BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 0967e023c3f0635cdd105edd574bc3d2.SwissProt.fasta
15 sequences; 5,078 total letters
Query= Z4155
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
P03024 HTH-type transcriptional regulator GalR [Escherichia coli ... 675 0.0
P0CL11 HTH-type transcriptional regulator GalR [Salmonella typhim... 617 0.0
E1WAQ4 HTH-type transcriptional regulator GalR [Salmonella typhim... 617 0.0
P41030 HTH-type transcriptional regulator GalS [Salmonella typhim... 353 4e-125
P25748 HTH-type transcriptional regulator GalS [Escherichia coli ... 350 8e-124
P31766 HTH-type transcriptional regulator GalR [Haemophilus influ... 340 8e-120
P24242 HTH-type transcriptional regulator AscG [Escherichia coli ... 189 7e-61
A6VNL0 HTH-type transcriptional repressor PurR [Actinobacillus su... 177 2e-56
B4EWM9 HTH-type transcriptional repressor PurR [Proteus mirabilis... 177 2e-56
Q6LQB9 HTH-type transcriptional repressor PurR [Photobacterium pr... 177 2e-56
B6EH86 HTH-type transcriptional repressor PurR [Aliivibrio salmon... 175 1e-55
P0ACN7 HTH-type transcriptional repressor CytR [Escherichia coli ... 172 2e-54
P0ACP7 HTH-type transcriptional repressor PurR [Escherichia coli ... 167 1e-52
P37947 HTH-type transcriptional regulator DegA [Bacillus subtilis... 166 4e-52
P25144 Catabolite control protein A [Bacillus subtilis (strain 168)] 163 5e-51
>P03024 HTH-type transcriptional regulator GalR [Escherichia coli
(strain K12)]
Length=343
Score = 675 bits (1741), Expect = 0.0
Identities = 342/343 (99%), Positives = 343/343 (100%), Gaps = 0/343 (0%)
Query 1 MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTE 60
MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTE
Sbjct 1 MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTE 60
Query 61 TVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV 120
TVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV
Sbjct 61 TVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV 120
Query 121 VHAKMIPDADLASLLKQMPGMVLINRILPGFENRCIALDDRYGAWLATRHLIQQGHTRIG 180
VHAKMIPDADLASL+KQMPGMVLINRILPGFENRCIALDDRYGAWLATRHLIQQGHTRIG
Sbjct 121 VHAKMIPDADLASLMKQMPGMVLINRILPGFENRCIALDDRYGAWLATRHLIQQGHTRIG 180
Query 181 YLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGRNFTA 240
YLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGRNFTA
Sbjct 181 YLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGRNFTA 240
Query 241 VACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQAA 300
VACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQAA
Sbjct 241 VACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQAA 300
Query 301 ELALALADNRPLPEITNVFSPTLVRRHSVSTPSLEASHHATSD 343
ELALALADNRPLPEITNVFSPTLVRRHSVSTPSLEASHHATSD
