BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 86444c6074d55600a81f8e73742bfb13.SwissProt.fasta
14 sequences; 4,926 total letters
Query= Z4935
Length=338
Score E
Sequences producing significant alignments: (Bits) Value
P37642 Inner membrane protein YhjD [Escherichia coli (strain K12)] 659 0.0
P45417 Uncharacterized protein Dda3937_02003 [Dickeya dadantii (s... 414 2e-149
P44608 UPF0761 membrane protein HI_0276 [Haemophilus influenzae (... 49.3 4e-10
A5UG94 UPF0761 membrane protein CGSHiGG_04180 [Haemophilus influe... 49.3 4e-10
A5UAL3 UPF0761 membrane protein CGSHiEE_01670 [Haemophilus influe... 49.3 4e-10
Q4QNR3 UPF0761 membrane protein NTHI0384 [Haemophilus influenzae ... 47.8 1e-09
Q5QV33 UPF0761 membrane protein IL2447 [Idiomarina loihiensis (st... 46.2 4e-09
A5WD44 UPF0761 membrane protein PsycPRwf_0630 [Psychrobacter sp. ... 42.7 9e-08
Q8XZ47 UPF0761 membrane protein RSc1559 [Ralstonia nicotianae (st... 37.0 5e-06
C6AQL9 UPF0761 membrane protein NT05HA_1801 [Aggregatibacter aphr... 36.6 6e-06
Q9I507 UPF0761 membrane protein PA0951 [Pseudomonas aeruginosa (s... 35.4 2e-05
B7UXY2 UPF0761 membrane protein PLES_43641 [Pseudomonas aeruginos... 35.4 2e-05
Q02IB2 UPF0761 membrane protein PA14_51960 [Pseudomonas aeruginos... 35.4 2e-05
A6VA22 UPF0761 membrane protein PSPA7_4558 [Pseudomonas aeruginos... 35.0 2e-05
>P37642 Inner membrane protein YhjD [Escherichia coli (strain
K12)]
Length=337
Score = 659 bits (1700), Expect = 0.0
Identities = 334/337 (99%), Positives = 334/337 (99%), Gaps = 0/337 (0%)
Query 1 MTQENEIKRPTQDLEHEPIKQLDNSEKGGKVSQALETVTTTAEKVQRQPVIAHLIRATER 60
MTQENEIKRP QDLEHEPIK LDNSEKG KVSQALETVTTTAEKVQRQPVIAHLIRATER
Sbjct 1 MTQENEIKRPIQDLEHEPIKPLDNSEKGSKVSQALETVTTTAEKVQRQPVIAHLIRATER 60
Query 61 FNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQNISDPTLA 120
FNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQNISDPTLA
Sbjct 61 FNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQNISDPTLA 120
Query 121 ATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQDQEKFWV 180
ATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQDQEKFWV
Sbjct 121 ATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQDQEKFWV 180
Query 181 KYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTWRLIGLAISIFA 240
KYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTWRLIGLAISIFA
Sbjct 181 KYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTWRLIGLAISIFA 240
Query 241 NYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMKSPSGAAFGSVL 300
NYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMKSPSGAAFGSVL
Sbjct 241 NYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMKSPSGAAFGSVL 300
Query 301 GLMAFFYFFARLTLFCAAWIATAEYKDDPRMPGKTQP 337
GLMAFFYFFARLTLFCAAWIATAEYKDDPRMPGKTQP
Sbjct 301 GLMAFFYFFARLTLFCAAWIATAEYKDDPRMPGKTQP 337
>P45417 Uncharacterized protein Dda3937_02003 [Dickeya dadantii
(strain 3937)]
Length=328
