BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: aa01cbbe18453dd1780188bcd98eddcf.SwissProt.fasta
10 sequences; 1,492 total letters
Query= ACIAD3601
Length=161
Score E
Sequences producing significant alignments: (Bits) Value
Q88E79 UPF0260 protein PP_4587 [Pseudomonas putida (strain ATCC 4... 185 7e-65
A5W002 UPF0260 protein Pput_1301 [Pseudomonas putida (strain ATCC... 184 1e-64
Q1I6K6 UPF0260 protein PSEEN4031 [Pseudomonas entomophila (strain... 183 3e-64
Q4ZW57 UPF0260 protein Psyr_1567 [Pseudomonas syringae pv. syring... 182 5e-64
Q87Y85 UPF0260 protein PSPTO_3918 [Pseudomonas syringae pv. tomat... 182 1e-63
B0KSS1 UPF0260 protein PputGB1_4117 [Pseudomonas putida (strain G... 180 5e-63
Q48LC2 UPF0260 protein PSPPH_1551 [Pseudomonas savastanoi pv. pha... 179 9e-63
Q4KGK7 UPF0260 protein PFL_1499 [Pseudomonas fluorescens (strain ... 176 2e-61
C1DPM9 UPF0260 protein Avin_32930 [Azotobacter vinelandii (strain... 176 3e-61
Q3KGH1 UPF0260 protein Pfl01_1392 [Pseudomonas fluorescens (strai... 175 4e-61
>Q88E79 UPF0260 protein PP_4587 [Pseudomonas putida (strain ATCC
47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)]
Length=150
Score = 185 bits (469), Expect = 7e-65
Identities = 80/138 (58%), Positives = 103/138 (75%), Gaps = 0/138 (0%)
Query 19 FWKHYALDALNQAEWEALCDGCGLCCLIKLEDEETNEIAYTKVACKLLDCKTARCSDYAD 78
FW+ L+ L+Q EWE+LCDGCGLCCL KLEDE+ N + YT++ACKLLD T +CSDY +
Sbjct 9 FWRRKTLEELSQQEWESLCDGCGLCCLQKLEDEDDNSVYYTRIACKLLDLNTCQCSDYPN 68
Query 79 RHQSVPDCIQLTPEKLQHIRWLPSSCAYRRLNEGKNLPSWHYLNTGSRQSVIKARKSAAG 138
R VPDCIQLTP K +WLPS+C YR ++EGK+LP+WH+L G RQ V + R S +G
Sbjct 69 RFAQVPDCIQLTPGKADQFKWLPSTCGYRLVSEGKDLPAWHHLVCGDRQQVHEQRISQSG 128
Query 139 RCISETDVQEDDIEDYIV 156
R +SE DV EDD ED+++
Sbjct 129 RMLSEHDVHEDDWEDHLI 146
Score = 15.0 bits (27), Expect = 5.3
Identities = 7/20 (35%), Positives = 8/20 (40%), Gaps = 0/20 (0%)
Query 138 GRCISETDVQEDDIEDYIVR 157
G C + EDD Y R
Sbjct 31 GLCCLQKLEDEDDNSVYYTR 50
>A5W002 UPF0260 protein Pput_1301 [Pseudomonas putida (strain
ATCC 700007 / DSM 6899 / BCRC 17059 / F1)]
Length=149
Score = 184 bits (467), Expect = 1e-64
Identities = 80/138 (58%), Positives = 103/138 (75%), Gaps = 0/138 (0%)
Query 19 FWKHYALDALNQAEWEALCDGCGLCCLIKLEDEETNEIAYTKVACKLLDCKTARCSDYAD 78
FW+ L+ L+Q EWE+LCDGCGLCCL KLEDE+ N + YT++ACKLLD T +CSDY +
