BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 685ae32a09cb02bbc430eecdc89c1da4.SwissProt.fasta
14 sequences; 3,279 total letters
Query= Z6001
Length=230
Score E
Sequences producing significant alignments: (Bits) Value
P08368 Transcriptional regulatory protein CreB [Escherichia coli ... 451 3e-167
P69229 Transcriptional regulatory protein BaeR [Escherichia coli ... 170 2e-56
P69228 Transcriptional regulatory protein BaeR [Escherichia coli ... 170 2e-56
Q52990 Phosphate regulon transcriptional regulatory protein PhoB ... 160 9e-53
P50351 Transcriptional regulatory protein ChvI [Sinorhizobium fre... 154 4e-50
P50350 Transcriptional regulatory protein ChvI [Rhizobium melilot... 154 5e-50
P39663 Alkaline phosphatase synthesis transcriptional regulatory ... 154 5e-50
Q9F868 Sensory transduction protein RegX3 [Mycolicibacterium smeg... 151 3e-49
P9WGL8 Sensory transduction protein RegX3 [Mycobacterium tubercul... 149 2e-48
P9WGL9 Sensory transduction protein RegX3 [Mycobacterium tubercul... 149 2e-48
O07130 Sensory transduction protein RegX3 [Mycobacterium bovis (s... 149 2e-48
A0QTK2 DNA-binding response regulator MtrA [Mycolicibacterium sme... 147 9e-48
P13792 Alkaline phosphatase synthesis transcriptional regulatory ... 147 2e-47
P9WGM7 DNA-binding response regulator MtrA [Mycobacterium tubercu... 145 7e-47
>P08368 Transcriptional regulatory protein CreB [Escherichia coli
(strain K12)]
Length=229
Score = 451 bits (1159), Expect = 3e-167
Identities = 225/229 (98%), Positives = 226/229 (99%), Gaps = 0/229 (0%)
Query 1 MQRETVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARQQVPDVMILDVGLPDI 60
MQRETVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKAR+QVPDVMILDVGLPDI
Sbjct 1 MQRETVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARKQVPDVMILDVGLPDI 60
Query 61 SGFELCRQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVRTLLR 120
SGFELCRQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVRTLLR
Sbjct 61 SGFELCRQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVRTLLR 120
Query 121 RVKKFSTPSPVIRIGHFELNEPAAQISWFDTPLTLTRYEFLLLKTLLKSPGRVWSRQQLM 180
RVKKFSTPSPVIRIGHFELNEPAAQISWFDTPL LTRYEFLLLKTLLKSPGRVWSRQQLM
Sbjct 121 RVKKFSTPSPVIRIGHFELNEPAAQISWFDTPLALTRYEFLLLKTLLKSPGRVWSRQQLM 180
Query 181 DIVWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGMGYSLRSL 229
D VWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGMGYSLR L
Sbjct 181 DSVWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGMGYSLRGL 229
>P69229 Transcriptional regulatory protein BaeR [Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=240
Score = 170 bits (431), Expect = 2e-56
Identities = 96/225 (43%), Positives = 139/225 (62%), Gaps = 13/225 (6%)
Query 6 VWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARQQVPDVMILDVGLPDISGFEL 65
+ +VEDE + L+ L+ +A + G VL RQ PD+++LD+ LP G L
Sbjct 13 ILIVEDEPKLGQLLIDYLRAASYAPTLISHGDQVLPYVRQTPPDLILLDLMLPGTDGLTL 72
Query 66 CRQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVRTLLRRVK-- 123
CR++ +P++ +TA+ EE+DRLLGLEIGADDY+ KP+SPREV ARV+T+LRR K
Sbjct 73 CREIRRFSD-IPIVMVTAKIEEIDRLLGLEIGADDYICKPYSPREVVARVKTILRRCKPQ 131
Query 124 ----KFSTPSPVIRIGHFELNEPAAQISWFDTPLTLTRYEFLLLKTLLKSPGRVWSRQQL 179
+ SP+I ++E Q SW L LT EF LLKTL PG+V+SR+QL
