Comparative Genomics

Z5324 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 9238e3093223e43f773844d332e1ed36.TrEMBL.fasta
           10 sequences; 1,329 total letters



Query= Z5324

Length=162
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A0A0H3JQW2 Uncharacterized protein [Escherichia coli O157:H7]         326     1e-120
C3SKF2 Uncharacterized protein [Escherichia coli]                     326     1e-120
Q329Y3 CyaX [Shigella dysenteriae serotype 1 (strain Sd197)]          322     4e-119
Q31UI0 CyaX [Shigella boydii serotype 4 (strain Sb227)]               319     9e-118
Q3YVF9 CyaX protein [Shigella sonnei (strain Ss046)]                  315     3e-116
A0A0H3PQ67 CyaX protein [Escherichia coli O157:H7 (strain EC869)]     212     3e-76 
D2ABX7 Uncharacterized protein [Shigella flexneri serotype X (str...  211     8e-76 
B2TUW3 CyaX protein [Shigella boydii serotype 18 (strain CDC 3083...  209     5e-75 
A0A090NCL0 CyaX protein [Shigella dysenteriae WRSd3]                  208     1e-74 
A0A0A7A1R0 CyaX protein [Shigella dysenteriae 1617]                   208     1e-74 


>A0A0H3JQW2 Uncharacterized protein [Escherichia coli O157:H7]
Length=161

 Score = 326 bits (836),  Expect = 1e-120
 Identities = 161/161 (100%), Positives = 161/161 (100%), Gaps = 0/161 (0%)

Query  1    MVAALFGCQPYLVQRFLAVDNDFAAILKGNGQHAAVDFAVDIAVAIPVVQTLFNGQPQLI  60
            MVAALFGCQPYLVQRFLAVDNDFAAILKGNGQHAAVDFAVDIAVAIPVVQTLFNGQPQLI
Sbjct  1    MVAALFGCQPYLVQRFLAVDNDFAAILKGNGQHAAVDFAVDIAVAIPVVQTLFNGQPQLI  60

Query  61   SQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAALRHDSSVTGIMMSLCSERFVSSL  120
            SQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAALRHDSSVTGIMMSLCSERFVSSL
Sbjct  61   SQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAALRHDSSVTGIMMSLCSERFVSSL  120

Query  121  GRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA  161
            GRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA
Sbjct  121  GRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA  161


>C3SKF2 Uncharacterized protein [Escherichia coli]
Length=161

 Score = 326 bits (836),  Expect = 1e-120
 Identities = 161/161 (100%), Positives = 161/161 (100%), Gaps = 0/161 (0%)

Query  1    MVAALFGCQPYLVQRFLAVDNDFAAILKGNGQHAAVDFAVDIAVAIPVVQTLFNGQPQLI  60
            MVAALFGCQPYLVQRFLAVDNDFAAILKGNGQHAAVDFAVDIAVAIPVVQTLFNGQPQLI
Sbjct  1    MVAALFGCQPYLVQRFLAVDNDFAAILKGNGQHAAVDFAVDIAVAIPVVQTLFNGQPQLI  60

Query  61   SQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAALRHDSSVTGIMMSLCSERFVSSL  120
            SQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAALRHDSSVTGIMMSLCSERFVSSL
Sbjct  61   SQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAALRHDSSVTGIMMSLCSERFVSSL  120

Query  121  GRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA  161
            GRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA
Sbjct  121  GRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA  161


>Q329Y3 CyaX [Shigella dysenteriae serotype 1 (strain Sd197)]
Length=161

 Score = 322 bits (826),  Expect = 4e-119
 Identities = 159/161 (99%), Positives = 159/161 (99%), Gaps = 0/161 (0%)

Query  1    MVAALFGCQPYLVQRFLAVDNDFAAILKGNGQHAAVDFAVDIAVAIPVVQTLFNGQPQLI  60
            MVAALFGCQPYLVQRFLAVDNDFAAILKGNGQHAAVDFAVDIAVAIPVVQTLFNGQPQLI
Sbjct  1    MVAALFGCQPYLVQRFLAVDNDFAAILKGNGQHAAVDFAVDIAVAIPVVQTLFNGQPQLI  60

Query  61   SQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAALRHDSSVTGIMMSLCSERFVSSL  120
            SQAMKFTVVHCCILFLSDGGSIAAWGQGFKVC SAAA RHDSSVTGIMMSLCSERFVSSL
Sbjct  61   SQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCPSAAAFRHDSSVTGIMMSLCSERFVSSL  120

Query  121  GRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA  161
            GRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA
Sbjct  121  GRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA  161


>Q31UI0 CyaX [Shigella boydii serotype 4 (strain Sb227)]
Length=161

 Score = 319 bits (817),  Expect = 9e-118
 Identities = 156/161 (97%), Positives = 157/161 (98%), Gaps = 0/161 (0%)

Query  1    MVAALFGCQPYLVQRFLAVDNDFAAILKGNGQHAAVDFAVDIAVAIPVVQTLFNGQPQLI  60
            MVAALFGCQPYLVQRFLAVDNDFAA+ KGNGQHAAVDFAVDIAVAIPVVQ LFNGQPQLI
Sbjct  1    MVAALFGCQPYLVQRFLAVDNDFAAVFKGNGQHAAVDFAVDIAVAIPVVQMLFNGQPQLI  60

