BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 9eea958c67763483e4a2a669818d0c39.SwissProt.fasta
18 sequences; 5,869 total letters
Query= Z4015
Length=309
Score E
Sequences producing significant alignments: (Bits) Value
Q8X4S5 Arabinose 5-phosphate isomerase GutQ [Escherichia coli O15... 597 0.0
P17115 Arabinose 5-phosphate isomerase GutQ [Escherichia coli (st... 597 0.0
Q83MK2 Arabinose 5-phosphate isomerase GutQ [Shigella flexneri] 594 0.0
Q8FEN7 Arabinose 5-phosphate isomerase GutQ [Escherichia coli O6:... 587 0.0
Q8Z4C7 Arabinose 5-phosphate isomerase GutQ [Salmonella typhi] 560 0.0
Q8ZMJ9 Arabinose 5-phosphate isomerase GutQ [Salmonella typhimuri... 556 0.0
Q9HVW0 Arabinose 5-phosphate isomerase KdsD [Pseudomonas aerugino... 298 5e-104
Q8D1Q8 Arabinose 5-phosphate isomerase KdsD [Yersinia pestis] 281 3e-97
Q83JF4 Arabinose 5-phosphate isomerase KdsD [Shigella flexneri] 276 3e-95
Q8X9J0 Arabinose 5-phosphate isomerase KdsD [Escherichia coli O15... 276 3e-95
P45395 Arabinose 5-phosphate isomerase KdsD [Escherichia coli (st... 275 5e-95
Q5NGP7 Arabinose 5-phosphate isomerase KdsD [Francisella tularens... 243 3e-82
Q8FDQ2 Arabinose 5-phosphate isomerase KpsF [Escherichia coli O6:... 231 1e-77
Q47334 Arabinose 5-phosphate isomerase KpsF [Escherichia coli] 227 3e-76
P42502 Arabinose 5-phosphate isomerase KpsF [Escherichia coli] 218 6e-73
P50100 Uncharacterized protein MK0525 [Methanopyrus kandleri (str... 46.6 2e-09
P37767 Uncharacterized HTH-type transcriptional regulator YfhH [E... 43.9 3e-08
P9WKI7 Inosine-5'-monophosphate dehydrogenase [Mycobacterium tube... 37.4 5e-06
>Q8X4S5 Arabinose 5-phosphate isomerase GutQ [Escherichia coli
O157:H7]
Length=321
Score = 597 bits (1540), Expect = 0.0
Identities = 308/308 (100%), Positives = 308/308 (100%), Gaps = 0/308 (0%)
Query 1 MLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFF 60
MLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFF
Sbjct 14 MLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFF 73
Query 61 VHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLA 120
VHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLA
Sbjct 74 VHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLA 133
Query 121 AKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGA 180
AKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGA
Sbjct 134 AKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGA 193
Query 181 RLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRR 240
RLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRR
Sbjct 194 RLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRR 253
Query 241 WLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQ 300
WLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQ
Sbjct 254 WLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQ 313
Query 301 DFYQAGII 308
DFYQAGII
Sbjct 314 DFYQAGII 321
>P17115 Arabinose 5-phosphate isomerase GutQ [Escherichia coli
(strain K12)]
Length=321
Score = 597 bits (1540), Expect = 0.0
Identities = 308/308 (100%), Positives = 308/308 (100%), Gaps = 0/308 (0%)
Query 1 MLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFF 60
MLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFF
Sbjct 14 MLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFF 73
Query 61 VHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLA 120
VHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLA
Sbjct 74 VHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLA 133
Query 121 AKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGA 180
AKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGA
Sbjct 134 AKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGA 193
Query 181 RLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRR 240
RLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRR
Sbjct 194 RLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRR 253
Query 241 WLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQ 300
WLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQ
Sbjct 254 WLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQ 313
Query 301 DFYQAGII 308
DFYQAGII
Sbjct 314 DFYQAGII 321
>Q83MK2 Arabinose 5-phosphate isomerase GutQ [Shigella flexneri]
Length=321
Score = 594 bits (1532), Expect = 0.0
Identities = 305/308 (99%), Positives = 307/308 (99%), Gaps = 0/308 (0%)
Query 1 MLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFF 60
MLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFF
Sbjct 14 MLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFF 73
Query 61 VHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLA 120
VHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLA
Sbjct 74 VHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLA 133
Query 121 AKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGA 180
AKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGA
Sbjct 134 AKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGA 193
Query 181 RLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRR 240
RLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRR
Sbjct 194 RLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRR 253
Query 241 WLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQ 300
WLVGGGALTTPVNEAMT GGTTLQ+QSRAIDAKE+LMKRKITAAPVVDENGKLTGAINLQ
Sbjct 254 WLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEVLMKRKITAAPVVDENGKLTGAINLQ 313
Query 301 DFYQAGII 308
DFYQAGII
Sbjct 314 DFYQAGII 321
>Q8FEN7 Arabinose 5-phosphate isomerase GutQ [Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=321
Score = 587 bits (1514), Expect = 0.0
Identities = 303/308 (98%), Positives = 305/308 (99%), Gaps = 0/308 (0%)
Query 1 MLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFF 60
MLELQEAS LPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFF
Sbjct 14 MLELQEASHLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFF 73
Query 61 VHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLA 120
VHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLA
Sbjct 74 VHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLA 133
Query 121 AKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGA 180
AKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGA
Sbjct 134 AKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGA 193
Query 181 RLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRR 240
RLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCD Q+ V+GVFTDGDLRR
Sbjct 194 RLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDDQRLVKGVFTDGDLRR 253
Query 241 WLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQ 300
WLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQ
Sbjct 254 WLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQ 313
Query 301 DFYQAGII 308
DFYQAGII
Sbjct 314 DFYQAGII 321
>Q8Z4C7 Arabinose 5-phosphate isomerase GutQ [Salmonella typhi]
Length=321
Score = 560 bits (1444), Expect = 0.0
Identities = 287/308 (93%), Positives = 295/308 (96%), Gaps = 0/308 (0%)
Query 1 MLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFF 60
MLELQEASRLPERLGDDFVRAANII+HCEGKV+VSGIGKSGHIGKKIAATLASTGTPAFF
Sbjct 14 MLELQEASRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFF 73
Query 61 VHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLA 120
VHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS+ALLAMTGKP SPLG A
Sbjct 74 VHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKPHSPLGRA 133
Query 121 AKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGA 180
AKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGA
Sbjct 134 AKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGA 193
Query 181 RLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRR 240
RLLN VHHLMR+ DAIPQV L SVMDAMLELSRTGLGLVAVCD Q V+GVFTDGDLRR
Sbjct 194 RLLNNVHHLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRR 253
Query 241 WLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQ 300
