BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 3cc56b1e21fae8a30bb94c6991feafaa.SwissProt.fasta
16 sequences; 1,532 total letters
Query= Z4077
Length=99
Score E
Sequences producing significant alignments: (Bits) Value
Q46905 Ferredoxin-like protein YgcO [Escherichia coli (strain K12)] 171 2e-61
Q83SQ6 Ferredoxin-like protein FixX [Shigella flexneri] 85.9 2e-27
Q8ZRW8 Ferredoxin-like protein FixX [Salmonella typhimurium (stra... 85.5 3e-27
Q8Z9K8 Ferredoxin-like protein FixX [Salmonella typhi] 85.1 4e-27
P68647 Ferredoxin-like protein FixX [Escherichia coli O6:H1 (stra... 85.1 4e-27
P68648 Ferredoxin-like protein FixX [Escherichia coli O157:H7] 85.1 4e-27
P68646 Ferredoxin-like protein FixX [Escherichia coli (strain K12)] 85.1 4e-27
P77714 Ferredoxin-like protein YdiT [Escherichia coli (strain K12)] 82.4 5e-26
Q05561 Ferredoxin-like protein [Rhizobium leguminosarum bv. phase... 65.5 2e-19
Q53207 Ferredoxin-like protein [Sinorhizobium fredii (strain NBRC... 63.9 9e-19
P09822 Ferredoxin-like protein [Rhizobium meliloti (strain 1021)] 63.9 1e-18
P53658 Ferredoxin-like protein [Azotobacter vinelandii] 62.0 5e-18
P10326 Ferredoxin-like protein [Bradyrhizobium diazoefficiens (st... 62.0 6e-18
P26485 Ferredoxin-like protein [Azorhizobium caulinodans (strain ... 60.1 3e-17
P09823 Ferredoxin-like protein [Rhizobium leguminosarum] 58.9 9e-17
P08710 Ferredoxin-like protein [Rhizobium leguminosarum bv. trifo... 55.5 2e-15
>Q46905 Ferredoxin-like protein YgcO [Escherichia coli (strain
K12)]
Length=86
Score = 171 bits (433), Expect = 2e-61
Identities = 77/86 (90%), Positives = 80/86 (93%), Gaps = 0/86 (0%)
Query 13 MSVARNLWRAADAPHIVPADSVERQMVQRLINACPVGLFSLTPEGDLRVDYHGCLECGTC 72
MSVARNLWR ADAPHIVPADSVERQ +RLINACP GLFSLTPEG+LR+DY CLECGTC
Sbjct 1 MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGNLRIDYRSCLECGTC 60
Query 73 RLLCDESTLQQWRYPPSGFGITYRFG 98
RLLCDESTLQQWRYPPSGFGITYRFG
Sbjct 61 RLLCDESTLQQWRYPPSGFGITYRFG 86
>Q83SQ6 Ferredoxin-like protein FixX [Shigella flexneri]
Length=95
Score = 85.9 bits (211), Expect = 2e-27
Identities = 35/73 (48%), Positives = 49/73 (67%), Gaps = 0/73 (0%)
Query 26 PHIVPADSVERQMVQRLINACPVGLFSLTPEGDLRVDYHGCLECGTCRLLCDESTLQQWR 85
PHIV ++Q+++ L+ ACP GL+ +G +R DY GCLECGTCR+L S L+QW
Sbjct 23 PHIVVKADADKQVLELLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWE 82
Query 86 YPPSGFGITYRFG 98
YP FG+ +R+G
Sbjct 83 YPRGTFGVEFRYG 95
>Q8ZRW8 Ferredoxin-like protein FixX [Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720)]
Length=95
Score = 85.5 bits (210), Expect = 3e-27
Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 0/75 (0%)
Query 24 DAPHIVPADSVERQMVQRLINACPVGLFSLTPEGDLRVDYHGCLECGTCRLLCDESTLQQ 83
D+PHI+ ++Q ++ LI ACP GL+ +G +R DY GCLECGTCR+L ++ L++
Sbjct 21 DSPHIILKTDPDKQALEVLIKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLDTALEK 80
Query 84 WRYPPSGFGITYRFG 98
W YP FG+ +R+G
Sbjct 81 WEYPRGTFGVEFRYG 95
>Q8Z9K8 Ferredoxin-like protein FixX [Salmonella typhi]
Length=95
Score = 85.1 bits (209), Expect = 4e-27
