BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 78961058da5d7d89391b48d72473b114.SwissProt.fasta
           4 sequences; 272 total letters



Query= Z2132

Length=47
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P68655 P21 prophage-derived head-stabilizing protein [Escherichia...  87.4    5e-30
P68656 Head completion protein gp3 [Enterobacteria phage P21]         87.4    5e-30
P68659 Lambda prophage-derived head-to-tail joining protein W [Es...  47.4    4e-14
P68660 Head completion protein [Escherichia phage lambda]             47.4    4e-14


>P68655 P21 prophage-derived head-stabilizing protein [Escherichia 
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=68

 Score = 87.4 bits (215),  Expect = 5e-30
 Identities = 45/46 (98%), Positives = 45/46 (98%), Gaps = 0/46 (0%)

Query  1   VVSVQKDGRRIEYTAASLDELNRAINDAESVLGTTRRRRRPLGVRL  46
           VVSVQKDGRRIEYTAASLDELNRAINDAESVLGTTR RRRPLGVRL
Sbjct  23  VVSVQKDGRRIEYTAASLDELNRAINDAESVLGTTRCRRRPLGVRL  68


>P68656 Head completion protein gp3 [Enterobacteria phage P21]
Length=68

 Score = 87.4 bits (215),  Expect = 5e-30
 Identities = 45/46 (98%), Positives = 45/46 (98%), Gaps = 0/46 (0%)

Query  1   VVSVQKDGRRIEYTAASLDELNRAINDAESVLGTTRRRRRPLGVRL  46
           VVSVQKDGRRIEYTAASLDELNRAINDAESVLGTTR RRRPLGVRL
Sbjct  23  VVSVQKDGRRIEYTAASLDELNRAINDAESVLGTTRCRRRPLGVRL  68


>P68659 Lambda prophage-derived head-to-tail joining protein W 
[Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=68

 Score = 47.4 bits (111),  Expect = 4e-14
 Identities = 22/43 (51%), Positives = 30/43 (70%), Gaps = 0/43 (0%)

Query  1   VVSVQKDGRRIEYTAASLDELNRAINDAESVLGTTRRRRRPLG  43
           V +VQKDGRR+E+TA S+ +L + I + E   G T+RRR P G
Sbjct  23  VATVQKDGRRVEFTATSVSDLKKYIAELEVQTGMTQRRRGPAG  65


>P68660 Head completion protein [Escherichia phage lambda]
Length=68

 Score = 47.4 bits (111),  Expect = 4e-14
 Identities = 22/43 (51%), Positives = 30/43 (70%), Gaps = 0/43 (0%)

Query  1   VVSVQKDGRRIEYTAASLDELNRAINDAESVLGTTRRRRRPLG  43
           V +VQKDGRR+E+TA S+ +L + I + E   G T+RRR P G
Sbjct  23  VATVQKDGRRVEFTATSVSDLKKYIAELEVQTGMTQRRRGPAG  65



Lambda      K        H        a         alpha
   0.332    0.144    0.399    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 8208


  Database: 78961058da5d7d89391b48d72473b114.SwissProt.fasta
    Posted date:  Jun 1, 2024  2:10 AM
  Number of letters in database: 272
  Number of sequences in database:  4



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40