BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: bde0835e50390501c72b973e43daae5e.SwissProt.fasta
           1 sequences; 296 total letters



Query= Z0697

Length=297
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P37325 Uncharacterized protein YbcH [Escherichia coli (strain K12)]   584     0.0  


>P37325 Uncharacterized protein YbcH [Escherichia coli (strain 
K12)]
Length=296

 Score = 584 bits (1506),  Expect = 0.0
 Identities = 290/296 (98%), Positives = 292/296 (99%), Gaps = 0/296 (0%)

Query  1    MRKFIFVLLTLLLVSPFSFAMKGIIWQPQNRDSQVTDTQWQGLMSQLRLQGFDTLVLQWT  60
            MRKFIFVLLTLLLVSPFSFAMKGIIWQPQNRDSQVTDTQWQGLMSQLRLQGFDTLVLQWT
Sbjct  1    MRKFIFVLLTLLLVSPFSFAMKGIIWQPQNRDSQVTDTQWQGLMSQLRLQGFDTLVLQWT  60

Query  61   RYGDAFTQPEQRALLFKRAAAAQQAGLKLIVGLNADPEFFMHQKQSSAALESYLNRLLAA  120
            RYGDAFTQPEQR LLFKRAAAAQQAGLKLIVGLNADPEFFMHQKQSSAALESYLNRLLAA
Sbjct  61   RYGDAFTQPEQRTLLFKRAAAAQQAGLKLIVGLNADPEFFMHQKQSSAALESYLNRLLAA  120

Query  121  DLQQARLWSAVPGVTPDGWYFSAEIDDLNWRSEAARQPLLTWLNNAQRLISDVSAKPVYI  180
            DLQQARLWSA PG+TPDGWY SAEIDDLNWRSEAARQPLLTWLNNAQRLISDVSAKPVYI
Sbjct  121  DLQQARLWSAAPGITPDGWYISAEIDDLNWRSEAARQPLLTWLNNAQRLISDVSAKPVYI  180

Query  181  SSFFAGNMSPDGYRQLLEHVKATGVNVWVQDGSGVDKLTAEQRERYLQASADCQSSAPAS  240
            SSFFAGNMSPDGYRQLLEHVKATGVNVWVQDGSGVDKLTAEQRERYLQASADCQS APAS
Sbjct  181  SSFFAGNMSPDGYRQLLEHVKATGVNVWVQDGSGVDKLTAEQRERYLQASADCQSPAPAS  240

Query  241  GIVYELFVAGKGKTFTAKPKPDAEIASLLAKRSSCGKDTLYFSLRYLPVAHGILEY  296
            G+VYELFVAGKGKTFTAKPKPDAEIASLLAKRSSCGKDTLYFSLRYLPVAHGILEY
Sbjct  241  GVVYELFVAGKGKTFTAKPKPDAEIASLLAKRSSCGKDTLYFSLRYLPVAHGILEY  296



Lambda      K        H        a         alpha
   0.322    0.134    0.408    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 73170


  Database: bde0835e50390501c72b973e43daae5e.SwissProt.fasta
    Posted date:  May 31, 2024  7:53 PM
  Number of letters in database: 296
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40