Sbjct 301 ELALALADNRPLPEITNVFSPTLVRRHSVSTPSLEASHHATSD 343
>P0CL11 HTH-type transcriptional regulator GalR [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=342
Score = 617 bits (1591), Expect = 0.0
Identities = 311/343 (91%), Positives = 329/343 (96%), Gaps = 1/343 (0%)
Query 1 MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTE 60
MATIKDVARLAGVSVATVSRVIN+SPKASEASRLAV SAMESLSYHPNANARALAQQ TE
Sbjct 1 MATIKDVARLAGVSVATVSRVINDSPKASEASRLAVTSAMESLSYHPNANARALAQQATE 60
Query 61 TVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV 120
T+GLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV
Sbjct 61 TLGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV 120
Query 121 VHAKMIPDADLASLLKQMPGMVLINRILPGFENRCIALDDRYGAWLATRHLIQQGHTRIG 180
VHAKMIPDADLASL+KQ+PGMVLINRILPG E+RC+ALDDRYGAWLATRHLIQQGHTRIG
Sbjct 121 VHAKMIPDADLASLMKQIPGMVLINRILPGLEHRCVALDDRYGAWLATRHLIQQGHTRIG 180
Query 181 YLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGRNFTA 240
Y+CSNH+ISDAEDRL+GYYDALAES I ANDRLVTFGEPDESGGEQAMTELLGRGRNFTA
Sbjct 181 YICSNHTISDAEDRLRGYYDALAESHIPANDRLVTFGEPDESGGEQAMTELLGRGRNFTA 240
Query 241 VACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQAA 300
VACYNDSMAAGAMGVLNDNG+ VPGE+SLIGFDDVLVSRYVRPRLTT+RYPIVTMATQAA
Sbjct 241 VACYNDSMAAGAMGVLNDNGVGVPGEVSLIGFDDVLVSRYVRPRLTTIRYPIVTMATQAA 300
Query 301 ELALALADNRPLPEITNVFSPTLVRRHSVSTPSLEASHHATSD 343
ELALALA P PE+T+VFSPTLVRRHSVSTP+ + H +T+D
Sbjct 301 ELALALAGKCPTPEVTHVFSPTLVRRHSVSTPT-DTGHLSTTD 342
>E1WAQ4 HTH-type transcriptional regulator GalR [Salmonella typhimurium
(strain SL1344)]
Length=342
Score = 617 bits (1591), Expect = 0.0
Identities = 311/343 (91%), Positives = 329/343 (96%), Gaps = 1/343 (0%)
Query 1 MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTE 60
MATIKDVARLAGVSVATVSRVIN+SPKASEASRLAV SAMESLSYHPNANARALAQQ TE
Sbjct 1 MATIKDVARLAGVSVATVSRVINDSPKASEASRLAVTSAMESLSYHPNANARALAQQATE 60
Query 61 TVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV 120
T+GLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV
Sbjct 61 TLGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV 120
Query 121 VHAKMIPDADLASLLKQMPGMVLINRILPGFENRCIALDDRYGAWLATRHLIQQGHTRIG 180
VHAKMIPDADLASL+KQ+PGMVLINRILPG E+RC+ALDDRYGAWLATRHLIQQGHTRIG
Sbjct 121 VHAKMIPDADLASLMKQIPGMVLINRILPGLEHRCVALDDRYGAWLATRHLIQQGHTRIG 180
Query 181 YLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGRNFTA 240
Y+CSNH+ISDAEDRL+GYYDALAES I ANDRLVTFGEPDESGGEQAMTELLGRGRNFTA
Sbjct 181 YICSNHTISDAEDRLRGYYDALAESHIPANDRLVTFGEPDESGGEQAMTELLGRGRNFTA 240
Query 241 VACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQAA 300
VACYNDSMAAGAMGVLNDNG+ VPGE+SLIGFDDVLVSRYVRPRLTT+RYPIVTMATQAA
Sbjct 241 VACYNDSMAAGAMGVLNDNGVGVPGEVSLIGFDDVLVSRYVRPRLTTIRYPIVTMATQAA 300
