Comparative Genomics

Z2751 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 8b900edea10cf326d8ef9b6cdcfc79a3.TrEMBL.fasta
           5 sequences; 1,260 total letters



Query= Z2751

Length=253
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A0A454A4K6 Salt-induced outer membrane protein [Escherichia coli ...  517     0.0   
U9ZJS3 Salt-induced outer membrane protein [Escherichia coli 9099...  517     0.0   
A0A0I1BIA8 DUF481 domain-containing protein [Shigella sonnei]         517     0.0   
A0A192C7W4 DUF481 domain-containing protein [Escherichia coli O25...  517     0.0   
B6DYD3 DUF481 domain-containing protein [Salmonella enterica subs...  475     2e-176


>A0A454A4K6 Salt-induced outer membrane protein [Escherichia coli 
O6:K15:H31 (strain 536 / UPEC)]
Length=252

 Score = 517 bits (1331),  Expect = 0.0
 Identities = 252/252 (100%), Positives = 252/252 (100%), Gaps = 0/252 (0%)

Query  1    MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKS  60
            MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKS
Sbjct  1    MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKS  60

Query  61   SSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASW  120
            SSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASW
Sbjct  61   SSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASW  120

Query  121  LTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAY  180
            LTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAY
Sbjct  121  LTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAY  180

Query  181  AWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT  240
            AWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT
Sbjct  181  AWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT  240

Query  241  DRRTTLSLGYSM  252
            DRRTTLSLGYSM
Sbjct  241  DRRTTLSLGYSM  252


>U9ZJS3 Salt-induced outer membrane protein [Escherichia coli 
909945-2]
Length=252

 Score = 517 bits (1331),  Expect = 0.0
 Identities = 252/252 (100%), Positives = 252/252 (100%), Gaps = 0/252 (0%)

Query  1    MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKS  60
            MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKS
Sbjct  1    MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKS  60

Query  61   SSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASW  120
            SSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASW
Sbjct  61   SSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASW  120

Query  121  LTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAY  180
            LTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAY
Sbjct  121  LTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAY  180

Query  181  AWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT  240
            AWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT
Sbjct  181  AWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT  240

Query  241  DRRTTLSLGYSM  252
            DRRTTLSLGYSM
Sbjct  241  DRRTTLSLGYSM  252


>A0A0I1BIA8 DUF481 domain-containing protein [Shigella sonnei]
Length=252

 Score = 517 bits (1331),  Expect = 0.0
 Identities = 252/252 (100%), Positives = 252/252 (100%), Gaps = 0/252 (0%)

Query  1    MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKS  60
            MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKS
Sbjct  1    MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKS  60

Query  61   SSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASW  120
            SSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASW
Sbjct  61   SSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASW  120

Query  121  LTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAY  180
            LTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAY
Sbjct  121  LTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAY  180

Query  181  AWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT  240
            AWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT
Sbjct  181  AWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT  240

Query  241  DRRTTLSLGYSM  252
            DRRTTLSLGYSM
Sbjct  241  DRRTTLSLGYSM  252


>A0A192C7W4 DUF481 domain-containing protein [Escherichia coli 
O25b:H4]
Length=252

 Score = 517 bits (1331),  Expect = 0.0
 Identities = 252/252 (100%), Positives = 252/252 (100%), Gaps = 0/252 (0%)

Query  1    MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKS  60
            MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKS
Sbjct  1    MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKS  60

Query  61   SSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASW  120
            SSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASW
Sbjct  61   SSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASW  120

Query  121  LTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAY  180
            LTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAY
Sbjct  121  LTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAY  180

Query  181  AWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT  240
            AWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT
Sbjct  181  AWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT  240

Query  241  DRRTTLSLGYSM  252
            DRRTTLSLGYSM
Sbjct  241  DRRTTLSLGYSM  252


>B6DYD3 DUF481 domain-containing protein [Salmonella enterica 
subsp. enterica serovar Choleraesuis]
Length=252

 Score = 475 bits (1222),  Expect = 2e-176
 Identities = 224/252 (89%), Positives = 242/252 (96%), Gaps = 0/252 (0%)

Query  1    MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKS  60
            MKLLK VPA+VMLAGG+FASL AAADDSVFTVMDDP++AKKPFEGNLNAGYLAQSGNTKS
Sbjct  1    MKLLKAVPAVVMLAGGVFASLYAAADDSVFTVMDDPSTAKKPFEGNLNAGYLAQSGNTKS  60

Query  61   SSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASW  120
            SSLTADT MTWYGQ TAWSLWGNASNTSSNDERSSEKYA G R+RFN+TDYDY FGQASW
Sbjct  61   SSLTADTAMTWYGQRTAWSLWGNASNTSSNDERSSEKYAVGARNRFNMTDYDYTFGQASW  120

Query  121  LTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAY  180
            LTDR+NGYR+RDVLTAGYGRQFLNGPVHSFRFEFGPGVRYD++TD+ +ETQPLGYASG+Y
Sbjct  121  LTDRFNGYRQRDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDEHTDDTTETQPLGYASGSY  180

Query  181  AWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT  240
            AWQLTDNAKFTQGVSVFGAEDTTLNSE+ALNVAINEHFGLKV YN+TWNS+PPESAPEHT
Sbjct  181  AWQLTDNAKFTQGVSVFGAEDTTLNSETALNVAINEHFGLKVGYNLTWNSQPPESAPEHT  240

Query  241  DRRTTLSLGYSM  252
            DRRTT++LGY M
Sbjct  241  DRRTTVTLGYKM  252



Lambda      K        H        a         alpha
   0.315    0.129    0.390    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 236530


  Database: 8b900edea10cf326d8ef9b6cdcfc79a3.TrEMBL.fasta
    Posted date:  Jun 1, 2024  9:46 AM
  Number of letters in database: 1,260
  Number of sequences in database:  5



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40