Score = 414 bits (1065), Expect = 2e-149
Identities = 204/313 (65%), Positives = 244/313 (78%), Gaps = 0/313 (0%)
Query 16 HEPIKQLDNSEKGGKVSQALETVTTTAEKVQRQPVIAHLIRATERFNDRLGNQFGAAITY 75
++P G Q VT +++ P IAH IRA +RFNDR+GNQFGAAITY
Sbjct 6 NQPRPSTKQDPSSGASRQRFGYVTGWLHRIRSVPAIAHFIRAGDRFNDRMGNQFGAAITY 65
Query 76 FSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQNISDPTLAATLKNTINTAVQQRT 135
FSFLS+IPILMVSFA GFVLAS+P LL + ++I+ +ISDP+LA TLKNT+NTAV+QRT
Sbjct 66 FSFLSLIPILMVSFATAGFVLASNPDLLTGLINRIVNSISDPSLARTLKNTVNTAVRQRT 125
Query 136 TVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQDQEKFWVKYLRDFISLIGLLIA 195
TVGL GL +ALYSG+NW+GNLREAI AQSRDVWER P ++EK +++YL DF+SLIGLL+A
Sbjct 126 TVGLTGLLIALYSGVNWIGNLREAIHAQSRDVWERQPHEEEKIYLRYLWDFLSLIGLLLA 185
Query 196 LIVTLSITSVAGSAQQMIISALHLNSIEWLKPTWRLIGLAISIFANYLLFFWIFWRLPRH 255
L++TL +TSVAGSAQ I+ AL LN I+WL+P LI L+ISIFANYLLF WI W LPRH
Sbjct 186 LVITLFLTSVAGSAQATIVRALGLNGIDWLRPVMTLIALSISIFANYLLFLWILWVLPRH 245
Query 256 RPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMKSPSGAAFGSVLGLMAFFYFFARLTLF 315
PR+ L+RGT +AAIGFE +K MT LP L SPSGAAFGSV+GLM FFYFFARLTLF
Sbjct 246 NPRRGPLLRGTLMAAIGFEALKFAMTVALPELATSPSGAAFGSVIGLMTFFYFFARLTLF 305
Query 316 CAAWIATAEYKDD 328
CAAWIATA+ K D
Sbjct 306 CAAWIATADPKTD 318
>P44608 UPF0761 membrane protein HI_0276 [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=269
Score = 49.3 bits (116), Expect = 4e-10
Identities = 57/239 (24%), Positives = 107/239 (45%), Gaps = 37/239 (15%)
Query 59 ERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQ---DIFDKILQNIS 115
+RF++ NQ A+TY + L+M+P++MV F+ + ++ P+ + ++ + I N +
Sbjct 13 KRFSENKLNQVAGALTYSTMLAMVPLVMVIFS----IFSAFPVFNEVTGELKEMIFTNFA 68
Query 116 DPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQDQ 175
P+ + + I+ V + VG+ + + + N+ + + + RSP
Sbjct 69 -PSASDMVGEYIDQFVSNSKKMSAVGIVSLIAVALMLINNIDRTLNSIWHNSQSRSPLSS 127
Query 176 -EKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTWRLIGL 234
+W +I L LI+ +SI ++ + M + HL+ +GL
Sbjct 128 FAIYW---------MILTLGPLIIGVSI-GISSYIKIMFEQSEHLS-----------LGL 166
Query 235 AISIFANYLLFFWIFWRLPRHRPRKKALIR----GTFLAAIGFEVIKIVMTY---TLPS 286
+ F +L ++IF + P KK I+ G FLAAI F + K T+ T PS
Sbjct 167 KLLSFVPFLFTWFIFTLIYTVVPNKKVKIKHSAYGAFLAAIFFTLGKQAFTWYIVTFPS 225
>A5UG94 UPF0761 membrane protein CGSHiGG_04180 [Haemophilus influenzae
(strain PittGG)]
Length=269
Score = 49.3 bits (116), Expect = 4e-10
Identities = 57/239 (24%), Positives = 107/239 (45%), Gaps = 37/239 (15%)
Query 59 ERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQ---DIFDKILQNIS 115
+RF++ NQ A+TY + L+M+P++MV F+ + ++ P+ + ++ + I N +
Sbjct 13 KRFSENKLNQVAGALTYSTMLAMVPLVMVIFS----IFSAFPVFNEVTGELKEMIFTNFA 68
Query 116 DPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQDQ 175
P+ + + I+ V + VG+ + + + N+ + + + RSP
Sbjct 69 -PSASDMVGEYIDQFVSNSKKMSAVGIVSLIAVALMLINNIDRTLNSIWHNSQSRSPLSS 127
Query 176 -EKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTWRLIGL 234
