BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 9d26739f4f8f58d6ec6aae37740b8b82.SwissProt.fasta
18 sequences; 5,797 total letters
Query= Z5506
Length=107
Score E
Sequences producing significant alignments: (Bits) Value
P69819 PTS system fructose-like EIIB component 2 [Shigella flexneri] 203 5e-73
P69817 PTS system fructose-like EIIB component 2 [Escherichia col... 203 5e-73
P69818 PTS system fructose-like EIIB component 2 [Escherichia col... 203 5e-73
P69816 PTS system fructose-like EIIB component 2 [Escherichia col... 203 5e-73
P69808 PTS system fructose-like EIIB component 1 [Escherichia col... 98.2 2e-31
P69809 PTS system fructose-like EIIB component 1 [Escherichia col... 98.2 2e-31
P69810 PTS system fructose-like EIIB component 1 [Escherichia col... 98.2 2e-31
Q821A9 PTS system fructose-like EIIB component 1 [Shigella flexneri] 96.7 9e-31
P32154 PTS system fructose-like EIIB component / PTS system fruct... 100 1e-29
P20966 PTS system fructose-specific EIIB component / PTS system f... 99.4 5e-29
P44714 PTS system fructose-specific EIIB component / PTS system f... 97.8 2e-28
P23387 PTS system fructose-specific EIIB component / PTS system f... 97.4 2e-28
O31645 Mannose-specific phosphotransferase enzyme IIB component /... 96.3 6e-28
Q9KM72 PTS system fructose-specific EIIB component / PTS system f... 94.4 3e-27
D4GYE1 PTS system fructose-specific EIIB component [Haloferax vol... 86.3 4e-26
P32676 PTS system fructose-like EIIB component 3 [Escherichia col... 84.7 5e-26
P47308 PTS system fructose-specific EIIA component / PTS system f... 90.5 7e-26
P23355 PTS system fructose-specific EIIB component / PTS system f... 88.2 4e-25
>P69819 PTS system fructose-like EIIB component 2 [Shigella flexneri]
Length=106
Score = 203 bits (516), Expect = 5e-73
Identities = 106/106 (100%), Positives = 106/106 (100%), Gaps = 0/106 (0%)
Query 1 MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMV 60
MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMV
Sbjct 1 MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMV 60
Query 61 ILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLAQTA 106
ILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLAQTA
Sbjct 61 ILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLAQTA 106
>P69817 PTS system fructose-like EIIB component 2 [Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=106
Score = 203 bits (516), Expect = 5e-73
Identities = 106/106 (100%), Positives = 106/106 (100%), Gaps = 0/106 (0%)
Query 1 MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMV 60
MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMV
Sbjct 1 MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMV 60
Query 61 ILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLAQTA 106
ILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLAQTA
Sbjct 61 ILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLAQTA 106
>P69818 PTS system fructose-like EIIB component 2 [Escherichia
coli O157:H7]
Length=106
Score = 203 bits (516), Expect = 5e-73
Identities = 106/106 (100%), Positives = 106/106 (100%), Gaps = 0/106 (0%)
Query 1 MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMV 60
MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMV
Sbjct 1 MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMV 60
Query 61 ILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLAQTA 106
ILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLAQTA
Sbjct 61 ILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLAQTA 106