Sbjct 132 RELQQQDAESPLI------IDEGRFQASWRGKMLDLTPAEFRLLKTLSHEPGKVFSREQL 185
Query 180 MDIVWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGMGY 224
++ +++D + DRT+D+HIK LR KL +++ + S I G+GY
Sbjct 186 LNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAEQSFIRAVYGVGY 230
>P69228 Transcriptional regulatory protein BaeR [Escherichia coli
(strain K12)]
Length=240
Score = 170 bits (431), Expect = 2e-56
Identities = 96/225 (43%), Positives = 139/225 (62%), Gaps = 13/225 (6%)
Query 6 VWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARQQVPDVMILDVGLPDISGFEL 65
+ +VEDE + L+ L+ +A + G VL RQ PD+++LD+ LP G L
Sbjct 13 ILIVEDEPKLGQLLIDYLRAASYAPTLISHGDQVLPYVRQTPPDLILLDLMLPGTDGLTL 72
Query 66 CRQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVRTLLRRVK-- 123
CR++ +P++ +TA+ EE+DRLLGLEIGADDY+ KP+SPREV ARV+T+LRR K
Sbjct 73 CREIRRFSD-IPIVMVTAKIEEIDRLLGLEIGADDYICKPYSPREVVARVKTILRRCKPQ 131
Query 124 ----KFSTPSPVIRIGHFELNEPAAQISWFDTPLTLTRYEFLLLKTLLKSPGRVWSRQQL 179
+ SP+I ++E Q SW L LT EF LLKTL PG+V+SR+QL
Sbjct 132 RELQQQDAESPLI------IDEGRFQASWRGKMLDLTPAEFRLLKTLSHEPGKVFSREQL 185
Query 180 MDIVWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGMGY 224
++ +++D + DRT+D+HIK LR KL +++ + S I G+GY
Sbjct 186 LNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAEQSFIRAVYGVGY 230
>Q52990 Phosphate regulon transcriptional regulatory protein PhoB
[Rhizobium meliloti (strain 1021)]
Length=227
Score = 160 bits (405), Expect = 9e-53
Identities = 99/224 (44%), Positives = 134/224 (60%), Gaps = 6/224 (3%)
Query 8 LVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARQQVPDVMILDVGLPDISGFELCR 67
+VEDE+ ++ L Y L+ EGF V+ RG + ++++PD++ILD LP +SG ELCR
Sbjct 7 VVEDEEALSVLLRYNLEAEGFEVDTILRGDEAEIRLQERLPDLLILDWMLPGVSGIELCR 66
Query 68 QLLALHPA--LPVLFLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVRTLLRRVKKF 125
+L LP++ LTAR EE +R+ GL GADDYV KPFS E+ ARV+ +LRR K
Sbjct 67 RLRQRPETERLPIIMLTARGEESERVRGLATGADDYVVKPFSTPELMARVKAMLRRAKP- 125
Query 126 STPSPVIRIGHFELNEPAAQISWFDTPLTLTRYEFLLLKTLLKSPGRVWSRQQLMDIVWE 185
S ++R G EL+ ++ + L EF LL+ L+ SPGRV+SR QL+D VW
Sbjct 126 EVLSTLLRCGDIELDRETHRVHRRSREVRLGPTEFRLLEFLMSSPGRVFSRSQLLDGVWG 185
Query 186 DAQDTYDRTVDTHIKTLRAKLRAIN-PDLSPINTHRGMGYSLRS 228
+RTVD H+ LR L N PD+ I T RG GYSL S
Sbjct 186 HDIYVDERTVDVHVGRLRKALNFSNMPDV--IRTVRGAGYSLES 227
>P50351 Transcriptional regulatory protein ChvI [Sinorhizobium
fredii (strain NBRC 101917 / NGR234)]
Length=241
Score = 154 bits (389), Expect = 4e-50
Identities = 86/238 (36%), Positives = 132/238 (55%), Gaps = 15/238 (6%)
Query 4 ETVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARQQVPDVMILDVGLPDISGF 63
+T+ LV+D++ I ++ L+ EG+ VE + G L+ + P + I D+ +P + G
Sbjct 2 QTIALVDDDRNILTSVSIALEAEGYKVETYTDGASALEGLLARPPHLAIFDIKMPRMDGM 61
Query 64 ELCRQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVRTLLRRV- 122
EL R+L LPV+FLT++ EE+D L GL++GADD++ KPFS R + RV+ +LRR
Sbjct 62 ELLRRLRQKSD-LPVIFLTSKDEEIDELFGLKMGADDFITKPFSQRLLVERVKAILRRAP 120
Query 123 -------------KKFSTPSPVIRIGHFELNEPAAQISWFDTPLTLTRYEFLLLKTLLKS 169
K PS + G +++ +W P+TLT EFL+L +L +
Sbjct 121 ARDAAAAGVAGAAKSADAPSRSLERGQLVMDQERHTCTWKSEPVTLTVTEFLILHSLAQR 180
Query 170 PGRVWSRQQLMDIVWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGMGYSLR 227
