BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: f8fdb797d2f84461a1f96fefd65f5474.SwissProt.fasta
7 sequences; 2,901 total letters
Query= Z4480
Length=524
Score E
Sequences producing significant alignments: (Bits) Value
P39829 Galactarate dehydratase (L-threo-forming) [Escherichia col... 1044 0.0
P42240 Probable galactarate dehydratase (L-threo-forming) [Bacill... 706 0.0
O34673 Altronate dehydratase [Bacillus subtilis (strain 168)] 247 3e-79
P42604 Altronate dehydratase [Escherichia coli (strain K12)] 207 3e-64
Q1QWP0 (2R)-sulfolactate sulfo-lyase subunit beta [Chromohalobact... 149 7e-44
Q58Y43 (2R)-sulfolactate sulfo-lyase subunit beta [Paracoccus pan... 130 5e-37
Q1QWP1 (2R)-sulfolactate sulfo-lyase subunit alpha [Chromohalobac... 38.9 2e-07
>P39829 Galactarate dehydratase (L-threo-forming) [Escherichia
coli (strain K12)]
Length=523
Score = 1044 bits (2699), Expect = 0.0
Identities = 520/523 (99%), Positives = 522/523 (99%), Gaps = 0/523 (0%)
Query 1 MANIEIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALLDI 60
MANIEIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALLDI
Sbjct 1 MANIEIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALLDI 60
Query 61 PANGEIIRYGEVIGYAVRAIPRGSWIDESMVVLPKAPPLHTLPLATKVPEPLPPLEGYTF 120
PANGEIIRYGEVIGYAVRAIPRGSWIDESMVVLP+APPLHTLPLATKVPEPLPPLEGYTF
Sbjct 61 PANGEIIRYGEVIGYAVRAIPRGSWIDESMVVLPEAPPLHTLPLATKVPEPLPPLEGYTF 120
Query 121 EGYRNADGSVGTKNLLGIPTSVHCVAGVVDYVVKIIERDLLPKYPNVDGVVGLNHLYGCG 180
EGYRNADGSVGTKNLLGI TSVHCVAGVVDYVVKIIERDLLPKYPNVDGVVGLNHLYGCG
Sbjct 121 EGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDLLPKYPNVDGVVGLNHLYGCG 180
Query 181 VAINAPAAVVPIRTIHNISLNPNFGGEVMVIGLGCEKLQPERLLTGTDDVQAIPVESASI 240
VAINAPAAVVPIRTIHNISLNPNFGGEVMVIGLGCEKLQPERLLTGTDDVQAIPVESASI
Sbjct 181 VAINAPAAVVPIRTIHNISLNPNFGGEVMVIGLGCEKLQPERLLTGTDDVQAIPVESASI 240
Query 241 VSLQDEKHVGFQSMVEDILQVAERHLQKLNQRQRETCPASELVVGMQCGGSDAFSGVTAN 300
VSLQDEKHVGFQSMVEDILQ+AERHLQKLNQRQRETCPASELVVGMQCGGSDAFSGVTAN
Sbjct 241 VSLQDEKHVGFQSMVEDILQIAERHLQKLNQRQRETCPASELVVGMQCGGSDAFSGVTAN 300
Query 301 PAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAVNEEVGKRLLEEMEWYDNYLNMGK 360
PAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAVNEEVGKRLLEEMEWYDNYLNMGK
Sbjct 301 PAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAVNEEVGKRLLEEMEWYDNYLNMGK 360
Query 361 TDRSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDF 420
TDRSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDF
Sbjct 361 TDRSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDF 420
Query 421 VCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWFDLMDINAGTIATGEE 480
VCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWFDLMDINAGTIATGEE
Sbjct 421 VCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWFDLMDINAGTIATGEE 480
Query 481 TIEEVGWKLFHFILDVASGKKKTFSDQWGLHNQLAVFNPAPVT 523
TIEEVGWKLFHFILDVASGKKKTFSDQWGLHNQLAVFNPAPVT
Sbjct 481 TIEEVGWKLFHFILDVASGKKKTFSDQWGLHNQLAVFNPAPVT 523
>P42240 Probable galactarate dehydratase (L-threo-forming) [Bacillus
subtilis (strain 168)]
Length=510
Score = 706 bits (1821), Expect = 0.0
Identities = 347/509 (68%), Positives = 413/509 (81%), Gaps = 11/509 (2%)
Query 15 YIKVHDTDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALLDIPANGEIIRYGEVIG 74
YIKVH+ DN AIIVND GL GT F GL L E +PQGHKVAL D+ EI+RYGEVIG
Sbjct 13 YIKVHEIDNTAIIVNDGGLPKGTVFSCGLVLEEDVPQGHKVALTDLNQGDEIVRYGEVIG 72
Query 75 YAVRAIPRGSWIDESMVVLPKAPPLHTLPLATKVPEPLPPLEGYTFEGYRNADGSVGTKN 134
+A I RGSWI E++V +P P L LPLA +VP+P PPLEGYTFEGYRNADGS GTKN
Sbjct 73 FADETIKRGSWIREALVRMPAPPALDDLPLANRVPQPRPPLEGYTFEGYRNADGSAGTKN 132
Query 135 LLGIPTSVHCVAGVVDYVVKIIERDLLPKYPNVDGVVGLNHLYGCGVAINAPAAVVPIRT 194
+LGI TSV CV GV+DY VK I+ +LLPKYPNVD VV L+H YGCGVAINAP AV+PIRT
Sbjct 133 ILGITTSVQCVVGVLDYAVKRIKEELLPKYPNVDDVVPLHHQYGCGVAINAPDAVIPIRT 192
Query 195 IHNISLNPNFGGEVMVIGLGCEKLQPERLLTGTDDVQAIPVESASIVSLQDEKHVGFQSM 254
I N++ +PNFGGEVMVIGLGCEKL PER+ + DD I+SLQD H GF +M
Sbjct 193 IQNLAKHPNFGGEVMVIGLGCEKLLPERIASENDD---------DILSLQD--HRGFAAM 241
Query 255 VEDILQVAERHLQKLNQRQRETCPASELVVGMQCGGSDAFSGVTANPAVGYASDLLVRCG 314
++ IL++AE L +LN R R +CP S+LV+G+QCGGSDAFSGVTANPAVGYA+DLLVR G
Sbjct 242 IQSILEMAEERLIRLNSRTRVSCPVSDLVIGLQCGGSDAFSGVTANPAVGYAADLLVRAG 301
Query 315 ATVMFSEVTEVRDAIHLLTPRAVNEEVGKRLLEEMEWYDNYLNMGKTDRSANPSPGNKKG 374
ATV+FSEVTEVRDAIHLLTPRAV+EEVG+ L++EM+WYD+YL G DRSANPSPGNKKG
Sbjct 302 ATVLFSEVTEVRDAIHLLTPRAVSEEVGQSLIKEMKWYDSYLRRGDADRSANPSPGNKKG 361
Query 375 GLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDFVCGTQQVASGITVQ 434
GL+NVVEKALGS+AKSG S I VL PG+R ++GL++AATPASDFVCGT Q+A+G+ +Q
Sbjct 362 GLSNVVEKALGSVAKSGTSPISGVLGPGERAKQKGLLFAATPASDFVCGTLQLAAGMNLQ 421
Query 435 VFTTGRGTPYGLMAVPVIKMATRTELANRWFDLMDINAGTIATGEETIEEVGWKLFHFIL 494
VFTTGRGTPYGL A PV+K++TR L+ W DL+DINAG IATGE +IE+VGW++F IL
Sbjct 422 VFTTGRGTPYGLAAAPVLKVSTRHSLSEHWADLIDINAGRIATGEASIEDVGWEIFRTIL 481
Query 495 DVASGKKKTFSDQWGLHNQLAVFNPAPVT 523
DVASG+K+T++D+WGLHN L +FNPAPVT
Sbjct 482 DVASGRKQTWADRWGLHNDLCLFNPAPVT 510
>O34673 Altronate dehydratase [Bacillus subtilis (strain 168)]
Length=497
Score = 247 bits (630), Expect = 3e-79
Identities = 167/492 (34%), Positives = 261/492 (53%), Gaps = 25/492 (5%)
