BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 345679e8a6c93e850f8a43c158a7d140.SwissProt.fasta
30 sequences; 12,024 total letters
Query= ACIAD3625
Length=370
Score E
Sequences producing significant alignments: (Bits) Value
B4T9U0 Multidrug resistance protein MdtA [Salmonella heidelberg (... 111 3e-30
Q8ZNQ3 Multidrug resistance protein MdtA [Salmonella typhimurium ... 109 1e-29
Q8Z5F8 Multidrug resistance protein MdtA [Salmonella typhi] 109 1e-29
C0Q1F4 Multidrug resistance protein MdtA [Salmonella paratyphi C ... 109 1e-29
A4WCC0 Multidrug resistance protein MdtA [Enterobacter sp. (strai... 106 1e-28
B7NCB0 Multidrug resistance protein MdtA [Escherichia coli O17:K5... 106 1e-28
A6TBH3 Multidrug resistance protein MdtA [Klebsiella pneumoniae s... 105 2e-28
A8A1U6 Multidrug resistance protein MdtA [Escherichia coli O9:H4 ... 105 2e-28
B1X7H0 Multidrug resistance protein MdtA [Escherichia coli (strai... 105 2e-28
C4ZSG2 Multidrug resistance protein MdtA [Escherichia coli (strai... 105 2e-28
B7UTB2 Multidrug resistance protein MdtA [Escherichia coli O127:H... 105 2e-28
P76397 Multidrug resistance protein MdtA [Escherichia coli (strai... 105 2e-28
Q6D2B2 Multidrug resistance protein MdtA [Pectobacterium atrosept... 105 3e-28
B4EY99 Multidrug resistance protein MdtA [Proteus mirabilis (stra... 104 6e-28
B7M457 Multidrug resistance protein MdtA [Escherichia coli O8 (st... 104 6e-28
B7MWY7 Multidrug resistance protein MdtA [Escherichia coli O81 (s... 104 6e-28
A7ZNP7 Multidrug resistance protein MdtA [Escherichia coli O139:H... 104 6e-28
B7ME86 Multidrug resistance protein MdtA [Escherichia coli O45:K1... 104 6e-28
P75830 Macrolide export protein MacA [Escherichia coli (strain K12)] 98.6 5e-26
O31099 Solvent efflux pump periplasmic linker SrpA [Pseudomonas p... 82.0 3e-20
Q93PU5 Toluene efflux pump periplasmic linker protein TtgG [Pseud... 82.0 3e-20
Q9KWV5 Toluene efflux pump periplasmic linker protein TtgD [Pseud... 79.0 3e-19
Q849Q9 Probable efflux pump periplasmic linker protein SepA [Pseu... 79.0 3e-19
Q8FWV8 Efflux pump periplasmic linker BepF [Brucella suis biovar ... 72.8 4e-17
P0AE06 Multidrug efflux pump subunit AcrA [Escherichia coli (stra... 71.6 1e-16
Q9L9D4 UPF0194 membrane protein in asrC 5'region [Acidithiobacill... 70.9 1e-16
Q9WWZ9 Toluene efflux pump periplasmic linker protein TtgA [Pseud... 66.2 6e-15
Q88N30 Probable efflux pump periplasmic linker TtgA [Pseudomonas ... 66.2 6e-15
P0C069 Multidrug/solvent efflux pump periplasmic linker protein M... 66.2 6e-15
Q9KJC3 Antibiotic efflux pump periplasmic linker protein ArpA [Ps... 64.3 2e-14
>B4T9U0 Multidrug resistance protein MdtA [Salmonella heidelberg
(strain SL476)]
Length=413
Score = 111 bits (277), Expect = 3e-30
Identities = 79/336 (24%), Positives = 151/336 (45%), Gaps = 15/336 (4%)
Query 32 APLVMVAQPQSSQSQAQSYAGKVQARQQTALSFRVGGQIIERLVEVGDRVHVGQVLAKLD 91
AP+ + + S G V A + RV GQ+I + G +V+ G +LA++D
Sbjct 59 APVQAATATTQAVPRYLSGLGTVTAANTVTVRSRVDGQLIALHFQEGQQVNAGDLLAQID 118
Query 92 VQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRSQYDAIKNQYDAAQSSL 151
++ L A+ QL + A +L RYQQL N VSR + DA + + Q ++
Sbjct 119 PSQFKVALAQAQGQLAKDNATLANARRDLARYQQLAKTNLVSRQELDAQQALVNETQGTI 178
Query 152 KQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTAYQLAIDGDR--EVVIG 209
K +N A Q +++R+ A +G + + ++VG +++ TA + I +++
Sbjct 179 KADEANVASAQLQLDWSRITAPVSGRVGLKQVDVGNQISSSDTAGIVVITQTHPIDLIFT 238
Query 210 LPEQSISSV----KVGQPAWMSLWSQ------PEQKFAAYVREIAPAADQSRTFSVKVAL 259
LPE I++V K G+ + W + E + +I P + T +K
Sbjct 239 LPESDIATVVQAQKAGKTLVVEAWDRTNSHKLSEGVLLSLDNQIDPT---TGTIKIKARF 295
Query 260 KQAQPSIQMGQSARVFLNATPQQSQLSIPMSSISATKQQPYVWIVKPNNTIQKVNVQLGA 319
++ Q + +Q+ + +P +++ + +VW++ N + K+ V++G
Sbjct 296 TNQDDTLFPNQFVNARMLVDTEQNAVVVPAAAVQMGNEGHFVWVLNDENNVSKMRVKIGI 355
Query 320 YGRDEVTILSGLKSSDWVVVGGVHLLRDQQKIRPID 355
V I +GL + D VV G+ L + K+ ++
Sbjct 356 QDNQNVVISAGLSAGDRVVTDGIDRLTEGAKVEVVE 391
>Q8ZNQ3 Multidrug resistance protein MdtA [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=413
Score = 109 bits (272), Expect = 1e-29
Identities = 79/336 (24%), Positives = 150/336 (45%), Gaps = 15/336 (4%)
Query 32 APLVMVAQPQSSQSQAQSYAGKVQARQQTALSFRVGGQIIERLVEVGDRVHVGQVLAKLD 91
AP+ + + S G V A + RV GQ+I + G +V+ G +LA++D
Sbjct 59 APVQAATATTQAVPRYLSGLGTVTAANTVTVRSRVDGQLIALHFQEGQQVNAGDLLAQID 118
Query 92 VQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRSQYDAIKNQYDAAQSSL 151
++ L A+ QL + A +L RYQQL N VSR + DA + + Q ++
Sbjct 119 PSQFKVALAQAQGQLAKDNATLANARRDLARYQQLAKTNLVSRQELDAQQALVNETQGTI 178
Query 152 KQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTAYQLAIDGDR--EVVIG 209
K +N A Q +++R+ A +G + + ++VG +++ TA + I +++
Sbjct 179 KADEANVASAQLQLDWSRITAPVSGRVGLKQVDVGNQISSSDTAGIVVITQTHPIDLIFT 238
Query 210 LPEQSISSV----KVGQPAWMSLWSQ------PEQKFAAYVREIAPAADQSRTFSVKVAL 259
LPE I++V K G+ + W + E + +I P + T +K
Sbjct 239 LPESDIATVVQAQKAGKALVVEAWDRTNSHKLSEGVLLSLDNQIDPT---TGTIKIKARF 295
Query 260 KQAQPSIQMGQSARVFLNATPQQSQLSIPMSSISATKQQPYVWIVKPNNTIQKVNVQLGA 319
++ Q + +Q+ + +P +++ + +VW++ N + K V++G
Sbjct 296 TNQDDTLFPNQFVNARMLVDTEQNAVVVPAAAVQMGNEGHFVWVLNDENNVSKKRVKIGI 355
Query 320 YGRDEVTILSGLKSSDWVVVGGVHLLRDQQKIRPID 355
V I +GL + D VV G+ L + K+ ++
Sbjct 356 QDNRNVVISAGLSAGDRVVTDGIDRLTEGAKVEVVE 391
>Q8Z5F8 Multidrug resistance protein MdtA [Salmonella typhi]
Length=413
Score = 109 bits (272), Expect = 1e-29