Query 301 ELALALADNRPLPEITNVFSPTLVRRHSVSTPSLEASHHATSD 343
ELALALA P PE+T+VFSPTLVRRHSVSTP+ + H +T+D
Sbjct 301 ELALALAGKCPTPEVTHVFSPTLVRRHSVSTPT-DTGHLSTTD 342
>P41030 HTH-type transcriptional regulator GalS [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=340
Score = 353 bits (907), Expect = 4e-125
Identities = 187/330 (57%), Positives = 233/330 (71%), Gaps = 0/330 (0%)
Query 1 MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTE 60
M TI+DVAR AGVSVATVSRV+NNS S +R AV A+ L Y PNANA+ALA Q ++
Sbjct 1 MITIRDVARQAGVSVATVSRVLNNSALVSPDTRDAVMQAVTLLGYRPNANAQALATQVSD 60
Query 61 TVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV 120
T+G+VV DVSD FFGA+VKAV+ VA ++LIGN YH +KER AIE LIR RC AL+
Sbjct 61 TIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIGNSYHEAEKERHAIEVLIRQRCNALI 120
Query 121 VHAKMIPDADLASLLKQMPGMVLINRILPGFENRCIALDDRYGAWLATRHLIQQGHTRIG 180
VH+K + D +L+ + Q+PGMVLINRI+PG+ +RC+ LD+ GA +ATR L+ GH RIG
Sbjct 121 VHSKALTDRELSDFMDQIPGMVLINRIVPGYAHRCVCLDNVSGARMATRMLLNNGHQRIG 180
Query 181 YLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGRNFTA 240
YL S+H I D R +G+ AL E GIAA++ + G PD GGE AM ELLGR TA
Sbjct 181 YLASSHRIEDDAMRREGWLHALQEQGIAASESWIGTGTPDMQGGESAMVELLGRNLQLTA 240
Query 241 VACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQAA 300
V YND+MAAGA+ L DNGI +P +S+IGFDD+ ++RY P+LTTVRYPI +MA A
Sbjct 241 VFAYNDNMAAGALTALKDNGIAIPLHLSVIGFDDIPIARYTDPQLTTVRYPIASMAKIAT 300
Query 301 ELALALADNRPLPEITNVFSPTLVRRHSVS 330
ELAL A T+ F PTLVRRHSV+
Sbjct 301 ELALQGAAGTLDITATHCFMPTLVRRHSVA 330
>P25748 HTH-type transcriptional regulator GalS [Escherichia coli
(strain K12)]
Length=346
Score = 350 bits (899), Expect = 8e-124
Identities = 184/331 (56%), Positives = 229/331 (69%), Gaps = 0/331 (0%)
Query 1 MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTE 60
M TI+DVAR AGVSVATVSRV+NNS S +R AV A+ L Y PNANA+ALA Q ++
Sbjct 1 MITIRDVARQAGVSVATVSRVLNNSTLVSADTREAVMKAVSELDYRPNANAQALATQVSD 60
Query 61 TVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV 120
T+G+VV DVSD FFGA+VKAV+ VA ++LIGN YH +KER AIE LIR RC AL+
Sbjct 61 TIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIGNSYHEAEKERHAIEVLIRQRCNALI 120
Query 121 VHAKMIPDADLASLLKQMPGMVLINRILPGFENRCIALDDRYGAWLATRHLIQQGHTRIG 180
VH+K + D +LA + +PGMVLINR++PG+ +RC+ LD+ GA +ATR L+ GH RIG
Sbjct 121 VHSKALSDDELAQFMDNIPGMVLINRVVPGYAHRCVCLDNLSGARMATRMLLNNGHQRIG 180
Query 181 YLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGRNFTA 240
YL S+H I D R G+ AL E I + + G PD GGE AM ELLGR TA
Sbjct 181 YLSSSHGIEDDAMRKAGWMSALKEQDIIPPESWIGAGTPDMPGGEAAMVELLGRNLQLTA 240
Query 241 VACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQAA 300
V YND+MAAGA+ L DNGI +P +S+IGFDD+ ++RY P+LTTVRYPI +MA A
