Comparative Genomics

Z2042 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: c4466bd72396dfd8c753b37c470672ab.TrEMBL.fasta
           16 sequences; 1,152 total letters



Query= Z2042

Length=73
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A0A4P8C375 Prophage protein [Escherichia coli O145:NM]                146     2e-52
A0A7R7D297 Prophage protein [Enterobacteria phage PPompW_EH1846]      146     2e-52
A0A0K9TDG1 Prophage protein [Escherichia coli M114]                   146     2e-52
A0A1S9IQF2 Prophage protein [Shigella boydii]                         143     4e-51
A0A0D7GSF9 Putative prophage protein [Escherichia coli]               143     4e-51
A0A656BL50 Prophage protein [Shigella sonnei]                         143     4e-51
Q8X454 Prophage protein [Escherichia coli O157:H7]                    141     2e-50
A0A0H0MYP8 Putative prophage protein [Escherichia coli]               141     2e-50
A0A0F3UXF3 Uncharacterized protein [Escherichia coli]                 141     3e-50
A0A0K9T4I8 Prophage protein [Escherichia coli M114]                   140     5e-50
A0A0D8WHI1 Prophage protein [Escherichia coli]                        140     7e-50
A0A854BM17 Prophage protein [Escherichia coli]                        140     1e-49
A0A827ERU1 Prophage protein [Escherichia coli]                        140     1e-49
A0A7U8ZDL7 Prophage protein [Escherichia albertii]                    139     1e-49
A0A828AMI9 Prophage protein [Escherichia coli]                        139     1e-49
A0A376PX85 Putative prophage protein [Escherichia coli]               139     1e-49


>A0A4P8C375 Prophage protein [Escherichia coli O145:NM]
Length=72

 Score = 146 bits (369),  Expect = 2e-52
 Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  1   MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAA  60
           MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAA
Sbjct  1   MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAA  60

Query  61  ALSIARMITYPR  72
           ALSIARMITYPR
Sbjct  61  ALSIARMITYPR  72


>A0A7R7D297 Prophage protein [Enterobacteria phage PPompW_EH1846]
Length=72

 Score = 146 bits (369),  Expect = 2e-52
 Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  1   MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAA  60
           MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAA
Sbjct  1   MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAA  60

Query  61  ALSIARMITYPR  72
           ALSIARMITYPR
Sbjct  61  ALSIARMITYPR  72


>A0A0K9TDG1 Prophage protein [Escherichia coli M114]
Length=72

 Score = 146 bits (369),  Expect = 2e-52
 Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  1   MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAA  60
           MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAA
Sbjct  1   MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAA  60

Query  61  ALSIARMITYPR  72
           ALSIARMITYPR
Sbjct  61  ALSIARMITYPR  72


>A0A1S9IQF2 Prophage protein [Shigella boydii]
Length=72

 Score = 143 bits (361),  Expect = 4e-51
 Identities = 70/72 (97%), Positives = 71/72 (99%), Gaps = 0/72 (0%)

Query  1   MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAA  60
           MQKR+PVIIAPDYTDDELYEWMHQKIKA QDLKWANEARAKQAENLSALEQDITNLEKAA
Sbjct  1   MQKREPVIIAPDYTDDELYEWMHQKIKAAQDLKWANEARAKQAENLSALEQDITNLEKAA  60

Query  61  ALSIARMITYPR  72
           ALSIARMITYPR
Sbjct  61  ALSIARMITYPR  72


>A0A0D7GSF9 Putative prophage protein [Escherichia coli]
Length=72

 Score = 143 bits (361),  Expect = 4e-51
 Identities = 70/72 (97%), Positives = 71/72 (99%), Gaps = 0/72 (0%)

Query  1   MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAA  60
           MQKR+PVIIAPDYTDDELYEWMHQKIKA QDLKWANEARAKQAENLSALEQDITNLEKAA
Sbjct  1   MQKREPVIIAPDYTDDELYEWMHQKIKAAQDLKWANEARAKQAENLSALEQDITNLEKAA  60

