VPQ ++ GYVPPE W
Sbjct 109 VNTDAFPAFKQLDKQACVPLAEIIPDASVTFNVNKLRLEISVPQIAIKSNARGYVPPERW 168
Query 148 ERGINAFYTSYYVSQYYSDYKA--SGNSKSTYVRFNSGLNLLGWQLHSDASFSKTDNNPG 205
+ GINA Y S S + + S + S ++ NSG+NL W+L +++++S++
Sbjct 169 DEGINALLLGYSFSGANSIHSSADSDSGDSYFLNLNSGVNLGPWRLRNNSTWSRSSGQTA 228
Query 206 EWKSNTLYLEHGFSQILGTLRIGDMYTSADIFDSVRFTGVRLFRDMQMLPNSKQNFTPRV 265
EWK+ + YL+ + G L +GD YT+ D FDSV F GV+L D MLP+S + F P V
Sbjct 229 EWKNLSSYLQRAVIPLKGELTVGDDYTAGDFFDSVSFRGVQLASDDNMLPDSLKGFAPVV 288
Query 266 QGIAQSNALVTIEQNGFVVYQKEVPPGPFSISDLQLAGGGADLDVSVKEADGSVTTYLVP 325
+GIA+SNA +TI+QNG+ +YQ V PG F ISDL DL V +KEADGSV +Y VP
Sbjct 289 RGIAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVP 348
Query 326 YAAVPNMLQPGVSKYDFAAGRSHIEGASKQ-SDFVQAGYQYGFNNLLTLYGGTMVANNYY 384
+++VP + + G KY + +Q S F QA Q+G T YGG A Y
Sbjct 349 FSSVPLLQRQGRIKYAVTLAKYRTNSNEQQESKFAQATLQWGGPWGTTWYGGGQYAEYYR 408
Query 385 AFTLGTGWNT-RIGAISVDATKSHSKQDNGDVFDGQSYQIAYNKFLSQTSTRFGLAAWRY 443
A G G+N GAIS DAT++ S + GQSY+ Y K L+ T F L +RY
Sbjct 409 AAMFGLGFNLGDFGAISFDATQAKSTLADQSEHKGQSYRFLYAKTLNHLGTNFQLMGYRY 468
Query 444 SSRDYRTFNDYVWANNKDNYRRDKNDVYDI---ADYYQNDFGRKNSFSANMSQSLPEGWG 500
S+ + T +D ++ + D Y + D D + YY + ++ N+SQ L E +G
Sbjct 469 STSGFYTLSDTMY-KHMDGYEFNDGDDEDTPMWSRYYNLFYTKRGKLQVNISQQLGE-YG 526
Query 501 SVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRISYTLAASQAYDENHAE---EKRFNIFIS 557
S LS + YW + Q Y+ + +S L S Y ++ + ++ F + S
Sbjct 527 SFYLSGSQQTYWHTDQQDRLLQFGYNTQIKDLS--LGISWNYSKSRGQPDADQVFALNFS 584
Query 558 IPFDW-----GDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGNRDQFNYGINLSHQ 612
+P + D T + +M+++T+ D++G + N GL+ T+ + +Y + +
Sbjct 585 LPLNLLLPRSNDSYTRKKNYAWMTSNTSIDNEGHTTQNLGLTETLLDDGNLSYSVQQGYN 644
Query 613 HQGNETTAGANLTWTA--PAATVNGSYSQSSTYRQVGASVSGGLVAWSGGVNLANRLSET 670
+G A++ + A V +YS + + +Q+ ++SG LVA S G+ L L ET
Sbjct 645 SEGKTANGSASMDYKGAFADARVGYNYSDNGSQQQLNYALSGSLVAHSQGITLGQSLGET 704
Query 671 FAVMHAPGIKDAYVNGQKYRTTNCNGVVVYDGLTPYRENHLMMDVSQSDSETELRGNRKM 730
++ APG ++ V T+ G V T YREN + +D + +L
Sbjct 705 NVLIAAPGAENTRVANSTGLKTDWRGYTVVPYATSYRENRIALDAASLKRNVDLENAVVN 764