PG V SR LMD +++ DRT+D+HIK LR K + ++ D I T G+GY R
Sbjct 181 PGVVKSRDALMDAAYDEQVYVDDRTIDSHIKRLRKKFKMVDVDFDMIETLYGVGYRFR 238
>P50350 Transcriptional regulatory protein ChvI [Rhizobium meliloti
(strain 1021)]
Length=240
Score = 154 bits (388), Expect = 5e-50
Identities = 86/237 (36%), Positives = 132/237 (56%), Gaps = 14/237 (6%)
Query 4 ETVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARQQVPDVMILDVGLPDISGF 63
+T+ LV+D++ I ++ L+ EG+ VE + G L+ + P + I D+ +P + G
Sbjct 2 QTIALVDDDRNILTSVSIALEAEGYKVETYTDGASALEGLLARPPQLAIFDIKMPRMDGM 61
Query 64 ELCRQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVRTLLRRV- 122
EL R+L LPV+FLT++ EE+D L GL++GADD++ KPFS R + RV+ +LRR
Sbjct 62 ELLRRLRQKSD-LPVIFLTSKDEEIDELFGLKMGADDFITKPFSQRLLVERVKAILRRAA 120
Query 123 ------------KKFSTPSPVIRIGHFELNEPAAQISWFDTPLTLTRYEFLLLKTLLKSP 170
K TPS + G +++ +W + +TLT EFL+L L + P
Sbjct 121 NREAAAGGTGPAKNADTPSRSLERGQLVMDQERHTCTWKNESVTLTVTEFLILHALAQRP 180
Query 171 GRVWSRQQLMDIVWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGMGYSLR 227
G V SR LMD +++ DRT+D+HIK LR K + ++ D I T G+GY R
Sbjct 181 GVVKSRDALMDAAYDEQVYVDDRTIDSHIKRLRKKFKMVDNDFDMIETLYGVGYRFR 237
>P39663 Alkaline phosphatase synthesis transcriptional regulatory
protein SphR [Synechococcus elongatus (strain ATCC 33912
/ PCC 7942 / FACHB-805)]
Length=257
Score = 154 bits (389), Expect = 5e-50
Identities = 91/231 (39%), Positives = 132/231 (57%), Gaps = 10/231 (4%)
Query 6 VWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARQ---------QVPDVMILDVG 56
+ +VEDE I D + +LQQEGF V+V G L+ R + PD+++LD+
Sbjct 26 ILVVEDEAVIRDMVALVLQQEGFTVDVAADGRTALNYFRSDSPEAGSVTENPDLVVLDLM 85
Query 57 LPDISGFELCRQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVR 116
LP ++G + CR L +P+L L+A+ E DR++GLEIGADDY+ KPF RE+ AR R
Sbjct 86 LPAVNGLDFCRLLRRQGVTVPILMLSAKDTETDRVVGLEIGADDYLTKPFGTRELVARCR 145
Query 117 TLLRRVKKFSTPSP-VIRIGHFELNEPAAQISWFDTPLTLTRYEFLLLKTLLKSPGRVWS 175
LLRR + +P V+R +L ++ D LTL+ EF LL+ ++ P RVWS
Sbjct 146 ALLRRSQNQPAETPAVLRYEGLKLFPEECRVLLDDRELTLSPKEFRLLELFMRHPRRVWS 205
Query 176 RQQLMDIVWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGMGYSL 226
R QL++ +W +T+D HI+ LR K+ A + S + T RG GY L
Sbjct 206 RDQLLEKIWGIDFMGDSKTIDVHIRWLREKIEANPSNPSYLLTVRGFGYRL 256
>Q9F868 Sensory transduction protein RegX3 [Mycolicibacterium
smegmatis (strain ATCC 700084 / mc(2)155)]
Length=228
Score = 151 bits (382), Expect = 3e-49
Identities = 86/225 (38%), Positives = 136/225 (60%), Gaps = 4/225 (2%)
Query 5 TVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARQQVPDVMILDVGLPDISGFE 64
+V +VEDE+ +AD L ++L++EGF V G L + + D+++LD+ LP +SG +
Sbjct 3 SVLIVEDEESLADPLAFLLRKEGFEATVVGDGPSALAEFERSGADIVLLDLMLPGMSGTD 62
Query 65 LCRQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVRTLLRR--- 121
+C+QL A ++PV+ +TAR E+D+++GLE+GADDYV KP+S RE+ AR+R +LRR
Sbjct 63 VCKQLRA-RSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGAD 121
Query 122 VKKFSTPSPVIRIGHFELNEPAAQISWFDTPLTLTRYEFLLLKTLLKSPGRVWSRQQLMD 181
V+ G ++ +S P+TL EF LL+ L+++ GRV +R QL+D
Sbjct 122 NDDAGADDGVLEAGPVRMDVERHVVSVNGEPITLPLKEFDLLEYLMRNSGRVLTRGQLID 181
Query 182 IVWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGMGYSL 226
VW +T+D H+K LR+K+ + + T RG+GY L
Sbjct 182 RVWGADYVGDTKTLDVHVKRLRSKIEEDPANPVHLVTVRGLGYKL 226