>P69816 PTS system fructose-like EIIB component 2 [Escherichia
coli (strain K12)]
Length=106
Score = 203 bits (516), Expect = 5e-73
Identities = 106/106 (100%), Positives = 106/106 (100%), Gaps = 0/106 (0%)
Query 1 MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMV 60
MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMV
Sbjct 1 MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMV 60
Query 61 ILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLAQTA 106
ILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLAQTA
Sbjct 61 ILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLAQTA 106
>P69808 PTS system fructose-like EIIB component 1 [Escherichia
coli (strain K12)]
Length=108
Score = 98.2 bits (243), Expect = 2e-31
Identities = 46/101 (46%), Positives = 71/101 (70%), Gaps = 0/101 (0%)
Query 3 KIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVIL 62
K+IA+ ACP G+AHT+MAA+ALE AA G+EVK+ETQG+ G++N LTA+D+A A ++I
Sbjct 4 KLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIH 63
Query 63 TKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLA 103
+ + + ERF + + + + DA+K A I+ +IE +A
Sbjct 64 SVAVTPEDNERFESRDVYEITLQDAIKNAAGIIKEIEEMIA 104
>P69809 PTS system fructose-like EIIB component 1 [Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=108
Score = 98.2 bits (243), Expect = 2e-31
Identities = 46/101 (46%), Positives = 71/101 (70%), Gaps = 0/101 (0%)
Query 3 KIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVIL 62
K+IA+ ACP G+AHT+MAA+ALE AA G+EVK+ETQG+ G++N LTA+D+A A ++I
Sbjct 4 KLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIH 63
Query 63 TKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLA 103
+ + + ERF + + + + DA+K A I+ +IE +A
Sbjct 64 SVAVTPEDNERFESRDVYEITLQDAIKNAAGIIKEIEEMIA 104
>P69810 PTS system fructose-like EIIB component 1 [Escherichia
coli O157:H7]
Length=108
Score = 98.2 bits (243), Expect = 2e-31
Identities = 46/101 (46%), Positives = 71/101 (70%), Gaps = 0/101 (0%)
Query 3 KIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVIL 62
K+IA+ ACP G+AHT+MAA+ALE AA G+EVK+ETQG+ G++N LTA+D+A A ++I
Sbjct 4 KLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIH 63
Query 63 TKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLA 103
+ + + ERF + + + + DA+K A I+ +IE +A
Sbjct 64 SVAVTPEDNERFESRDVYEITLQDAIKNAAGIIKEIEEMIA 104
>Q821A9 PTS system fructose-like EIIB component 1 [Shigella flexneri]
Length=108
Score = 96.7 bits (239), Expect = 9e-31
Identities = 45/101 (45%), Positives = 70/101 (69%), Gaps = 0/101 (0%)
Query 3 KIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVIL 62
K+IA+ ACP G+AHT+MAA+ LE AA G+EVK+ETQG+ G++N LTA+D+A A ++I
Sbjct 4 KLIALCACPMGLAHTFMAAQVLEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIH 63
Query 63 TKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLA 103
+ + + ERF + + + + DA+K A I+ +IE +A
Sbjct 64 SVAVTPEDNERFESRDVYEITLQDAIKNAAGIIKEIEEMIA 104
>P32154 PTS system fructose-like EIIB component / PTS system fructose-like
EIIC component [Escherichia coli (strain K12)]
Length=483
Score = 100 bits (250), Expect = 1e-29
Identities = 49/98 (50%), Positives = 71/98 (72%), Gaps = 2/98 (2%)
Query 3 KIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVIL 62
+I+A+T CP+G+AHTYM AEALE A++ G +KVETQGS G+EN L++E++A+AD VIL
Sbjct 6 RIVAITNCPAGIAHTYMVAEALEQKARSLGHTIKVETQGSSGVENRLSSEEIAAADYVIL 65
Query 63 TKDIGIKFEE--RFAGKTIVRVNISDAVKRADAIMSKI 98
G+ ++ RFAGK + + IS A+K D I S++
Sbjct 66 ATGRGLSGDDRARFAGKKVYEIAISQALKNIDQIFSEL 103
>P20966 PTS system fructose-specific EIIB component / PTS system