Sbjct 241 VFAYNDNMAAGALTALKDNGIAIPLHLSIIGFDDIPIARYTDPQLTTVRYPIASMAKLAT 300
Query 301 ELALALADNRPLPEITNVFSPTLVRRHSVST 331
ELAL A P ++ F PTLVRRHSV+T
Sbjct 301 ELALQGAAGNIDPRASHCFMPTLVRRHSVAT 331
>P31766 HTH-type transcriptional regulator GalR [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=332
Score = 340 bits (871), Expect = 8e-120
Identities = 172/331 (52%), Positives = 237/331 (72%), Gaps = 0/331 (0%)
Query 1 MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTE 60
M+TI+DVA+LA VSVATVSRV+N+S SE +RL V A+ L+Y PNANA+ALA Q T+
Sbjct 1 MSTIRDVAKLANVSVATVSRVLNHSLSVSENTRLVVEQAIAQLAYQPNANAQALAVQNTD 60
Query 61 TVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV 120
T+G+VV DV+D FF +VKAV++VA +LIG GYH+ +KER+AI L+R RC++LV
Sbjct 61 TIGVVVTDVTDAFFAILVKAVDKVAEAHQKTILIGIGYHHAEKEREAINTLLRKRCSSLV 120
Query 121 VHAKMIPDADLASLLKQMPGMVLINRILPGFENRCIALDDRYGAWLATRHLIQQGHTRIG 180
VH+K + D +L+ L + GMV+INR++ G+E+RC++LD++ G +LAT LI+ GH I
Sbjct 121 VHSKALSDDELSHYLNTVQGMVIINRVIKGYEHRCVSLDNQKGTYLATEMLIRYGHQHIA 180
Query 181 YLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGRNFTA 240
Y+ SNH+I D +R GY AL + ++ +T PD GGE+AM +LL +N TA
Sbjct 181 YIGSNHAIFDEVERRNGYLAALKDHNYPIIEQAITLNSPDFEGGEKAMIDLLSYNKNLTA 240
Query 241 VACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQAA 300
V YNDSMAAGA+ VLN+N I VP + S+IGFDD+ ++RY+ P+LTT+RYPI MAT AA
Sbjct 241 VVAYNDSMAAGAISVLNENNISVPSQFSIIGFDDMPIARYLIPKLTTIRYPIDLMATYAA 300
Query 301 ELALALADNRPLPEITNVFSPTLVRRHSVST 331
+LAL+L D + + F+PTLVRR SV +
Sbjct 301 KLALSLTDEKIITPPVVQFNPTLVRRFSVES 331
>P24242 HTH-type transcriptional regulator AscG [Escherichia coli
(strain K12)]
Length=336
Score = 189 bits (480), Expect = 7e-61
Identities = 114/337 (34%), Positives = 189/337 (56%), Gaps = 6/337 (2%)
Query 1 MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTE 60
M T+ +VA+ AGVS ATVSRV++ + S+ ++ V A+E Y PN AR L+ ++T+
Sbjct 1 MTTMLEVAKRAGVSKATVSRVLSGNGYVSQETKDRVFQAVEESGYRPNLLARNLSAKSTQ 60
Query 61 TVGLVVGDV--SDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAA 118
T+GLVV + +F ++ ++A G LL+ +G H+ ++ERQAI+ L+ RC A
Sbjct 61 TLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCDA 120
Query 119 LVVHAKMIPDADLASLLK--QMPGMVLINRILPGFENRCIALDDRYGAWLATRHLIQQGH 176
++++ + + ++ ++ P MVL NR L + + D + ++ A LI GH
Sbjct 121 IMIYPRFLSVDEIDDIIDAHSQPIMVL-NRRLRKNSSHSVWCDHKQTSFNAVAELINAGH 179
Query 177 TRIGYLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGR 236
I +L + + +RL GY DALA+ GIA N++L+ G+ + G + + LL RG
Sbjct 180 QEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIANGKWTPASGAEGVEMLLERGA 239
Query 237 NFTAVACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMA 296
F+A+ ND MA GAM L++ G+ VP ++S+IGFDD+ ++ Y P L++V+ P+ M
Sbjct 240 KFSALVASNDDMAIGAMKALHERGVAVPEQVSVIGFDDIAIAPYTVPALSSVKIPVTEMI 299
