BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: cd13fd957521360ba11dde3752abfa6e.TrEMBL.fasta
           3 sequences; 288 total letters



Query= Z2900

Length=97
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

E0J4X5 Conserved protein regulated by LexA [Escherichia coli (str...  189     4e-69
A0A828UA70 YebG family protein [Escherichia coli DEC2D]               189     4e-69
D6IBF9 DNA damage-inducible protein YebG [Escherichia coli B185]      189     4e-69


>E0J4X5 Conserved protein regulated by LexA [Escherichia coli 
(strain ATCC 9637 / CCM 2024 / DSM 1116 / LMG 11080 / NBRC 13500 
/ NCIMB 8666 / NRRL B-766 / W)]
Length=96

 Score = 189 bits (480),  Expect = 4e-69
 Identities = 96/96 (100%), Positives = 96/96 (100%), Gaps = 0/96 (0%)

Query  1   MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW  60
           MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW
Sbjct  1   MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW  60

Query  61  LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA  96
           LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA
Sbjct  61  LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA  96


>A0A828UA70 YebG family protein [Escherichia coli DEC2D]
Length=96

 Score = 189 bits (480),  Expect = 4e-69
 Identities = 96/96 (100%), Positives = 96/96 (100%), Gaps = 0/96 (0%)

Query  1   MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW  60
           MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW
Sbjct  1   MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW  60

Query  61  LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA  96
           LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA
Sbjct  61  LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA  96


>D6IBF9 DNA damage-inducible protein YebG [Escherichia coli B185]
Length=96

 Score = 189 bits (480),  Expect = 4e-69
 Identities = 96/96 (100%), Positives = 96/96 (100%), Gaps = 0/96 (0%)

Query  1   MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW  60
           MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW
Sbjct  1   MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW  60

Query  61  LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA  96
           LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA
Sbjct  61  LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA  96



Lambda      K        H        a         alpha
   0.313    0.127    0.351    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 18960


  Database: cd13fd957521360ba11dde3752abfa6e.TrEMBL.fasta
    Posted date:  May 31, 2024  8:16 AM
  Number of letters in database: 288
  Number of sequences in database:  3



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40