fructose-specific EIIC component [Escherichia coli (strain
K12)]
Length=563
Score = 99.4 bits (246), Expect = 5e-29
Identities = 49/98 (50%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Query 3 KIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVIL 62
+++AVTACP+GVAHT+MAAEA+E+ AK +GW VKVET+GS+G N +T E+VA+AD+VI+
Sbjct 105 RVVAVTACPTGVAHTFMAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAAADLVIV 164
Query 63 TKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEA 100
DI + +FAGK + R + A+K+ + K A
Sbjct 165 AADIEVDL-AKFAGKPMYRTSTGLALKKTAQELDKAVA 201
Score = 17.3 bits (33), Expect = 2.4
Identities = 9/30 (30%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query 1 MTKIIAVTACPSGVAHTYMAAEALESAAKA 30
+ IIA T +G+A+ ++ +++ AKA
Sbjct 534 LVAIIAGTLV-AGLAYAFLKRPEVDAVAKA 562
>P44714 PTS system fructose-specific EIIB component / PTS system
fructose-specific EIIC component [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=556
Score = 97.8 bits (242), Expect = 2e-28
Identities = 46/94 (49%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Query 4 IIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVILT 63
I+AVTACP+GVAHT+M+AEA+E+ AK +GW VKVET+G +G NE+T E+VA+AD+V +
Sbjct 106 IVAVTACPTGVAHTFMSAEAIEAYAKKQGWNVKVETRGQVGAGNEITVEEVAAADLVFVA 165
Query 64 KDIGIKFEERFAGKTIVRVNISDAVKRADAIMSK 97
DI + ++F GK + R + A+K+ + K
Sbjct 166 ADIDVPL-DKFKGKPMYRTSTGLALKKTEQEFDK 198
>P23387 PTS system fructose-specific EIIB component / PTS system
fructose-specific EIIC component [Rhodobacter capsulatus]
Length=578
Score = 97.4 bits (241), Expect = 2e-28
Identities = 41/93 (44%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Query 3 KIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVIL 62
+++A+T+CP+G+AHT+MAA+AL+ A A+GWE+ VETQGS+G +N L+A + +AD+V++
Sbjct 118 RVVAITSCPTGIAHTFMAADALKKTAAARGWEIAVETQGSVGSQNALSAAQIQAADLVVI 177
Query 63 TKDIGIKFEERFAGKTIVRVNISDAVKRADAIM 95
D + + RFAGK + + ++ AVK A ++
Sbjct 178 AADTHVD-DSRFAGKKVYKTSVGAAVKGAAKVL 209
Score = 74.7 bits (182), Expect = 2e-20
Identities = 38/97 (39%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query 1 MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMV 60
M+KI+AVTA GVAHT++AAEAL + A+A G +++VE + G+E L ++A+AD+V
Sbjct 1 MSKIVAVTAGAKGVAHTHLAAEALSATAQALGHQIRVERHSAEGVEAPLQGAEIAAADVV 60
Query 61 ILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSK 97
++ D+ I+ + RF K + R + + AV + A++++
Sbjct 61 LIAADLRIE-DVRFVTKPVYRTSTARAVTQTAAVLAE 96
>O31645 Mannose-specific phosphotransferase enzyme IIB component
/ Mannose permease IIC component / Mannose-specific phosphotransferase
enzyme IIA component [Bacillus subtilis (strain
168)]
Length=650
Score = 96.3 bits (238), Expect = 6e-28
Identities = 42/95 (44%), Positives = 68/95 (72%), Gaps = 1/95 (1%)
Query 3 KIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVIL 62
K++A+T+CP+G+AHTYMAAE L+ AA G +KVETQG IG+EN+LT E++ AD +I+
Sbjct 2 KLLAITSCPNGIAHTYMAAENLQKAADRLGVSIKVETQGGIGVENKLTEEEIREADAIII 61
Query 63 TKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSK 97
D + ++RF GK ++ V + D +++ + ++ K
Sbjct 62 AADRSVN-KDRFIGKKLLSVGVQDGIRKPEELIQK 95
>Q9KM72 PTS system fructose-specific EIIB component / PTS system
fructose-specific EIIC component [Vibrio cholerae serotype
O1 (strain ATCC 39315 / El Tor Inaba N16961)]
Length=580
Score = 94.4 bits (233), Expect = 3e-27
Identities = 43/88 (49%), Positives = 68/88 (77%), Gaps = 1/88 (1%)
Query 3 KIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVIL 62