Query  61   SQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAALRHDSSVTGIMMSLCSERFVSSL  120
            SQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAA RHDSSVTGIMMSLC ERFVSSL
Sbjct  61   SQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAAFRHDSSVTGIMMSLCGERFVSSL  120

Query  121  GRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA  161
            GRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA
Sbjct  121  GRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA  161


>Q3YVF9 CyaX protein [Shigella sonnei (strain Ss046)]
Length=161

 Score = 315 bits (807),  Expect = 3e-116
 Identities = 154/161 (96%), Positives = 156/161 (97%), Gaps = 0/161 (0%)

Query  1    MVAALFGCQPYLVQRFLAVDNDFAAILKGNGQHAAVDFAVDIAVAIPVVQTLFNGQPQLI  60
            MVAALFGCQPYLVQRFLAVDNDFAA+ KGNGQHAAVDFAVDIAVAIPVVQ  FNGQP+LI
Sbjct  1    MVAALFGCQPYLVQRFLAVDNDFAAVFKGNGQHAAVDFAVDIAVAIPVVQAFFNGQPELI  60

Query  61   SQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAALRHDSSVTGIMMSLCSERFVSSL  120
            SQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAA RHDSSVTGIMMSLCSERFVSSL
Sbjct  61   SQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAAFRHDSSVTGIMMSLCSERFVSSL  120

Query  121  GRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA  161
            GRSYTTPFPVSGKHYDQVYRASILTLTELKK TNKPHCDSA
Sbjct  121  GRSYTTPFPVSGKHYDQVYRASILTLTELKKTTNKPHCDSA  161


>A0A0H3PQ67 CyaX protein [Escherichia coli O157:H7 (strain EC869)]
Length=103

 Score = 212 bits (539),  Expect = 3e-76
 Identities = 102/103 (99%), Positives = 103/103 (100%), Gaps = 0/103 (0%)

Query  59   LISQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAALRHDSSVTGIMMSLCSERFVS  118
            +ISQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAALRHDSSVTGIMMSLCSERFVS
Sbjct  1    MISQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAALRHDSSVTGIMMSLCSERFVS  60

Query  119  SLGRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA  161
            SLGRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA
Sbjct  61   SLGRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA  103


>D2ABX7 Uncharacterized protein [Shigella flexneri serotype X 
(strain 2002017)]
Length=112

 Score = 211 bits (537),  Expect = 8e-76
 Identities = 104/111 (94%), Positives = 108/111 (97%), Gaps = 0/111 (0%)

Query  1    MVAALFGCQPYLVQRFLAVDNDFAAILKGNGQHAAVDFAVDIAVAIPVVQTLFNGQPQLI  60
            MVAALFGCQP+LVQR LAV+NDFAA+ KGNGQ+AAVDFAVDIAVAIPVVQTLFNGQPQLI
Sbjct  1    MVAALFGCQPHLVQRLLAVNNDFAAVFKGNGQYAAVDFAVDIAVAIPVVQTLFNGQPQLI  60

Query  61   SQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAALRHDSSVTGIMMSL  111
            SQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAA RHDSSVTGIMMSL
Sbjct  61   SQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAAFRHDSSVTGIMMSL  111


>B2TUW3 CyaX protein [Shigella boydii serotype 18 (strain CDC 
3083-94 / BS512)]
Length=103

 Score = 209 bits (531),  Expect = 5e-75
 Identities = 100/103 (97%), Positives = 101/103 (98%), Gaps = 0/103 (0%)

Query  59   LISQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAALRHDSSVTGIMMSLCSERFVS  118
            +ISQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAA RHDSSVTGIMMSLC ERFVS
Sbjct  1    MISQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAAFRHDSSVTGIMMSLCGERFVS  60

Query  119  SLGRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA  161
            SLGRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA
Sbjct  61   SLGRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA  103


>A0A090NCL0 CyaX protein [Shigella dysenteriae WRSd3]
Length=103

 Score = 208 bits (529),  Expect = 1e-74
 Identities = 100/103 (97%), Positives = 101/103 (98%), Gaps = 0/103 (0%)

Query  59   LISQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAALRHDSSVTGIMMSLCSERFVS  118
            +ISQAMKFTVVHCCILFLSDGGSIAAWGQGFKVC SAAA RHDSSVTGIMMSLCSERFVS
Sbjct  1    MISQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCPSAAAFRHDSSVTGIMMSLCSERFVS  60

Query  119  SLGRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA  161
            SLGRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA
Sbjct  61   SLGRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA  103


>A0A0A7A1R0 CyaX protein [Shigella dysenteriae 1617]
Length=103

 Score = 208 bits (529),  Expect = 1e-74
 Identities = 100/103 (97%), Positives = 101/103 (98%), Gaps = 0/103 (0%)

Query  59   LISQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAALRHDSSVTGIMMSLCSERFVS  118
            +ISQAMKFTVVHCCILFLSDGGSIAAWGQGFKVC SAAA RHDSSVTGIMMSLCSERFVS
Sbjct  1    MISQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCPSAAAFRHDSSVTGIMMSLCSERFVS  60

Query  119  SLGRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA  161
            SLGRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA
Sbjct  61   SLGRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKPHCDSA  103



Lambda      K        H        a         alpha
   0.328    0.138    0.426    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 133489


  Database: 9238e3093223e43f773844d332e1ed36.TrEMBL.fasta
    Posted date:  May 20, 2024  1:37 PM
  Number of letters in database: 1,329
  Number of sequences in database:  10



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40