Query 731 TAPYRGAVVLVDFDTDQRKPWFIKALRSDGQPLTFG 766
P +GA+VL +F+ +K + G PL FG
Sbjct 765 VVPTKGALVLAEFNAHAGARVLMKTSK-QGIPLRFG 799
>P45998 Outer membrane usher protein HifC [Haemophilus influenzae]
Length=837
Score = 364 bits (934), Expect = 3e-116
Identities = 231/794 (29%), Positives = 394/794 (50%), Gaps = 41/794 (5%)
Query 49 NQPLPGQYDIDIYVNKQWRGKYEIIVKDNPH----ETCLTREIVKRLGINSDNFAR---- 100
N LPG+Y+ IYV + +G +II DNP E C T ++ + L + + +
Sbjct 52 NAVLPGRYEAQIYVKFEEKGVSDIIFADNPATGRTELCFTPKLQEMLDLMDEAIVKSPNS 111
Query 101 -ENQCLTFEQLVQGGSYSWDIGIFRLDLAVPQAWVEELENGYVPPENWERGINAFYTSYY 159
++ C+ + G++ + G +L L +PQA GY+ P W+ G NA + +Y
Sbjct 112 EDDTCVFASDAIPKGTFEYQSGEMKLKLELPQALTIRRPRGYIAPSRWQTGTNAAFANYD 171
Query 160 VSQYYSDYKASGNSKSTYVRFNSGLNLLGWQLHSDASFSK---------TDNNPGEWKSN 210
++ YY S+S YV SG+N W L SFS+ TD ++
Sbjct 172 IN-YYRSGNPEVKSESLYVGLRSGVNFGNWALRHSGSFSRFENQSSSGFTDKGKNHYERG 230
Query 211 TLYLEHGFSQILGTLRIGDMYTSADIFDSVRFTGVRLFRDMQMLPNSKQNFTPRVQGIAQ 270
YL+ F+ + G + +GD +++A I ++ G+R+ D +ML S++ F P V+G+A
Sbjct 231 DTYLQRDFALLRGNVTVGDFFSTARIGENFGMRGLRIASDDRMLAPSQRGFAPVVRGVAN 290
Query 271 SNALVTIEQNGFVVYQKEVPPGPFSISDLQLAGGGADLDVSVKEADGSVTTYLVPYAAVP 330
+NA V+I+QNG+ +YQ VP GPF I+DL +G DL V ++E+DG V +++VP++ +
Sbjct 291 TNAKVSIKQNGYTIYQITVPAGPFVINDLYASGYSGDLTVEIQESDGKVRSFIVPFSNLA 350
Query 331 NMLQPGVSKYDFAAGRSHIEGASKQSDFVQAGYQYGFNNLLTLYGGTMVANNYYAFTLGT 390
+++ G +Y A GR I+ + +Q QYG N LTL + +Y A G
Sbjct 351 PLMRVGHLRYQLAGGRYRIDSRTFDERVLQGVLQYGLTNHLTLNSSLLYTRHYRAGLFGF 410
Query 391 GWNTRIGAISVDATKSHSKQDNGDVF-DGQSYQIAYNKFLSQTSTRFGLAAWRYSSRDYR 449
G NT IGA S DAT SH++ V +G S +Y+ +++ T LAA+RYSSRD+
Sbjct 411 GLNTPIGAFSADATWSHAEFPLKHVSKNGYSLHGSYSINFNESGTNITLAAYRYSSRDFY 470
Query 450 TFNDYVWANNKDNYRRDKNDVYDIADYYQNDFGRKNSFSANMSQSLPEGWGSVSLSTLWR 509
T +D + N +R+ Y + KN F ++SQSL WG++ LS
Sbjct 471 TLSDTIGLNR--TFRQFS------GAYLPEIYRPKNQFQVSLSQSL-GNWGNLYLSGQTY 521
Query 510 DYWGRSGSSKDYQLSYSNNWRRISYTLAASQAYDENHAEEKRFNIFISIPFDWGDDVTTP 569
+YW + G++ YQ++YSN++ ++Y++ SQ+ D+ + +I++S+ GD+