+W +I L LI+ +SI ++ + M + HL+ +GL
Sbjct 128 FAIYW---------MILTLGPLIIGVSI-GISSYIKIMFEQSEHLS-----------LGL 166
Query 235 AISIFANYLLFFWIFWRLPRHRPRKKALIR----GTFLAAIGFEVIKIVMTY---TLPS 286
+ F +L ++IF + P KK I+ G FLAAI F + K T+ T PS
Sbjct 167 KLLSFVPFLFTWFIFTLIYTVVPNKKVKIKHSAYGAFLAAIFFTLGKQAFTWYIVTFPS 225
>A5UAL3 UPF0761 membrane protein CGSHiEE_01670 [Haemophilus influenzae
(strain PittEE)]
Length=269
Score = 49.3 bits (116), Expect = 4e-10
Identities = 57/239 (24%), Positives = 107/239 (45%), Gaps = 37/239 (15%)
Query 59 ERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQ---DIFDKILQNIS 115
+RF++ NQ A+TY + L+M+P++MV F+ + ++ P+ + ++ + I N +
Sbjct 13 KRFSENKLNQVAGALTYSTMLAMVPLVMVIFS----IFSAFPVFNEVTGELKEMIFTNFA 68
Query 116 DPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQDQ 175
P+ + + I+ V + VG+ + + + N+ + + + RSP
Sbjct 69 -PSASDMVGEYIDQFVSNSKKMSAVGIVSLIAVALMLINNIDRTLNSIWHNSQSRSPLSS 127
Query 176 -EKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTWRLIGL 234
+W +I L LI+ +SI ++ + M + HL+ +GL
Sbjct 128 FAIYW---------MILTLGPLIIGVSI-GISSYIKIMFEQSEHLS-----------LGL 166
Query 235 AISIFANYLLFFWIFWRLPRHRPRKKALIR----GTFLAAIGFEVIKIVMTY---TLPS 286
+ F +L ++IF + P KK I+ G FLAAI F + K T+ T PS
Sbjct 167 KLLSFVPFLFTWFIFTLIYTVVPNKKVKIKHSAYGAFLAAIFFTLGKQAFTWYIVTFPS 225
>Q4QNR3 UPF0761 membrane protein NTHI0384 [Haemophilus influenzae
(strain 86-028NP)]
Length=269
Score = 47.8 bits (112), Expect = 1e-09
Identities = 56/239 (23%), Positives = 107/239 (45%), Gaps = 37/239 (15%)
Query 59 ERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQ---DIFDKILQNIS 115
+RF++ NQ A+TY + L+++P++MV F+ + ++ P+ + ++ + I N +
Sbjct 13 KRFSENKLNQVAGALTYSTMLAIVPLVMVIFS----IFSAFPVFNEVTGELKEMIFTNFA 68
Query 116 DPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQDQ 175
P+ + + I+ V + VG+ + + + N+ + + + RSP
Sbjct 69 -PSASDMVGEYIDQFVSNSKKMSAVGIVSLIAVALMLINNIDRTLNSIWHNSQSRSPLSS 127
Query 176 -EKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTWRLIGL 234
+W +I L LI+ +SI ++ + M + HL+ +GL
Sbjct 128 FAIYW---------MILTLGPLIIGVSI-GISSYIKIMFEQSEHLS-----------LGL 166
Query 235 AISIFANYLLFFWIFWRLPRHRPRKKALIR----GTFLAAIGFEVIKIVMTY---TLPS 286
+ F +L ++IF + P KK I+ G FLAAI F + K T+ T PS
Sbjct 167 KLLSFVPFLFTWFIFTLIYTVVPNKKVKIKHSAYGAFLAAIFFTLGKQAFTWYVVTFPS 225
>Q5QV33 UPF0761 membrane protein IL2447 [Idiomarina loihiensis
(strain ATCC BAA-735 / DSM 15497 / L2-TR)]
Length=284
Score = 46.2 bits (108), Expect = 4e-09
Identities = 48/226 (21%), Positives = 94/226 (42%), Gaps = 30/226 (13%)
Query 59 ERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQNISD-- 116
+RFN N +TY S LS++P+L+V F V ++ PM FD++ +N+
Sbjct 22 QRFNSDNTNITAGHLTYVSMLSLVPLLVVMFT----VFSAFPM-----FDELKENLEQAL 72
Query 117 -----PTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERS 171
PT L+ +N V + + +G+ I M + +A+ + RD
Sbjct 73 FANLLPTSGEQLEEYLNEFVTNASKMTAIGVGFLFIVAIMLMSAIDKALNSIWRD----- 127
