BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: fda472c2f758813432194a2a89cda0e4.SwissProt.fasta
19 sequences; 4,254 total letters
Query= ACIAD3591
Length=222
Score E
Sequences producing significant alignments: (Bits) Value
P0AFT4 L-cystine transport system permease protein TcyL [Shigella... 137 8e-44
P0AFT3 L-cystine transport system permease protein TcyL [Escheric... 137 8e-44
P0AFT2 L-cystine transport system permease protein TcyL [Escheric... 137 8e-44
P42399 Probable amino-acid ABC transporter permease protein YckA ... 134 1e-42
P45023 Probable amino-acid ABC transporter permease protein HI_01... 122 6e-38
P54953 Probable amino-acid permease protein YxeN [Bacillus subtil... 118 2e-36
O34671 Probable glutamine ABC transporter permease protein GlnM [... 115 2e-35
P42200 L-cystine transport system permease protein TcyB [Bacillus... 115 3e-35
P52625 Probable amino-acid ABC transporter permease protein PatM ... 113 2e-34
P0AEQ7 Glutamine transport system permease protein GlnP [Escheric... 112 3e-34
P0AEQ8 Glutamine transport system permease protein GlnP [Escheric... 112 3e-34
P0AEQ9 Glutamine transport system permease protein GlnP [Shigella... 112 3e-34
P0AEQ6 Glutamine transport system permease protein GlnP [Escheric... 112 3e-34
Q4UKC4 Putative glutamine transport system permease protein GlnP ... 107 3e-32
Q1RHC0 Putative glutamine transport system permease protein GlnP ... 105 2e-31
P35113 Nopaline transport system permease protein NocM [Agrobacte... 105 2e-31
O34315 L-cystine transport system permease protein TcyL [Bacillus... 100 2e-29
O34606 Probable glutamine ABC transporter permease protein GlnP [... 98.2 1e-28
P35114 Octopine transport system permease protein OccM [Rhizobium... 98.6 1e-28
>P0AFT4 L-cystine transport system permease protein TcyL [Shigella
flexneri]
Length=222
Score = 137 bits (345), Expect = 8e-44
Identities = 75/206 (36%), Positives = 119/206 (58%), Gaps = 0/206 (0%)
Query 10 DIIQNLLHGLGWSLLLSLMVFLLGGICGLLILMLRINPDPILQKVAIVYIEFFQGTPLLI 69
D + LL G G++L LS+ G + G ++ ++R++P ++ +A YI F+GTPL+
Sbjct 10 DSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIA 69
Query 70 QLFMTFFGLSLLGIDISPWTAAAFSLTAYAAAYFAEIWRGCVQSIPVGQWEAAASLAMTR 129
QLFM ++GL GI++ P +A L+ AAY AE R + SI GQWEAAAS+ MT
Sbjct 70 QLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTP 129
Query 130 LQQFRYVILPQAIRIAIAPTVGFSVQIVKATAVTSIIGFTELTKTGSVLANATFEPFLVF 189
Q R ILPQA R+A+ P + +VK T++ + I EL + ++ + T E F ++
Sbjct 130 WQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMY 189
Query 190 GLVAIGYFILCYPLSALAAYLEKKLH 215
++ Y+I+ LS L + E +L+
Sbjct 190 LAASLIYWIMATVLSTLQNHFENQLN 215
>P0AFT3 L-cystine transport system permease protein TcyL [Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=222
Score = 137 bits (345), Expect = 8e-44
Identities = 75/206 (36%), Positives = 119/206 (58%), Gaps = 0/206 (0%)
Query 10 DIIQNLLHGLGWSLLLSLMVFLLGGICGLLILMLRINPDPILQKVAIVYIEFFQGTPLLI 69
D + LL G G++L LS+ G + G ++ ++R++P ++ +A YI F+GTPL+
Sbjct 10 DSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIA 69
Query 70 QLFMTFFGLSLLGIDISPWTAAAFSLTAYAAAYFAEIWRGCVQSIPVGQWEAAASLAMTR 129
QLFM ++GL GI++ P +A L+ AAY AE R + SI GQWEAAAS+ MT
Sbjct 70 QLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTP 129
Query 130 LQQFRYVILPQAIRIAIAPTVGFSVQIVKATAVTSIIGFTELTKTGSVLANATFEPFLVF 189
Q R ILPQA R+A+ P + +VK T++ + I EL + ++ + T E F ++
Sbjct 130 WQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMY 189
Query 190 GLVAIGYFILCYPLSALAAYLEKKLH 215
++ Y+I+ LS L + E +L+
Sbjct 190 LAASLIYWIMATVLSTLQNHFENQLN 215
>P0AFT2 L-cystine transport system permease protein TcyL [Escherichia
coli (strain K12)]
Length=222
Score = 137 bits (345), Expect = 8e-44
Identities = 75/206 (36%), Positives = 119/206 (58%), Gaps = 0/206 (0%)