Query 297 TQAAELALALADNRPLPEITNVFSPTLVRRHSVSTPS 333
+ + + D FS L+RR S+ PS
Sbjct 300 QEIIGRLIFMLDGGDFSP-PKTFSGKLIRRDSLIAPS 335
>A6VNL0 HTH-type transcriptional repressor PurR [Actinobacillus
succinogenes (strain ATCC 55618 / DSM 22257 / CCUG 43843 /
130Z)]
Length=336
Score = 177 bits (450), Expect = 2e-56
Identities = 112/331 (34%), Positives = 172/331 (52%), Gaps = 3/331 (1%)
Query 1 MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTE 60
MATIKDVA+LAGVS TVS VIN + +E ++ V +A+E L Y P+A AR+L TT+
Sbjct 1 MATIKDVAKLAGVSTTTVSHVINETRHVAEETKKIVLNAIEQLHYSPSAVARSLKVNTTK 60
Query 61 TVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV 120
++G++V P+F ++ AVE Y G L + N +N +K + +E L + R ++
Sbjct 61 SIGMIVTTSEAPYFAEIIHAVEDHCYRQGYSLFLCNTQNNPEKIKNHLEMLAKKRVDGIL 120
Query 121 VHAKMIPDADLASLLKQMPGMVLINRIL-PGFENRCIALDDRY-GAWLATRHLIQQGHTR 178
V AD L+K + ++ P N LD+ + G +LA +HL+ GH
Sbjct 121 VMCSEYT-ADSLDLMKSFSDLPMVVMDWGPVNPNTDRILDNSFEGGYLAGKHLVDNGHKE 179
Query 179 IGYLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGRNF 238
I YL + + A R +G+ AL E+G+ N + G + G + M LL +
Sbjct 180 IAYLSAELKKTTARKRYEGFLKALHEAGLEMNPDWLLEGSFEPEDGYECMNRLLAQEFRP 239
Query 239 TAVACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQ 298
TA+ C ND MA GA+ + + G VP + S+IG+D+V +SR+ P LTT+ + +
Sbjct 240 TAIFCCNDVMALGAISAITEKGFRVPEDFSVIGYDNVHISRFSAPPLTTIHQSKARLGER 299
Query 299 AAELALALADNRPLPEITNVFSPTLVRRHSV 329
A +L ++ T P LV R SV
Sbjct 300 ALQLLFERIQDKTAKRETIEIHPELVIRKSV 330
>B4EWM9 HTH-type transcriptional repressor PurR [Proteus mirabilis
(strain HI4320)]
Length=341
Score = 177 bits (450), Expect = 2e-56
Identities = 114/333 (34%), Positives = 181/333 (54%), Gaps = 4/333 (1%)
Query 1 MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTE 60
MATIKDVA+ AGVS TVS VIN + +E +R AV +A++ L+Y P+A AR+L T+
Sbjct 1 MATIKDVAKRAGVSTTTVSHVINKTRFVAENTRAAVWAAIKELNYSPSAVARSLKVNHTK 60
Query 61 TVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV 120
++GL+ P+F +++AVE Y G L++ N ++N K++ + L + R L+
Sbjct 61 SIGLLATSSEAPYFAEVIEAVENSCYSKGYTLILCNSHNNLDKQKAYLAMLAQKRVDGLL 120
Query 121 VHAKMIPDADLASLL---KQMPGMVLINRILPGFENRCIALDDRYGAWLATRHLIQQGHT 177
V PD L SLL + +P +V+ G I + +G ++A R+LI++GH
Sbjct 121 VMCSEYPD-HLLSLLEGYRNIPMVVMDWGKARGDFTDTIIDNAFHGGYIAGRYLIERGHR 179
Query 178 RIGYLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGRN 237
IG + + RLQG+ A+ E+ I + + G+ + G +AMT++L + +
Sbjct 180 DIGIIPGPLERNTGGGRLQGFLKAMEEAKITVKEEWIVQGDFEPESGYKAMTQMLNQKQR 239
Query 238 FTAVACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMAT 297
TAV C D MA GA+ ++ G+ VP +IS++G+D++ +RY P LTTV P +
Sbjct 240 PTAVFCGGDVMAMGAICAADELGLRVPADISIVGYDNIRNARYFTPALTTVHQPKERLGQ 299
Query 298 QAAELALALADNRPLPEITNVFSPTLVRRHSVS 330