Query 172 PQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTWRL 231
+ W+ + L+ L LI +G A + +L + E++
Sbjct 128 --SSSRHWLVSFAVYWMLLTLGPVLI-------GSGLAATSYLMSLSQFADEYVSGIQSF 178
Query 232 IGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIK 277
+ + I +++ F ++ +P + + + G +AA+ FE+ K
Sbjct 179 VLWFVPIVTSFVFFVLMYQLVPNRQVKFRYAAFGAVIAALLFELSK 224
>A5WD44 UPF0761 membrane protein PsycPRwf_0630 [Psychrobacter
sp. (strain PRwf-1)]
Length=538
Score = 42.7 bits (99), Expect = 9e-08
Identities = 47/216 (22%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query 66 GNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPML--LQDIFDKILQNISDPTLAATL 123
G Q A++TY + LS++PIL V +L+S P L +++ I+ + P +
Sbjct 31 GQQKAASLTYTTLLSIVPILTVLL----MILSSVPALESVREQISNIIYSNLLPQSGLQV 86
Query 124 KNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQDQEKFWVKYL 183
IN ++ + + +G + I + + A +W + +K +
Sbjct 87 SEYINNFAEKSSNLTAIGALALFVTTIMTLTTIERAF----NQIWR---VEDRSGGIKSI 139
Query 184 RDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTW-RLIGLAISIFANY 242
+ ++I L ++ T + S A + + + I+W W +++ A++I
Sbjct 140 VRYWTIITLGPLVLGTAFLVSSAVQSLSFLNQQVAGYGIDW--GFWVQVVSFAVTIAG-- 195
Query 243 LLFFWIFWRLPRHR-PRKKALIRGTFLAAIGFEVIK 277
F ++W +P+ + P K A I G F+ A+ FE++K
Sbjct 196 --FIGMYWFIPKAKVPLKNAAIAGVFV-AVTFELLK 228
Score = 18.9 bits (37), Expect = 2.8
Identities = 7/22 (32%), Positives = 11/22 (50%), Gaps = 0/22 (0%)
Query 224 WLKPTWRLIGLAISIFANYLLF 245
W+ +W LI L + I +F
Sbjct 257 WIYLSWNLILLGVEISYTLTIF 278
>Q8XZ47 UPF0761 membrane protein RSc1559 [Ralstonia nicotianae
(strain GMI1000)]
Length=441
Score = 37.0 bits (84), Expect = 5e-06
Identities = 62/238 (26%), Positives = 102/238 (43%), Gaps = 40/238 (17%)
Query 55 IRATERFNDRLGN-----QFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQ----- 104
+RA +R+ R Q ++T+ + LS++PIL V+FA + + PM
Sbjct 16 LRALQRYALRRAGEDSLPQVAGSLTFTTVLSLVPILTVAFA----LFTAFPMFQSFRAAI 71
Query 105 --DIFDKILQ-NISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIR 161
+F ++ NIS P L T N + + T GLVGL V + + M + A+
Sbjct 72 EGYLFSNLVPGNISRPIL--TYLNQFSHNAKGLTAAGLVGLVV---TSVMTMLTVENALN 126
Query 162 AQSRDVWERSPQDQE--KFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHL 219
A R V +R P Q FW +S +LI +++S V+ SA + L
Sbjct 127 AIWR-VRQRRPLAQRVLVFWA-----LVSFGPVLIGASLSVSSYLVSVSAGYVAKLPYGL 180
Query 220 NSIEWLKPTWRLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIK 277
+ L P L +A ++ ++ + WR A + G +AA+ FE+ K
Sbjct 181 GVVVGLVPI-LLSAIAFAMLYVFVPNTLVAWR--------DAFLAG-LVAAVAFEIAK 228
Score = 17.3 bits (33), Expect = 8.4
Identities = 10/27 (37%), Positives = 15/27 (56%), Gaps = 0/27 (0%)
Query 97 ASHPMLLQDIFDKILQNISDPTLAATL 123
A+ P+ L I+ L + T+AATL
Sbjct 249 AALPIFLLWIYVSWLVTLLGATIAATL 275
>C6AQL9 UPF0761 membrane protein NT05HA_1801 [Aggregatibacter
aphrophilus (strain NJ8700)]
Length=278
Score = 36.6 bits (83), Expect = 6e-06
Identities = 54/242 (22%), Positives = 101/242 (42%), Gaps = 43/242 (18%)