WLVGGGALTTPV+EAMT G TLQ+QSRAIDAKE+LMKRKITAAPVVDENGKLTGAINLQ
Sbjct 254 WLVGGGALTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQ 313
Query 301 DFYQAGII 308
DFYQAGII
Sbjct 314 DFYQAGII 321
>Q8ZMJ9 Arabinose 5-phosphate isomerase GutQ [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=321
Score = 556 bits (1434), Expect = 0.0
Identities = 286/308 (93%), Positives = 294/308 (95%), Gaps = 0/308 (0%)
Query 1 MLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFF 60
MLELQEASRLPERLGDDFVRAANII+HCEGKV+VSGIGKSGHIGKKIAATLASTGTPAFF
Sbjct 14 MLELQEASRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFF 73
Query 61 VHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLA 120
VHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS+ALLAMTGK SPLG A
Sbjct 74 VHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKLHSPLGRA 133
Query 121 AKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGA 180
AKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGA
Sbjct 134 AKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGA 193
Query 181 RLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRR 240
RLLN VHHLMR+ DAIPQV L SVMDAMLELSRTGLGLVAVCD Q V+GVFTDGDLRR
Sbjct 194 RLLNNVHHLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRR 253
Query 241 WLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQ 300
WLVGGGALTTPV+EAMT G TLQ+QSRAIDAKE+LMKRKITAAPVVDENGKLTGAINLQ
Sbjct 254 WLVGGGALTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQ 313
Query 301 DFYQAGII 308
DFYQAGII
Sbjct 314 DFYQAGII 321
>Q9HVW0 Arabinose 5-phosphate isomerase KdsD [Pseudomonas aeruginosa
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847
/ LMG 12228 / 1C / PRS 101 / PAO1)]
Length=326
Score = 298 bits (763), Expect = 5e-104
Identities = 156/308 (51%), Positives = 214/308 (69%), Gaps = 1/308 (0%)
Query 2 LELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFV 61
LE L R+GDDFV+A ++L +G+VVV G+GKSGH+GKKIAATLASTGTP+FFV
Sbjct 19 LERDAVDSLLARIGDDFVKACELLLAGKGRVVVVGMGKSGHVGKKIAATLASTGTPSFFV 78
Query 62 HPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAA 121
HPAEA HGD+GMI DV+L +S SG E+ ++P ++ I L++MTG P SPL AA
Sbjct 79 HPAEASHGDMGMITKDDVVLALSNSGSTAEIVTLLPLIKRLGITLISMTGNPESPLAKAA 138
Query 122 KAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGAR 181
+ LD SV +EACP++LAPTSST TL++GDALA+A+++ARGF EDFA SHP GALG R
Sbjct 139 EVNLDASVGQEACPLNLAPTSSTTVTLVLGDALAIALLEARGFTAEDFAFSHPGGALGRR 198
Query 182 LLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRW 241
LL KV +M + +PQV L S+ A++E++R GLG+ V D ++ G+FTDGDLRR
Sbjct 199 LLLKVEDVMHVGEGLPQVLLGTSLTGALMEMTRKGLGMTVVLDEHGKLAGIFTDGDLRRA 258
Query 242 LVGG-GALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQ 300
L G +++ MTV G T++++ A +A +I+ KI A VVD + + GA+N+
Sbjct 259 LDRGIDVRQVTIDQVMTVHGKTVRAEILAAEALKIMEDNKIGALVVVDADDRPVGALNMH 318
Query 301 DFYQAGII 308
D +AG++
Sbjct 319 DLLRAGVM 326
>Q8D1Q8 Arabinose 5-phosphate isomerase KdsD [Yersinia pestis]
Length=328
Score = 281 bits (718), Expect = 3e-97
Identities = 148/308 (48%), Positives = 206/308 (67%), Gaps = 2/308 (1%)
Query 2 LELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFV 61
+E + ++L + + +DF RA I C GKVVV G+GKSGHIG KIAAT ASTGTPAFFV
Sbjct 22 IEREGLAQLDQYINEDFSRACEAIFRCHGKVVVMGMGKSGHIGCKIAATFASTGTPAFFV 81
Query 62 HPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAA 121
HP EA HGDLGMI +D++L IS SG + E+ +IP L+ + I L+ M+ P S +G AA
Sbjct 82 HPGEASHGDLGMITPQDIVLAISNSGESNEILTLIPVLKRQKILLICMSSNPESTMGKAA 141
Query 122 KAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGAR 181
L I+V +EACP+ LAPT+ST TL+MGDALA+A+++ARGF +EDFA SHP GALG +
Sbjct 142 DIHLCINVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTQEDFALSHPGGALGRK 201
Query 182 LLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRR- 240
LL ++ +M IP V+ AS+ DA+LE++R LGL +CD +++G+FTDGDLRR
Sbjct 202 LLLRISDIMHTGTEIPTVSPDASLRDALLEITRKSLGLTVICDDSMRIKGIFTDGDLRRV 261
Query 241 WLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQ 300
