BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: c4fcba97e1b1742c1f8c9b86ab8e5598.SwissProt.fasta
5 sequences; 7,106 total letters
Query= Z0208
Length=135
Score E
Sequences producing significant alignments: (Bits) Value
P69412 Outer membrane lipoprotein RcsF [Escherichia coli O6:H1 (s... 269 4e-98
P69411 Outer membrane lipoprotein RcsF [Escherichia coli (strain ... 269 4e-98
P55200 Histone-lysine N-methyltransferase 2A [Mus musculus] 35.4 4e-06
P08314 Tegument protein UL46 [Human herpesvirus 1 (strain F)] 33.5 2e-05
Q03149 Conidial yellow pigment biosynthesis polyketide synthase [... 33.5 2e-05
>P69412 Outer membrane lipoprotein RcsF [Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC)]
Length=134
Score = 269 bits (687), Expect = 4e-98
Identities = 133/134 (99%), Positives = 134/134 (100%), Gaps = 0/134 (0%)
Query 1 MRALPICLVALMLSGCSMLSRSPVEPVQSTAPQPKAEPAKPKAPRATPVRIYTNAEELVG 60
MRALPICLVALMLSGCSMLSRSPVEPVQSTAPQPKAEPAKPKAPRATPVRIYTNAEELVG
Sbjct 1 MRALPICLVALMLSGCSMLSRSPVEPVQSTAPQPKAEPAKPKAPRATPVRIYTNAEELVG 60
Query 61 KPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKANAVLLHSCEVTSGTPGCYR 120
KPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKANAVLLHSCEVTSGTPGCYR
Sbjct 61 KPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKANAVLLHSCEVTSGTPGCYR 120
Query 121 QALCIGSALNITAK 134
QA+CIGSALNITAK
Sbjct 121 QAVCIGSALNITAK 134
>P69411 Outer membrane lipoprotein RcsF [Escherichia coli (strain
K12)]
Length=134
Score = 269 bits (687), Expect = 4e-98
Identities = 133/134 (99%), Positives = 134/134 (100%), Gaps = 0/134 (0%)
Query 1 MRALPICLVALMLSGCSMLSRSPVEPVQSTAPQPKAEPAKPKAPRATPVRIYTNAEELVG 60
MRALPICLVALMLSGCSMLSRSPVEPVQSTAPQPKAEPAKPKAPRATPVRIYTNAEELVG
Sbjct 1 MRALPICLVALMLSGCSMLSRSPVEPVQSTAPQPKAEPAKPKAPRATPVRIYTNAEELVG 60
Query 61 KPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKANAVLLHSCEVTSGTPGCYR 120
KPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKANAVLLHSCEVTSGTPGCYR
Sbjct 61 KPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKANAVLLHSCEVTSGTPGCYR 120
Query 121 QALCIGSALNITAK 134
QA+CIGSALNITAK
Sbjct 121 QAVCIGSALNITAK 134
>P55200 Histone-lysine N-methyltransferase 2A [Mus musculus]
Length=3966
Score = 35.4 bits (80), Expect = 4e-06
Identities = 23/71 (32%), Positives = 31/71 (44%), Gaps = 11/71 (15%)
Query 21 RSPVEPVQSTAPQPKAEPAKPKAPRATPVRIYTNAEELVGKPFRDLGEVSGDSCQA-SNQ 79
+SP+EP Q AP P+ EPA K+ P R KP + E G A + +
Sbjct 1232 KSPLEPAQKAAPPPREEPAPKKSSSEPPPR----------KPVEEKSEEGGAPAPAPAPE 1281
Query 80 DSPPSIPTARK 90
S P +RK
Sbjct 1282 PKQVSAPASRK 1292
Score = 23.9 bits (50), Expect = 0.031
Identities = 14/30 (47%), Positives = 18/30 (60%), Gaps = 5/30 (17%)
Query 23 PVEPVQSTAPQ----PKAEPAKPKAPRATP 48
P +P STAPQ PKA P++PK + P
Sbjct 1305 PPQP-PSTAPQKKEAPKAVPSEPKKKQPPP 1333
Score = 23.1 bits (48), Expect = 0.055
Identities = 11/30 (37%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query 20 SRSPVEPVQSTAPQPKAE-PAKPKAPRATP 48
S+ +P PQP + P K +AP+A P
Sbjct 1294 SKQVSQPAAVVPPQPPSTAPQKKEAPKAVP 1323
Score = 19.2 bits (38), Expect = 1.0
Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 7/25 (28%)
Query 33 QPKAEPAKP-------KAPRATPVR 50
+P A P KP KAP+ PV+
Sbjct 1120 EPLAPPIKPIKPVTRNKAPQEPPVK 1144
Score = 19.2 bits (38), Expect = 1.0
Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 14/75 (19%)
Query 20 SRSPVEPVQSTAPQPKAEPAKPKAPRATPVRIYTNAEELVGKPFRDLGEVSGDSCQASNQ 79
S SP + P P A +P T I T + L+ R +G S +
Sbjct 2150 SYSPTQRSPGCRPLPSA-----GSPTPTTHEIVTVGDPLLSSGLRSIG---------SRR 2195