A + L N+ T P LV R SV+
Sbjct 300 MAFSMLLDRIVNKREDAQTIEVHPRLVERRSVA 332
>Q6LQB9 HTH-type transcriptional repressor PurR [Photobacterium
profundum (strain SS9)]
Length=334
Score = 177 bits (449), Expect = 2e-56
Identities = 109/331 (33%), Positives = 175/331 (53%), Gaps = 3/331 (1%)
Query 1 MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTE 60
MATIKDVAR+AGVS TVS VIN + +EA++ V +A++ L+Y P+A AR+L TT+
Sbjct 1 MATIKDVARMAGVSTTTVSHVINKTRFVAEATQKKVLAAVDDLNYAPSAVARSLKCNTTK 60
Query 61 TVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV 120
T+G++V ++PFF ++ VE+ Y+ G L++ N N K+R + L R L+
Sbjct 61 TIGMLVTKSTNPFFAEVIHGVEEYCYNAGYTLILCNTEGNLVKQRDYLRMLAEKRVDGLL 120
Query 121 VHAKMIPDADLASLLKQMPGMVLINRILPGFENRCIALDDR--YGAWLATRHLIQQGHTR 178
V I D DL LL + + ++ + D G ++AT+H I GH +
Sbjct 121 VMCSDI-DQDLLDLLARKSDLPMVIMDWGPESPLTDKIQDNAEQGGYVATKHFIDNGHEK 179
Query 179 IGYLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGRNF 238
IG L + S +RL+G+ A+AE+GI N+ + G+ + +A + +
Sbjct 180 IGCLSGHSEKSTCRERLKGFNKAMAEAGITVNNNWIIDGDFECESAVEAANQYIAMKDRP 239
Query 239 TAVACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQ 298
TA+ C+ND MA + G+ VP +IS+IG+D++ ++ Y P LTT+ P +
Sbjct 240 TAIFCFNDIMAMALISTFEQAGVRVPDDISVIGYDNIDLAPYFSPPLTTIHQPKRRLGKT 299
Query 299 AAELALALADNRPLPEITNVFSPTLVRRHSV 329
A E+ + ++ +P LV R SV
Sbjct 300 AIEILMERVKDKNHERRVFEMNPELVIRKSV 330
>B6EH86 HTH-type transcriptional repressor PurR [Aliivibrio salmonicida
(strain LFI1238)]
Length=333
Score = 175 bits (444), Expect = 1e-55
Identities = 110/330 (33%), Positives = 176/330 (53%), Gaps = 1/330 (0%)
Query 1 MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTE 60
MATIKDVA+LA VS TVS VIN + +EA++ V A+E L+Y P+A AR+L TT
Sbjct 1 MATIKDVAKLASVSTTTVSHVINKTRFVAEATQKRVWEAVEELNYAPSAVARSLKCNTTR 60
Query 61 TVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV 120
T+G++V +PFF M+ VE Y G L + N + K++ + L R L+
Sbjct 61 TIGMLVTQSFNPFFAEMMHGVENYCYKQGYTLFMCNTEGDLDKQKHYLRMLAEKRVDGLL 120
Query 121 VHAKMIPDADLASLLKQMPGMVLINRILPGFENRCIALDD-RYGAWLATRHLIQQGHTRI 179
V + + LA L K ++I P + +D+ G +LAT+HLI+ GHT+I
Sbjct 121 VMCSDLNEQLLAQLEKNTELPMVIMDWGPDSPHTDKIIDNSEEGGYLATKHLIENGHTKI 180
Query 180 GYLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGRNFT 239
G + + ++R+ G+Y AL+E+ + +N + G+ + S +++ ++L T
Sbjct 181 GCVTGQLDKATCKERIHGFYRALSEANLTSNPDWIFEGDFECSSASKSVEKMLQMEDKPT 240
Query 240 AVACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQA 299
A+ C+ND MA A+ + G+ VP +IS+IG+D++ +S Y P LTT+ P + A
Sbjct 241 ALFCFNDIMALAAISKIQQTGLRVPEDISIIGYDNIELSAYFSPPLTTIHQPKRRVGKTA 300
Query 300 AELALALADNRPLPEITNVFSPTLVRRHSV 329
E+ L ++ P +V R SV
Sbjct 301 VEILLERIKDKHHERRIFEMHPEVVTRKSV 330
>P0ACN7 HTH-type transcriptional repressor CytR [Escherichia coli