Identities = 79/336 (24%), Positives = 150/336 (45%), Gaps = 15/336 (4%)
Query 32 APLVMVAQPQSSQSQAQSYAGKVQARQQTALSFRVGGQIIERLVEVGDRVHVGQVLAKLD 91
AP+ + + S G V A + RV GQ+I + G +V+ G +LA++D
Sbjct 59 APVQAATATTQAVPRYLSGLGTVTAANTVTVRSRVDGQLIALHFQEGQQVNAGDLLAQID 118
Query 92 VQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRSQYDAIKNQYDAAQSSL 151
++ L A+ QL + A +L RYQQL N VSR + DA + + Q ++
Sbjct 119 PSQFKVALAQAQGQLAKDNATLANARRDLARYQQLAKTNLVSRQELDAQQALVNETQGTI 178
Query 152 KQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTAYQLAIDGDR--EVVIG 209
K +N A Q +++R+ A +G + + ++VG +++ TA + I +++
Sbjct 179 KADEANVASAQLQLDWSRITAPVSGRVGLKQVDVGNQISSSDTAGIVVITQTHPIDLIFT 238
Query 210 LPEQSISSV----KVGQPAWMSLWSQ------PEQKFAAYVREIAPAADQSRTFSVKVAL 259
LPE I++V K G+ + W + E + +I P + T +K
Sbjct 239 LPESDIATVVQAQKAGKTLVVEAWDRTNSHKLSEGVLLSLDNQIDPT---TGTIKIKARF 295
Query 260 KQAQPSIQMGQSARVFLNATPQQSQLSIPMSSISATKQQPYVWIVKPNNTIQKVNVQLGA 319
++ Q + +Q+ + +P +++ + +VW++ N + K V++G
Sbjct 296 TNQDDTLFPNQFVNARMLVDTEQNAVVVPAAAVQMGNEGHFVWVLNDENNVSKKRVKIGI 355
Query 320 YGRDEVTILSGLKSSDWVVVGGVHLLRDQQKIRPID 355
V I +GL + D VV G+ L + K+ ++
Sbjct 356 QDNRNVVISAGLSAGDRVVTDGIDRLTEGAKVEVVE 391
>C0Q1F4 Multidrug resistance protein MdtA [Salmonella paratyphi
C (strain RKS4594)]
Length=413
Score = 109 bits (272), Expect = 1e-29
Identities = 79/336 (24%), Positives = 150/336 (45%), Gaps = 15/336 (4%)
Query 32 APLVMVAQPQSSQSQAQSYAGKVQARQQTALSFRVGGQIIERLVEVGDRVHVGQVLAKLD 91
AP+ + + S G V A + RV GQ+I + G +V+ G +LA++D
Sbjct 59 APVQAATATTQAVPRYLSGLGTVTAANTVTVRSRVDGQLIALHFQEGQQVNAGDLLAQID 118
Query 92 VQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRSQYDAIKNQYDAAQSSL 151
++ L A+ QL + A +L RYQQL N VSR + DA + + Q ++
Sbjct 119 PSQFKVALAQAQGQLAKDNATLANARRDLARYQQLAKTNLVSRQELDAQQALVNETQGTI 178
Query 152 KQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTAYQLAIDGDR--EVVIG 209
K +N A Q +++R+ A +G + + ++VG +++ TA + I +++
Sbjct 179 KADEANVASAQLQLDWSRITAPVSGRVGLKQVDVGNQISSSDTAGIVVITQTHPIDLIFT 238
Query 210 LPEQSISSV----KVGQPAWMSLWSQ------PEQKFAAYVREIAPAADQSRTFSVKVAL 259
LPE I++V K G+ + W + E + +I P + T +K
Sbjct 239 LPESDIATVVQAQKAGKTLVVEAWDRTNSHKLSEGVLLSLDNQIDPT---TGTIKIKARF 295
Query 260 KQAQPSIQMGQSARVFLNATPQQSQLSIPMSSISATKQQPYVWIVKPNNTIQKVNVQLGA 319
++ Q + +Q+ + +P +++ + +VW++ N + K V++G
Sbjct 296 TNQDDTLFPNQFVNARMLVDTEQNAVVVPAAAVQMGNEGHFVWVLNDENNVSKKRVKIGI 355
Query 320 YGRDEVTILSGLKSSDWVVVGGVHLLRDQQKIRPID 355
V I +GL + D VV G+ L + K+ ++
Sbjct 356 QDNRNVVISAGLSAGDRVVTDGIDRLTEGAKVEVVE 391
>A4WCC0 Multidrug resistance protein MdtA [Enterobacter sp. (strain
638)]
Length=411
Score = 106 bits (265), Expect = 1e-28
Identities = 79/333 (24%), Positives = 151/333 (45%), Gaps = 9/333 (3%)
Query 32 APLVMVAQPQSSQSQAQSYAGKVQARQQTALSFRVGGQIIERLVEVGDRVHVGQVLAKLD 91
AP+ S + + G V A + RV GQ++ + G +V G +LA++D
Sbjct 56 APVQAATAVSKSVPRYLTGLGTVTAANTVTVRSRVDGQLMAIHFQEGQQVKAGDLLAEID 115
Query 92 VQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRSQYDAIKNQYDAAQSSL 151
++ L A+ QL ++ A +L RYQQL+ N VSR + D ++ AQ ++
Sbjct 116 PSQFKVALAQAQGQLAKDKATLANARRDLARYQQLVKTNLVSRQELDTQQSLVSEAQGTI 175
Query 152 KQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTAYQLAIDGDR--EVVIG 209
K + A Q +++R+ A +G + + +++G +++G T + I ++V
Sbjct 176 KTDEAAVASAQLQLDWSRITAPIDGRVGLKQVDIGNQISSGDTTGIVVITQTHPIDLVFT 235
Query 210 LPEQSISSV----KVGQPAWMSLWSQPEQKFAA--YVREIAPAADQSR-TFSVKVALKQA 262
LPE I++V K GQP + W + + + + + D + T VK
Sbjct 236 LPENEIATVVQAQKTGQPLAVEAWDRTNKAKLSDGTLLSLDNQIDATTGTIKVKARFNNQ 295
Query 263 QPSIQMGQSARVFLNATPQQSQLSIPMSSISATKQQPYVWIVKPNNTIQKVNVQLGAYGR 322
++ Q + +++ + IP +++ + +VW++ +N + K V+ G
Sbjct 296 DDALFPNQFVNARMLVATEENAVVIPTAALQMGNEGNFVWVLNSDNKVSKHLVKPGIQDS 355
Query 323 DEVTILSGLKSSDWVVVGGVHLLRDQQKIRPID 355
V I +GL + D VV G+ L + K+ +D
Sbjct 356 QTVVISAGLSAGDRVVTDGIDRLTEGAKVEVVD 388
>B7NCB0 Multidrug resistance protein MdtA [Escherichia coli O17:K52:H18
(strain UMN026 / ExPEC)]
Length=415
Score = 106 bits (265), Expect = 1e-28
Identities = 79/342 (23%), Positives = 152/342 (44%), Gaps = 12/342 (4%)
Query 29 LEQAPLVMVAQPQSSQSQAQSYA---GKVQARQQTALSFRVGGQIIERLVEVGDRVHVGQ 85
+ PL V + + Y G + A + RV GQ+I + G +V G
Sbjct 54 MRSGPLAPVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLIALHFQEGQQVKAGD 113
Query 86 VLAKLDVQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRSQYDAIKNQYD 145
+LA++D ++ L A+ QL ++ A +L RYQQL+ N VSR + DA +
Sbjct 114 LLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLARYQQLVKTNLVSRQELDAQQALVS 173
Query 146 AAQSSLKQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTAYQLAIDGDR- 204
+ ++K ++ A Q +++R+ A +G + + ++VG +++G T + I
Sbjct 174 ETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHP 233
Query 205 -EVVIGLPEQSISSV----KVGQPAWMSLWSQPEQK--FAAYVREIAPAADQSR-TFSVK 256
++V LPE I++V K G+P + W + K + + D + T VK
Sbjct 234 IDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVK 293
Query 257 VALKQAQPSIQMGQSARVFLNATPQQSQLSIPMSSISATKQQPYVWIVKPNNTIQKVNVQ 316
++ Q + +Q+ + IP +++ + +VW++ N + K V
Sbjct 294 ARFNNQDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVT 353
Query 317 LGAYGRDEVTILSGLKSSDWVVVGGVHLLRDQQKIRPIDREN 358
G +V I +G+ + D VV G+ L + K+ ++ ++
Sbjct 354 PGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVEAQS 395
>A6TBH3 Multidrug resistance protein MdtA [Klebsiella pneumoniae
subsp. pneumoniae (strain ATCC 700721 / MGH 78578)]
Length=412