Sbjct 522 NYWEKRGTNTQYQVAYSNSFHILNYSVNLSQSIDKETGKRDN-SIYLSLSLPLGDN---- 576
Query 570 RRQIYMSNSTTFDDQGFASNNTGLSGTVGNRDQFNYGINLSHQHQGNETTAGANLTWTAP 629
+ ++S+ + G++G+ G R Q++YGIN S +QG + G NL+
Sbjct 577 ----HSADSSYSRSGNDINQRLGVNGSFGERHQWSYGINASRNNQGYRSYDG-NLSHNNS 631
Query 630 AATVNGSYSQSS-TYRQVGASVSGGLVAWSGGVNLANRLSETFAVMHAPGIKDAYVNGQK 688
+ SYS+ S R + SG +VA G+ L+ + E+FA++HA A V
Sbjct 632 IGSYRASYSRDSLKNRSISLGASGAVVAHKHGITLSQPVGESFAIIHAKDAAGAKVESGA 691
Query 689 YRTTNCNGVVVYDGLTPYRENHLMMDVSQSDSETELRGNRKMTAPYRGAVVLVDFDTDQR 748
+ + G V +PY N++ ++ S +++ E + P ++ LVDF T +
Sbjct 692 NVSLDYFGNAVMPYTSPYEINYIGINPSDAEANVEFEATERQIIPRANSISLVDFRTGKN 751
Query 749 KPWFIKALRSDGQPLTFGYEVNDMHGHNIGVVGQGSQIFIRTNEIPPA-VNVAIDKQQGL 807
+G+P+ D G +G V QG +F P + V +++
Sbjct 752 TMVLFNLTLPNGEPVPMASTAQDSEGAFVGDVVQGGVLFANKLTQPKGELIVKWGERESE 811
Query 808 SCTITFGKEIDESK 821
C + ++D ++
Sbjct 812 QCRFQYQVDLDNAQ 825
>Q8XDD1 Probable outer membrane usher protein ElfC [Escherichia
coli O157:H7]
Length=866
Score = 362 bits (929), Expect = 3e-115
Identities = 236/756 (31%), Positives = 377/756 (50%), Gaps = 41/756 (5%)
Query 37 KGEQVTNLRLDDNQPLPGQYDIDIYVNKQWRGKYEI----IVKDNPHETCLTREIVKRLG 92
KG+++T PG Y +DI +N+ + I + CLT E + +G
Sbjct 59 KGQKIT----------PGVYRVDIVLNQTIVDTRNVNFVEITPEKGIAACLTTESLDAMG 108
Query 93 INSDNFARENQ-----CLTFEQLVQGGSYSWDIGIFRLDLAVPQAWVEELENGYVPPENW 147
+N+D F Q C +++ S ++++ RL+++VPQ ++ GYVPPE W
Sbjct 109 VNTDAFPAFKQLDKQACAPLAEIIPDASVTFNVNKLRLEISVPQIAIKSNARGYVPPERW 168
Query 148 ERGINAFYTSYYVSQYYSDYKA--SGNSKSTYVRFNSGLNLLGWQLHSDASFSKTDNNPG 205
+ GINA Y S S + + S + S ++ NSG+NL W+L +++++S++
Sbjct 169 DEGINALLLGYSFSGANSIHSSADSDSGDSYFLNLNSGVNLGPWRLRNNSTWSRSSGQTA 228
Query 206 EWKSNTLYLEHGFSQILGTLRIGDMYTSADIFDSVRFTGVRLFRDMQMLPNSKQNFTPRV 265
EWK+ + YL+ + G L +GD YT+ D FDSV F GV+L D MLP+S + F P V
Sbjct 229 EWKNLSSYLQRAVIPLKGELTVGDDYTAGDFFDSVSFRGVQLASDDNMLPDSLKGFAPVV 288
Query 266 QGIAQSNALVTIEQNGFVVYQKEVPPGPFSISDLQLAGGGADLDVSVKEADGSVTTYLVP 325
+GIA+SNA +TI+QNG+ +YQ V PG F ISD+ DL V +KEADGSV +Y VP
Sbjct 289 RGIAKSNAQITIKQNGYTIYQTYVSPGAFEISDIYSTSSSGDLLVEIKEADGSVNSYSVP 348