Sbjct 8 FWRRKTLEQLSQQEWESLCDGCGLCCLQKLEDEDDNSVYYTRIACKLLDLDTCQCSDYPN 67
Query 79 RHQSVPDCIQLTPEKLQHIRWLPSSCAYRRLNEGKNLPSWHYLNTGSRQSVIKARKSAAG 138
R VPDCIQLTP K +WLPS+C YR ++EGK+LP+WH+L G RQ V + R S +G
Sbjct 68 RFAHVPDCIQLTPGKADQFKWLPSTCGYRLVSEGKDLPAWHHLVCGDRQQVHEQRISQSG 127
Query 139 RCISETDVQEDDIEDYIV 156
R +SE DV EDD ED+++
Sbjct 128 RMLSEHDVHEDDWEDHLI 145
Score = 15.0 bits (27), Expect = 5.2
Identities = 7/20 (35%), Positives = 8/20 (40%), Gaps = 0/20 (0%)
Query 138 GRCISETDVQEDDIEDYIVR 157
G C + EDD Y R
Sbjct 30 GLCCLQKLEDEDDNSVYYTR 49
>Q1I6K6 UPF0260 protein PSEEN4031 [Pseudomonas entomophila (strain
L48)]
Length=149
Score = 183 bits (465), Expect = 3e-64
Identities = 81/146 (55%), Positives = 106/146 (73%), Gaps = 1/146 (1%)
Query 11 MNPELRPFFWKHYALDALNQAEWEALCDGCGLCCLIKLEDEETNEIAYTKVACKLLDCKT 70
MN + PF W+ LD L+ EWE+LCDGCGLCCL KLEDEE N + YT +ACKLLD +T
Sbjct 1 MNADTAPF-WRRKTLDQLDSKEWESLCDGCGLCCLQKLEDEEDNSVYYTSIACKLLDLQT 59
Query 71 ARCSDYADRHQSVPDCIQLTPEKLQHIRWLPSSCAYRRLNEGKNLPSWHYLNTGSRQSVI 130
+CSDY +R + VPDCIQLTP K +WLP +C YR ++EG++LP+WH+L +G R V
Sbjct 60 CQCSDYPNRFKHVPDCIQLTPGKADQFKWLPPTCGYRLVSEGQDLPAWHHLVSGDRTQVH 119
Query 131 KARKSAAGRCISETDVQEDDIEDYIV 156
+ R S +GR +SE DV EDD ED+++
Sbjct 120 EQRISRSGRMLSENDVDEDDWEDHLI 145
>Q4ZW57 UPF0260 protein Psyr_1567 [Pseudomonas syringae pv. syringae
(strain B728a)]
Length=149
Score = 182 bits (463), Expect = 5e-64
Identities = 81/138 (59%), Positives = 101/138 (73%), Gaps = 0/138 (0%)
Query 19 FWKHYALDALNQAEWEALCDGCGLCCLIKLEDEETNEIAYTKVACKLLDCKTARCSDYAD 78
FW LD L+ EWE+LCDGCGLCCL KLEDEE N + YT++ACKLLD KT +CSDYA+
Sbjct 8 FWMRKTLDQLDTQEWESLCDGCGLCCLQKLEDEEDNAVYYTRIACKLLDLKTCQCSDYAN 67
Query 79 RHQSVPDCIQLTPEKLQHIRWLPSSCAYRRLNEGKNLPSWHYLNTGSRQSVIKARKSAAG 138
R SVPDCIQLTP + +WLP +C YR ++EGK+LP WH+L G R +V R S +G
Sbjct 68 RRASVPDCIQLTPGQADEFKWLPPTCGYRLVSEGKDLPLWHHLVCGDRTAVHHERISQSG 127
Query 139 RCISETDVQEDDIEDYIV 156
R +SE +V EDD EDY++
Sbjct 128 RMLSENNVAEDDWEDYLI 145
>Q87Y85 UPF0260 protein PSPTO_3918 [Pseudomonas syringae pv. tomato
(strain ATCC BAA-871 / DC3000)]
Length=149
Score = 182 bits (461), Expect = 1e-63
Identities = 81/138 (59%), Positives = 101/138 (73%), Gaps = 0/138 (0%)
Query 19 FWKHYALDALNQAEWEALCDGCGLCCLIKLEDEETNEIAYTKVACKLLDCKTARCSDYAD 78