Score = 105 bits (263), Expect = 2e-28
Identities = 81/334 (24%), Positives = 153/334 (46%), Gaps = 13/334 (4%)
Query 32 APLVMVAQPQSSQSQAQSYAGKVQARQQTALSFRVGGQIIERLVEVGDRVHVGQVLAKLD 91
AP+ + + + + G V A + RV GQ++ + G +V G +LA++D
Sbjct 59 APVQAATATEEAVPRYLTGLGTVTAANTVTVRSRVDGQLLSLHFQEGQQVKAGDLLAQID 118
Query 92 VQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRSQYDAIKNQYDAAQSSL 151
++ L A+ QL Q+ A +L RYQQL+ N VSR + D ++ + ++
Sbjct 119 PSQFKVALAQAQGQLAKDQATLANARRDLARYQQLVKTNLVSRQELDTQQSLVVESAGTV 178
Query 152 KQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTAYQLAIDGDR--EVVIG 209
K + A Q ++ R+ A +G + + +++G +++G T + + +VV
Sbjct 179 KADEAAVASAQLQLDWTRITAPIDGRVGLKQVDIGNQISSGDTTGIVVLTQTHPIDVVFT 238
Query 210 LPEQSISSV----KVGQPAWMSLWSQP-EQKFAAYVREIAPAADQ----SRTFSVKVALK 260
LPE SI++V K G+ + W + +QK + V E+ +Q + T +K
Sbjct 239 LPESSIATVVQAQKAGKALSVEAWDRTNKQKIS--VGELLSLDNQIDATTGTIKLKARFS 296
Query 261 QAQPSIQMGQSARVFLNATPQQSQLSIPMSSISATKQQPYVWIVKPNNTIQKVNVQLGAY 320
++ Q L QQ+ + IP +++ + +VW++ N + K +V G
Sbjct 297 NLDDALFPNQFVNARLLVDTQQNAVVIPAAALQMGNEGHFVWVLNDENKVSKHSVTPGIQ 356
Query 321 GRDEVTILSGLKSSDWVVVGGVHLLRDQQKIRPI 354
+V I +GL + D VV G+ L + K+ +
Sbjct 357 DSQKVVISAGLSAGDRVVTDGIDRLTEGAKVEVV 390
>A8A1U6 Multidrug resistance protein MdtA [Escherichia coli O9:H4
(strain HS)]
Length=415
Score = 105 bits (263), Expect = 2e-28
Identities = 79/342 (23%), Positives = 151/342 (44%), Gaps = 12/342 (4%)
Query 29 LEQAPLVMVAQPQSSQSQAQSYA---GKVQARQQTALSFRVGGQIIERLVEVGDRVHVGQ 85
+ PL V + + Y G + A + RV GQ+I + G +V G
Sbjct 54 MRSGPLAPVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLIALHFQEGQQVKAGD 113
Query 86 VLAKLDVQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRSQYDAIKNQYD 145
+LA++D ++ L A+ QL ++ A +L RYQQL N VSR + DA +
Sbjct 114 LLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVS 173
Query 146 AAQSSLKQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTAYQLAIDGDR- 204
+ ++K ++ A Q +++R+ A +G + + ++VG +++G T + I
Sbjct 174 ETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHP 233
Query 205 -EVVIGLPEQSISSV----KVGQPAWMSLWSQPEQK--FAAYVREIAPAADQSR-TFSVK 256
++V LPE I++V K G+P + W + K + + D + T VK
Sbjct 234 IDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVK 293
Query 257 VALKQAQPSIQMGQSARVFLNATPQQSQLSIPMSSISATKQQPYVWIVKPNNTIQKVNVQ 316
++ Q + +Q+ + IP +++ + +VW++ N + K V
Sbjct 294 ARFNNQDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVT 353
Query 317 LGAYGRDEVTILSGLKSSDWVVVGGVHLLRDQQKIRPIDREN 358
G +V I +G+ + D VV G+ L + K+ ++ ++
Sbjct 354 PGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVEAQS 395
>B1X7H0 Multidrug resistance protein MdtA [Escherichia coli (strain
K12 / DH10B)]
Length=415
Score = 105 bits (263), Expect = 2e-28
Identities = 79/342 (23%), Positives = 151/342 (44%), Gaps = 12/342 (4%)
Query 29 LEQAPLVMVAQPQSSQSQAQSYA---GKVQARQQTALSFRVGGQIIERLVEVGDRVHVGQ 85
+ PL V + + Y G + A + RV GQ+I + G +V G
Sbjct 54 MRSGPLAPVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLIALHFQEGQQVKAGD 113
Query 86 VLAKLDVQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRSQYDAIKNQYD 145
+LA++D ++ L A+ QL ++ A +L RYQQL N VSR + DA +
Sbjct 114 LLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVS 173
Query 146 AAQSSLKQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTAYQLAIDGDR- 204
+ ++K ++ A Q +++R+ A +G + + ++VG +++G T + I
Sbjct 174 ETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHP 233
Query 205 -EVVIGLPEQSISSV----KVGQPAWMSLWSQPEQK--FAAYVREIAPAADQSR-TFSVK 256
++V LPE I++V K G+P + W + K + + D + T VK
Sbjct 234 IDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVK 293
Query 257 VALKQAQPSIQMGQSARVFLNATPQQSQLSIPMSSISATKQQPYVWIVKPNNTIQKVNVQ 316
++ Q + +Q+ + IP +++ + +VW++ N + K V
Sbjct 294 ARFNNQDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVT 353
Query 317 LGAYGRDEVTILSGLKSSDWVVVGGVHLLRDQQKIRPIDREN 358
G +V I +G+ + D VV G+ L + K+ ++ ++
Sbjct 354 PGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVEAQS 395
>C4ZSG2 Multidrug resistance protein MdtA [Escherichia coli (strain
K12 / MC4100 / BW2952)]
Length=415
Score = 105 bits (263), Expect = 2e-28
Identities = 79/342 (23%), Positives = 151/342 (44%), Gaps = 12/342 (4%)
Query 29 LEQAPLVMVAQPQSSQSQAQSYA---GKVQARQQTALSFRVGGQIIERLVEVGDRVHVGQ 85
+ PL V + + Y G + A + RV GQ+I + G +V G
Sbjct 54 MRSGPLAPVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLIALHFQEGQQVKAGD 113
Query 86 VLAKLDVQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRSQYDAIKNQYD 145
+LA++D ++ L A+ QL ++ A +L RYQQL N VSR + DA +
Sbjct 114 LLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVS 173
Query 146 AAQSSLKQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTAYQLAIDGDR- 204
+ ++K ++ A Q +++R+ A +G + + ++VG +++G T + I
Sbjct 174 ETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHP 233
Query 205 -EVVIGLPEQSISSV----KVGQPAWMSLWSQPEQK--FAAYVREIAPAADQSR-TFSVK 256
++V LPE I++V K G+P + W + K + + D + T VK
Sbjct 234 IDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVK 293
Query 257 VALKQAQPSIQMGQSARVFLNATPQQSQLSIPMSSISATKQQPYVWIVKPNNTIQKVNVQ 316
++ Q + +Q+ + IP +++ + +VW++ N + K V
Sbjct 294 ARFNNQDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVT 353
Query 317 LGAYGRDEVTILSGLKSSDWVVVGGVHLLRDQQKIRPIDREN 358
G +V I +G+ + D VV G+ L + K+ ++ ++
Sbjct 354 PGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVEAQS 395
>B7UTB2 Multidrug resistance protein MdtA [Escherichia coli O127:H6