+ +G + + MT GG + A+DA ++ R ITA V D +L G +++
Sbjct 262 FDMGIDLNNAKIADVMTRGGIRVPPNILAVDALNLMESRHITALLVAD-GDQLLGVVHMH 320
Query 301 DFYQAGII 308
D +AG++
Sbjct 321 DMLRAGVV 328
>Q83JF4 Arabinose 5-phosphate isomerase KdsD [Shigella flexneri]
Length=328
Score = 276 bits (705), Expect = 3e-95
Identities = 141/308 (46%), Positives = 205/308 (67%), Gaps = 2/308 (1%)
Query 2 LELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFV 61
+E + + L + + +F A + C+GKVVV G+GKSGHIG+K+AAT ASTGTP+FFV
Sbjct 22 IERECLAELDQYINQNFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAATFASTGTPSFFV 81
Query 62 HPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAA 121
HP+EA HGDLGM+ +DV++ IS SG + E+ +IP L+ + L+ +TG+P S + AA
Sbjct 82 HPSEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICITGRPESSMARAA 141
Query 122 KAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGAR 181
L + V +EACP+ LAPTSST TL+MGDALA+A+++ARGF EDFA SHP GALG +
Sbjct 142 DVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRK 201
Query 182 LLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRR- 240
LL +V+ +M D IP V TAS+ DA+LE++R LG+ +CD ++G+FTDGDLRR
Sbjct 202 LLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMIEGIFTDGDLRRV 261
Query 241 WLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQ 300
+ +G + + MT GG ++ A++A ++ R IT+ V D L G +++
Sbjct 262 FDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVAD-GDHLLGVLHMH 320
Query 301 DFYQAGII 308
D +AG++
Sbjct 321 DLLRAGVV 328
>Q8X9J0 Arabinose 5-phosphate isomerase KdsD [Escherichia coli
O157:H7]
Length=328
Score = 276 bits (705), Expect = 3e-95
Identities = 142/308 (46%), Positives = 204/308 (66%), Gaps = 2/308 (1%)
Query 2 LELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFV 61
+E + + L + + +F A + C+GKVVV G+GKSGHIG+K+AAT ASTGTP+FFV
Sbjct 22 IERECLAELDQYINQNFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAATFASTGTPSFFV 81
Query 62 HPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAA 121
HP EA HGDLGM+ +DV++ IS SG + E+ +IP L+ I L+ +TG+P S + AA
Sbjct 82 HPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHIPLICITGRPESSMARAA 141
Query 122 KAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGAR 181
L + V +EACP+ LAPTSST TL+MGDALA+A+++ARGF EDFA SHP GALG +
Sbjct 142 DVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRK 201
Query 182 LLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRR- 240
LL +V+ +M D IP V TAS+ DA+LE++R LG+ +CD ++G+FTDGDLRR
Sbjct 202 LLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMIEGIFTDGDLRRV 261
Query 241 WLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQ 300
+ +G + + MT GG ++ A++A ++ R IT+ V D L G +++
Sbjct 262 FDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVAD-GDHLLGVLHMH 320
Query 301 DFYQAGII 308
D +AG++
Sbjct 321 DLLRAGVV 328
>P45395 Arabinose 5-phosphate isomerase KdsD [Escherichia coli
(strain K12)]
Length=328
Score = 275 bits (704), Expect = 5e-95
Identities = 141/308 (46%), Positives = 204/308 (66%), Gaps = 2/308 (1%)
Query 2 LELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFV 61
+E + + L + + +F A + C+GKVVV G+GKSGHIG+K+AAT ASTGTP+FFV
Sbjct 22 IERECLAELDQYINQNFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAATFASTGTPSFFV 81
Query 62 HPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAA 121
HP EA HGDLGM+ +DV++ IS SG + E+ +IP L+ + L+ +TG+P S + AA
Sbjct 82 HPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICITGRPESSMARAA 141
Query 122 KAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGAR 181
L + V +EACP+ LAPTSST TL+MGDALA+A+++ARGF EDFA SHP GALG +
Sbjct 142 DVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRK 201
Query 182 LLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRR- 240
LL +V+ +M D IP V TAS+ DA+LE++R LG+ +CD ++G+FTDGDLRR
Sbjct 202 LLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMIEGIFTDGDLRRV 261
Query 241 WLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQ 300
