BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: c79da2aae135e8a08dd28d13cd547116.SwissProt.fasta
           2 sequences; 313 total letters



Query= Z0951

Length=227
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P03697 Exonuclease [Escherichia phage lambda]                         464     1e-173
P75717 Putative uncharacterized protein ExoD [Escherichia coli (s...  180     2e-63 


>P03697 Exonuclease [Escherichia phage lambda]
Length=226

 Score = 464 bits (1193),  Expect = 1e-173
 Identities = 222/226 (98%), Positives = 225/226 (99%), Gaps = 0/226 (0%)

Query  1    MTPDIILQRTGIDVRAVEQGDDAWHKLRLGVITASEVHNVIAKPRSGKKWPDMKMSYFHT  60
            MTPDIILQRTGIDVRAVEQGDDAWHKLRLGVITASEVHNVIAKPRSGKKWPDMKMSYFHT
Sbjct  1    MTPDIILQRTGIDVRAVEQGDDAWHKLRLGVITASEVHNVIAKPRSGKKWPDMKMSYFHT  60

Query  61   LLAEVCTGVAPEVNAKALAWGKQYENDARTLFEFTSGVNVTESPIIYRDESMRTACSPDG  120
            LLAEVCTGVAPEVNAKALAWGKQYENDARTLFEFTSGVNVTESPIIYRDESMRTACSPDG
Sbjct  61   LLAEVCTGVAPEVNAKALAWGKQYENDARTLFEFTSGVNVTESPIIYRDESMRTACSPDG  120

Query  121  LCSDGNGLELKCPFTSRDFMKFRLGGFEAIKSAYMAQVQYSMWVTRKDAWYFANYDPRMK  180
            LCSDGNGLELKCPFTSRDFMKFRLGGFEAIKSAYMAQVQYSMWVTRK+AWYFANYDPRMK
Sbjct  121  LCSDGNGLELKCPFTSRDFMKFRLGGFEAIKSAYMAQVQYSMWVTRKNAWYFANYDPRMK  180

Query  181  REGLHYVVVERDEKYMAGFDEMVPEFIEKMDEALAEIGFVFGEQWR  226
            REGLHYVV+ERDEKYMA FDE+VPEFIEKMDEALAEIGFVFGEQWR
Sbjct  181  REGLHYVVIERDEKYMASFDEIVPEFIEKMDEALAEIGFVFGEQWR  226


>P75717 Putative uncharacterized protein ExoD [Escherichia coli 
(strain K12)]
Length=87

 Score = 180 bits (456),  Expect = 2e-63
 Identities = 84/87 (97%), Positives = 86/87 (99%), Gaps = 0/87 (0%)

Query  140  MKFRLGGFEAIKSAYMAQVQYSMWVTRKDAWYFANYDPRMKREGLHYVVVERDEKYMAGF  199
            MKFRLGGFEAIKSAYMAQVQYSMWVTRKDAWYFANYDPRMKREGLHYVV+ER+EKYMA F
Sbjct  1    MKFRLGGFEAIKSAYMAQVQYSMWVTRKDAWYFANYDPRMKREGLHYVVIERNEKYMASF  60

Query  200  DEMVPEFIEKMDEALAEIGFVFGEQWR  226
            DEMVPEFIEKMDEALAEIGFVFGEQWR
Sbjct  61   DEMVPEFIEKMDEALAEIGFVFGEQWR  87



Lambda      K        H        a         alpha
   0.323    0.137    0.433    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 53795


  Database: c79da2aae135e8a08dd28d13cd547116.SwissProt.fasta
    Posted date:  May 20, 2024  11:44 AM
  Number of letters in database: 313
  Number of sequences in database:  2



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40