(strain E2348/69 / EPEC)]
Length=415
Score = 105 bits (263), Expect = 2e-28
Identities = 79/342 (23%), Positives = 151/342 (44%), Gaps = 12/342 (4%)
Query 29 LEQAPLVMVAQPQSSQSQAQSYA---GKVQARQQTALSFRVGGQIIERLVEVGDRVHVGQ 85
+ PL V + + Y G + A + RV GQ+I + G +V G
Sbjct 54 MRSGPLAPVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLIALHFQEGQQVKAGD 113
Query 86 VLAKLDVQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRSQYDAIKNQYD 145
+LA++D ++ L A+ QL ++ A +L RYQQL N VSR + DA +
Sbjct 114 LLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVS 173
Query 146 AAQSSLKQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTAYQLAIDGDR- 204
+ ++K ++ A Q +++R+ A +G + + ++VG +++G T + I
Sbjct 174 ETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHP 233
Query 205 -EVVIGLPEQSISSV----KVGQPAWMSLWSQPEQK--FAAYVREIAPAADQSR-TFSVK 256
++V LPE I++V K G+P + W + K + + D + T VK
Sbjct 234 IDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVK 293
Query 257 VALKQAQPSIQMGQSARVFLNATPQQSQLSIPMSSISATKQQPYVWIVKPNNTIQKVNVQ 316
++ Q + +Q+ + IP +++ + +VW++ N + K V
Sbjct 294 ARFNNQDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVT 353
Query 317 LGAYGRDEVTILSGLKSSDWVVVGGVHLLRDQQKIRPIDREN 358
G +V I +G+ + D VV G+ L + K+ ++ ++
Sbjct 354 PGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVEAQS 395
>P76397 Multidrug resistance protein MdtA [Escherichia coli (strain
K12)]
Length=415
Score = 105 bits (263), Expect = 2e-28
Identities = 79/342 (23%), Positives = 151/342 (44%), Gaps = 12/342 (4%)
Query 29 LEQAPLVMVAQPQSSQSQAQSYA---GKVQARQQTALSFRVGGQIIERLVEVGDRVHVGQ 85
+ PL V + + Y G + A + RV GQ+I + G +V G
Sbjct 54 MRSGPLAPVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLIALHFQEGQQVKAGD 113
Query 86 VLAKLDVQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRSQYDAIKNQYD 145
+LA++D ++ L A+ QL ++ A +L RYQQL N VSR + DA +
Sbjct 114 LLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVS 173
Query 146 AAQSSLKQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTAYQLAIDGDR- 204
+ ++K ++ A Q +++R+ A +G + + ++VG +++G T + I
Sbjct 174 ETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHP 233
Query 205 -EVVIGLPEQSISSV----KVGQPAWMSLWSQPEQK--FAAYVREIAPAADQSR-TFSVK 256
++V LPE I++V K G+P + W + K + + D + T VK
Sbjct 234 IDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVK 293
Query 257 VALKQAQPSIQMGQSARVFLNATPQQSQLSIPMSSISATKQQPYVWIVKPNNTIQKVNVQ 316
++ Q + +Q+ + IP +++ + +VW++ N + K V
Sbjct 294 ARFNNQDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVT 353
Query 317 LGAYGRDEVTILSGLKSSDWVVVGGVHLLRDQQKIRPIDREN 358
G +V I +G+ + D VV G+ L + K+ ++ ++
Sbjct 354 PGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVEAQS 395
>Q6D2B2 Multidrug resistance protein MdtA [Pectobacterium atrosepticum
(strain SCRI 1043 / ATCC BAA-672)]
Length=411
Score = 105 bits (262), Expect = 3e-28
Identities = 86/343 (25%), Positives = 149/343 (43%), Gaps = 13/343 (4%)
Query 20 SGCHKQTADLEQAPLVMVAQPQSSQSQAQSYAGKVQARQQTALSFRVGGQIIERLVEVGD 79
SG ++ A AP+ +S S G V A L RV GQ++ + G
Sbjct 52 SGGGRRAAMRTLAPVQAALTQSASVPHYLSGLGTVTAANTVTLRSRVNGQLMALHFQEGQ 111
Query 80 RVHVGQVLAKLDVQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRSQYDA 139
+V VG +LA++D + Q++L A+ QL Q+A +L RYQQL+ N +SR + D
Sbjct 112 QVKVGDLLAEIDPRPFQVELTQAQGQLAKDQAALLNTRQDLARYQQLVKTNLISRQELDT 171
Query 140 IKNQYDAAQSSLKQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTAYQLA 199
A+ +LK A Q +Y+++ A +G I + ++VG + +G T +
Sbjct 172 QTAAVRQAEGALKADEGAVASAQLQLDYSKITAPISGRIGLKQVDVGNYITSGDTNGIVV 231
Query 200 IDGDR--EVVIGLPEQSISSV----KVGQPAWMSLWSQPEQKFAAYVREIAPAADQ---- 249
I +VV +PE IS++ K GQP + W + QK + + I + D
Sbjct 232 ITQTYPIDVVFTVPEAEISTILNAQKSGQPPVVEAWDRANQKKLS--QGILLSMDNQIDT 289
Query 250 -SRTFSVKVALKQAQPSIQMGQSARVFLNATPQQSQLSIPMSSISATKQQPYVWIVKPNN 308
+ T +K ++ Q + + ++ + P +++ +VWI+ N
Sbjct 290 TTGTIKLKARFDNLDDALFPNQFVNIRMKVDTLKNAVVAPSAAVQMGNDGRFVWILNNKN 349
Query 309 TIQKVNVQLGAYGRDEVTILSGLKSSDWVVVGGVHLLRDQQKI 351
+ K V V + +GL + VV G+ L + K+
Sbjct 350 EVSKRQVTTSIQYGQLVVVTAGLDADVQVVTDGIDRLTEGAKV 392
>B4EY99 Multidrug resistance protein MdtA [Proteus mirabilis (strain
HI4320)]
Length=411
Score = 104 bits (260), Expect = 6e-28
Identities = 87/344 (25%), Positives = 159/344 (46%), Gaps = 18/344 (5%)
Query 23 HKQTADLEQAPLVMVAQPQSSQSQAQSYA---GKVQARQQTALSFRVGGQIIERLVEVGD 79
++ TA + P+ V S+Q + G V+A ++ RV GQ++ G
Sbjct 50 NRSTAGSRRPPMPPVQVATSAQEDVPQFLTALGTVKAVNSVTVTSRVEGQLMALHFTEGQ 109
Query 80 RVHVGQVLAKLDVQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRSQYD- 138
+V+ G +LA++D + ++QL AK QL Q+ A +L RYQ+L + VS+ + D
Sbjct 110 QVNQGDLLAEIDPRPFEVQLAQAKGQLAKDQATLANARLDLARYQKLAKTHLVSQQELDN 169
Query 139 --AIKNQYDAAQSSLKQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTAY 196
A+ Q +A+ S K A +N A Q Y+++ A +G + + ++VG ++ G +
Sbjct 170 QAALVKQSEASISIDKAAINN---AQLQLTYSKITAPISGRVGLKQVDVGNYISGGSSTP 226
Query 197 QLAID--GDREVVIGLPEQSISSV---KVGQPAWMSLWSQPEQKFAAYVREIAPAADQ-- 249
+ I+ +V+ LPEQ +S V + P + K + +Q
Sbjct 227 IVVINQMDPVDVLFTLPEQDLSQVILARKNNPTLPVIALDRNNKIELAQGALFSVDNQID 286
Query 250 --SRTFSVKVALKQAQPSIQMGQSARVFLNATPQQSQLSIPMSSISATKQQPYVWIVKPN 307
+ T +K Q + ++ Q + L T + + IP +++ + +VW+V
Sbjct 287 ATTGTIKLKARFPQQESTLFPNQFVNIRLYVTTLEKAVVIPNAALQMGNEGHFVWVVDEE 346
Query 308 NTIQKVNVQLGAYGRDEVTILSGLKSSDWVVVGGVHLLRDQQKI 351
N + K+ V++ + D+V I SGL ++ VV GV L K+
Sbjct 347 NKVSKLAVEVASQNADKVVIASGLSANQRVVTDGVDRLTQGAKV 390