+ +G + + MT GG ++ A++A ++ R IT+ V D L G +++
Sbjct 262 FDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVAD-GDHLLGVLHMH 320
Query 301 DFYQAGII 308
D +AG++
Sbjct 321 DLLRAGVV 328
>Q5NGP7 Arabinose 5-phosphate isomerase KdsD [Francisella tularensis
subsp. tularensis (strain SCHU S4 / Schu 4)]
Length=327
Score = 243 bits (619), Expect = 3e-82
Identities = 130/304 (43%), Positives = 197/304 (65%), Gaps = 5/304 (2%)
Query 2 LELQEASRLPERLGDDFVRAANIILHC---EGKVVVSGIGKSGHIGKKIAATLASTGTPA 58
LE++ +L + ++F +A IIL + +V+++G+GKSGHIGKK+AAT ASTGTPA
Sbjct 18 LEIETLEKLKNSIDENFEKACEIILENNRDKSRVIITGMGKSGHIGKKMAATFASTGTPA 77
Query 59 FFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLG 118
FFVHP EA HGD GMI DV++ IS SG + E+ ++P ++ I ++A+T P S L
Sbjct 78 FFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLLPMIKHLDIPIIAITSNPKSILA 137
Query 119 LAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGAL 178
+ L++ V++EACP++LAPTSST TL++GDALA+A+++A+ F+E+DFA SHP GAL
Sbjct 138 RNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAKNFSEKDFAFSHPNGAL 197
Query 179 GARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDL 238
G +L+ KV ++MR+ + IP V T ++ A+LE+S G+G V + + G+FTDGDL
Sbjct 198 GRKLILKVENIMRKGNEIPIVKPTDNIRKAILEISDKGVGNTLVAE-NNTLLGIFTDGDL 256
Query 239 RRWLVGGGALT-TPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAI 297
RR + ++E MT ++ + AI A E + K +IT+ VVD + G +
Sbjct 257 RRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEITSLAVVDNGHNILGIV 316
Query 298 NLQD 301
+ D
Sbjct 317 TMHD 320
>Q8FDQ2 Arabinose 5-phosphate isomerase KpsF [Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=327
Score = 231 bits (589), Expect = 1e-77
Identities = 122/285 (43%), Positives = 185/285 (65%), Gaps = 3/285 (1%)
Query 18 FVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESR 77
+ R N+I++C+G V++SG+GKSGH+G+KI+ATLASTGTP+FF+HPAEA HGDLGMI
Sbjct 45 YQRVLNLIMNCKGHVILSGMGKSGHVGRKISATLASTGTPSFFIHPAEAFHGDLGMITPY 104
Query 78 DVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMH 137
D+++ IS SG E+ ++P L++ ++A+T S L A AVL++ + E CP +
Sbjct 105 DLLILISASGETDEILKLVPSLKNFGNRIIAITNNGNSTLAKNADAVLELHMANETCPNN 164
Query 138 LAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIP 197
LAPT+ST T+ +GDALA+A++ R F DFAR HP G+LG RLL +V +M+ D +P
Sbjct 165 LAPTTSTTLTMAIGDALAIAMIHQRKFMPNDFARYHPGGSLGRRLLTRVADVMQHD--VP 222
Query 198 QVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGALTT-PVNEAM 256
V L AS + ++ G+V V DA+ + G+ TDGDLRR++ G+LT+ + M
Sbjct 223 AVQLDASFKTVIQRITSGCQGMVMVEDAEGGLAGIITDGDLRRFMEKEGSLTSATAAQMM 282
Query 257 TVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQD 301
T TL + I+A+E + K +++ V ++ K+TG + + D
Sbjct 283 TREPLTLPEDTMIIEAEEKMQKHRVSTLLVTNKANKVTGLVRIFD 327
>Q47334 Arabinose 5-phosphate isomerase KpsF [Escherichia coli]
Length=327
Score = 227 bits (579), Expect = 3e-76
Identities = 120/285 (42%), Positives = 184/285 (65%), Gaps = 3/285 (1%)
Query 18 FVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESR 77
+ R N+I++C+G V++SG+GKSGH+G+K++ATLASTGTP+FF+HPAEA HGDLGMI
Sbjct 45 YQRVLNLIMNCKGHVILSGMGKSGHVGRKMSATLASTGTPSFFIHPAEAFHGDLGMITPY 104
Query 78 DVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMH 137
D+++ IS SG E+ ++P L++ ++A+T S L A AVL++ + E CP +
Sbjct 105 DLLILISASGETDEILKLVPSLKNFGNRIIAITNNGNSTLAKNADAVLELHMANETCPNN 164
Query 138 LAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIP 197
LAPT+ST T+ +GDALA+A++ R F DFAR HP G+LG RLL +V +M+ D +P
Sbjct 165 LAPTTSTTLTMAIGDALAIAMIHQRKFMPNDFARYHPGGSLGRRLLTRVADVMQHD--VP 222
Query 198 QVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGALTT-PVNEAM 256
V L AS + ++ G+V V DA+ + G+ TDGDLRR++ +LT+ + M
Sbjct 223 AVQLDASFKTVIQRITSGCQGMVMVEDAEGGLAGIITDGDLRRFMEKEDSLTSATAAQMM 282
Query 257 TVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQD 301
T TL + I+A+E + K +++ V ++ K+TG + + D
Sbjct 283 TREPLTLPEDTMIIEAEEKMQKHRVSTLLVTNKANKVTGLVRIFD 327
>P42502 Arabinose 5-phosphate isomerase KpsF [Escherichia coli]