>P9WGL8 Sensory transduction protein RegX3 [Mycobacterium tuberculosis
(strain CDC 1551 / Oshkosh)]
Length=227
Score = 149 bits (376), Expect = 2e-48
Identities = 86/224 (38%), Positives = 136/224 (61%), Gaps = 3/224 (1%)
Query 5 TVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARQQVPDVMILDVGLPDISGFE 64
+V +VEDE+ +AD L ++L++EGF V G L + + D+++LD+ LP +SG +
Sbjct 3 SVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTD 62
Query 65 LCRQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVRTLLRR--V 122
+C+QL A ++PV+ +TAR E+D+++GLE+GADDYV KP+S RE+ AR+R +LRR
Sbjct 63 VCKQLRA-RSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD 121
Query 123 KKFSTPSPVIRIGHFELNEPAAQISWFDTPLTLTRYEFLLLKTLLKSPGRVWSRQQLMDI 182
V+ G ++ +S +TL EF LL+ L+++ GRV +R QL+D
Sbjct 122 DDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDR 181
Query 183 VWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGMGYSL 226
VW +T+D H+K LR+K+ A + + T RG+GY L
Sbjct 182 VWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKL 225
>P9WGL9 Sensory transduction protein RegX3 [Mycobacterium tuberculosis
(strain ATCC 25618 / H37Rv)]
Length=227
Score = 149 bits (376), Expect = 2e-48
Identities = 86/224 (38%), Positives = 136/224 (61%), Gaps = 3/224 (1%)
Query 5 TVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARQQVPDVMILDVGLPDISGFE 64
+V +VEDE+ +AD L ++L++EGF V G L + + D+++LD+ LP +SG +
Sbjct 3 SVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTD 62
Query 65 LCRQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVRTLLRR--V 122
+C+QL A ++PV+ +TAR E+D+++GLE+GADDYV KP+S RE+ AR+R +LRR
Sbjct 63 VCKQLRA-RSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD 121
Query 123 KKFSTPSPVIRIGHFELNEPAAQISWFDTPLTLTRYEFLLLKTLLKSPGRVWSRQQLMDI 182
V+ G ++ +S +TL EF LL+ L+++ GRV +R QL+D
Sbjct 122 DDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDR 181
Query 183 VWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGMGYSL 226
VW +T+D H+K LR+K+ A + + T RG+GY L
Sbjct 182 VWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKL 225
>O07130 Sensory transduction protein RegX3 [Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97)]
Length=227
Score = 149 bits (376), Expect = 2e-48
Identities = 86/224 (38%), Positives = 136/224 (61%), Gaps = 3/224 (1%)
Query 5 TVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARQQVPDVMILDVGLPDISGFE 64
+V +VEDE+ +AD L ++L++EGF V G L + + D+++LD+ LP +SG +
Sbjct 3 SVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTD 62
Query 65 LCRQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVRTLLRR--V 122
+C+QL A ++PV+ +TAR E+D+++GLE+GADDYV KP+S RE+ AR+R +LRR
Sbjct 63 VCKQLRA-RSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD 121
Query 123 KKFSTPSPVIRIGHFELNEPAAQISWFDTPLTLTRYEFLLLKTLLKSPGRVWSRQQLMDI 182
V+ G ++ +S +TL EF LL+ L+++ GRV +R QL+D
Sbjct 122 DDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDR 181
Query 183 VWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGMGYSL 226
VW +T+D H+K LR+K+ A + + T RG+GY L
Sbjct 182 VWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKL 225
>A0QTK2 DNA-binding response regulator MtrA [Mycolicibacterium
smegmatis (strain ATCC 700084 / mc(2)155)]
Length=228
Score = 147 bits (372), Expect = 9e-48
Identities = 83/222 (37%), Positives = 134/222 (60%), Gaps = 3/222 (1%)