Query 15 YIKVHDTDNVAIIVNDNGLKAGTR---FPDGLELIEHIPQGHKVALLDIPANGEIIRYGE 71
+IK+H DNV + + D ++ G R + +E+ + I +GHK+AL I N I++YG
Sbjct 4 FIKIHKQDNVLLALRD--IQKGERLHAYGVSIEVKDDIKRGHKIALQSIKENDSIVKYGF 61
Query 72 VIGYAVRAIPRGSWIDESMVVLPKAPPLHTLPLATKVP---EPLPPLEGYTFEGYRNADG 128
IG+A + I G E + V L + L + P E E TF+G+R +G
Sbjct 62 PIGHASQDISIG----EHIHVHNTKTNLSDIQLYSYTPRFDENPYSNENRTFKGFRRENG 117
Query 129 SVGTKNLLGIPTSVHCVAGVVDYVVKIIERDLLPKYPNVDGVVGLNHLYGCGVAINAPAA 188
G +N L I +V CV G+ + +++ R+ P D V+ L H YGC +
Sbjct 118 DAGVRNELWIVPTVGCVNGIAEKMLQRFVRETGDIAP-FDNVLVLKHQYGCSQLGDDHEN 176
Query 189 VVPIRTIHNISLNPNFGGEVMVIGLGCEKLQPERLLTGTDDVQAIPVESASIVSLQDEKH 248
I + N +PN GG V+V+GLGCE + R+ DV V+ S+ DE
Sbjct 177 TKQI--LLNAIRHPNAGG-VLVLGLGCENNELARMKEALQDVNLKRVKFLESQSVTDEME 233
Query 249 VGFQSMVEDILQVAERHLQKLNQRQRETCPASELVVGMQCGGSDAFSGVTANPAVGYASD 308
G +++++I + A+ +RE P SEL +G++CGGSD FSG+TANP +G SD
Sbjct 234 AGV-ALLKEIHEAAKGD-------KREDIPLSELKIGLKCGGSDGFSGITANPLLGRFSD 285
Query 309 LLVRCGATVMFSEVTEVRDAIHLLTPRAVNEEVGKRLLEEMEWYDNYLNMGKTDRSANPS 368
L+ G + + +EV E+ A +L RA NEEV ++++ + + Y NPS
Sbjct 286 YLIAQGGSTVLTEVPEMFGAETILMQRAANEEVFHKIVDLINDFKQYFIKHDQPVYENPS 345
Query 369 PGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDFVCGTQQVA 428
PGNK GG++ + +K+LG K+G S + +VL G+ +GL + P +D + + A
Sbjct 346 PGNKAGGISTLEDKSLGCTQKAGISPVTDVLKYGEVLKTKGLTLLSAPGNDLIASSALAA 405
Query 429 SGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWFDLMDINAGTIATGEETIEEVGWK 488
+G + +FTTGRGTP+G VP +K+AT TEL +D NAG +A + E V +
Sbjct 406 AGCQIVLFTTGRGTPFGTF-VPTVKVATNTELYEAKPHWIDFNAGLLAEDDVHEEYVLRE 464
Query 489 LFHFILDVASGK 500
H++++VASG+
Sbjct 465 FIHYMIEVASGQ 476
Score = 21.6 bits (44), Expect = 0.39
Identities = 22/76 (29%), Positives = 33/76 (43%), Gaps = 14/76 (18%)
Query 456 TRTELANRWFDLMDINAG-TIAT------GEETI---EEVGWKLFHFILDVASGKKKTFS 505
T L R+ D + G T+ T G ETI ++FH I+D+ + K+ F
Sbjct 275 TANPLLGRFSDYLIAQGGSTVLTEVPEMFGAETILMQRAANEEVFHKIVDLINDFKQYFI 334
Query 506 DQWGLHNQLAVFNPAP 521
H+Q NP+P
Sbjct 335 K----HDQPVYENPSP 346
>P42604 Altronate dehydratase [Escherichia coli (strain K12)]
Length=495
Score = 207 bits (527), Expect = 3e-64
Identities = 157/496 (32%), Positives = 239/496 (48%), Gaps = 32/496 (6%)
Query 15 YIKVHDTDNVAIIVNDNGLKAGTRFP---DGLELIEHIPQGHKVALLDIPANGEIIRYGE 71
YIK+H DNVA+ + D L GT + L + + +GHK AL DI +I+YG
Sbjct 3 YIKIHALDNVAVALAD--LAEGTEVSVDNQTVTLRQDVARGHKFALTDIAKGANVIKYGL 60
Query 72 VIGYAVRAIPRGSWID--ESMVVLPKAPPLHTLPLATKVPEPLPPLEGYTFEGYRNADGS 129
IGYA+ I G + + L P +P E + YR A+G
Sbjct 61 PIGYALADIAAGVHVHAHNTRTNLSDLDQYRYQPDFQDLPAQAADRE---VQIYRRANGD 117
