BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 0259a02a7eea4b8c7610b6b0df18df14.TrEMBL.fasta
5 sequences; 688 total letters
Query= Z3018
Length=138
Score E
Sequences producing significant alignments: (Bits) Value
S1EWC5 Lipoprotein [Escherichia coli KTE73] 280 1e-103
C3T502 Lipoprotein [Escherichia coli] 280 1e-103
A0A1X3IZG1 YedD [Escherichia coli TA447] 280 1e-103
D6IBN5 YedD protein [Escherichia coli B185] 280 1e-103
U9ZWL1 Lipoprotein [Escherichia coli 909945-2] 280 1e-103
>S1EWC5 Lipoprotein [Escherichia coli KTE73]
Length=137
Score = 280 bits (717), Expect = 1e-103
Identities = 137/137 (100%), Positives = 137/137 (100%), Gaps = 0/137 (0%)
Query 1 MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTK 60
MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTK
Sbjct 1 MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTK 60
Query 61 EGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPT 120
EGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPT
Sbjct 61 EGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPT 120
Query 121 AECAAALDKAPLPTPLP 137
AECAAALDKAPLPTPLP
Sbjct 121 AECAAALDKAPLPTPLP 137
>C3T502 Lipoprotein [Escherichia coli]
Length=137
Score = 280 bits (717), Expect = 1e-103
Identities = 137/137 (100%), Positives = 137/137 (100%), Gaps = 0/137 (0%)
Query 1 MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTK 60
MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTK
Sbjct 1 MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTK 60
Query 61 EGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPT 120
EGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPT
Sbjct 61 EGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPT 120
Query 121 AECAAALDKAPLPTPLP 137
AECAAALDKAPLPTPLP
Sbjct 121 AECAAALDKAPLPTPLP 137
>A0A1X3IZG1 YedD [Escherichia coli TA447]
Length=138
Score = 280 bits (717), Expect = 1e-103
Identities = 137/137 (100%), Positives = 137/137 (100%), Gaps = 0/137 (0%)
Query 1 MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTK 60
MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTK
Sbjct 2 MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTK 61
Query 61 EGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPT 120
EGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPT
Sbjct 62 EGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPT 121
Query 121 AECAAALDKAPLPTPLP 137
AECAAALDKAPLPTPLP
Sbjct 122 AECAAALDKAPLPTPLP 138
>D6IBN5 YedD protein [Escherichia coli B185]
Length=138
Score = 280 bits (717), Expect = 1e-103
Identities = 137/137 (100%), Positives = 137/137 (100%), Gaps = 0/137 (0%)
Query 1 MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTK 60
MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTK
Sbjct 2 MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTK 61
Query 61 EGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPT 120
EGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPT
Sbjct 62 EGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPT 121
Query 121 AECAAALDKAPLPTPLP 137
AECAAALDKAPLPTPLP
Sbjct 122 AECAAALDKAPLPTPLP 138
>U9ZWL1 Lipoprotein [Escherichia coli 909945-2]
Length=138
Score = 280 bits (717), Expect = 1e-103
Identities = 137/137 (100%), Positives = 137/137 (100%), Gaps = 0/137 (0%)
Query 1 MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTK 60
MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTK
Sbjct 2 MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTK 61
Query 61 EGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPT 120
EGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPT
Sbjct 62 EGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPT 121
Query 121 AECAAALDKAPLPTPLP 137
AECAAALDKAPLPTPLP
Sbjct 122 AECAAALDKAPLPTPLP 138
Lambda K H a alpha
0.320 0.136 0.416 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 63619
Database: 0259a02a7eea4b8c7610b6b0df18df14.TrEMBL.fasta
Posted date: Jun 1, 2024 5:02 PM
Number of letters in database: 688
Number of sequences in database: 5
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40