>B7M457 Multidrug resistance protein MdtA [Escherichia coli O8
(strain IAI1)]
Length=415
Score = 104 bits (260), Expect = 6e-28
Identities = 78/342 (23%), Positives = 151/342 (44%), Gaps = 12/342 (4%)
Query 29 LEQAPLVMVAQPQSSQSQAQSYA---GKVQARQQTALSFRVGGQIIERLVEVGDRVHVGQ 85
+ PL V + + Y G + A + RV GQ++ + G +V G
Sbjct 54 MRSGPLAPVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLMALHFQEGQQVKAGD 113
Query 86 VLAKLDVQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRSQYDAIKNQYD 145
+LA++D ++ L A+ QL ++ A +L RYQQL N VSR + DA +
Sbjct 114 LLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVS 173
Query 146 AAQSSLKQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTAYQLAIDGDR- 204
+ ++K ++ A Q +++R+ A +G + + ++VG +++G T + I
Sbjct 174 ETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHP 233
Query 205 -EVVIGLPEQSISSV----KVGQPAWMSLWSQPEQK--FAAYVREIAPAADQSR-TFSVK 256
++V LPE I++V K G+P + W + K + + D + T VK
Sbjct 234 IDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVK 293
Query 257 VALKQAQPSIQMGQSARVFLNATPQQSQLSIPMSSISATKQQPYVWIVKPNNTIQKVNVQ 316
++ Q + +Q+ + IP +++ + +VW++ N + K V
Sbjct 294 ARFNNQDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVT 353
Query 317 LGAYGRDEVTILSGLKSSDWVVVGGVHLLRDQQKIRPIDREN 358
G +V I +G+ + D VV G+ L + K+ ++ ++
Sbjct 354 PGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVEAQS 395
>B7MWY7 Multidrug resistance protein MdtA [Escherichia coli O81
(strain ED1a)]
Length=415
Score = 104 bits (260), Expect = 6e-28
Identities = 78/342 (23%), Positives = 151/342 (44%), Gaps = 12/342 (4%)
Query 29 LEQAPLVMVAQPQSSQSQAQSYA---GKVQARQQTALSFRVGGQIIERLVEVGDRVHVGQ 85
+ PL V + + Y G + A + RV GQ++ + G +V G
Sbjct 54 MRSGPLAPVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLMALHFQEGQQVKAGD 113
Query 86 VLAKLDVQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRSQYDAIKNQYD 145
+LA++D ++ L A+ QL ++ A +L RYQQL N VSR + DA +
Sbjct 114 LLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVS 173
Query 146 AAQSSLKQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTAYQLAIDGDR- 204
+ ++K ++ A Q +++R+ A +G + + ++VG +++G T + I
Sbjct 174 ETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHP 233
Query 205 -EVVIGLPEQSISSV----KVGQPAWMSLWSQPEQK--FAAYVREIAPAADQSR-TFSVK 256
++V LPE I++V K G+P + W + K + + D + T VK
Sbjct 234 IDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVK 293
Query 257 VALKQAQPSIQMGQSARVFLNATPQQSQLSIPMSSISATKQQPYVWIVKPNNTIQKVNVQ 316
++ Q + +Q+ + IP +++ + +VW++ N + K V
Sbjct 294 ARFNNQDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVT 353
Query 317 LGAYGRDEVTILSGLKSSDWVVVGGVHLLRDQQKIRPIDREN 358
G +V I +G+ + D VV G+ L + K+ ++ ++
Sbjct 354 PGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVEAQS 395
>A7ZNP7 Multidrug resistance protein MdtA [Escherichia coli O139:H28
(strain E24377A / ETEC)]
Length=415
Score = 104 bits (260), Expect = 6e-28
Identities = 78/342 (23%), Positives = 151/342 (44%), Gaps = 12/342 (4%)
Query 29 LEQAPLVMVAQPQSSQSQAQSYA---GKVQARQQTALSFRVGGQIIERLVEVGDRVHVGQ 85
+ PL V + + Y G + A + RV GQ++ + G +V G
Sbjct 54 MRSGPLAPVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLMALHFQEGQQVKAGD 113
Query 86 VLAKLDVQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRSQYDAIKNQYD 145
+LA++D ++ L A+ QL ++ A +L RYQQL N VSR + DA +
Sbjct 114 LLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVS 173
Query 146 AAQSSLKQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTAYQLAIDGDR- 204
+ ++K ++ A Q +++R+ A +G + + ++VG +++G T + I
Sbjct 174 ETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHP 233
Query 205 -EVVIGLPEQSISSV----KVGQPAWMSLWSQPEQK--FAAYVREIAPAADQSR-TFSVK 256
++V LPE I++V K G+P + W + K + + D + T VK
Sbjct 234 IDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVK 293
Query 257 VALKQAQPSIQMGQSARVFLNATPQQSQLSIPMSSISATKQQPYVWIVKPNNTIQKVNVQ 316
++ Q + +Q+ + IP +++ + +VW++ N + K V
Sbjct 294 ARFNNQDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVT 353
Query 317 LGAYGRDEVTILSGLKSSDWVVVGGVHLLRDQQKIRPIDREN 358
G +V I +G+ + D VV G+ L + K+ ++ ++
Sbjct 354 PGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVEAQS 395
>B7ME86 Multidrug resistance protein MdtA [Escherichia coli O45:K1
(strain S88 / ExPEC)]
Length=415
Score = 104 bits (260), Expect = 6e-28
Identities = 74/316 (23%), Positives = 144/316 (46%), Gaps = 9/316 (3%)
Query 52 GKVQARQQTALSFRVGGQIIERLVEVGDRVHVGQVLAKLDVQDAQLQLNAAKAQLDNAQS 111
G + A + RV GQ++ + G +V G +LA++D ++ L A+ QL ++
Sbjct 80 GTITAANTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPSQFKVALAQAQGQLAKDKA 139
Query 112 AAKIAADELQRYQQLLPINAVSRSQYDAIKNQYDAAQSSLKQARSNYDVASNQTNYNRLL 171
A +L RYQQL N VSR + DA + + ++K ++ A Q +++R+
Sbjct 140 TLANARRDLSRYQQLAKTNLVSRQELDAQQALVSETEGTIKADEASVASAQLQLDWSRIT 199
Query 172 ANKNGVITERLIEVGQVVAAGQTAYQLAIDGDR--EVVIGLPEQSISSV----KVGQPAW 225
A +G + + ++VG +++G T + I ++V LPE I++V K G+P
Sbjct 200 APVDGRVGLKQVDVGNQISSGDTTGIVVITQTHPIDLVFTLPESDIATVVQAQKAGKPLV 259
Query 226 MSLWSQPEQK--FAAYVREIAPAADQSR-TFSVKVALKQAQPSIQMGQSARVFLNATPQQ 282
+ W + K + + D + T VK ++ Q + +Q
Sbjct 260 VEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVKARFNNQDDALFPNQFVNARMLVDTEQ 319
Query 283 SQLSIPMSSISATKQQPYVWIVKPNNTIQKVNVQLGAYGRDEVTILSGLKSSDWVVVGGV 342
+ + IP +++ + +VW++ N + K V G +V I +G+ + D VV G+
Sbjct 320 NAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVTPGIQDSQKVVIRAGISAGDRVVTDGI 379
Query 343 HLLRDQQKIRPIDREN 358