Query 80 DSPPSIPTARKRMQI 94
S S+ R +++I
Sbjct 2196 HSTSSLSPLRSKLRI 2210
Score = 18.5 bits (36), Expect = 1.8
Identities = 8/17 (47%), Positives = 11/17 (65%), Gaps = 1/17 (6%)
Query 31 APQPKAEPAKPKA-PRA 46
+P KA P KP+ PR+
Sbjct 163 SPSVKASPRKPRGRPRS 179
Score = 18.5 bits (36), Expect = 1.8
Identities = 6/15 (40%), Positives = 10/15 (67%), Gaps = 0/15 (0%)
Query 34 PKAEPAKPKAPRATP 48
P A+PA +P ++P
Sbjct 3501 PSAKPASSASPGSSP 3515
Score = 18.1 bits (35), Expect = 2.4
Identities = 7/19 (37%), Positives = 12/19 (63%), Gaps = 0/19 (0%)
Query 82 PPSIPTARKRMQINASKMK 100
PP+IP A + +A+ M+
Sbjct 585 PPTIPLASPFLPASAAPMQ 603
Score = 18.1 bits (35), Expect = 2.4
Identities = 7/18 (39%), Positives = 11/18 (61%), Gaps = 0/18 (0%)
Query 36 AEPAKPKAPRATPVRIYT 53
+E A+P AP P++ T
Sbjct 1116 SEDAEPLAPPIKPIKPVT 1133
Score = 18.1 bits (35), Expect = 2.4
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 5/33 (15%)
Query 23 PVEPVQSTAPQPKAEPA----KPKAPR-ATPVR 50
P EP + P P+ P K APR + PV+
Sbjct 1323 PSEPKKKQPPPPEPGPEQSKQKKVAPRPSIPVK 1355
Score = 17.7 bits (34), Expect = 3.2
Identities = 12/44 (27%), Positives = 17/44 (39%), Gaps = 6/44 (14%)
Query 22 SPVEPVQ------STAPQPKAEPAKPKAPRATPVRIYTNAEELV 59
SP PVQ S+ P A + TP + E+L+
Sbjct 3032 SPTVPVQNQKYVPSSTDSPGPSQISNAAVQTTPPHLKPATEKLI 3075
Score = 17.3 bits (33), Expect = 4.3
Identities = 8/21 (38%), Positives = 12/21 (57%), Gaps = 2/21 (10%)
Query 26 PVQSTAPQPKAEPAKPKAPRA 46
P + T P P +P+ + PRA
Sbjct 3565 PHRDTDPAP--QPSVTRTPRA 3583
Score = 16.9 bits (32), Expect = 5.7
Identities = 8/22 (36%), Positives = 11/22 (50%), Gaps = 1/22 (5%)
Query 27 VQSTAPQPKAEPAKPKAPRATP 48
V+S P + A P+ PR P
Sbjct 157 VRSPTRSPSVK-ASPRKPRGRP 177
Score = 16.9 bits (32), Expect = 5.7
Identities = 10/37 (27%), Positives = 18/37 (49%), Gaps = 4/37 (11%)
Query 64 RDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMK 100
+D+ E++ Q S +DS + M A+K+K
Sbjct 237 KDIAELT----QGSKEDSLKKVKRTPSAMFQQATKIK 269
>P08314 Tegument protein UL46 [Human herpesvirus 1 (strain F)]
Length=715
Score = 33.5 bits (75), Expect = 2e-05
Identities = 15/42 (36%), Positives = 22/42 (52%), Gaps = 0/42 (0%)
Query 21 RSPVEPVQSTAPQPKAEPAKPKAPRATPVRIYTNAEELVGKP 62
R+P P S P+ PA P+APR P +A++ V +P
Sbjct 466 RAPAPPPTSPTLDPRGHPAVPEAPRGRPAPPLPDADDPVAEP 507
>Q03149 Conidial yellow pigment biosynthesis polyketide synthase
[Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46
/ NRRL 194 / M139)]
Length=2157
Score = 33.5 bits (75), Expect = 2e-05
Identities = 16/42 (38%), Positives = 25/42 (60%), Gaps = 0/42 (0%)
Query 19 LSRSPVEPVQSTAPQPKAEPAKPKAPRATPVRIYTNAEELVG 60
LS++ P+QS+APQ E AKP + A PV + + ++ G
Sbjct 1606 LSKAQTSPIQSSAPQKPIETAKPTSRPAPPVTMKSFVKKSAG 1647
Score = 18.1 bits (35), Expect = 2.4
Identities = 12/48 (25%), Positives = 22/48 (46%), Gaps = 4/48 (8%)
Query 70 SGDSCQASNQDSPPSI--PTARKRMQI--NASKMKANAVLLHSCEVTS 113
+GDSC + + P P K +QI N + + A++ V++
Sbjct 1741 NGDSCSGLSSPASPGTVSPPNEKVIQIHENGTMKEIRAIIADEIGVSA 1788
Score = 17.7 bits (34), Expect = 3.2
Identities = 8/23 (35%), Positives = 9/23 (39%), Gaps = 0/23 (0%)
Query 42 KAPRATPVRIYTNAEELVGKPFR 64
K A P YT + PFR
Sbjct 855 KDSNALPSLAYTTTARRIHHPFR 877
Lambda K H a alpha
0.319 0.131 0.391 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 641328
Database: c4fcba97e1b1742c1f8c9b86ab8e5598.SwissProt.fasta
Posted date: May 31, 2024 8:36 AM
Number of letters in database: 7,106
Number of sequences in database: 5
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