Query 3 RETVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARQQVPDVMILDVGLPDISG 62
R+ + +V+D+ +A+ L +L+ EGF V G L R+ PD+++LD+ LP ++G
Sbjct 5 RQRILVVDDDPSLAEMLTIVLRGEGFDTAVIGDGSQALTAVRELRPDLVLLDLMLPGMNG 64
Query 63 FELCRQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVRTLLRRV 122
++CR L A +P++ LTA+++ VD +LGLE GADDYV KPF P+E+ ARVR LRR
Sbjct 65 IDVCRVLRA-DSGVPIVMLTAKTDTVDVVLGLESGADDYVMKPFKPKELVARVRARLRRN 123
Query 123 KKFSTPSPVIRIGHFELNEPAAQISWFDTPLTLTRYEFLLLKTLLKSPGRVWSRQQLMDI 182
+ P+ ++ IG E++ PA +++ ++LT EF LL L + P +V++R L++
Sbjct 124 E--DEPAEMLSIGDVEIDVPAHKVTRQGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQ 181
Query 183 VWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGMGY 224
VW R V+ H++ LRAK+ + + T RG+GY
Sbjct 182 VWGYRHPADTRLVNVHVQRLRAKVEKDPENPQVVLTVRGVGY 223
>P13792 Alkaline phosphatase synthesis transcriptional regulatory
protein PhoP [Bacillus subtilis (strain 168)]
Length=240
Score = 147 bits (371), Expect = 2e-47
Identities = 93/232 (40%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query 6 VWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARQQVPDVMILDVGLPDISGFEL 65
+ +V+DE+ I L Y L++ G+ V G L KA + PD+++LDV LP + G E+
Sbjct 5 ILVVDDEESIVTLLQYNLERSGYDVITASDGEEALKKAETEKPDLIVLDVMLPKLDGIEV 64
Query 66 CRQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVRTLLRRVKKF 125
C+QL P+L LTA+ EE D++LGLE+GADDY+ KPFSPREV ARV+ +LRR +
Sbjct 65 CKQLRQQKLMFPILMLTAKDEEFDKVLGLELGADDYMTKPFSPREVNARVKAILRR-SEI 123
Query 126 STPSPVIR---------IGHFELNEPAAQISWFDTPLTLTRYEFLLLKTLLKSPGRVWSR 176
+ PS ++ IG ++ + + ++ L LT EF LL L + GRV +R
Sbjct 124 AAPSSEMKNDEMEGQIVIGDLKILPDHYEAYFKESQLELTPKEFELLLYLGRHKGRVLTR 183
Query 177 QQLMDIVW--EDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGMGYSL 226
L+ VW + A DT R VD HI LR K+ I T RG+GY L
Sbjct 184 DLLLSAVWNYDFAGDT--RIVDVHISHLRDKIENNTKKPIYIKTIRGLGYKL 233
>P9WGM7 DNA-binding response regulator MtrA [Mycobacterium tuberculosis
(strain ATCC 25618 / H37Rv)]
Length=228
Score = 145 bits (366), Expect = 7e-47
Identities = 81/222 (36%), Positives = 133/222 (60%), Gaps = 3/222 (1%)
Query 3 RETVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARQQVPDVMILDVGLPDISG 62
R+ + +V+D+ +A+ L +L+ EGF V G L R+ PD+++LD+ LP ++G
Sbjct 5 RQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNG 64
Query 63 FELCRQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVRTLLRRV 122
++CR L A +P++ LTA+++ VD +LGLE GADDY+ KPF P+E+ ARVR LRR
Sbjct 65 IDVCRVLRA-DSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRR- 122
Query 123 KKFSTPSPVIRIGHFELNEPAAQISWFDTPLTLTRYEFLLLKTLLKSPGRVWSRQQLMDI 182
P+ ++ I E++ PA +++ ++LT EF LL L + P +V++R L++
Sbjct 123 -NDDEPAEMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQ 181
Query 183 VWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGMGY 224
VW R V+ H++ LRAK+ + + + T RG+GY
Sbjct 182 VWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGY 223
Lambda K H a alpha
0.326 0.141 0.426 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 516610
Database: 685ae32a09cb02bbc430eecdc89c1da4.SwissProt.fasta
Posted date: Jun 1, 2024 3:44 AM
Number of letters in database: 3,279
Number of sequences in database: 14
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