Query 59 ERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPM-------LLQDIFDKIL 111
+RFN Q +TY + L+++P++MV F+ + ++ P+ L + IF
Sbjct 13 QRFNQNKLTQAAGYLTYSTMLAIVPLIMVVFS----IFSAFPVFNEVTGALKEFIFTNFA 68
Query 112 QNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERS 171
+ SD + + +N + +Q + VG++ L V IN +I +W +
Sbjct 69 PSASD-VVGQYIDEFVNNS-KQMSAVGIISLIVVALMLIN-------SIDRTLNSIWHDT 119
Query 172 PQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTWRL 231
+ + ++ L++ L L TS+A SA + + N+ +
Sbjct 120 S-------TRPIFTSFAIYWLILTLGPLLVGTSIAASA---YVKTMFENASGF------S 163
Query 232 IGLAISIFANYLLFFWIFWRLPRHRPRKKALIR----GTFLAAIGFEVIKIVMTY---TL 284
GL + F +L ++IF + P KK I+ G +AA+ F + K + T
Sbjct 164 FGLKLLSFVPFLSTWFIFTVIYMVVPNKKVSIKHSAAGALIAAVFFTLGKQAFAWYIVTF 223
Query 285 PS 286
PS
Sbjct 224 PS 225
>Q9I507 UPF0761 membrane protein PA0951 [Pseudomonas aeruginosa
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 /
LMG 12228 / 1C / PRS 101 / PAO1)]
Length=411
Score = 35.4 bits (80), Expect = 2e-05
Identities = 57/214 (27%), Positives = 94/214 (44%), Gaps = 30/214 (14%)
Query 71 AAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQNI--SDPTLAATLKNTIN 128
AA+TY + +++P++ V F+ + A H M + I I +N S T +
Sbjct 29 AALTYTTLFAVVPMMTVMFSMLSLIPAFHGM-GESIQTFIFRNFVPSAGEAVETYLKSFT 87
Query 129 TAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE-RSPQDQEKFWVKYLRDFI 187
T + T VG+V LAV ++ + I ++W R P+ ++ Y +
Sbjct 88 TQARHLTWVGVVFLAVTAFT-------MLVTIEKAFNEIWRVRQPRRGVGRFLLYWA-IL 139
Query 188 SLIGLLI--ALIVTLSITSVAGSAQQMIISALH-LNSIEWLKPTWRLIGLAISIFANYLL 244
SL LL+ VT ITS +S LH +++ + L+ LA S+ A
Sbjct 140 SLGPLLLGAGFAVTTYITS---------LSLLHGPDALPGAETLLGLMPLAFSVAA---- 186
Query 245 FFWIFWRLPRHR-PRKKALIRGTFLAAIGFEVIK 277
F ++ +P R P + AL+ G F A + FE K
Sbjct 187 FTLLYSAVPNARVPVRHALMGGVFTAVL-FEAAK 219
Score = 19.2 bits (38), Expect = 2.1
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (6%)
Query 196 LIVTLSITSVAGSAQQM--IISALHLNSIEWLKP 227
LIV L + V QQ+ + HL+ WL P
Sbjct 280 LIVLLGVLRVFLQRQQLGQSLRLTHLHRAGWLLP 313
>B7UXY2 UPF0761 membrane protein PLES_43641 [Pseudomonas aeruginosa
(strain LESB58)]
Length=411
Score = 35.4 bits (80), Expect = 2e-05
Identities = 57/214 (27%), Positives = 94/214 (44%), Gaps = 30/214 (14%)
Query 71 AAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQNI--SDPTLAATLKNTIN 128
AA+TY + +++P++ V F+ + A H M + I I +N S T +
Sbjct 29 AALTYTTLFAVVPMMTVMFSMLSLIPAFHGM-GESIQTFIFRNFVPSAGEAVETYLKSFT 87
Query 129 TAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE-RSPQDQEKFWVKYLRDFI 187
T + T VG+V LAV ++ + I ++W R P+ ++ Y +
Sbjct 88 TQARHLTWVGVVFLAVTAFT-------MLVTIEKAFNEIWRVRQPRRGVGRFLLYWA-IL 139
Query 188 SLIGLLI--ALIVTLSITSVAGSAQQMIISALH-LNSIEWLKPTWRLIGLAISIFANYLL 244
SL LL+ VT ITS +S LH +++ + L+ LA S+ A
Sbjct 140 SLGPLLLGAGFAVTTYITS---------LSLLHGPDALPGAETLLGLMPLAFSVAA---- 186
Query 245 FFWIFWRLPRHR-PRKKALIRGTFLAAIGFEVIK 277