L + K+ ++ ++
Sbjct 380 DRLTEGAKVEVVEAQS 395
>P75830 Macrolide export protein MacA [Escherichia coli (strain
K12)]
Length=371
Score = 98.6 bits (244), Expect = 5e-26
Identities = 76/326 (23%), Positives = 151/326 (46%), Gaps = 22/326 (7%)
Query 36 MVAQPQSSQSQAQSYAGKVQARQQTALSFRVGGQIIERLVEVGDRVHVGQVLAKLDVQDA 95
++ +P Q Q+ GK+ A ++ + +V GQ+ V +GD+V Q+L +D + A
Sbjct 39 LIVRPGDLQ-QSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQA 97
Query 96 QLQLNAA-------KAQLDNAQSAAKIAADELQRYQQLLPINAVSRSQYD------AIKN 142
+ Q+ +AQ A++ K+A R Q+L AVS+ D A+K
Sbjct 98 ENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTKAVSQQDLDTAATEMAVKQ 157
Query 143 -QYDAAQSSLKQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTAYQLAID 201
Q + +K+ +++ D A +Y R++A G +T+ GQ V A Q A +
Sbjct 158 AQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTL 217
Query 202 GDREVVI---GLPEQSISSVKVGQPAWMSLWSQPEQKFAAYVREIAPAADQSRT---FSV 255
D ++ + E + +K GQ AW ++ P ++ ++++ P ++ +
Sbjct 218 ADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYYA 277
Query 256 KVALKQAQPSIQMGQSARVFLNATPQQSQLSIPMSSI-SATKQQPYVWIVKPNNTIQKVN 314
+ + +++ +A+V + T ++ L+IP+S++ Y + N ++
Sbjct 278 RFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETRERE 337
Query 315 VQLGAYGRDEVTILSGLKSSDWVVVG 340
V +GA +V I+ GL++ D VV+G
Sbjct 338 VTIGARNDTDVEIVKGLEAGDEVVIG 363
>O31099 Solvent efflux pump periplasmic linker SrpA [Pseudomonas
putida]
Length=382
Score = 82.0 bits (201), Expect = 3e-20
Identities = 85/336 (25%), Positives = 143/336 (43%), Gaps = 41/336 (12%)
Query 52 GKVQARQQTALSFRVGGQIIERLVEVGDRVHVGQVLAKLDVQDAQLQLNAAKAQLDNAQS 111
G+ A + + +V G + +R G V +GQ L ++D + + QL A+A +AQ+
Sbjct 57 GRTSAFRVAEVRPQVSGILQKRSFVEGAEVKLGQQLYQIDPRTYEAQLRRAEANRTSAQN 116
Query 112 AAKIAADELQRYQQLLPINAVSRSQYDAIKNQYDAAQSSLKQARSNYDVASNQTNYNRLL 171
A+ RY+ LL AVS K QYD A ++ KQA ++Y VA Y R+L
Sbjct 117 LAR-------RYETLLKTKAVS-------KQQYDDALAAWKQAEADYQVARIDVQYTRVL 162
Query 172 ANKNGVITERLIEVGQVVAAGQTAYQLAIDGDREVVIGLPEQSISSVKVGQPAWMSLWSQ 231
+ +G I + G +V GQ A LA + + Q I+ + Q A L S
Sbjct 163 SPISGRIGRSTVTEGALVTNGQ-AQSLATVTQLDPIYVDVTQPITKLLGLQKA---LESG 218
Query 232 PEQKFAAYVREIAPAADQSRTFSVKVALKQAQPSIQ--------------------MGQS 271
QK E++ D + + LK ++ S+ G
Sbjct 219 RLQKTGENQAEVSLTLDDGSAYPLPGTLKFSEVSVDPTTGSVTLRAEFPNPNRKLLPGMF 278
Query 272 ARVFLNATPQQSQLSIPMSSISA-TKQQPYVWIVKPNNTIQKVNVQLGAYGRDEVTILSG 330
L Q + + +P +IS T+ P VW+VK +NT++ +Q + I +G
Sbjct 279 VHALLKEGVQNAAILVPQQAISRDTRGVPSVWVVKADNTVESREIQTLRTVGNAWLISNG 338
Query 331 LKSSDWVVVGGVHLLRDQQKIRPIDRENRAVNIQTG 366
+ + ++ GV +R + ++ +N VN+ G
Sbjct 339 VTEGERIITEGVQRVRSGIAVNAVEAKN--VNLVDG 372
>Q93PU5 Toluene efflux pump periplasmic linker protein TtgG [Pseudomonas
putida (strain DOT-T1E)]
Length=391
Score = 82.0 bits (201), Expect = 3e-20
Identities = 85/336 (25%), Positives = 143/336 (43%), Gaps = 41/336 (12%)
Query 52 GKVQARQQTALSFRVGGQIIERLVEVGDRVHVGQVLAKLDVQDAQLQLNAAKAQLDNAQS 111
G+ A + + +V G + +R G V +GQ L ++D + + QL A+A +AQ+
Sbjct 66 GRTSAFRVAEVRPQVSGILQKRSFVEGAEVKLGQQLYQIDPRTYEAQLRRAEANRTSAQN 125
Query 112 AAKIAADELQRYQQLLPINAVSRSQYDAIKNQYDAAQSSLKQARSNYDVASNQTNYNRLL 171
A+ RY+ LL AVS K QYD A ++ KQA ++Y VA Y R+L
Sbjct 126 LAR-------RYETLLKTKAVS-------KQQYDDALAAWKQAEADYQVARIDVQYTRVL 171
Query 172 ANKNGVITERLIEVGQVVAAGQTAYQLAIDGDREVVIGLPEQSISSVKVGQPAWMSLWSQ 231
+ +G I + G +V GQ A LA + + Q I+ + Q A L S
Sbjct 172 SPISGRIGRSTVTEGALVTNGQ-AQSLATVTQLDPIYVDVTQPITKLLGLQKA---LESG 227
Query 232 PEQKFAAYVREIAPAADQSRTFSVKVALKQAQPSIQ--------------------MGQS 271
QK E++ D + + LK ++ S+ G
Sbjct 228 RLQKTGENQAEVSLTLDDGSAYPLPGTLKFSEVSVDPTTGSVTLRAEFPNPNRKLLPGMF 287
Query 272 ARVFLNATPQQSQLSIPMSSISA-TKQQPYVWIVKPNNTIQKVNVQLGAYGRDEVTILSG 330
L Q + + +P +IS T+ P VW+VK +NT++ +Q + I +G
Sbjct 288 VHALLKEGVQNAAILVPQQAISRDTRGVPSVWVVKADNTVESREIQTLRTVGNAWLISNG 347
Query 331 LKSSDWVVVGGVHLLRDQQKIRPIDRENRAVNIQTG 366
+ + ++ GV +R + ++ +N VN+ G
Sbjct 348 VTEGERIITEGVQRVRSGIAVNAVEAKN--VNLVDG 381
>Q9KWV5 Toluene efflux pump periplasmic linker protein TtgD [Pseudomonas
putida (strain DOT-T1E)]
Length=382
Score = 79.0 bits (193), Expect = 3e-19
Identities = 86/364 (24%), Positives = 155/364 (43%), Gaps = 42/364 (12%)
Query 19 LSGCHKQ-TADLEQAPLVMVAQPQSSQSQAQS--YAGKVQARQQTALSFRVGGQIIERLV 75
L GC KQ T + P + +Q+ + G+ A + + + + G + +R+
Sbjct 21 LVGCGKQETVESTAVPPEVGVYTVKAQALTLTTDLPGRTSAYRVSEVRPQASGILQKRMF 80
Query 76 EVGDRVHVGQVLAKLDVQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRS 135
G V G+ L ++D + + L A+A L AQ+ A+ RY++LL NA+S
Sbjct 81 VEGAEVKQGEQLYQIDPRTYEALLARAEASLLTAQNLAR-------RYERLLDTNAIS-- 131
Query 136 QYDAIKNQYDAAQSSLKQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTA 195
+ QYD A ++ KQA++ +A Y ++LA G I + G +V GQ A
Sbjct 132 -----QQQYDDAMATWKQAQAEAQMARINMQYTKVLAPITGRIGRSAVTEGALVTNGQ-A 185
Query 196 YQLAIDGDREVVIGLPEQSISSVKVGQPAWMSLWSQPEQKFAAYVREIAPAADQSRTFSV 255
+LA + + Q I+ + + A L S Q+ +++ D + +
Sbjct 186 QELATVTQLDPIYVDVNQPITRLLGLKRA---LESGRLQRVGDNQAQVSLTLDDGTPYPL 242
Query 256 KVALKQAQPSIQ--------------------MGQSARVFLNATPQQSQLSIPMSSISA- 294
K LK ++ S+ G LN QQ+ + +P ++
Sbjct 243 KGVLKFSEVSVAPSTGSVTLRAEFPNPDHKLLPGMFVHALLNEGEQQAAILVPHQAVGRD 302
Query 295 TKQQPYVWIVKPNNTIQKVNVQLGAYGRDEVTILSGLKSSDWVVVGGVHLLRDQQKIRPI 354
+ P VW+VKP+NT++ VQ + + +G+ + V+ GV L R ++P+
Sbjct 303 ARGVPTVWVVKPDNTVESREVQTLQTVGNAWLLGAGINDGERVITEGVQLARSGITVKPV 362
Query 355 DREN 358
+N
Sbjct 363 AAKN 366
