BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 2b47d3a81920eff50c01096aa427a532.SwissProt.fasta
16 sequences; 2,281 total letters
Query= Z2948
Length=143
Score E
Sequences producing significant alignments: (Bits) Value
Q8X560 Universal stress protein C [Escherichia coli O157:H7] 280 1e-102
Q8FGN7 Universal stress protein C [Escherichia coli O6:H1 (strain... 275 9e-101
P46888 Universal stress protein C [Escherichia coli (strain K12)] 274 3e-100
Q9RM66 Universal stress protein C [Salmonella typhimurium (strain... 220 4e-79
Q8Z5U4 Universal stress protein C [Salmonella typhi] 196 1e-69
Q8ZA49 Universal stress protein A [Yersinia pestis] 107 2e-34
Q8ZLD7 Universal stress protein A [Salmonella typhimurium (strain... 103 6e-33
P0AED4 Universal stress protein A [Shigella sonnei] 103 9e-33
P0AED3 Universal stress protein A [Shigella flexneri] 103 9e-33
P0AED1 Universal stress protein A [Escherichia coli O6:H1 (strain... 103 9e-33
P0AED0 Universal stress protein A [Escherichia coli (strain K12)] 103 9e-33
P0AED2 Universal stress protein A [Escherichia coli O157:H7] 103 9e-33
Q8Z268 Universal stress protein A [Salmonella typhi] 102 3e-32
P60004 Universal stress protein A [Photorhabdus laumondii subsp. ... 100 7e-32
P0AAB8 Universal stress protein D [Escherichia coli (strain K12)] 77.4 1e-22
P44880 Universal stress protein A homolog [Haemophilus influenzae... 70.9 3e-20
>Q8X560 Universal stress protein C [Escherichia coli O157:H7]
Length=142
Score = 280 bits (715), Expect = 1e-102
Identities = 142/142 (100%), Positives = 142/142 (100%), Gaps = 0/142 (0%)
Query 1 MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPEMYNQLAAPMLEDLRSV 60
MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPEMYNQLAAPMLEDLRSV
Sbjct 1 MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPEMYNQLAAPMLEDLRSV 60
Query 61 MQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCRKYHFDLVICGNHNHSFFSRAS 120
MQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCRKYHFDLVICGNHNHSFFSRAS
Sbjct 61 MQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCRKYHFDLVICGNHNHSFFSRAS 120
Query 121 CSAKRVIASSEVDVLLVPLTGD 142
CSAKRVIASSEVDVLLVPLTGD
Sbjct 121 CSAKRVIASSEVDVLLVPLTGD 142
>Q8FGN7 Universal stress protein C [Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC)]
Length=142
Score = 275 bits (703), Expect = 9e-101
Identities = 139/142 (98%), Positives = 141/142 (99%), Gaps = 0/142 (0%)
Query 1 MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPEMYNQLAAPMLEDLRSV 60
MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPEMYNQLAAPMLEDLR+V
Sbjct 1 MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPEMYNQLAAPMLEDLRNV 60
Query 61 MQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCRKYHFDLVICGNHNHSFFSRAS 120
MQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCRK+HFDLVICGNHNHSFFSRAS
Sbjct 61 MQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCRKHHFDLVICGNHNHSFFSRAS 120
Query 121 CSAKRVIASSEVDVLLVPLTGD 142
CSAKRVI SSEVDVLLVPLTGD
Sbjct 121 CSAKRVITSSEVDVLLVPLTGD 142
>P46888 Universal stress protein C [Escherichia coli (strain K12)]
Length=142
Score = 274 bits (700), Expect = 3e-100
Identities = 139/142 (98%), Positives = 140/142 (99%), Gaps = 0/142 (0%)
Query 1 MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPEMYNQLAAPMLEDLRSV 60
MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPEMYNQLAAPMLEDLRSV
Sbjct 1 MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPEMYNQLAAPMLEDLRSV 60
Query 61 MQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCRKYHFDLVICGNHNHSFFSRAS 120
M EETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVC K+HFDLVICGNHNHSFFSRAS
Sbjct 61 MHEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCHKHHFDLVICGNHNHSFFSRAS 120