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 0/75 (0%)
Query 24 DAPHIVPADSVERQMVQRLINACPVGLFSLTPEGDLRVDYHGCLECGTCRLLCDESTLQQ 83
D+PHI+ ++Q ++ L+ ACP GL+ +G +R DY GCLECGTCR+L ++ L++
Sbjct 21 DSPHIILKTDPDKQALEVLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLDTALEK 80
Query 84 WRYPPSGFGITYRFG 98
W YP FG+ +R+G
Sbjct 81 WEYPRGTFGVEFRYG 95
>P68647 Ferredoxin-like protein FixX [Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC)]
Length=95
Score = 85.1 bits (209), Expect = 4e-27
Identities = 35/73 (48%), Positives = 48/73 (66%), Gaps = 0/73 (0%)
Query 26 PHIVPADSVERQMVQRLINACPVGLFSLTPEGDLRVDYHGCLECGTCRLLCDESTLQQWR 85
PHIV ++Q ++ L+ ACP GL+ +G +R DY GCLECGTCR+L S L+QW
Sbjct 23 PHIVVKADADKQALELLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWE 82
Query 86 YPPSGFGITYRFG 98
YP FG+ +R+G
Sbjct 83 YPRGTFGVEFRYG 95
>P68648 Ferredoxin-like protein FixX [Escherichia coli O157:H7]
Length=95
Score = 85.1 bits (209), Expect = 4e-27
Identities = 35/73 (48%), Positives = 48/73 (66%), Gaps = 0/73 (0%)
Query 26 PHIVPADSVERQMVQRLINACPVGLFSLTPEGDLRVDYHGCLECGTCRLLCDESTLQQWR 85
PHIV ++Q ++ L+ ACP GL+ +G +R DY GCLECGTCR+L S L+QW
Sbjct 23 PHIVVKADADKQALELLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWE 82
Query 86 YPPSGFGITYRFG 98
YP FG+ +R+G
Sbjct 83 YPRGTFGVEFRYG 95
>P68646 Ferredoxin-like protein FixX [Escherichia coli (strain
K12)]
Length=95
Score = 85.1 bits (209), Expect = 4e-27
Identities = 35/73 (48%), Positives = 48/73 (66%), Gaps = 0/73 (0%)
Query 26 PHIVPADSVERQMVQRLINACPVGLFSLTPEGDLRVDYHGCLECGTCRLLCDESTLQQWR 85
PHIV ++Q ++ L+ ACP GL+ +G +R DY GCLECGTCR+L S L+QW
Sbjct 23 PHIVVKADADKQALELLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWE 82
Query 86 YPPSGFGITYRFG 98
YP FG+ +R+G
Sbjct 83 YPRGTFGVEFRYG 95
>P77714 Ferredoxin-like protein YdiT [Escherichia coli (strain
K12)]
Length=97
Score = 82.4 bits (202), Expect = 5e-26
Identities = 33/73 (45%), Positives = 48/73 (66%), Gaps = 0/73 (0%)
Query 26 PHIVPADSVERQMVQRLINACPVGLFSLTPEGDLRVDYHGCLECGTCRLLCDESTLQQWR 85
PHI+ A++ + +L+ ACP GL+ G++ D GCLECGTCR+LC + L+QW+
Sbjct 25 PHIILAENPDINEFHKLMKACPAGLYKQDDAGNIHFDSAGCLECGTCRVLCGNTILEQWQ 84
Query 86 YPPSGFGITYRFG 98
YP FGI +R+G
Sbjct 85 YPAGTFGIDFRYG 97
>Q05561 Ferredoxin-like protein [Rhizobium leguminosarum bv. phaseoli]
Length=99
Score = 65.5 bits (158), Expect = 2e-19
Identities = 25/57 (44%), Positives = 36/57 (63%), Gaps = 0/57 (0%)
Query 42 LINACPVGLFSLTPEGDLRVDYHGCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG 98
L + CP + L +G + V GC+ECGTCR+LC+ S +W YP GFG+ ++FG
Sbjct 43 LTSVCPAKCYELNDQGQVEVIADGCMECGTCRVLCEASGDIEWNYPRGGFGVLFKFG 99
>Q53207 Ferredoxin-like protein [Sinorhizobium fredii (strain
NBRC 101917 / NGR234)]
Length=97
Score = 63.9 bits (154), Expect = 9e-19
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 0/53 (0%)
Query 46 CPVGLFSLTPEGDLRVDYHGCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG 98
CP + + +G + V GC+ECGTCR+LC+ES W YP GFG+ ++FG
Sbjct 45 CPAKCYEVNEDGQVEVIADGCMECGTCRVLCEESGDIDWSYPRGGFGVLFKFG 97