Query  61  ALSIARMITYPR  72
           ALSIARMITYPR
Sbjct  61  ALSIARMITYPR  72


>A0A656BL50 Prophage protein [Shigella sonnei]
Length=72

 Score = 143 bits (361),  Expect = 4e-51
 Identities = 70/72 (97%), Positives = 71/72 (99%), Gaps = 0/72 (0%)

Query  1   MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAA  60
           MQKR+PVIIAPDYTDDELYEWMHQKIKA QDLKWANEARAKQAENLSALEQDITNLEKAA
Sbjct  1   MQKREPVIIAPDYTDDELYEWMHQKIKAAQDLKWANEARAKQAENLSALEQDITNLEKAA  60

Query  61  ALSIARMITYPR  72
           ALSIARMITYPR
Sbjct  61  ALSIARMITYPR  72


>Q8X454 Prophage protein [Escherichia coli O157:H7]
Length=72

 Score = 141 bits (356),  Expect = 2e-50
 Identities = 69/72 (96%), Positives = 70/72 (97%), Gaps = 0/72 (0%)

Query  1   MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAA  60
           MQKR+PVIIAPDYTDDELYEWMHQKI A QDLKWANEARAKQAENLSALEQDITNLEKAA
Sbjct  1   MQKREPVIIAPDYTDDELYEWMHQKINAAQDLKWANEARAKQAENLSALEQDITNLEKAA  60

Query  61  ALSIARMITYPR  72
           ALSIARMITYPR
Sbjct  61  ALSIARMITYPR  72


>A0A0H0MYP8 Putative prophage protein [Escherichia coli]
Length=72

 Score = 141 bits (356),  Expect = 2e-50
 Identities = 69/72 (96%), Positives = 70/72 (97%), Gaps = 0/72 (0%)

Query  1   MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAA  60
           MQKR+PVIIAPDYTDDELYEWMHQKI A QDLKWANEARAKQAENLSALEQDITNLEKAA
Sbjct  1   MQKREPVIIAPDYTDDELYEWMHQKINAAQDLKWANEARAKQAENLSALEQDITNLEKAA  60

Query  61  ALSIARMITYPR  72
           ALSIARMITYPR
Sbjct  61  ALSIARMITYPR  72


>A0A0F3UXF3 Uncharacterized protein [Escherichia coli]
Length=72

 Score = 141 bits (355),  Expect = 3e-50
 Identities = 69/72 (96%), Positives = 70/72 (97%), Gaps = 0/72 (0%)

Query  1   MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAA  60
           MQKR+PVIIAPDYTDDELYEWMHQKIKA QDLKWANEARAKQAENLSALEQDIT LEKAA
Sbjct  1   MQKREPVIIAPDYTDDELYEWMHQKIKAAQDLKWANEARAKQAENLSALEQDITRLEKAA  60

Query  61  ALSIARMITYPR  72
           ALSIARMITYPR
Sbjct  61  ALSIARMITYPR  72


>A0A0K9T4I8 Prophage protein [Escherichia coli M114]
Length=72

 Score = 140 bits (354),  Expect = 5e-50
 Identities = 69/72 (96%), Positives = 70/72 (97%), Gaps = 0/72 (0%)

Query  1   MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAA  60
           MQKR+PVIIAPDYTDDELYEWMHQKIKA QDLKWANEARAKQAENLSALEQ ITNLEKAA
Sbjct  1   MQKREPVIIAPDYTDDELYEWMHQKIKAAQDLKWANEARAKQAENLSALEQGITNLEKAA  60

Query  61  ALSIARMITYPR  72
           ALSIARMITYPR
Sbjct  61  ALSIARMITYPR  72


>A0A0D8WHI1 Prophage protein [Escherichia coli]
Length=72

 Score = 140 bits (353),  Expect = 7e-50
 Identities = 69/72 (96%), Positives = 70/72 (97%), Gaps = 0/72 (0%)

Query  1   MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAA  60
           MQKR+PVIIAPDYTDDELYEWM QKIKA QDLKWANEARAKQAENLSALEQDITNLEKAA
Sbjct  1   MQKREPVIIAPDYTDDELYEWMRQKIKAAQDLKWANEARAKQAENLSALEQDITNLEKAA  60