Query 121 CSAKRVIASSEVDVLLVPLTGD 142
CSAKRVIASSEVDVLLVPLTGD
Sbjct 121 CSAKRVIASSEVDVLLVPLTGD 142
>Q9RM66 Universal stress protein C [Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720)]
Length=142
Score = 220 bits (561), Expect = 4e-79
Identities = 108/142 (76%), Positives = 127/142 (89%), Gaps = 0/142 (0%)
Query 1 MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPEMYNQLAAPMLEDLRSV 60
MSY++ILVAVAVTPES QLLAKAVSIARPV+ +SLITLASDPE+YNQ AAPM+EDLR+V
Sbjct 1 MSYTHILVAVAVTPESHQLLAKAVSIARPVQAKVSLITLASDPELYNQFAAPMMEDLRAV 60
Query 61 MQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCRKYHFDLVICGNHNHSFFSRAS 120
M EET++FL L + A YP+++TFIA GELS+HIL VCRK+H DLVICGNHNHSFFSRAS
Sbjct 61 MHEETENFLKMLGEKADYPIEQTFIASGELSQHILAVCRKHHVDLVICGNHNHSFFSRAS 120
Query 121 CSAKRVIASSEVDVLLVPLTGD 142
CSAK V+++S+VDVLLVPL GD
Sbjct 121 CSAKSVVSASQVDVLLVPLAGD 142
>Q8Z5U4 Universal stress protein C [Salmonella typhi]
Length=131
Score = 196 bits (498), Expect = 1e-69
Identities = 96/124 (77%), Positives = 111/124 (90%), Gaps = 0/124 (0%)
Query 1 MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPEMYNQLAAPMLEDLRSV 60
MSY++ILVAVAVTPES QLLAKAVSIARPV+ +SLITLASDPE+YNQ AAPM+EDLR+V
Sbjct 1 MSYTHILVAVAVTPESHQLLAKAVSIARPVQAKVSLITLASDPELYNQFAAPMMEDLRAV 60
Query 61 MQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCRKYHFDLVICGNHNHSFFSRAS 120
M EET++FL L + A YP+++TFIA GELS+HIL VCRK+H DLVICGNHNHSFFSRAS
Sbjct 61 MHEETENFLKMLGEKADYPIEQTFIASGELSQHILAVCRKHHVDLVICGNHNHSFFSRAS 120
Query 121 CSAK 124
CSAK
Sbjct 121 CSAK 124
>Q8ZA49 Universal stress protein A [Yersinia pestis]
Length=148
Score = 107 bits (268), Expect = 2e-34
Identities = 57/143 (40%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query 1 MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITL-ASDPEMYNQLAAPMLEDLRS 59
M+Y +IL+AV ++PES+ L+ KAVS+A+P +SLI + + ++Y L L D++
Sbjct 1 MAYKHILIAVDLSPESKVLVEKAVSMAKPYNAKVSLIHVDVNYSDLYTGLIDVNLGDMQK 60
Query 60 VMQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCRKYHFDLVICGNHNHSFFSRA 119
+ EET + L +L Q+AGYPV++T G+L + +++ +KY DLV+CG H+ F+S+
Sbjct 61 RISEETHNALTELSQNAGYPVEQTLSGSGDLGQVLVDAIKKYDIDLVLCG-HHQDFWSKL 119
Query 120 SCSAKRVIASSEVDVLLVPLTGD 142
SA+++I + VD+L+VPL D
Sbjct 120 MSSARQLINTVHVDMLIVPLRDD 142
>Q8ZLD7 Universal stress protein A [Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720)]
Length=144
Score = 103 bits (257), Expect = 6e-33
Identities = 56/140 (40%), Positives = 91/140 (65%), Gaps = 2/140 (1%)
Query 1 MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITL-ASDPEMYNQLAAPMLEDLRS 59
M+Y +IL+AV ++PES+ L+ KAVS+ARP ISLI + + ++Y L L D++
Sbjct 1 MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKISLIHVDVNYSDLYTGLIDVNLGDMQK 60
Query 60 VMQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCRKYHFDLVICGNHNHSFFSRA 119
+ EET L +L +AGYP+ +T G+L + +++ +KY DLV+CG H+ F+S+
Sbjct 61 RISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCG-HHQDFWSKL 119
Query 120 SCSAKRVIASSEVDVLLVPL 139
SA+++I + VD+L+VPL
Sbjct 120 MSSARQLINTVHVDMLIVPL 139
>P0AED4 Universal stress protein A [Shigella sonnei]
Length=144
Score = 103 bits (256), Expect = 9e-33
Identities = 55/140 (39%), Positives = 91/140 (65%), Gaps = 2/140 (1%)
Query 1 MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITL-ASDPEMYNQLAAPMLEDLRS 59
M+Y +IL+AV ++PES+ L+ KAVS+ARP +SLI + + ++Y L L D++
Sbjct 1 MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYSDLYTGLIDVNLGDMQK 60
Query 60 VMQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCRKYHFDLVICGNHNHSFFSRA 119
+ EET L +L +AGYP+ +T G+L + +++ +KY DLV+CG H+ F+S+
Sbjct 61 RISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCG-HHQDFWSKL 119
Query 120 SCSAKRVIASSEVDVLLVPL 139
SA+++I + VD+L+VPL
Sbjct 120 MSSARQLINTVHVDMLIVPL 139
