BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: b0bc0afc92553e08223107df8d016e17.TrEMBL.fasta
           4 sequences; 517 total letters



Query= Z1672

Length=130
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A0A828UBS5 Curli production assembly/transport component CsgE [Es...  264     1e-97
A0A1X3J3H6 Curli production assembly/transport component CsgE [Es...  264     1e-97
B2CY46 Curli production assembly/transport component CsgE [Escher...  264     1e-97
Q8KSG2 Curli production assembly/transport component CsgE [Pseudo...  76.3    3e-23


>A0A828UBS5 Curli production assembly/transport component CsgE 
[Escherichia coli DEC2D]
Length=129

 Score = 264 bits (675),  Expect = 1e-97
 Identities = 129/129 (100%), Positives = 129/129 (100%), Gaps = 0/129 (0%)

Query  1    MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGNLT  60
            MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGNLT
Sbjct  1    MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGNLT  60

Query  61   INERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLS  120
            INERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLS
Sbjct  61   INERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLS  120

Query  121  TGDLAHDEF  129
            TGDLAHDEF
Sbjct  121  TGDLAHDEF  129


>A0A1X3J3H6 Curli production assembly/transport component CsgE 
[Escherichia coli TA447]
Length=129

 Score = 264 bits (675),  Expect = 1e-97
 Identities = 129/129 (100%), Positives = 129/129 (100%), Gaps = 0/129 (0%)

Query  1    MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGNLT  60
            MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGNLT
Sbjct  1    MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGNLT  60

Query  61   INERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLS  120
            INERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLS
Sbjct  61   INERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLS  120

Query  121  TGDLAHDEF  129
            TGDLAHDEF
Sbjct  121  TGDLAHDEF  129


>B2CY46 Curli production assembly/transport component CsgE [Escherichia 
coli]
Length=129

 Score = 264 bits (675),  Expect = 1e-97
 Identities = 129/129 (100%), Positives = 129/129 (100%), Gaps = 0/129 (0%)

Query  1    MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGNLT  60
            MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGNLT
Sbjct  1    MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGNLT  60

Query  61   INERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLS  120
            INERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLS
Sbjct  61   INERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLS  120

Query  121  TGDLAHDEF  129
            TGDLAHDEF
Sbjct  121  TGDLAHDEF  129


>Q8KSG2 Curli production assembly/transport component CsgE [Pseudomonas 
putida (strain GB-1)]
Length=130

 Score = 76.3 bits (186),  Expect = 3e-23
 Identities = 42/114 (37%), Positives = 65/114 (57%), Gaps = 6/114 (5%)

Query  17   AGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWE--SDYTGNLTINERPSARWGSWIT  74
            AGN    E E+ G + D+T+S IGHDFY  F+D+    S    NL + ERP ARWGS +T
Sbjct  20   AGN----EDEMQGFIVDNTISHIGHDFYYYFADRLRATSRLDFNLVVRERPDARWGSLVT  75

Query  75   ITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDE  128
            +   ++V+++ FL P   + +   V A    ++ + +R++ + L  T DL  DE
Sbjct  76   VEFEREVMYRRFLPPNTTELKDEAVAAADLVKQQIIQRKLQRLLQDTTDLERDE  129



Lambda      K        H        a         alpha
   0.327    0.139    0.434    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 45475


  Database: b0bc0afc92553e08223107df8d016e17.TrEMBL.fasta
    Posted date:  May 20, 2024  1:02 PM
  Number of letters in database: 517
  Number of sequences in database:  4



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40