Query 326 YAAVPNMLQPGVSKYDFAAGRSHIEGASKQ-SDFVQAGYQYGFNNLLTLYGGTMVANNYY 384
+++VP + + G KY + +Q S F QA Q+G T YGG A Y
Sbjct 349 FSSVPLLQRQGRIKYAVTLAKYRTNSNEQQESKFAQATLQWGGPWGTTWYGGGQYAEYYR 408
Query 385 AFTLGTGWNT-RIGAISVDATKSHSKQDNGDVFDGQSYQIAYNKFLSQTSTRFGLAAWRY 443
A G G+N GAIS D T++ S + GQSY+ Y K L+Q T F L +RY
Sbjct 409 AAMFGLGFNLGDFGAISFDVTQAKSTLADQSEHKGQSYRFLYAKTLNQLGTNFQLMGYRY 468
Query 444 SSRDYRTFNDYVWANNKDNYRRDKNDVYDI---ADYYQNDFGRKNSFSANMSQSLPEGWG 500
S+ + T +D ++ + D Y + D D + YY + ++ N+SQ L E +G
Sbjct 469 STSGFYTLSDTMY-KHMDGYEFNDGDDEDTPMWSRYYNLFYTKRGKLQVNISQQLSE-YG 526
Query 501 SVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRISYTLAASQAYDENHAE---EKRFNIFIS 557
S LS + YW + Q Y+ + +S L S Y ++ + ++ F + S
Sbjct 527 SFYLSGSQQTYWHTDQQDRLLQFGYNTQIKDLS--LGISWNYSKSRGQPDADQVFALNFS 584
Query 558 IPFDW-----GDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGNRDQFNYGINLSHQ 612
+P + D T+ + +M+++T+ D++G + N GL+ T+ + +Y + +
Sbjct 585 LPLNLLLSRSNDSYTSKKNYAWMTSNTSIDNEGHTTQNLGLTETLLDDGNLSYSVQQGYN 644
Query 613 HQGNETTAGANLTWTA--PAATVNGSYSQSSTYRQVGASVSGGLVAWSGGVNLANRLSET 670
+G A++ + A V +YS + + +Q+ ++SG LVA S G+ L L ET
Sbjct 645 SEGKTANGSASMDYKGVFADARVGYNYSDNGSQQQLNYALSGSLVAHSQGITLGQSLGET 704
Query 671 FAVMHAPGIKDAYVNGQKYRTTNCNGVVVYDGLTPYRENHLMMDVSQSDSETELRGNRKM 730
++ APG ++ V T+ G V T YREN + +D + +L
Sbjct 705 NVLIAAPGAENTRVANSTGLKTDWRGYTVVPYATSYRENRIALDAASLKRNVDLENAVVN 764
Query 731 TAPYRGAVVLVDFDTDQRKPWFIKALRSDGQPLTFG 766
P +GA+VL +F+ +K + G L FG
Sbjct 765 VVPTKGALVLAEFNAHAGARVLMKTSK-QGISLRFG 799
>P43662 Outer membrane usher protein LpfC [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=842
Score = 341 bits (874), Expect = 2e-107
Identities = 235/831 (28%), Positives = 394/831 (47%), Gaps = 56/831 (7%)
Query 12 VALLLGIEAHAAEETFDTHFMMGGMKGEQVTNLRLDDN---QPLPGQYDIDIYVNKQWRG 68
+AL++ A TF+ F+ +Q +L + ++ + LPG+Y + + VN++
Sbjct 20 LALMIAGTLPAYAGTFNPRFLEDVPGIDQHVDLSMYESNKAEHLPGKYRVSVVVNEKKME 79
Query 69 KYEIIVKDNPHET----------CLTREIVKRLGINSDNF-----ARENQCLTFEQLVQG 113
+ K CL+R ++ +G+ D+F A C+ F+ ++
Sbjct 80 SRTLEFKAATEAQRAKMGESLVPCLSRVQLEDMGVRIDSFPALKMAPPEACVAFDDIIPQ 139