>P0AED3 Universal stress protein A [Shigella flexneri]
Length=144
Score = 103 bits (256), Expect = 9e-33
Identities = 55/140 (39%), Positives = 91/140 (65%), Gaps = 2/140 (1%)
Query 1 MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITL-ASDPEMYNQLAAPMLEDLRS 59
M+Y +IL+AV ++PES+ L+ KAVS+ARP +SLI + + ++Y L L D++
Sbjct 1 MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYSDLYTGLIDVNLGDMQK 60
Query 60 VMQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCRKYHFDLVICGNHNHSFFSRA 119
+ EET L +L +AGYP+ +T G+L + +++ +KY DLV+CG H+ F+S+
Sbjct 61 RISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCG-HHQDFWSKL 119
Query 120 SCSAKRVIASSEVDVLLVPL 139
SA+++I + VD+L+VPL
Sbjct 120 MSSARQLINTVHVDMLIVPL 139
>P0AED1 Universal stress protein A [Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC)]
Length=144
Score = 103 bits (256), Expect = 9e-33
Identities = 55/140 (39%), Positives = 91/140 (65%), Gaps = 2/140 (1%)
Query 1 MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITL-ASDPEMYNQLAAPMLEDLRS 59
M+Y +IL+AV ++PES+ L+ KAVS+ARP +SLI + + ++Y L L D++
Sbjct 1 MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYSDLYTGLIDVNLGDMQK 60
Query 60 VMQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCRKYHFDLVICGNHNHSFFSRA 119
+ EET L +L +AGYP+ +T G+L + +++ +KY DLV+CG H+ F+S+
Sbjct 61 RISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCG-HHQDFWSKL 119
Query 120 SCSAKRVIASSEVDVLLVPL 139
SA+++I + VD+L+VPL
Sbjct 120 MSSARQLINTVHVDMLIVPL 139
>P0AED0 Universal stress protein A [Escherichia coli (strain K12)]
Length=144
Score = 103 bits (256), Expect = 9e-33
Identities = 55/140 (39%), Positives = 91/140 (65%), Gaps = 2/140 (1%)
Query 1 MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITL-ASDPEMYNQLAAPMLEDLRS 59
M+Y +IL+AV ++PES+ L+ KAVS+ARP +SLI + + ++Y L L D++
Sbjct 1 MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYSDLYTGLIDVNLGDMQK 60
Query 60 VMQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCRKYHFDLVICGNHNHSFFSRA 119
+ EET L +L +AGYP+ +T G+L + +++ +KY DLV+CG H+ F+S+
Sbjct 61 RISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCG-HHQDFWSKL 119
Query 120 SCSAKRVIASSEVDVLLVPL 139
SA+++I + VD+L+VPL
Sbjct 120 MSSARQLINTVHVDMLIVPL 139
>P0AED2 Universal stress protein A [Escherichia coli O157:H7]
Length=144
Score = 103 bits (256), Expect = 9e-33
Identities = 55/140 (39%), Positives = 91/140 (65%), Gaps = 2/140 (1%)
Query 1 MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITL-ASDPEMYNQLAAPMLEDLRS 59
M+Y +IL+AV ++PES+ L+ KAVS+ARP +SLI + + ++Y L L D++
Sbjct 1 MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYSDLYTGLIDVNLGDMQK 60
Query 60 VMQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCRKYHFDLVICGNHNHSFFSRA 119
+ EET L +L +AGYP+ +T G+L + +++ +KY DLV+CG H+ F+S+
Sbjct 61 RISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCG-HHQDFWSKL 119
Query 120 SCSAKRVIASSEVDVLLVPL 139
SA+++I + VD+L+VPL
Sbjct 120 MSSARQLINTVHVDMLIVPL 139
>Q8Z268 Universal stress protein A [Salmonella typhi]
Length=144
Score = 102 bits (253), Expect = 3e-32
Identities = 55/140 (39%), Positives = 91/140 (65%), Gaps = 2/140 (1%)
Query 1 MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITL-ASDPEMYNQLAAPMLEDLRS 59
M+Y +IL+AV ++PES+ L+ KAVS+ARP ISLI + + ++Y L L D++
Sbjct 1 MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKISLIHVDVNYSDLYTGLIDVNLGDMQK 60
Query 60 VMQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCRKYHFDLVICGNHNHSFFSRA 119
+ +ET L +L +AGYP+ +T G+L + +++ +KY DLV+CG H+ F+S+
Sbjct 61 RISKETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCG-HHQDFWSKL 119
Query 120 SCSAKRVIASSEVDVLLVPL 139
SA+++I + VD+L+VPL
Sbjct 120 MSSARQLINTVHVDMLIVPL 139
>P60004 Universal stress protein A [Photorhabdus laumondii subsp.