>Q849Q9 Probable efflux pump periplasmic linker protein SepA [Pseudomonas
putida (strain ATCC 700007 / DSM 6899 / BCRC 17059
/ F1)]
Length=382
Score = 79.0 bits (193), Expect = 3e-19
Identities = 86/364 (24%), Positives = 155/364 (43%), Gaps = 42/364 (12%)
Query 19 LSGCHKQ-TADLEQAPLVMVAQPQSSQSQAQS--YAGKVQARQQTALSFRVGGQIIERLV 75
L GC KQ T + P + +Q+ + G+ A + + + + G + +R+
Sbjct 21 LVGCGKQETVESTAVPPEVGVYTVKAQALTLTTDLPGRTSAYRVSEVRPQASGILQKRMF 80
Query 76 EVGDRVHVGQVLAKLDVQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRS 135
G V G+ L ++D + + L A+A L AQ+ A+ RY++LL NA+S
Sbjct 81 VEGAEVKQGEQLYQIDPRTYEALLARAEASLLTAQNLAR-------RYERLLDTNAIS-- 131
Query 136 QYDAIKNQYDAAQSSLKQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTA 195
+ QYD A ++ KQA++ +A Y ++LA G I + G +V GQ A
Sbjct 132 -----QQQYDDAMATWKQAQAEAQMARINMQYTKVLAPITGRIGRSAVTEGALVTNGQ-A 185
Query 196 YQLAIDGDREVVIGLPEQSISSVKVGQPAWMSLWSQPEQKFAAYVREIAPAADQSRTFSV 255
+LA + + Q I+ + + A L S Q+ +++ D + +
Sbjct 186 QELATVTQLDPIYVDVNQPITRLLGLKRA---LESGRLQRVGDNQAQVSLTLDDGTPYPL 242
Query 256 KVALKQAQPSIQ--------------------MGQSARVFLNATPQQSQLSIPMSSISA- 294
K LK ++ S+ G LN QQ+ + +P ++
Sbjct 243 KGVLKFSEVSVAPSTGSVTLRAEFPNPDHKLLPGMFVHALLNEGEQQAAILVPHQAVGRD 302
Query 295 TKQQPYVWIVKPNNTIQKVNVQLGAYGRDEVTILSGLKSSDWVVVGGVHLLRDQQKIRPI 354
+ P VW+VKP+NT++ VQ + + +G+ + V+ GV L R ++P+
Sbjct 303 ARGVPTVWVVKPDNTVESREVQTLQTVGNAWLLGAGINDGERVITEGVQLARSGITVKPV 362
Query 355 DREN 358
+N
Sbjct 363 AAKN 366
>Q8FWV8 Efflux pump periplasmic linker BepF [Brucella suis biovar
1 (strain 1330)]
Length=411
Score = 72.8 bits (177), Expect = 4e-17
Identities = 85/367 (23%), Positives = 144/367 (39%), Gaps = 25/367 (7%)
Query 8 LSGWVMLCMLGLSGCH------KQTADLEQAPLVMVAQPQSSQSQAQSYAGKVQARQQTA 61
L W ++ LGL+ C +Q A L P+ ++ + S+ G+V+A
Sbjct 32 LRPWFLVLALGLAACSEDKSAPQQAAPLPPIPVGVIKITERPTHPQLSFVGRVEATDSVD 91
Query 62 LSFRVGGQIIERLVEVGDRVHVGQVLAKLDVQDAQLQLNAAKAQLDNAQSAAKIAADELQ 121
L RV G + +R G V G +L L Q L+AA+A L AQ+ A + +
Sbjct 92 LIARVDGFLDKRTFTEGQAVKTGDLLFVLQKDALQAALDAAQANLAKAQADADNLKLQTE 151
Query 122 RYQQLLPINAVSRSQYDAIKNQYDAAQSSLKQARSNYDVASNQTNYNRLLANKNGVITER 181
R + L VS++ D A + ++QA+++ + A Y + A +G I
Sbjct 152 RARSLYKQKTVSQAMLDDRVAAEKQALAVVQQAQASLEQAQINLGYTDIRAPFSGRIGMA 211
Query 182 LIEVGQVVAAGQTAYQLAIDGD---------REVVIGLPEQSISSVKVGQPAWMSL---- 228
VG +V + D + ++ L E ++ A +SL
Sbjct 212 NFSVGALVGPSSGPLATIVSQDPIYVTFPVSDKTILDLTEGGRTATDRSNVA-VSLTLSN 270
Query 229 -WSQPEQKFAAYVR-EIAPAADQSRTFSVKVALKQAQPSIQMGQSARVFLNATPQQSQLS 286
+ P+ + +I P D T V+ + GQ +V + L
Sbjct 271 GMTYPQTGAIDFTGIKINPNTD---TLMVRAQFPNPNNVLIDGQYVQVTAASKHPVEALL 327
Query 287 IPMSSISATKQQPYVWIVKPNNTIQKVNVQLGAYGRDEVTILSGLKSSDWVVVGGVHLLR 346
+P +I + YV V +N + + + G+ V + SGL D VVV G+ +R
Sbjct 328 VPQKAIMTDQSGNYVLAVGEDNKVIQRQITQGSTFGSNVVVKSGLAVGDQVVVDGLQRIR 387
Query 347 DQQKIRP 353
QK+ P
Sbjct 388 PGQKVDP 394
>P0AE06 Multidrug efflux pump subunit AcrA [Escherichia coli (strain
K12)]
Length=397
Score = 71.6 bits (174), Expect = 1e-16
Identities = 82/369 (22%), Positives = 154/369 (42%), Gaps = 30/369 (8%)
Query 4 IFLILSGWVMLCMLGLSGCHKQTADL--EQAPLVMVAQPQSSQSQAQS-YAGKVQARQQT 60
+ L+LSG L L+GC + A +Q P V V ++ Q + G+ A +
Sbjct 12 VVLMLSG-----SLALTGCDDKQAQQGGQQMPAVGVVTVKTEPLQITTELPGRTSAYRIA 66
Query 61 ALSFRVGGQIIERLVEVGDRVHVGQVLAKLDVQDAQLQLNAAKAQLDNAQSAAKIAADEL 120
+ +V G I++R + G + G L ++D Q ++AK L AQ+AA IA +
Sbjct 67 EVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTV 126
Query 121 QRYQQLLPINAVSRSQYDAIKNQYDAAQSSLKQARSNYDVASNQTNYNRLLANKNGVITE 180
RYQ+LL +S+ +YD A +++ A++ + A Y ++ + +G I +
Sbjct 127 NRYQKLLGTQYISKQEYDQALADAQQANAAVTAAKAAVETARINLAYTKVTSPISGRIGK 186
Query 181 RLIEVGQVVAAGQTAYQLAIDGDREVVIGLPEQSISSVKVGQ------------PAWMSL 228
+ G +V GQ + + + + + S +++ Q A +SL
Sbjct 187 SNVTEGALVQNGQATALATVQQLDPIYVDVTQSSNDFLRLKQELANGTLKQENGKAKVSL 246
Query 229 WSQPEQKFAA-YVREIAPAADQSRTFSVKVALKQAQP--SIQMGQSARVFLNATPQQSQL 285
+ KF E + T S+ + P ++ G R L + +
Sbjct 247 ITSDGIKFPQDGTLEFSDVTVDQTTGSITLRAIFPNPDHTLLPGMFVRARLEEGLNPNAI 306
Query 286 SIPMSSISAT-KQQPYVWIVKPNNTIQKVNVQLGAYGRDEVTILSGLKSSDWVVVGGVHL 344
+P ++ T + V +V ++ ++ + D+ + GLK+ D VV+ G+
Sbjct 307 LVPQQGVTRTPRGDATVLVVGADDKVETRPIVASQAIGDKWLVTEGLKAGDRVVISGL-- 364
Query 345 LRDQQKIRP 353
QK+RP
Sbjct 365 ----QKVRP 369
>Q9L9D4 UPF0194 membrane protein in asrC 5'region [Acidithiobacillus
ferridurans]
Length=338
Score = 70.9 bits (172), Expect = 1e-16
Identities = 56/194 (29%), Positives = 93/194 (48%), Gaps = 17/194 (9%)
Query 103 KAQLDNAQSAAKIAADELQRYQQLLPINAVSRSQYDAIKNQYDAAQSSLKQARSNYDVAS 162
K LDNA +A K A L R QQ L + A+ + K AA+ L+ ++ +A
Sbjct 148 KQSLDNAAAALKTARANLDRAQQALTL-AIKGPR----KEDIAAARQQLQADKAGLSLAR 202
Query 163 NQTNYNRLLANKNGVITERLIEVGQVVAAGQTAYQLAIDGDREVVIGLPEQSISSVKVGQ 222
+ RL A ++GV+ +R++E G +V+ + LA+D V LPE+++ V++G
Sbjct 203 RELTDTRLYAPEDGVVQDRILEPGDMVSPQTPVFTLALDNPVWVRAYLPEKALGQVRLGM 262
Query 223 PAWMSLWSQPEQKFAAYVREIAPAAD---------QSRT---FSVKVALKQAQPSIQMGQ 270
A +S S P + F +V I+P A+ + RT + V+V Q +++G
Sbjct 263 KATISSDSFPGKSFPGWVGFISPTAEFTPKTVQTTELRTELVYRVRVYACNPQHRLRLGM 322
Query 271 SARVFLNATPQQSQ 284
V + T Q Q
Sbjct 323 PVTVHIPLTDNQPQ 336
>Q9WWZ9 Toluene efflux pump periplasmic linker protein TtgA [Pseudomonas
putida (strain DOT-T1E)]
Length=384
Score = 66.2 bits (160), Expect = 6e-15
Identities = 86/360 (24%), Positives = 146/360 (41%), Gaps = 35/360 (10%)
Query 19 LSGCHKQ-TADLEQAPLVMVA--QPQSSQSQAQSYAGKVQARQQTALSFRVGGQIIERLV 75