Query 114 GSYSWDIGIFRLDLAVPQAWVEELENGYVPPENWERGINAFYTSYYVSQYYSDYKA---- 169
+ +D L ++ PQA +++ G VP W+ G+NA Y S + Y A
Sbjct 140 AASHFDFADQTLIMSFPQAAMKQTARGTVPESQWDEGVNALLVDYNFSGSNASYDAHDSE 199
Query 170 -SGNSKSTYVRFNSGLNLLGWQLHSDASFSKTDNNPGEWKSNTLYLEHGFSQILGTLRIG 228
S NS S Y+ SG+NL W+L + +++++ D N W + L + L +G
Sbjct 200 TSYNSDSYYLNLRSGMNLGAWRLRNYSTWTRNDGN-NTWDNIGTSLSRAIVPLKSQLTLG 258
Query 229 DMYTSADIFDSVRFTGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKE 288
D T+ DIFDSV+ GV+L D +MLP+S++ F P ++GIA+SNA VT+EQN +V+Y+
Sbjct 259 DTSTAGDIFDSVQMRGVQLTSDEEMLPDSQRGFAPVIRGIAKSNAEVTVEQNNYVIYRTF 318
Query 289 VPPGPFSISDLQLAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKYDFAAGRSH 348
V PG F I+DL DL V++KE+DGS ++ P+++V + + G KY +AG
Sbjct 319 VQPGAFEINDLYPTSNSGDLTVTIKESDGSEQKFVQPFSSVALLQREGHLKYSLSAGEYR 378
Query 349 IEG-ASKQSDFVQAGYQYGFNNLLTLYGGTMVANNYYAFTLGTGWN-TRIGAISVDATKS 406
S + F Q YG T+YGG + +++YY+ G G N IGAIS+D T++
Sbjct 379 AGNYNSAEPKFGQLDAMYGLPYGFTVYGGAIFSDDYYSLAGGLGKNFGYIGAISIDVTQA 438
Query 407 HSKQDNGDVFDGQSYQIAYNKFLSQTSTRFGLAAWRYSSRDYRTFNDYVWANNKDNYRRD 466
SK N + +GQSY+ Y+K + + T F L ++YS+ Y TF ++
Sbjct 439 KSKLANEENSEGQSYRFLYSKSFN-SGTDFRLLGYKYSTSGYYTF-------------QE 484
Query 467 KNDVYDIADYYQNDFGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYS 526
DV AD + + +++ N++Q L WGSV + +DYW G + Y+
Sbjct 485 ATDVRSDADSSYSQYHKRSQIQGNVTQQL-GAWGSVYFNVTQQDYWNDEGKQRSLNAGYN 543
Query 527 NNWRRISYTLAASQAYDENHAEEKRFNIFISIPFDWGDDVTTPRRQIYMSNSTTFDDQGF 586
R++Y++A + E R F ++ P +++ + T D G
Sbjct 544 GRIGRVNYSVAYTWTKSPEWDESDRLLSF---------SMSIPLGRVWSNYHLTTDQHGR 594
Query 587 ASNNTGLSGTVGNRDQFNYGINLSHQHQGNETTAGANLTWTAPAATVNGSYSQSSTYRQV 646
+ G+SGT NY + + G + NL + + + Y+ + +QV
Sbjct 595 TNQQLGVSGTALEDHNLNYSVQEGYGSNGVGNSGSVNLDYQGGVGSASLGYNYNRDGQQV 654
Query 647 GASVSGGLVAWSGGVNLANRLSETFAVMHAPGIKDAYV--NGQKYRTTNCNGVVVYDGLT 704
+ GG++A S G+ L+ L E+ A++ APG + A+V NG N VV Y LT
Sbjct 655 NYGLRGGVIAHSEGITLSQPLGESMAIISAPGARGAHVINNGGVEVDWMGNAVVPY--LT 712
Query 705 PYRENHLMMDVSQSDSETELRGNRKMTAPYRGAVVLVDFDTDQRKPWFIKALRSDGQPLT 764