FW LD L+ EWE+LCDGCGLCCL KLEDEE N + YT++ACKLLD KT +CSDYA+
Sbjct 8 FWIRKTLDQLDTQEWESLCDGCGLCCLQKLEDEEDNSVYYTRIACKLLDLKTCQCSDYAN 67
Query 79 RHQSVPDCIQLTPEKLQHIRWLPSSCAYRRLNEGKNLPSWHYLNTGSRQSVIKARKSAAG 138
R SVPDCIQLTP + +WLP +C YR ++EGK+LP WH+L G R +V R S +G
Sbjct 68 RRASVPDCIQLTPGQADEFKWLPPTCGYRLVSEGKDLPLWHHLVCGDRTAVHHERISQSG 127
Query 139 RCISETDVQEDDIEDYIV 156
R +SE +V EDD EDY++
Sbjct 128 RMLSEKNVAEDDWEDYLI 145
>B0KSS1 UPF0260 protein PputGB1_4117 [Pseudomonas putida (strain
GB-1)]
Length=150
Score = 180 bits (457), Expect = 5e-63
Identities = 78/138 (57%), Positives = 101/138 (73%), Gaps = 0/138 (0%)
Query 19 FWKHYALDALNQAEWEALCDGCGLCCLIKLEDEETNEIAYTKVACKLLDCKTARCSDYAD 78
FW+ L+ L+ EWEALCDGCGLCCL KLEDE+ N + YT++ACKLLD + +CSDY +
Sbjct 9 FWRRKTLEQLSPQEWEALCDGCGLCCLQKLEDEDDNSVYYTRIACKLLDLDSCQCSDYPN 68
Query 79 RHQSVPDCIQLTPEKLQHIRWLPSSCAYRRLNEGKNLPSWHYLNTGSRQSVIKARKSAAG 138
R VPDCIQLTP K +WLPS+C YR ++EGK+LP+WH+L G RQ V + R S +G
Sbjct 69 RFAQVPDCIQLTPGKADQFKWLPSTCGYRLVSEGKDLPAWHHLVCGDRQQVHEQRISQSG 128
Query 139 RCISETDVQEDDIEDYIV 156
R + E DV EDD ED+++
Sbjct 129 RMLREQDVHEDDWEDHLI 146
Score = 15.0 bits (27), Expect = 5.3
Identities = 7/20 (35%), Positives = 8/20 (40%), Gaps = 0/20 (0%)
Query 138 GRCISETDVQEDDIEDYIVR 157
G C + EDD Y R
Sbjct 31 GLCCLQKLEDEDDNSVYYTR 50
>Q48LC2 UPF0260 protein PSPPH_1551 [Pseudomonas savastanoi pv.
phaseolicola (strain 1448A / Race 6)]
Length=149
Score = 179 bits (455), Expect = 9e-63
Identities = 80/138 (58%), Positives = 99/138 (72%), Gaps = 0/138 (0%)
Query 19 FWKHYALDALNQAEWEALCDGCGLCCLIKLEDEETNEIAYTKVACKLLDCKTARCSDYAD 78
FW LD L+ EWE+LCDGCGLCCL KLEDEE N + YT++ACKLLD T +CSDYA+
Sbjct 8 FWIRKTLDQLSTEEWESLCDGCGLCCLQKLEDEEDNSVYYTRIACKLLDLTTCQCSDYAN 67
Query 79 RHQSVPDCIQLTPEKLQHIRWLPSSCAYRRLNEGKNLPSWHYLNTGSRQSVIKARKSAAG 138
R SVPDCIQLTP + +WLP +C YR ++EGK+LP WH+L G R +V R S +G
Sbjct 68 RRASVPDCIQLTPGQADEFKWLPPTCGYRLVSEGKDLPLWHHLVCGDRTAVHHERISQSG 127
Query 139 RCISETDVQEDDIEDYIV 156
R +SE V EDD EDY++
Sbjct 128 RMLSENSVAEDDWEDYLI 145
>Q4KGK7 UPF0260 protein PFL_1499 [Pseudomonas fluorescens (strain
ATCC BAA-477 / NRRL B-23932 / Pf-5)]
Length=149
Score = 176 bits (446), Expect = 2e-61
Identities = 77/138 (56%), Positives = 100/138 (72%), Gaps = 0/138 (0%)
Query 19 FWKHYALDALNQAEWEALCDGCGLCCLIKLEDEETNEIAYTKVACKLLDCKTARCSDYAD 78