Length=317
Score = 218 bits (556), Expect = 6e-73
Identities = 119/276 (43%), Positives = 178/276 (64%), Gaps = 4/276 (1%)
Query 18 FVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESR 77
+ R N+I++C+G V++SG+GKSGH+G+K++ATLASTGTP+FF+HPAEA HGDLGMI
Sbjct 45 YQRVLNLIMNCKGHVILSGMGKSGHVGRKMSATLASTGTPSFFIHPAEAFHGDLGMITPY 104
Query 78 DVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMH 137
D+++ IS SG E+ ++P L++ ++A+T S L A AVL++ + E CP +
Sbjct 105 DLLILISASGETDEILKLVPSLKNFGNRIIAITNNGNSTLAKNADAVLELHMANETCPNN 164
Query 138 LAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIP 197
LAPT+ST T+ +GDALA+A+++ R F DFAR HP G+LG RLL +V +M+ D +P
Sbjct 165 LAPTTSTTLTMAIGDALAIAMIRQRKFMPNDFARYHPGGSLGRRLLTRVADVMQHD--VP 222
Query 198 QVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGALTT-PVNEAM 256
V L AS + ++ G+V V DA+ + G+ TDGDLRR++ +LT+ + M
Sbjct 223 AVQLDASFKTVIQRITSGCQGMVMVEDAEGGLAGIITDGDLRRFMEKEDSLTSATAAQMM 282
Query 257 TVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGK 292
T TL + I+A+E + K K + D+ GK
Sbjct 283 TREPLTLPEDTMIIEAEEKMQKDKCLNV-IGDQQGK 317
>P50100 Uncharacterized protein MK0525 [Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)]
Length=196
Score = 46.6 bits (109), Expect = 2e-09
Identities = 26/105 (25%), Positives = 53/105 (50%), Gaps = 2/105 (2%)
Query 202 TASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGALTTPV--NEAMTVG 259
T + ++ ++ G+G V + + + + G+ T+ DL +V G V + M+
Sbjct 20 TETAVEIAYKMREHGIGSVVIVNEKDEPIGIITERDLVIKVVSQGKNPDEVIARDIMSQP 79
Query 260 GTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQ 304
T++ +A ++++ + I P+VD+NGKL G + +QD Q
Sbjct 80 VITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDILQ 124
>P37767 Uncharacterized HTH-type transcriptional regulator YfhH
[Escherichia coli (strain K12)]
Length=282
Score = 43.9 bits (102), Expect = 3e-08
Identities = 38/136 (28%), Positives = 63/136 (46%), Gaps = 2/136 (1%)
Query 25 ILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFIS 84
+L +++++GIG SG + + A L G A V AL + D++L IS
Sbjct 128 MLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAIS 187
Query 85 YSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSST 144
Y+G +EL+L + +LA+TG + L A L E +A + A S+
Sbjct 188 YTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQA--TNSASISAC 245
Query 145 VNTLMMGDALAMAVMQ 160
M+ D L +A++Q
Sbjct 246 HAQGMLTDLLFIALIQ 261
Score = 19.2 bits (38), Expect = 2.1
Identities = 15/63 (24%), Positives = 26/63 (41%), Gaps = 0/63 (0%)
Query 5 QEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPA 64
Q ++ ++L D + + H + + + G S K A L G PA + +
Sbjct 12 QGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALS 71
Query 65 EAL 67
EAL
Sbjct 72 EAL 74
>P9WKI7 Inosine-5'-monophosphate dehydrogenase [Mycobacterium
tuberculosis (strain ATCC 25618 / H37Rv)]
Length=529
Score = 37.4 bits (85), Expect = 5e-06
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 7/150 (5%)
Query 153 ALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLEL 212
A+AMA G + + AG + ++ + M D + T + +DA+
Sbjct 94 AIAMARAGGMGVLHRNLPVAEQAGQV--EMVKRSEAGMVTDPVTCRPDNTLAQVDALC-- 149
Query 213 SRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDA 272
+R + + V D + G+ T+ D+R + + + +A + T Q A A
Sbjct 150 ARFRISGLPVVDDDGALVGIITNRDMRFEVDQSKQVAEVMTKAPLI---TAQEGVSASAA 206
Query 273 KEILMKRKITAAPVVDENGKLTGAINLQDF 302
+L + KI PVVD G+LTG I ++DF
Sbjct 207 LGLLRRNKIEKLPVVDGRGRLTGLITVKDF 236
Score = 17.7 bits (34), Expect = 6.9
Identities = 6/21 (29%), Positives = 14/21 (67%), Gaps = 0/21 (0%)
Query 203 ASVMDAMLELSRTGLGLVAVC 223
A+++DA + + G+G ++C
Sbjct 321 AALVDAGADAVKVGVGPGSIC 341
Lambda K H a alpha
0.321 0.136 0.386 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1316026
Database: 9eea958c67763483e4a2a669818d0c39.SwissProt.fasta
Posted date: May 31, 2024 3:15 AM
Number of letters in database: 5,869
Number of sequences in database: 18
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