LSGC K+ A QAP V V QPQ+ ++ G+ A + + +V G I++RL
Sbjct 20 LSGCKKEEAAPAAQAPQVGVVTIQPQAFTLTSE-LPGRTSAYRVAEVRPQVNGIILKRLF 78
Query 76 EVGDRVHVGQVLAKLDVQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRS 135
+ G V GQ L ++D + L AKA L +S A +RY+QL+ AVS+
Sbjct 79 KEGSEVKEGQQLYQIDPAVYEATLANAKANLLATRSLA-------ERYKQLIDEQAVSKQ 131
Query 136 QYDAIKNQYDAAQSSLKQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTA 195
+YD + A++SLK A+ + Y ++LA +G I G +V+ GQT
Sbjct 132 EYDDANAKRLQAEASLKSAQID-------LRYTKVLAPISGRIGRSSFTEGALVSNGQTD 184
Query 196 YQLAIDGDREVVIGLPEQSISSVKV-------------GQPAWMSLWSQPEQKFAAYVR- 241
I + + + + + +K+ A + L + F R
Sbjct 185 AMATIQQLDPIYVDVTQSTAELLKLRRDLESGQLQKAGNNAASVQLVLEDGSLFKQEGRL 244
Query 242 EIAPAADQSRTFSVKVALKQAQP--SIQMGQSARVFLNATPQQSQLSIPMSSISA-TKQQ 298
E + A T SV + P ++ G L A + + P ++ K
Sbjct 245 EFSEVAVDETTGSVTLRALFPNPDHTLLPGMFVHARLKAGVNANAILAPQQGVTRDLKGA 304
Query 299 PYVWIVKPNNTIQKVNVQLGAYGRDEVTILSGLKSSDWVVVGGVHLLRDQQKIRPIDREN 358
P +V N ++ ++ + I GL D ++ G+ +R +++ D N
Sbjct 305 PTALVVNQENKVELRQLKASRTLGSDWLIEEGLNPGDRLITEGLQYVRPGVEVKVSDATN 364
>Q88N30 Probable efflux pump periplasmic linker TtgA [Pseudomonas
putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB
11950 / KT2440)]
Length=384
Score = 66.2 bits (160), Expect = 6e-15
Identities = 88/360 (24%), Positives = 148/360 (41%), Gaps = 35/360 (10%)
Query 19 LSGCHKQ-TADLEQAPLVMVA--QPQSSQSQAQSYAGKVQARQQTALSFRVGGQIIERLV 75
LSGC K+ A QAP V V QPQ+ ++ G+ A + + +V G I++RL
Sbjct 20 LSGCKKEEAAPAAQAPQVGVVTIQPQAFTLTSE-LPGRTSAYRVAEVRPQVNGIILKRLF 78
Query 76 EVGDRVHVGQVLAKLDVQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRS 135
+ G V GQ L ++D + L AKA L +S A +RY+QL+ AVS+
Sbjct 79 KEGSEVKEGQQLYQIDPAVYEATLANAKANLLATRSLA-------ERYKQLIDEQAVSKQ 131
Query 136 QYDAIKNQYDAAQSSLKQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTA 195
+YD + A++SLK A+ + Y ++LA +G I G +V+ GQT
Sbjct 132 EYDDANAKRLQAEASLKSAQID-------LRYTKVLAPISGRIGRSSFTEGALVSNGQTD 184
Query 196 YQLAIDGDREVVIGLPEQSISSVKV------GQ-------PAWMSLWSQPEQKFAAYVR- 241
I + + + + + +K+ GQ A + L + F R
Sbjct 185 AMATIQQLDPIYVDVTQSTAELLKLRRDLESGQLQKAGDNAASVQLVLEDGSLFKQEGRL 244
Query 242 EIAPAADQSRTFSVKVALKQAQP--SIQMGQSARVFLNATPQQSQLSIPMSSISA-TKQQ 298
E + A T SV + P ++ G L A + + P ++ K
Sbjct 245 EFSEVAVDETTGSVTLRALFPNPDHTLLPGMFVHARLKAGVNANAILAPQQGVTRDLKGA 304
Query 299 PYVWIVKPNNTIQKVNVQLGAYGRDEVTILSGLKSSDWVVVGGVHLLRDQQKIRPIDREN 358
P +V N ++ ++ + I GL D ++ G+ +R +++ D N
Sbjct 305 PTALVVNQENKVELRQLKASRTLGSDWLIEEGLNPGDRLITEGLQYVRPGVEVKVSDATN 364
>P0C069 Multidrug/solvent efflux pump periplasmic linker protein
MepA [Pseudomonas putida]
Length=384
Score = 66.2 bits (160), Expect = 6e-15
Identities = 88/360 (24%), Positives = 148/360 (41%), Gaps = 35/360 (10%)
Query 19 LSGCHKQ-TADLEQAPLVMVA--QPQSSQSQAQSYAGKVQARQQTALSFRVGGQIIERLV 75
LSGC K+ A QAP V V QPQ+ ++ G+ A + + +V G I++RL
Sbjct 20 LSGCKKEEAAPAAQAPQVGVVTIQPQAFTLTSE-LPGRTSAYRVAEVRPQVNGIILKRLF 78
Query 76 EVGDRVHVGQVLAKLDVQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRS 135
+ G V GQ L ++D + L AKA L +S A +RY+QL+ AVS+
Sbjct 79 KEGSEVKEGQQLYQIDPAVYEATLANAKANLLATRSLA-------ERYKQLIDEQAVSKQ 131
Query 136 QYDAIKNQYDAAQSSLKQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTA 195
+YD + A++SLK A+ + Y ++LA +G I G +V+ GQT
Sbjct 132 EYDDANAKRLQAEASLKSAQID-------LRYTKVLAPISGRIGRSSFTEGALVSNGQTD 184
Query 196 YQLAIDGDREVVIGLPEQSISSVKV------GQ-------PAWMSLWSQPEQKFAAYVR- 241
I + + + + + +K+ GQ A + L + F R
Sbjct 185 AMATIQQLDPIYVDVTQSTAELLKLRRDLESGQLQKAGDNAASVQLVLEDGSLFKQEGRL 244
Query 242 EIAPAADQSRTFSVKVALKQAQP--SIQMGQSARVFLNATPQQSQLSIPMSSISA-TKQQ 298
E + A T SV + P ++ G L A + + P ++ K
Sbjct 245 EFSEVAVDETTGSVTLRALFPNPDHTLLPGMFVHARLKAGVNANAILAPQQGVTRDLKGA 304
Query 299 PYVWIVKPNNTIQKVNVQLGAYGRDEVTILSGLKSSDWVVVGGVHLLRDQQKIRPIDREN 358
P +V N ++ ++ + I GL D ++ G+ +R +++ D N
Sbjct 305 PTALVVNQENKVELRQLKASRTLGSDWLIEEGLNPGDRLITEGLQYVRPGVEVKVSDATN 364
>Q9KJC3 Antibiotic efflux pump periplasmic linker protein ArpA
[Pseudomonas putida]
Length=371
Score = 64.3 bits (155), Expect = 2e-14
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 18/205 (9%)
Query 19 LSGCHKQ-TADLEQAPLVMVA--QPQSSQSQAQSYAGKVQARQQTALSFRVGGQIIERLV 75
LSGC K+ A QAP V V QPQ+ ++ G+ A + + +V G I++RL
Sbjct 20 LSGCKKEEAAPAAQAPQVGVVTIQPQAFTLTSE-LPGRTSAYRVAEVRPQVNGIILKRLF 78
Query 76 EVGDRVHVGQVLAKLDVQDAQLQLNAAKAQLDNAQSAAKIAADELQRYQQLLPINAVSRS 135
+ G V GQ L ++D + L AKA L +S A +RY+QL+ AVS+
Sbjct 79 KEGSEVKEGQQLYQIDPAVYEATLANAKANLLATRSLA-------ERYKQLIDEQAVSKQ 131
Query 136 QYDAIKNQYDAAQSSLKQARSNYDVASNQTNYNRLLANKNGVITERLIEVGQVVAAGQTA 195
+YD + A++SLK A+ + Y ++LA +G I G +V+ GQT
Sbjct 132 EYDDANAKRLQAEASLKSAQID-------LRYTKVLAPISGRIGRSSFTEGALVSNGQTD 184
Query 196 YQLAIDGDREVVIGLPEQSISSVKV 220
I + + + + + +K+
Sbjct 185 AMATIQQLDPIYVDVTQSTAELLKL 209
Score = 20.8 bits (42), Expect = 1.8
Identities = 16/56 (29%), Positives = 24/56 (43%), Gaps = 10/56 (18%)
Query 26 TADLEQAPLVMVAQPQSSQSQAQSYAGKVQARQQTALSFRVGGQIIERLVEVGDRV 81
T DL+ AP +V ++ KV+ RQ A +IE + GDR+
Sbjct 298 TRDLKGAPTALVVNQEN----------KVELRQLKASRTLGSDWLIEEGLNPGDRL 343
Lambda K H a alpha
0.317 0.129 0.358 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3287664
Database: 345679e8a6c93e850f8a43c158a7d140.SwissProt.fasta
Posted date: May 9, 2024 10:10 AM
Number of letters in database: 12,024
Number of sequences in database: 30
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