PYRE + + +++ +L P RGA+V FDT + +++G+ +
Sbjct 713 PYRETEVSLRSDSLNNQVDLDTASVNVVPTRGAIVRARFDTRVGYRVLMNLTQANGKAVP 772
Query 765 FGYEVN--DMHGHNIGVVGQGSQIFIRTNEIPPAVNVAIDKQQGLSCTITF 813
FG D + +VG+ Q++I A+ V K Q C + F
Sbjct 773 FGATATLLDTTKESSSIVGEDGQLYISGMPEKGALQVNWGKDQAQQCRVAF 823
>P53517 Outer membrane usher protein AfaC [Escherichia coli]
Length=859
Score = 327 bits (839), Expect = 3e-102
Identities = 243/834 (29%), Positives = 394/834 (47%), Gaps = 78/834 (9%)
Query 4 MTPLASAIVALLLGIEAH---AAEETFDTHFMMGGMKGEQVTNLRLDDNQPLPGQYDIDI 60
+T LA A++ + A A +FD + GG KG +T ++ LPG Y +DI
Sbjct 13 VTGLALAVMVACVMFRAESGIARTYSFDAAMLKGGGKGVDLT--LFEEGGQLPGIYPVDI 70
Query 61 YVNKQWRGKYEII------VKDNPH-ETCLTREIVKRLGINSDNF--------------A 99
+N E+ + P+ +TCLTRE++ R G+ + +
Sbjct 71 ILNGSRVDSQEMAFHAERDAEGRPYLKTCLTREMLARYGVRIEEYPALFRASGEGRGASV 130
Query 100 RENQCLTFEQLVQGGSYSWDIGIFRLDLAVPQAWVEELENGYVPPENWERGINAFYTSYY 159
E C + Q + S+ +L L +PQ E + P W+ GI AF ++
Sbjct 131 AEEACADLTAIPQA-TESYQFAAQQLVLGIPQVAPSAAEGDW-PEALWDDGIPAFLLNWQ 188
Query 160 VSQYYSDYKASGN--SKSTYVRFNSGLNLLGWQLHSDASFSKTDNNPGEWKSNTLYLEHG 217
+ S+Y+ G + S +V G+N+ W++ + +++++ G+W+S+ + E G
Sbjct 189 ANAGRSEYRGYGKRVTDSYWVSLQPGINIGPWRVRNLTTWNRSSGQSGKWESSYIRAERG 248
Query 218 FSQILGTLRIGDMYTSADIFDSVRFTGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTI 277
+ I L +G+ YT +DIFDSV F G + D M+P + + F P V+GIA++ A + +
Sbjct 249 LNGIKSRLTLGEDYTPSDIFDSVPFRGAMMSSDESMVPYNLREFAPVVRGIARTQARIEV 308
Query 278 EQNGFVVYQKEVPPGPFSISDLQLAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGV 337
QNG+++ + V PG F+++DL + G G+DL V+V E+DG+ + VP+ L+ G
Sbjct 309 RQNGYLIQSQTVAPGAFALTDLPVTGSGSDLQVTVLESDGTAQVFTVPFTTPAIALREGY 368
Query 338 SKYDFAAGR-SHIEGASKQSDFVQAGYQYGFNNLLTLYGGTMVANNYYAFTLGTGWNT-R 395
KY+ AG+ + A + + Q YG LT+YGG A++Y + LG GW+ R
Sbjct 369 LKYNVTAGQYRSSDDAVEHTSLGQVTAMYGLPWGLTVYGGLQGADDYQSAALGLGWSLGR 428
Query 396 IGAISVDATKSHSKQDNGDVFDGQSYQIAYNKFLSQTSTRFGLAAWRYSSRDYRTFNDYV 455
+GA+S+D T S +Q D G +++I YNK T T F A+++YSS Y T D +
Sbjct 429 LGAVSLDTTHSRGQQKGHDYETGDTWRIRYNKSFELTGTSFTAASYQYSSDGYHTLPDVL 488
