BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 34fe2c1140e3740e33f5f3f549d8724a.SwissProt.fasta
           1 sequences; 292 total letters



Query= Z5712

Length=282
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P39267 Uncharacterized protein YjcZ [Escherichia coli (strain K12)]   565     0.0  


>P39267 Uncharacterized protein YjcZ [Escherichia coli (strain 
K12)]
Length=292

 Score = 565 bits (1457),  Expect = 0.0
 Identities = 275/280 (98%), Positives = 278/280 (99%), Gaps = 0/280 (0%)

Query  1    VLESVYPRFLVDLAQGDDARLPQAHQQQFRERLMQELLARVQLQTWTNGGMLNAPLSLRL  60
            VLESVYPRFLVDLAQGDDARLPQAHQQQFRERLMQELL+RVQLQTWTNGGMLNAPLSLRL
Sbjct  12   VLESVYPRFLVDLAQGDDARLPQAHQQQFRERLMQELLSRVQLQTWTNGGMLNAPLSLRL  71

Query  61   TLVEKLASMLDPGHLALTQIAQHLALLQKMDHRQHSAFPELPQQIAALYEWFSARCRWKE  120
            TLVEKLASMLDPGHLALTQIAQHLALLQKMDHRQHSAFPELPQQIAALYEWFSARCRWKE
Sbjct  72   TLVEKLASMLDPGHLALTQIAQHLALLQKMDHRQHSAFPELPQQIAALYEWFSARCRWKE  131

Query  121  KALTQRGLLVQAGEQSEQIFTRWRAGAYNAWSLPGRCFIVLEELRWGAFGDACRLGSPQA  180
            KALTQRGLLVQAG+QSEQIFTRWRAGAYNAWSLPGRCFIVLEELRWGAFGDACRLGSPQA
Sbjct  132  KALTQRGLLVQAGDQSEQIFTRWRAGAYNAWSLPGRCFIVLEELRWGAFGDACRLGSPQA  191

Query  181  VALLLGDLRVKATQHLAESINAAPTTRHYYHQWFASSTVPTGGDHADFLSWLGKWTTADK  240
            VALLLGDL  KATQHLAESINAAPTTRHYYHQWFASSTVPTGG+HADFLSWLGKWTTADK
Sbjct  192  VALLLGDLLEKATQHLAESINAAPTTRHYYHQWFASSTVPTGGEHADFLSWLGKWTTADK  251

Query  241  QPVCWSVTQRWQTVALGMPRLCSAQRLAGAMLEEIFSVNL  280
            QPVCWSVTQRWQTVALGMPRLCSAQRLAGAMLEEIFSVNL
Sbjct  252  QPVCWSVTQRWQTVALGMPRLCSAQRLAGAMLEEIFSVNL  291



Lambda      K        H        a         alpha
   0.325    0.135    0.434    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 68096


  Database: 34fe2c1140e3740e33f5f3f549d8724a.SwissProt.fasta
    Posted date:  May 6, 2024  3:59 PM
  Number of letters in database: 292
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40