F ++ +P R P + AL+ G F A + FE K
Sbjct 187 FTLLYSAVPNARVPVRHALMGGVFTAVL-FEAAK 219
Score = 20.0 bits (40), Expect = 1.2
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (6%)
Query 196 LIVTLSITSVAGSAQQM--IISALHLNSIEWLKP 227
LIV L + V QQ+ + HL+ WL P
Sbjct 280 LIVLLGVLRVFHQRQQLGQSLRLTHLHRAGWLLP 313
>Q02IB2 UPF0761 membrane protein PA14_51960 [Pseudomonas aeruginosa
(strain UCBPP-PA14)]
Length=411
Score = 35.4 bits (80), Expect = 2e-05
Identities = 57/214 (27%), Positives = 94/214 (44%), Gaps = 30/214 (14%)
Query 71 AAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQNI--SDPTLAATLKNTIN 128
AA+TY + +++P++ V F+ + A H M + I I +N S T +
Sbjct 29 AALTYTTLFAVVPMMTVMFSMLSLIPAFHGM-GESIQTFIFRNFVPSAGEAVETYLKSFT 87
Query 129 TAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE-RSPQDQEKFWVKYLRDFI 187
T + T VG+V LAV ++ + I ++W R P+ ++ Y +
Sbjct 88 TQARHLTWVGVVFLAVTAFT-------MLVTIEKAFNEIWRVRQPRRGVGRFLLYWA-IL 139
Query 188 SLIGLLI--ALIVTLSITSVAGSAQQMIISALH-LNSIEWLKPTWRLIGLAISIFANYLL 244
SL LL+ VT ITS +S LH +++ + L+ LA S+ A
Sbjct 140 SLGPLLLGAGFAVTTYITS---------LSLLHGPDALPGAETLLGLMPLAFSVAA---- 186
Query 245 FFWIFWRLPRHR-PRKKALIRGTFLAAIGFEVIK 277
F ++ +P R P + AL+ G F A + FE K
Sbjct 187 FTLLYSAVPNARVPVRHALMGGVFTAVL-FEAAK 219
Score = 20.0 bits (40), Expect = 1.2
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (6%)
Query 196 LIVTLSITSVAGSAQQM--IISALHLNSIEWLKP 227
LIV L + V QQ+ + HL+ WL P
Sbjct 280 LIVLLGVLRVFHQRQQLGQSLRLTHLHRAGWLLP 313
>A6VA22 UPF0761 membrane protein PSPA7_4558 [Pseudomonas aeruginosa
(strain PA7)]
Length=411
Score = 35.0 bits (79), Expect = 2e-05
Identities = 57/214 (27%), Positives = 94/214 (44%), Gaps = 30/214 (14%)
Query 71 AAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQNI--SDPTLAATLKNTIN 128
AA+TY + +++P++ V F+ + A H M + I I +N S T +
Sbjct 29 AALTYTTLFAVVPMMTVMFSMLSLIPAFHGM-GESIQTFIFRNFVPSAGEAVETYLKSFT 87
Query 129 TAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE-RSPQDQEKFWVKYLRDFI 187
T + T VG+V LAV ++ + I ++W R P+ ++ Y +
Sbjct 88 TQARHLTWVGVVFLAVTAFT-------MLVTIEKAFNEIWRVRQPRRGVGRFLLYWA-IL 139
Query 188 SLIGLLI--ALIVTLSITSVAGSAQQMIISALH-LNSIEWLKPTWRLIGLAISIFANYLL 244
SL LL+ VT ITS +S LH +++ + L+ LA S+ A
Sbjct 140 SLGPLLLGAGFAVTTYITS---------LSLLHGPDALPGAETLLGLMPLAFSVAA---- 186
Query 245 FFWIFWRLPRHR-PRKKALIRGTFLAAIGFEVIK 277
F ++ +P R P + AL+ G F A + FE K
Sbjct 187 FTLLYSAVPNARVPVRHALMGGMFTAVL-FEAAK 219
Score = 18.9 bits (37), Expect = 2.7
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query 197 IVTLSITSVAGSAQQM--IISALHLNSIEWLKP 227
IV L + V QQ+ + +HL+ WL P
Sbjct 281 IVLLGVLRVFHQRQQLGQSMRLVHLHRAGWLLP 313
Lambda K H a alpha
0.326 0.138 0.417 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1241988
Database: 86444c6074d55600a81f8e73742bfb13.SwissProt.fasta
Posted date: May 20, 2024 1:31 PM
Number of letters in database: 4,926
Number of sequences in database: 14
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