Query  61  ALSIARMITYPR  72
           ALSIARMITYPR
Sbjct  61  ALSIARMITYPR  72


>A0A854BM17 Prophage protein [Escherichia coli]
Length=72

 Score = 140 bits (352),  Expect = 1e-49
 Identities = 68/72 (94%), Positives = 69/72 (96%), Gaps = 0/72 (0%)

Query  1   MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAA  60
           MQKR+PVIIAPDYTDDELYEWMHQKI A QDLKWANEAR KQAENLSALEQDITNLEKAA
Sbjct  1   MQKREPVIIAPDYTDDELYEWMHQKINAAQDLKWANEARTKQAENLSALEQDITNLEKAA  60

Query  61  ALSIARMITYPR  72
           ALSIARMITYPR
Sbjct  61  ALSIARMITYPR  72


>A0A827ERU1 Prophage protein [Escherichia coli]
Length=72

 Score = 140 bits (352),  Expect = 1e-49
 Identities = 68/72 (94%), Positives = 70/72 (97%), Gaps = 0/72 (0%)

Query  1   MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAA  60
           MQKR+PVIIAPDYTDDELYEWMHQKI A Q+LKWANEARAKQAENLSALEQDITNLEKAA
Sbjct  1   MQKREPVIIAPDYTDDELYEWMHQKINAAQELKWANEARAKQAENLSALEQDITNLEKAA  60

Query  61  ALSIARMITYPR  72
           ALSIARMITYPR
Sbjct  61  ALSIARMITYPR  72


>A0A7U8ZDL7 Prophage protein [Escherichia albertii]
Length=72

 Score = 139 bits (351),  Expect = 1e-49
 Identities = 68/72 (94%), Positives = 70/72 (97%), Gaps = 0/72 (0%)

Query  1   MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAA  60
           MQKR+PVIIAPDYTDDELYEWMHQKIKA QDLKWANEA AKQAENLSALE+DITNLEKAA
Sbjct  1   MQKREPVIIAPDYTDDELYEWMHQKIKAAQDLKWANEAMAKQAENLSALEKDITNLEKAA  60

Query  61  ALSIARMITYPR  72
           ALSIARMITYPR
Sbjct  61  ALSIARMITYPR  72


>A0A828AMI9 Prophage protein [Escherichia coli]
Length=72

 Score = 139 bits (351),  Expect = 1e-49
 Identities = 68/72 (94%), Positives = 70/72 (97%), Gaps = 0/72 (0%)

Query  1   MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAA  60
           MQKR+PVIIAPDYTDDELYEWMHQKIKA QDLKWANEA AKQAENLSALE+DITNLEKAA
Sbjct  1   MQKREPVIIAPDYTDDELYEWMHQKIKAAQDLKWANEAMAKQAENLSALEKDITNLEKAA  60

Query  61  ALSIARMITYPR  72
           ALSIARMITYPR
Sbjct  61  ALSIARMITYPR  72


>A0A376PX85 Putative prophage protein [Escherichia coli]
Length=72

 Score = 139 bits (351),  Expect = 1e-49
 Identities = 68/72 (94%), Positives = 70/72 (97%), Gaps = 0/72 (0%)

Query  1   MQKRDPVIIAPDYTDDELYEWMHQKIKAVQDLKWANEARAKQAENLSALEQDITNLEKAA  60
           MQKR+PVIIAPDYTDDELYEW+HQKIKA QDLKWANEARAKQAENLSALEQDIT LEKAA
Sbjct  1   MQKREPVIIAPDYTDDELYEWIHQKIKAAQDLKWANEARAKQAENLSALEQDITRLEKAA  60

Query  61  ALSIARMITYPR  72
           ALSIARMITYPR
Sbjct  61  ALSIARMITYPR  72



Lambda      K        H        a         alpha
   0.323    0.133    0.393    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 40800


  Database: c4466bd72396dfd8c753b37c470672ab.TrEMBL.fasta
    Posted date:  Jun 1, 2024  6:26 PM
  Number of letters in database: 1,152
  Number of sequences in database:  16



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40