FW L+ L+Q EWE+LCDGCGLCCL KLEDE+ N + YT++ACKLLD KT +CSDY +
Sbjct 8 FWIRKTLEQLDQDEWESLCDGCGLCCLQKLEDEDDNSVYYTRIACKLLDLKTCQCSDYPN 67
Query 79 RHQSVPDCIQLTPEKLQHIRWLPSSCAYRRLNEGKNLPSWHYLNTGSRQSVIKARKSAAG 138
R SVPDCIQLTP K +WLP +C YR ++EGK+LP WH+L G R +V R S +G
Sbjct 68 RRDSVPDCIQLTPGKADEFKWLPRTCGYRLVSEGKDLPLWHHLVCGDRDAVHHERISQSG 127
Query 139 RCISETDVQEDDIEDYIV 156
R ++E V E+D ED+++
Sbjct 128 RMLAEGSVAEEDWEDHLI 145
Score = 15.0 bits (27), Expect = 5.2
Identities = 7/20 (35%), Positives = 8/20 (40%), Gaps = 0/20 (0%)
Query 138 GRCISETDVQEDDIEDYIVR 157
G C + EDD Y R
Sbjct 30 GLCCLQKLEDEDDNSVYYTR 49
>C1DPM9 UPF0260 protein Avin_32930 [Azotobacter vinelandii (strain
DJ / ATCC BAA-1303)]
Length=149
Score = 176 bits (445), Expect = 3e-61
Identities = 79/138 (57%), Positives = 101/138 (73%), Gaps = 0/138 (0%)
Query 19 FWKHYALDALNQAEWEALCDGCGLCCLIKLEDEETNEIAYTKVACKLLDCKTARCSDYAD 78
FWK LD L+ EWE+LCDGCGLCCL KLEDEE + YT++AC+LLD +T RC DYA+
Sbjct 8 FWKRKTLDRLDAEEWESLCDGCGLCCLQKLEDEEDGSVYYTRIACRLLDLETCRCRDYAN 67
Query 79 RHQSVPDCIQLTPEKLQHIRWLPSSCAYRRLNEGKNLPSWHYLNTGSRQSVIKARKSAAG 138
R +SVPDCIQLTP + +WLP +CAYR L EG++LP WH L G Q+V + R S AG
Sbjct 68 RRRSVPDCIQLTPAQAGEFQWLPPTCAYRLLAEGEDLPLWHPLVCGDPQAVHRERISRAG 127
Query 139 RCISETDVQEDDIEDYIV 156
R +SE+ V EDD E++++
Sbjct 128 RMLSESAVAEDDWEEHLI 145
>Q3KGH1 UPF0260 protein Pfl01_1392 [Pseudomonas fluorescens (strain
Pf0-1)]
Length=149
Score = 175 bits (444), Expect = 4e-61
Identities = 77/138 (56%), Positives = 100/138 (72%), Gaps = 0/138 (0%)
Query 19 FWKHYALDALNQAEWEALCDGCGLCCLIKLEDEETNEIAYTKVACKLLDCKTARCSDYAD 78
FW LD L+ EWE+LCDGCGLCCL KLEDEE N + YT++ACKLLD KT +CSDY +
Sbjct 8 FWIRKTLDQLDHEEWESLCDGCGLCCLQKLEDEEDNSVYYTRIACKLLDLKTCQCSDYPN 67
Query 79 RHQSVPDCIQLTPEKLQHIRWLPSSCAYRRLNEGKNLPSWHYLNTGSRQSVIKARKSAAG 138
R + VPDCIQLTP + + +WLP +C YR ++EGK+LP WH+L G R +V R S +G
Sbjct 68 RMKFVPDCIQLTPGQAEEFKWLPPTCGYRLVSEGKDLPLWHHLVCGDRDAVHHERISQSG 127
Query 139 RCISETDVQEDDIEDYIV 156
R ++E V EDD ED+++
Sbjct 128 RMLAEGSVPEDDWEDHLI 145
Lambda K H a alpha
0.326 0.138 0.466 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 151188
Database: aa01cbbe18453dd1780188bcd98eddcf.SwissProt.fasta
Posted date: May 20, 2024 7:01 AM
Number of letters in database: 1,492
Number of sequences in database: 10
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
