BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: f8a7edbb85a3f677cc215ad9b0f3c4a3.SwissProt.fasta
           2 sequences; 415 total letters



Query= Z6031

Length=227
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P03730 Tail tip assembly protein I [Escherichia phage lambda]         303     6e-110
O64334 Tail tip assembly protein I [Escherichia phage N15]            68.6    9e-19 


>P03730 Tail tip assembly protein I [Escherichia phage lambda]
Length=223

 Score = 303 bits (776),  Expect = 6e-110
 Identities = 153/225 (68%), Positives = 185/225 (82%), Gaps = 3/225 (1%)

Query  1    MATTNAFSLASPPLARICLHGDLQRFGRRLSLYVNTAAEAIRALSLQVPGFRRQMNEGWY  60
            MA T+   LASP +ARICL+GDLQRFGRR+ L V T AEAIRAL+ Q+P FR+++++GWY
Sbjct  1    MAATHTLPLASPGMARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLSDGWY  60

Query  61   QIRIAGYDTAPEAVYARLHEQLGEGTVIHIVPRLAGAGKGGL-QIVLGAAAIVGSFFTAG  119
            Q+RIAG D +   + A+LHE L +G VIHIVPR+AGA  GG+ QIVLGAAAI GSFFTAG
Sbjct  61   QVRIAGRDVSTSGLTAQLHETLPDGAVIHIVPRVAGAKSGGVFQIVLGAAAIAGSFFTAG  120

Query  120  ASMALWGSALAAGGFSATTMLFSLGASMILGGVAQMLAPKAKTPDYRATDNGRQNTYFSS  179
            A++A WG+A+ AGG   T +LFSLGASM+LGGVAQMLAPKA+TP  + TDNG+QNTYFSS
Sbjct  121  ATLAAWGAAIGAGGM--TGILFSLGASMVLGGVAQMLAPKARTPRIQTTDNGKQNTYFSS  178

Query  180  LDNMIAQGNPMPVPYGEMLVGSRRISQDISTRDEGGGGTVVVVGR  224
            LDNM+AQGN +PV YGEM VGSR +SQ+IST DEG GG VVV+GR
Sbjct  179  LDNMVAQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR  223


>O64334 Tail tip assembly protein I [Escherichia phage N15]
Length=192

 Score = 68.6 bits (166),  Expect = 9e-19
 Identities = 63/205 (31%), Positives = 96/205 (47%), Gaps = 19/205 (9%)

Query  14   LARICLHGDLQR-FGRRLSLYVNTAAEAIRALSLQVPGFRRQMNEGWYQIRIAGYDTAPE  72
            ++RI L G L + FG+     ++  +EA  AL+  VPGF + M     Q R   Y     
Sbjct  1    MSRIELGGVLGKTFGKVHHRLISRVSEAGVALAKTVPGFEQFMISS--QRRGLTYSVFKG  58

Query  73   AVYARLHEQLG---EGTVIHIVPRLAGAGKGG-LQIVLGAAAIVGSFFTAGASMALWGSA  128
                 + + LG    G VI IVP + G+ K G LQ +LGA  +         +   W +A
Sbjct  59   KKNIGV-DDLGFPVTGDVIRIVPVIIGSKKAGVLQTILGAVLVAVGVVL---NFTPWAAA  114

Query  129  LAAGGFSATTMLFSLGASMILGGVAQMLAPKAKTPDYRATDNGRQNTYFSSLDNMIAQGN  188
                    +   + LGA+++LGGV QML+P+      + + + R +  F  + N  AQG 
Sbjct  115  --------SPFFYKLGAAVMLGGVVQMLSPQPAGLASKQSSDNRASYAFGGVTNTAAQGY  166

Query  189  PMPVPYGEMLVGSRRISQDISTRDE  213
            P+P+ YG   +G   IS  I   D+
Sbjct  167  PVPLLYGRRRIGGAIISAGIYVEDQ  191



Lambda      K        H        a         alpha
   0.323    0.137    0.406    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 72963


  Database: f8a7edbb85a3f677cc215ad9b0f3c4a3.SwissProt.fasta
    Posted date:  May 31, 2024  1:31 PM
  Number of letters in database: 415
  Number of sequences in database:  2



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40