(strain K12)]
Length=341
Score = 172 bits (436), Expect = 2e-54
Identities = 99/303 (33%), Positives = 161/303 (53%), Gaps = 0/303 (0%)
Query 2 ATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTET 61
AT+KDVA A VS ATVSR + N K S+A+R V A + Y P R + + + T
Sbjct 10 ATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRT 69
Query 62 VGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALVV 121
+ ++V D+ DPFF +++ +E A + G +LIG+ H Q+E+ I+ +I + +++
Sbjct 70 ILVIVPDICDPFFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLL 129
Query 122 HAKMIPDADLASLLKQMPGMVLINRILPGFENRCIALDDRYGAWLATRHLIQQGHTRIGY 181
+P + +P MV+ N P E + +D+ A+ A +L +QGH RIG
Sbjct 130 LGSRLPFDASIEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFDAVNYLYEQGHKRIGC 189
Query 182 LCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGRNFTAV 241
+ + RLQGY AL GI + + + G+ G +AM +LL + TAV
Sbjct 190 IAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLLDLPQPPTAV 249
Query 242 ACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQAAE 301
C++D MA GA+ G+ VP ++S+IGFD++ ++++ P LTT+ P + +A
Sbjct 250 FCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAML 309
Query 302 LAL 304
L L
Sbjct 310 LLL 312
>P0ACP7 HTH-type transcriptional repressor PurR [Escherichia coli
(strain K12)]
Length=341
Score = 167 bits (424), Expect = 1e-52
Identities = 109/334 (33%), Positives = 184/334 (55%), Gaps = 6/334 (2%)
Query 1 MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTE 60
MATIKDVA+ A VS TVS VIN + +E +R AV +A++ L Y P+A AR+L T+
Sbjct 1 MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTK 60
Query 61 TVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV 120
++GL+ +F +++AVE+ + G L++GN ++N +K+R + + + R L+
Sbjct 61 SIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLL 120
Query 121 VHAKMIPDADLASL--LKQMPGMVLINRILPGFENRCIALDDRY-GAWLATRHLIQQGHT 177
V P+ LA L + +P MV+++ + +D+ + G ++A R+LI++GH
Sbjct 121 VMCSEYPEPLLAMLEEYRHIP-MVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHR 179
Query 178 RIGYLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGRN 237
IG + + RL G+ A+ E+ I + + G+ + G +AM ++L +
Sbjct 180 EIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHR 239
Query 238 FTAVACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMAT 297
TAV C D MA GA+ ++ G+ VP ++SLIG+D+V +RY P LTT+ P ++
Sbjct 240 PTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGE 299
Query 298 QAAELAL-ALADNRPLPEITNVFSPTLVRRHSVS 330
A + L + + R P+ V P L+ R SV+
Sbjct 300 TAFNMLLDRIVNKREEPQSIEV-HPRLIERRSVA 332
>P37947 HTH-type transcriptional regulator DegA [Bacillus subtilis
(strain 168)]
Length=337
Score = 166 bits (421), Expect = 4e-52
Identities = 103/332 (31%), Positives = 177/332 (53%), Gaps = 6/332 (2%)