>P09822 Ferredoxin-like protein [Rhizobium meliloti (strain 1021)]
Length=98
Score = 63.9 bits (154), Expect = 1e-18
Identities = 30/78 (38%), Positives = 42/78 (54%), Gaps = 3/78 (4%)
Query 23 ADAPHIV--PADSVERQMVQRLINACPVGLFSLTPEGDLRVDYHGCLECGTCRLLCDEST 80
A PHI P S ++ L CP + L G + V GC+ECGTCR+LC+ +
Sbjct 22 AGRPHITVRPHRSPSLNLLA-LTRVCPAKCYELNETGQVEVTADGCMECGTCRVLCEANG 80
Query 81 LQQWRYPPSGFGITYRFG 98
+W YP GFG+ ++FG
Sbjct 81 DVEWSYPRGGFGVLFKFG 98
>P53658 Ferredoxin-like protein [Azotobacter vinelandii]
Length=94
Score = 62.0 bits (149), Expect = 5e-18
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 0/53 (0%)
Query 46 CPVGLFSLTPEGDLRVDYHGCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG 98
CP G ++ G + + GCLECGTCR++C +S +W +P GFGI ++FG
Sbjct 42 CPAGCYTRETNGKVTLVTDGCLECGTCRIICQDSGNLEWEWPRGGFGILFKFG 94
>P10326 Ferredoxin-like protein [Bradyrhizobium diazoefficiens
(strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA
110)]
Length=98
Score = 62.0 bits (149), Expect = 6e-18
Identities = 26/77 (34%), Positives = 42/77 (55%), Gaps = 1/77 (1%)
Query 23 ADAPHI-VPADSVERQMVQRLINACPVGLFSLTPEGDLRVDYHGCLECGTCRLLCDESTL 81
A PH+ V A + L+ ACP + L G + V GC+ECGTCR++ + +
Sbjct 22 AGHPHVRVRAHKTPSPQLLTLLKACPARCYELNDNGQVEVTVDGCIECGTCRVIAEPTGD 81
Query 82 QQWRYPPSGFGITYRFG 98
+W +P G+G+ ++FG
Sbjct 82 IEWSHPRGGYGVLFKFG 98
>P26485 Ferredoxin-like protein [Azorhizobium caulinodans (strain
ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845
/ NCIMB 13405 / ORS 571)]
Length=97
Score = 60.1 bits (144), Expect = 3e-17
Identities = 22/57 (39%), Positives = 34/57 (60%), Gaps = 0/57 (0%)
Query 42 LINACPVGLFSLTPEGDLRVDYHGCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG 98
++ CP + L G + V GC+ECGTCR++ + S +W YP GFG+ ++FG
Sbjct 41 MLKLCPARCYELNEAGQVEVTVDGCVECGTCRVIAEPSGDIEWTYPRGGFGVLFKFG 97
>P09823 Ferredoxin-like protein [Rhizobium leguminosarum]
Length=98
Score = 58.9 bits (141), Expect = 9e-17
Identities = 27/73 (37%), Positives = 39/73 (53%), Gaps = 5/73 (7%)
Query 26 PHIVPADSVERQMVQRLINACPVGLFSLTPEGDLRVDYHGCLECGTCRLLCDESTLQQWR 85
PH P+ S+ L CP + + G + + GCLECGTCR+L + S +W
Sbjct 31 PHRSPSPSL-----LALTQICPAKCYEVNEIGQVAIVSDGCLECGTCRVLAEASGDIKWN 85
Query 86 YPPSGFGITYRFG 98
YP GFG+ ++FG
Sbjct 86 YPRGGFGVLFKFG 98
>P08710 Ferredoxin-like protein [Rhizobium leguminosarum bv. trifolii]
Length=98
Score = 55.5 bits (132), Expect = 2e-15
Identities = 22/57 (39%), Positives = 30/57 (53%), Gaps = 0/57 (0%)
Query 42 LINACPVGLFSLTPEGDLRVDYHGCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG 98
L CP + L + + GCLECGTC +LC +W YP GFG+ ++FG
Sbjct 42 LTQVCPAKCYQLNDRRQVIIVSDGCLECGTCNVLCGPDGDIEWTYPRGGFGVLFKFG 98
Lambda K H a alpha
0.329 0.143 0.494 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 79200
Database: 3cc56b1e21fae8a30bb94c6991feafaa.SwissProt.fasta
Posted date: May 31, 2024 4:19 AM
Number of letters in database: 1,532
Number of sequences in database: 16
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
