BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: f211b59d29f7c723b5ff2a61304de01e.TrEMBL.fasta
2 sequences; 122 total letters
Query= ACIAD3660
Length=62
Score E
Sequences producing significant alignments: (Bits) Value
A0A7G2SGC2 Uncharacterized protein [Acinetobacter sp] 128 3e-46
Q6F6M8 Uncharacterized protein [Acinetobacter baylyi (strain ATCC... 128 3e-46
>A0A7G2SGC2 Uncharacterized protein [Acinetobacter sp]
Length=61
Score = 128 bits (321), Expect = 3e-46
Identities = 61/61 (100%), Positives = 61/61 (100%), Gaps = 0/61 (0%)
Query 1 MMPCQKFPETLSVNADNVLSEFSKNFGDAEKRRYNVAIIHVLLGVSRDIPSFLLFTLWKC 60
MMPCQKFPETLSVNADNVLSEFSKNFGDAEKRRYNVAIIHVLLGVSRDIPSFLLFTLWKC
Sbjct 1 MMPCQKFPETLSVNADNVLSEFSKNFGDAEKRRYNVAIIHVLLGVSRDIPSFLLFTLWKC 60
Query 61 Q 61
Q
Sbjct 61 Q 61
>Q6F6M8 Uncharacterized protein [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=61
Score = 128 bits (321), Expect = 3e-46
Identities = 61/61 (100%), Positives = 61/61 (100%), Gaps = 0/61 (0%)
Query 1 MMPCQKFPETLSVNADNVLSEFSKNFGDAEKRRYNVAIIHVLLGVSRDIPSFLLFTLWKC 60
MMPCQKFPETLSVNADNVLSEFSKNFGDAEKRRYNVAIIHVLLGVSRDIPSFLLFTLWKC
Sbjct 1 MMPCQKFPETLSVNADNVLSEFSKNFGDAEKRRYNVAIIHVLLGVSRDIPSFLLFTLWKC 60
Query 61 Q 61
Q
Sbjct 61 Q 61
Lambda K H a alpha
0.334 0.144 0.463 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 5724
Database: f211b59d29f7c723b5ff2a61304de01e.TrEMBL.fasta
Posted date: May 9, 2024 4:11 PM
Number of letters in database: 122
Number of sequences in database: 2
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40