KI+A+TACP+GVAHT+MAAEALE+ A +G ++KVET+GS+G +N+LT +++A+AD+VI+
Sbjct 125 KIVAITACPTGVAHTFMAAEALEAEATRQGHQIKVETRGSVGAKNQLTEQEIAAADLVII 184
Query 63 TKDIGIKFEERFAGKTIVRVNISDAVKR 90
DI + +RF GK + + + +K+
Sbjct 185 AADIDVPL-DRFNGKKLYKTSTGLTLKK 211
Score = 61.2 bits (147), Expect = 1e-15
Identities = 33/83 (40%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query 3 KIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVIL 62
KI VTACPSGVA++ +AA L+ A+K GWE +E ++ + L+ E++ AD+VIL
Sbjct 4 KIAIVTACPSGVANSIIAAGLLQQASKTLGWEAYIECHSTVIAGHTLSEEEINKADLVIL 63
Query 63 TKDIGIKFEERFAGKTIVRVNIS 85
+ I +RF GK + + I+
Sbjct 64 AANGKIDM-QRFVGKKVYQSPIT 85
>D4GYE1 PTS system fructose-specific EIIB component [Haloferax
volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742
/ NCIMB 2012 / VKM B-1768 / DS2)]
Length=158
Score = 86.3 bits (212), Expect = 4e-26
Identities = 39/95 (41%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query 3 KIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVIL 62
K++AVT+CP+G+AH+ MAAE L A + G ++ VE QG++G ++EL ++ +A AD VI+
Sbjct 2 KLVAVTSCPTGIAHSQMAAENLLQAGERLGHDIDVEVQGAMGTQDELASDAIAEADAVII 61
Query 63 TKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSK 97
T D + +RF GK +++ + D V A+A++ K
Sbjct 62 TSDTSVS-RDRFDGKLVLKGTVKDGVNNAEAVVQK 95
>P32676 PTS system fructose-like EIIB component 3 [Escherichia
coli (strain K12)]
Length=113
Score = 84.7 bits (208), Expect = 5e-26
Identities = 44/103 (43%), Positives = 61/103 (59%), Gaps = 0/103 (0%)
Query 1 MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMV 60
M ++AVTAC SGVAHTYMAAE LE + W V +ETQG++G EN L ED+ AD+
Sbjct 1 MAYLVAVTACVSGVAHTYMAAERLEKLCLLEKWGVSIETQGALGTENRLADEDIRRADVA 60
Query 61 ILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLA 103
+L DI + ERF V+ +I ++ +MS + L+
Sbjct 61 LLITDIELAGAERFEHCRYVQCSIYAFLREPQRVMSAVRKVLS 103
>P47308 PTS system fructose-specific EIIA component / PTS system
fructose-specific EIIB component / PTS system fructose-specific
EIIC component [Mycoplasma genitalium (strain ATCC 33530
/ DSM 19775 / NCTC 10195 / G37)]
Length=680
Score = 90.5 bits (223), Expect = 7e-26
Identities = 44/95 (46%), Positives = 66/95 (69%), Gaps = 0/95 (0%)
Query 5 IAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVILTK 64
+AVTACP+G+AHT+MA EALE+ AK VKVETQG+ G++N+LT++D+ +A VIL
Sbjct 169 VAVTACPTGIAHTFMAKEALEAFAKKHNLYVKVETQGTDGIQNQLTSDDINNAKGVILAC 228
Query 65 DIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIE 99
D I F +A K ++ V+ + A+K+ D + I+
Sbjct 229 DRLIDFSRFYANKNVIEVSTTKAIKKPDEVYELIK 263
>P23355 PTS system fructose-specific EIIB component / PTS system
fructose-specific EIIC component [Xanthomonas campestris
pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG
568 / P 25)]
Length=580
Score = 88.2 bits (217), Expect = 4e-25
Identities = 40/95 (42%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query 3 KIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVIL 62
+I+A+T+CP+G+AHT+MAAE L+ AAK G++++VETQGS+G ++ LT E++ +AD+VI+
Sbjct 119 RIVAITSCPTGIAHTFMAAEGLQQAAKKLGYQMRVETQGSVGAQDALTDEEIRAADVVII 178
Query 63 TKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSK 97
D + RF GK + + A+ A++ K
Sbjct 179 AADREVDL-ARFGGKRLFKSGTKPAINDGPALIQK 212
Lambda K H a alpha
0.320 0.130 0.352 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 352797
Database: 9d26739f4f8f58d6ec6aae37740b8b82.SwissProt.fasta
Posted date: May 31, 2024 8:20 AM
Number of letters in database: 5,797
Number of sequences in database: 18
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