laumondii (strain DSM 15139 / CIP 105565 / TT01)]
Length=143
Score = 100 bits (250), Expect = 7e-32
Identities = 55/143 (38%), Positives = 91/143 (64%), Gaps = 2/143 (1%)
Query 1 MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITL-ASDPEMYNQLAAPMLEDLRS 59
M+Y +ILVAV ++PESQ L+ KAVS+A+P +SLI + + ++Y L L D++
Sbjct 1 MAYKHILVAVDLSPESQVLVRKAVSMAKPDNAKVSLIHVDVNYSDLYTGLIDVNLGDMQQ 60
Query 60 VMQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCRKYHFDLVICGNHNHSFFSRA 119
+ EET+S L L D+ Y + +T G+L + +++ +KY D+V+CG H+ F+S+
Sbjct 61 RISEETRSALKALSADSAYDIQETLSGSGDLGQVLVDAIKKYGIDMVVCG-HHQDFWSKL 119
Query 120 SCSAKRVIASSEVDVLLVPLTGD 142
SA+++I + VD+L+VPL D
Sbjct 120 MSSARQLINTVHVDMLIVPLRDD 142
>P0AAB8 Universal stress protein D [Escherichia coli (strain K12)]
Length=142
Score = 77.4 bits (189), Expect = 1e-22
Identities = 45/139 (32%), Positives = 80/139 (58%), Gaps = 2/139 (1%)
Query 1 MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASD-PEMYNQLAAPMLEDLRS 59
M+Y +I VA++ E L+ KA+ +AR H++LI + E+Y + P ED+
Sbjct 1 MAYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLSELYPGIYFPATEDILQ 60
Query 60 VMQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCRKYHFDLVICGNHNHSFFSRA 119
+++ ++ + L KL ++ +P K I GE+ E +LE+ +K DL++CG H+HSF +R
Sbjct 61 LLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQKEQCDLLVCG-HHHSFINRL 119
Query 120 SCSAKRVIASSEVDVLLVP 138
+ + +I D+L+VP
Sbjct 120 MPAYRGMINKMSADLLIVP 138
>P44880 Universal stress protein A homolog [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=141
Score = 70.9 bits (172), Expect = 3e-20
Identities = 42/138 (30%), Positives = 77/138 (56%), Gaps = 2/138 (1%)
Query 3 YSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITL-ASDPEMYNQLAAPMLEDLRSVM 61
Y +ILVAV ++ ES LL KAV IA+ +S+I + + ++Y L + ++ +
Sbjct 2 YKHILVAVDLSEESPILLKKAVGIAKRHDAKLSIIHVDVNFSDLYTGLIDVNMSSMQDRI 61
Query 62 QEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCRKYHFDLVICGNHNHSFFSRASC 121
ETQ L L + YP+ + G+L + + + +Y DL++ G H+ F+S+
Sbjct 62 STETQKALLDLAESVDYPISEKLSGSGDLGQVLSDAIEQYDVDLLVTG-HHQDFWSKLMS 120
Query 122 SAKRVIASSEVDVLLVPL 139
S ++V+ + ++D+L+VPL
Sbjct 121 STRQVMNTIKIDMLVVPL 138
Lambda K H a alpha
0.324 0.136 0.389 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 192830
Database: 2b47d3a81920eff50c01096aa427a532.SwissProt.fasta
Posted date: Jun 1, 2024 3:43 AM
Number of letters in database: 2,281
Number of sequences in database: 16
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