Query 456 --WANNKDNYRRDKNDVYDIADYYQNDFGRKNSFSANMSQSLPEGWGSVSLS-------- 505
W +++ YR +N R + ++SQSL + WG V L+
Sbjct 489 DTWRDDRYAYRHTEN--------------RSRRTTLSLSQSLGQ-WGYVGLNGSRDEYRD 533
Query 506 TLWRDYWGRSGSSKDYQLSYSNNWRRISYTLAASQAYDENHAEEKRFNIFISIPFD-W-- 562
RDY+G S S+ +S S NW R + Y E ++++S+P W
Sbjct 534 RPHRDYFGASYSTSWNNISLSVNWSR---NRNSGGYYGGWSRTEDSVSMWMSVPLGRWFG 590
Query 563 --GDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGNRDQF-NYGINLSHQHQGNETT 619
+D++T + M ST D + GL+G +R + + + + + T
Sbjct 591 GADNDISTTAQ---MQRSTGQDTR----YEAGLNGRAFDRRLYWDVREQMVPGSESHADT 643
Query 620 AGANLTWTAPAATVNGSYSQSSTYRQVGASVSGGLVAWSGGVNLANRLSETFAVMHAPGI 679
+ NLTW + G YS SST RQ+ A +SG +VA S GV R +T A++ APG+
Sbjct 644 SRLNLTWYGTYGELTGMYSYSSTMRQLNAGMSGSMVAHSEGVTFGQRTGDTVALIAAPGV 703
Query 680 KDAYVNGQKYRTTNCNGVVVYDGLTPYRENHLMMDVSQSDSETELRGNRKMTAPYRGAVV 739
A V G T+ G + +PY+EN L +D + + E+ P +GAVV
Sbjct 704 SGASVGGWPGVRTDFRGYTLAGYASPYQENVLTLDPTTFPEDAEVPQTDSRVVPTKGAVV 763
Query 740 LVDFDTDQRKPWFIKALRSDGQPLTFGYEV-----NDMHGHNIGVVGQGSQIFI 788
F T + R DG PL FG V + GVVG ++++
Sbjct 764 RAGFRTRVGGRALVSLARQDGTPLPFGAVVTVEGERGQAAGSAGVVGDRGEVYL 817
>P33388 Outer membrane usher protein SefC [Salmonella enteritidis]
Length=814
Score = 308 bits (788), Expect = 2e-95
Identities = 222/759 (29%), Positives = 356/759 (47%), Gaps = 53/759 (7%)
Query 50 QPLPGQYDIDIYVNKQWRGKYEIIVKDNPH--ETCLTREIVKRLGI-----NSDNFAREN 102
+ LPG Y +D+Y+N Q + E+ K E CLT+E + + GI + F E
Sbjct 46 ETLPGNYVVDVYLNNQLKETTELYFKSMTQTLEPCLTKEKLIKYGIAIQELHGLQFDNE- 104
Query 103 QCLTFEQLVQGGSYSWDIGIFRLDLAVPQAWVEELENGYVPPENWERGINAFYTSYYVSQ 162
QC+ E Y+++ L L P + +++ W+ GINAF +Y +
Sbjct 105 QCVLLEHSPL--KYTYNAANQSLLLNAPSKILSPIDSEIADENIWDDGINAFLLNYRANY 162
Query 163 YYSDYKASGNSKSTYVRFNSGLNLLGWQLHSDASFSKTDNNPGEWKSNTLYLEHGFSQIL 222
+S G S + + G N W+L + +S+ + +++S +Y E G +I
Sbjct 163 LHSKV---GGEDSYFGQIQPGFNFGPWRLRNLSSWQNLSSEK-KFESAYIYAERGLKKIK 218
Query 223 GTLRIGDMYTSADIFDSVRFTGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGF 282
L +GD YTSAD+FDSV F G L +D M+P S++ + P ++GIA++NA V + QNG+