Query 3 TIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTETV 62
TI DVA+ AGVS+ TVSRVINN+ + S+ +R V + M ++Y PN +A AL + T +
Sbjct 4 TIYDVAKAAGVSITTVSRVINNTGRISDKTRQKVMNVMNEMAYTPNVHAAALTGKRTNMI 63
Query 63 GLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALVVH 122
LV D+S+PF+G + K++E+ A G +LI + ++ +KE + +++ + ++
Sbjct 64 ALVAPDISNPFYGELAKSIEERADELGFQMLICSTDYDPKKETKYF-SVLKQKKVDGIIF 122
Query 123 AKMIPDADLASLLKQMPG----MVLINRILPGFENRCIALDDRYGAWLATRHLIQQGHTR 178
A I D S L+++ + +I++ P + +DD G + A +HL+ GHT
Sbjct 123 ATGIESHDSMSALEEIASEQIPIAMISQDKPLLPMDIVVIDDVRGGYEAAKHLLSLGHTN 182
Query 179 IGYLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGRNF 238
I + + S + ++R++G+ A+ E+G+ ++ L+ G++ +LL R
Sbjct 183 IACIIGDGSTTGEKNRIKGFRQAMEEAGVPIDESLIIQTRFSLESGKEEAGKLLDRNAP- 241
Query 239 TAVACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQ 298
TA+ +ND +A A+ GI VP ++S+IGFD+ +++ P LTTV PI M +
Sbjct 242 TAIFAFNDVLACAAIQAARIRGIKVPDDLSIIGFDNTILAEMAAPPLTTVAQPIKEMGAE 301
Query 299 AAELALALADNRPLPEITNVFSPTLVRRHSVS 330
A + + V P LV RHS S
Sbjct 302 RHRTAGRSNRGKRKAKQKIVLPPELVVRHSTS 333
>P25144 Catabolite control protein A [Bacillus subtilis (strain
168)]
Length=334
Score = 163 bits (413), Expect = 5e-51
Identities = 97/313 (31%), Positives = 159/313 (51%), Gaps = 1/313 (0%)
Query 3 TIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTETV 62
TI DVAR A VS+ATVSRV+N +P +R V A+E L Y PNA AR LA + T TV
Sbjct 5 TIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIERLGYRPNAVARGLASKKTTTV 64
Query 63 GLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALVVH 122
G+++ D+S F+ + + +E +A +++ N N +KE + ++ + +V
Sbjct 65 GVIIPDISSIFYSELARGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFM 124
Query 123 AKMIPDADLASLLKQMPGMVLINRILPGFENRCIALDDRYGAWLATRHLIQQGHTRIGYL 182
I D +A + +VL + E +A+D + A + L+ +GHT I ++
Sbjct 125 GGNITDEHVAEFKRSPVPIVLAASVEEQEETPSVAIDYEQAIYDAVKLLVDKGHTDIAFV 184
Query 183 CSNHSIS-DAEDRLQGYYDALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGRNFTAV 241
+ + +LQGY AL E+ + N++ V G+ G +A+ L+ + TA+
Sbjct 185 SGPMAEPINRSKKLQGYKRALEEANLPFNEQFVAEGDYTYDSGLEALQHLMSLDKKPTAI 244
Query 242 ACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQAAE 301
D MA G + D G+ +P ++ +IGFD+ +S VRP+L+TV P + A
Sbjct 245 LSATDEMALGIIHAAQDQGLSIPEDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMR 304
Query 302 LALALADNRPLPE 314
L L + P+ E
Sbjct 305 LLTKLMNKEPVEE 317
Lambda K H a alpha
0.320 0.133 0.384 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1298781
Database: 0967e023c3f0635cdd105edd574bc3d2.SwissProt.fasta
Posted date: May 31, 2024 2:57 PM
Number of letters in database: 5,078
Number of sequences in database: 15
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