Query 130 VGTKNLLGIPTSVHCVAGVVDYVVKIIERDLLPKYPNVDGVVGL---NHLYGCGVAINAP 186
VG +N L I +V CV G+ + I+ L + N +G G+ +H YGC +
Sbjct 118 VGVRNELWILPTVGCVNGIA----RQIQNRFLKETNNAEGTDGVFLFSHTYGCSQLGDDH 173
Query 187 AAVVPIRT-IHNISLNPNFGGEVMVIGLGCEKLQPERLLTGTDDVQAIPVESASIVSLQD 245
+ RT + N+ +PN G V+VIGLGCE Q D+ V D
Sbjct 174 ---INTRTMLQNMVRHPN-AGAVLVIGLGCENNQVAAFRETLGDIDPERVHFMICQQQDD 229
Query 246 EKHVGFQSMVEDILQVAERHLQKLNQRQRETCPASELVVGMQCGGSDAFSGVTANPAVGY 305
E G + + + + +RE SEL G++CGGSD SG+TANP +G
Sbjct 230 EIEAGIEHL--------HQLYNVMRNDKREPGKLSELKFGLECGGSDGLSGITANPMLGR 281
Query 306 ASDLLVRCGATVMFSEVTEVRDAIHLLTPRAVNEEVGKRLLEEMEWYDNYLNMGKTDRSA 365
SD ++ G T + +EV E+ A LL +E ++L+ + + Y
Sbjct 282 FSDYVIANGGTTVLTEVPEMFGAEQLLMDHCRDEATFEKLVTMVNDFKQYFIAHDQPIYE 341
Query 366 NPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDFVCGTQ 425
NPSPGNK GG+ + +K+LG K+G S +V+VL G+R GL + P +D V +
Sbjct 342 NPSPGNKAGGITTLEDKSLGCTQKAGSSVVVDVLRYGERLKTPGLNLLSAPGNDAVATSA 401
Query 426 QVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWFDLMDINAGTIATGEETIEEV 485
+G + +F+TGRGTPYG VP +K+AT +ELA + +D +AG + G + + ++
Sbjct 402 LAGAGCHMVLFSTGRGTPYGGF-VPTVKIATNSELAAKKKHWIDFDAGQLIHG-KAMPQL 459
Query 486 GWKLFHFILDVASGKK 501
+ I++ A+GK+
Sbjct 460 LEEFIDTIVEFANGKQ 475
>Q1QWP0 (2R)-sulfolactate sulfo-lyase subunit beta [Chromohalobacter
salexigens (strain ATCC BAA-138 / DSM 3043 / CIP 106854
/ NCIMB 13768 / 1H11)]
Length=389
Score = 149 bits (377), Expect = 7e-44
Identities = 119/394 (30%), Positives = 181/394 (46%), Gaps = 36/394 (9%)
Query 115 LEGYTFEGYRNADGSVGTKNLLGIPTSVHCVAGVVDYVVKIIERDLLPKYPNVDGVVGLN 174
L+G TF GYR +G VG +N H + VD + + N+ G + L
Sbjct 3 LKGRTFLGYRRDNGRVGIRN--------HVIVLPVDDISNAAAEAVAN---NIKGTLALP 51
Query 175 HLYG---CGVAINAPAAVVPIRTIHNISLNPNFGGEVMVIGLGCEKLQPERLLTGTDDVQ 231
H YG G ++ + RT+ NPN V+VIG+ +P D ++
Sbjct 52 HPYGRLQFGADLD-----LHFRTLIGTGCNPNVAA-VIVIGI-----EPGWTGKVVDGIR 100
Query 232 AI--PVESASIVSLQDEKHVGFQSMVEDILQVAERHLQKLNQRQRETCPASELVVGMQCG 289
A PVE I + G + + + + A +Q ++ QRE C SEL V +CG
Sbjct 101 ATGKPVEGFWI------EQNGDHNTIANASRKAREFVQYASELQREPCDVSELWVSTKCG 154
Query 290 GSDAFSGVTANPAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAVNEEVGKRLLEEM 349
SD SG ANP VG A D L G T++F E +E+ HL+ R N++V +R
Sbjct 155 ESDTTSGCGANPTVGEAFDKLYEQGCTLVFGETSELTGGEHLVAARCANDDVRERFQAMF 214
Query 350 EWYDNYLNMGKTD--RSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVE-VLSPGQRPT 406
+ Y ++ KT + P+ GN +GGL + EKALG+I K GK V+ VL + PT
Sbjct 215 DRYSAMIDRHKTSDLSESQPTKGNIEGGLTTIEEKALGNIQKIGKRCRVDGVLDKAETPT 274
Query 407 KRGLIYAATPASDFVCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWFD 466
