BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 57aebb5519853f227eb79ffa952a9b91.SwissProt.fasta
           2 sequences; 120 total letters



Query= Z3048

Length=61
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P64517 Uncharacterized protein YodC [Escherichia coli (strain K12)]   126     1e-45
P64518 Uncharacterized protein YodC [Escherichia coli O157:H7]        126     1e-45


>P64517 Uncharacterized protein YodC [Escherichia coli (strain 
K12)]
Length=60

 Score = 126 bits (316),  Expect = 1e-45
 Identities = 60/60 (100%), Positives = 60/60 (100%), Gaps = 0/60 (0%)

Query  1   MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFHETELVPGEGSRSAEEV  60
           MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFHETELVPGEGSRSAEEV
Sbjct  1   MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFHETELVPGEGSRSAEEV  60


>P64518 Uncharacterized protein YodC [Escherichia coli O157:H7]
Length=60

 Score = 126 bits (316),  Expect = 1e-45
 Identities = 60/60 (100%), Positives = 60/60 (100%), Gaps = 0/60 (0%)

Query  1   MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFHETELVPGEGSRSAEEV  60
           MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFHETELVPGEGSRSAEEV
Sbjct  1   MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFHETELVPGEGSRSAEEV  60



Lambda      K        H        a         alpha
   0.323    0.138    0.424    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 5512


  Database: 57aebb5519853f227eb79ffa952a9b91.SwissProt.fasta
    Posted date:  May 31, 2024  4:51 AM
  Number of letters in database: 120
  Number of sequences in database:  2



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40