Sbjct 219 SKLTVGDKYTSADLFDSVPFRGFSLNKDESMIPFSQRTYYPTIRGIAKTNATVEVRQNGY 278
Query 283 VVYQKEVPPGPFSISDLQLAGGGAD---LDVSVKEADGSVTTYLVPYAAVPNMLQPGVSK 339
++Y VPPG F I Q+A G LDVS+ E +G V Y VPY+ L G SK
Sbjct 279 LIYSTSVPPGQFEIGREQIADLGVGVGVLDVSIYEKNGQVQNYTVPYSTPVLSLPDGYSK 338
Query 340 YDFAAGR-SHIEGASKQSDFVQAGYQYGFNNLLTLYGGTMVANNYYAFTLGTGWNT-RIG 397
Y GR + F + Y YG TL+GG N Y ++ +G + G
Sbjct 339 YSVTIGRYREVNNDYIDPVFFEGTYIYGLPYGFTLFGGVQWVNIYNSYAIGASKDIGEYG 398
Query 398 AISVDATKSHSKQDNGDVFDGQSYQIAYNKFLSQTSTRFGLAAWRYSSRDYRTFNDYVWA 457
A+S D S SK D + +G +Y I YNK ++QT+T LA+ Y S++YRTF++ + +
Sbjct 399 ALSFDWKTSVSKTDTSNE-NGHAYGIRYNKNIAQTNTEVSLASHYYYSKNYRTFSEAIHS 457
Query 458 NNKDNYRRDKNDVYDIADYYQNDFGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGS 517
+ D + DKN +K++ S +SQ+L GSV+LS + YW G
Sbjct 458 SEHDEF-YDKN--------------KKSTTSMLLSQAL-GSLGSVNLSYNYDKYWKHEG- 500
Query 518 SKDYQLSYSNNWR----RISYTLAASQAYDENHAEEKRFNIFISIPFDWGDDVTTPRRQI 573
K SY N +SYT + S+ +EN E F+ +S+P ++
Sbjct 501 KKSIIASYGKNLNGVSLSLSYTKSTSKISEEN---EDLFSFLLSVPLQ-----KLTNHEM 552
Query 574 YMSNSTTFDDQGFASNNTGLSGTVGNRDQFNYGINLSHQHQGNETTAGANLTWTAPAATV 633
Y + + + +++ G++G N N+ N +W +
Sbjct 553 YATYQNSSSSKHDMNHDLGITGVAFNSQLTWQARGQIEDKSKNQKATFLNASWRGTYGEI 612
Query 634 NGSYSQSSTYRQVGASVSGGLVAWSGGVNLANRLSETFAVMHAPGIKDAYVNGQKYRTTN 693
+YS + R +G +VSGG++A S G+ +S+T A++ A G+ A V G T+
Sbjct 613 GANYSHNEINRDIGMNVSGGVIAHSSGITFGQSISDTAALVEAKGVSGAKVLGLPGVRTD 672
Query 694 CNGVVVYDGLTPYRENHLMMDVSQSDSETELRGNRKMTAPYRGAVVLVDFDTDQRKPWFI 753
G + LTPY N + +D + T++R P GA+V + T I
Sbjct 673 FRGYTISSYLTPYMNNFISIDPTTLPINTDIRQTDIQVVPTEGAIVKAVYKTSVGTNALI 732
Query 754 KALRSDGQPLTFG----YEVNDMHGHNIGVVGQGSQIFI 788
+ R++G+PL G + ND + +VG+ Q ++
Sbjct 733 RITRTNGKPLALGTVLSLKNNDGVIQSTSIVGEDGQAYV 771
Lambda K H a alpha
0.317 0.133 0.405 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 7861750
Database: a8007273fa94811aa44f7ad1edf02953.SwissProt.fasta
Posted date: Jun 1, 2024 1:12 PM
Number of letters in database: 11,030
Number of sequences in database: 13
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