GL + + ++ T ASG F TG+G G +PVIK+ +
Sbjct 275 GPGLWFMDSSSAAAEMVTLCAASGYVAHFFPTGQGNVIGNPILPVIKLCANPRTVRTMSE 334
Query 467 LMDINAGTIATGEETIEEVGWKLFHFILDVASGK 500
+D++ + E ++E G +L +L A+G+
Sbjct 335 HIDVDVSGVLRREINLQEAGDQLLEMLLRTANGR 368
>Q58Y43 (2R)-sulfolactate sulfo-lyase subunit beta [Paracoccus
pantotrophus]
Length=393
Score = 130 bits (328), Expect = 5e-37
Identities = 112/395 (28%), Positives = 179/395 (45%), Gaps = 44/395 (11%)
Query 119 TFEGYRNADGSVGTKNLLGIPTSVHCVAGVVDYVVKIIERDLLPKYPNVDGVVGLNHLYG 178
T + +R +G VG +N H + VD + + NV G + + H YG
Sbjct 9 TVKAWRRENGRVGVRN--------HVLILPVDDISNAACEAVAN---NVKGTLAIPHAYG 57
Query 179 ---CGVAINAPAAVVPIRTIHNISLNPNFGGEVMVIGLGCEKLQPERLLTGTDDVQAI-- 233
G + + RTI NPN V+VIG+ +PE D +
Sbjct 58 RLQFGEDLE-----LHFRTIIGTGANPNVAA-VVVIGI-----EPEWTQVIVDGIAKTGK 106
Query 234 PVESASIVSLQDEKHVGFQSMVEDILQV---AERHLQKLNQRQRETCPASELVVGMQCGG 290
PV SI D E I Q A+ ++ ++ Q+E CP S+L + +CG
Sbjct 107 PVTGFSIEQKGD---------FETIRQAGWKAKEYVHWASELQKEDCPISDLWISTKCGE 157
Query 291 SDAFSGVTANPAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAVNEEVGKRLLEEME 350
SD +G+++ P VG D L+ G F E +E+ A H+ RA N E ++ E +
Sbjct 158 SDTTTGLSSCPTVGNMYDKLLPQGIYGCFGETSEITGAEHICEKRAANPETARKFKEIWQ 217
Query 351 WY-DNYLNMGKTD--RSANPSPGNKKGGLANVVEKALGSIAKSGK-SAIVEVLSPGQRPT 406
Y D+ + +TD + P+ GN GGL + EKALG++ K G+ S ++ + P + P+
Sbjct 218 AYSDDVIFAHQTDDLSDSQPTKGNILGGLTTIEEKALGNLEKIGRTSTYIDAMGPAETPS 277
Query 407 K-RGLIYAATPASDFVCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWF 465
K GL + + ++ C T A G + F TG+G G VPVIK++
Sbjct 278 KGPGLYFMDSSSAAAECVTLMAAGGYVIHTFPTGQGNVVGNPIVPVIKISGNPRTLRTMS 337
Query 466 DLMDINAGTIATGEETIEEVGWKLFHFILDVASGK 500
+ +D++ + T E TI++ G L I+ A+G+
Sbjct 338 EHIDVDVTGVLTREMTIDQAGDALIEMIIRTANGR 372
>Q1QWP1 (2R)-sulfolactate sulfo-lyase subunit alpha [Chromohalobacter
salexigens (strain ATCC BAA-138 / DSM 3043 / CIP 106854
/ NCIMB 13768 / 1H11)]
Length=94
Score = 38.9 bits (89), Expect = 2e-07
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 9/78 (12%)
Query 18 VHDTDNVAIIVNDNGLKAGTRFPDGL---------ELIEHIPQGHKVALLDIPANGEIIR 68
VHD D+ +V G++AG + E+ + IP GHK+A+ D+ + +I+
Sbjct 7 VHDADDAVGVVVVEGVEAGQMLTGWVMDQDRTLQFEVKDAIPIGHKLAIRDLAEDETVIK 66
Query 69 YGEVIGYAVRAIPRGSWI 86
Y IG V++I +G +
Sbjct 67 YSVDIGRVVQSIRQGEHV 84
Lambda K H a alpha
0.319 0.137 0.407 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1226844
Database: f8fdb797d2f84461a1f96fefd65f5474.SwissProt.fasta
Posted date: May 20, 2024 8:48 AM
Number of letters in database: 2,901
Number of sequences in database: 7
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40