Query 10 DIIQNLLHGLGWSLLLSLMVFLLGGICGLLILMLRINPDPILQKVAIVYIEFFQGTPLLI 69
D + LL G G++L LS+ G + G ++ ++R++P ++ +A YI F+GTPL+
Sbjct 10 DSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIA 69
Query 70 QLFMTFFGLSLLGIDISPWTAAAFSLTAYAAAYFAEIWRGCVQSIPVGQWEAAASLAMTR 129
QLFM ++GL GI++ P +A L+ AAY AE R + SI GQWEAAAS+ MT
Sbjct 70 QLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTP 129
Query 130 LQQFRYVILPQAIRIAIAPTVGFSVQIVKATAVTSIIGFTELTKTGSVLANATFEPFLVF 189
Q R ILPQA R+A+ P + +VK T++ + I EL + ++ + T E F ++
Sbjct 130 WQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMY 189
Query 190 GLVAIGYFILCYPLSALAAYLEKKLH 215
++ Y+I+ LS L + E +L+
Sbjct 190 LAASLIYWIMATVLSTLQNHFENQLN 215
>P42399 Probable amino-acid ABC transporter permease protein YckA
[Bacillus subtilis (strain 168)]
Length=226
Score = 134 bits (338), Expect = 1e-42
Identities = 69/199 (35%), Positives = 118/199 (59%), Gaps = 0/199 (0%)
Query 15 LLHGLGWSLLLSLMVFLLGGICGLLILMLRINPDPILQKVAIVYIEFFQGTPLLIQLFMT 74
++ G+G++LL+S + G + GL I + R++ +L+ A +YI F +G P+L+ LF+
Sbjct 23 VIKGIGYTLLISFVSMFAGTVIGLFISLARMSKLALLRWPAKLYISFMRGVPILVILFIL 82
Query 75 FFGLSLLGIDISPWTAAAFSLTAYAAAYFAEIWRGCVQSIPVGQWEAAASLAMTRLQQFR 134
+FG +GI+ S TAA + +AAY AEI R + S+ GQWEAA+SL ++ Q R
Sbjct 83 YFGFPYIGIEFSAVTAALIGFSLNSAAYIAEINRSAISSVEKGQWEAASSLGLSYWQTMR 142
Query 135 YVILPQAIRIAIAPTVGFSVQIVKATAVTSIIGFTELTKTGSVLANATFEPFLVFGLVAI 194
+ILPQ+IRIA+ P + ++KA+++ ++I EL + ++ F+ ++ L A+
Sbjct 143 GIILPQSIRIALPPLANVLLDLIKASSLAAMITVPELLQHAKIIGGREFDYMTMYILTAL 202
Query 195 GYFILCYPLSALAAYLEKK 213
Y+ +C + LEKK
Sbjct 203 IYWAICSIAAVFQNILEKK 221
>P45023 Probable amino-acid ABC transporter permease protein HI_0179
[Haemophilus influenzae (strain ATCC 51907 / DSM 11121
/ KW20 / Rd)]
Length=210
Score = 122 bits (305), Expect = 6e-38
Identities = 66/199 (33%), Positives = 113/199 (57%), Gaps = 5/199 (3%)
Query 21 WSLLLSLMVFLLGGICGLLILMLRINPDP-----ILQKVAIVYIEFFQGTPLLIQLFMTF 75
++L L+++ F G + +++ ++R P P +LQ + VYI +GTP+L+Q+F+ F
Sbjct 8 YTLPLAVISFFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYISIIRGTPMLVQIFIIF 67
Query 76 FGLSLLGIDISPWTAAAFSLTAYAAAYFAEIWRGCVQSIPVGQWEAAASLAMTRLQQFRY 135
+GL +GI + P+ A + + AY AE R + +IP GQWEA+ ++ M Q F
Sbjct 68 YGLPEVGITLEPFPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMNYRQAFIR 127
Query 136 VILPQAIRIAIAPTVGFSVQIVKATAVTSIIGFTELTKTGSVLANATFEPFLVFGLVAIG 195
I+PQA+RI++ + VK T++ S++ TEL + + A +E L++ A+
Sbjct 128 TIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFRVAQNITAANYEFILIYSEAALI 187
Query 196 YFILCYPLSALAAYLEKKL 214
Y+I C+ LS L LE +L
Sbjct 188 YWIFCFVLSFLQDRLEIRL 206
>P54953 Probable amino-acid permease protein YxeN [Bacillus subtilis
(strain 168)]
Length=224
Score = 118 bits (295), Expect = 2e-36
Identities = 69/203 (34%), Positives = 114/203 (56%), Gaps = 3/203 (1%)
Query 15 LLHGLGWSLLLSLMVFLLGGICGLLILMLRINPDPILQKVAIVYIEFFQGTPLLIQLFMT 74
L+ L +L +++ + I GL++ ++ N P+L +++ +YI FF+G P L+QLF+
Sbjct 16 LIQALPITLFMAIAAMIFAIIGGLILALITKNKIPVLHQLSKLYISFFRGVPTLVQLFLI 75
Query 75 FFGLSLLGIDISPWTA---AAFSLTAYAAAYFAEIWRGCVQSIPVGQWEAAASLAMTRLQ 131
++GL L ++S TA A L+ AAY AEI+R + S+ GQ EA S+ MT+ Q
Sbjct 76 YYGLPQLFPEMSKMTALTAAIIGLSLKNAAYLAEIFRAALNSVDDGQLEACLSVGMTKFQ 135
Query 132 QFRYVILPQAIRIAIAPTVGFSVQIVKATAVTSIIGFTELTKTGSVLANATFEPFLVFGL 191
+R +ILPQAIR AI T + ++K T++ +G E+ G + A+ + F +
Sbjct 136 AYRRIILPQAIRNAIPATGNTFIGLLKETSLAFTLGVMEMFAQGKMYASGNLKYFETYLA 195
Query 192 VAIGYFILCYPLSALAAYLEKKL 214
VAI Y++L S L E+ +
Sbjct 196 VAIVYWVLTIIYSILQDLFERAM 218
>O34671 Probable glutamine ABC transporter permease protein GlnM
[Bacillus subtilis (strain 168)]
Length=216
Score = 115 bits (289), Expect = 2e-35
Identities = 68/210 (32%), Positives = 112/210 (53%), Gaps = 0/210 (0%)
Query 8 LWDIIQNLLHGLGWSLLLSLMVFLLGGICGLLILMLRINPDPILQKVAIVYIEFFQGTPL 67
L+D + G +LL S++ + G+ + ++RI LQ + Y+EF + PL
Sbjct 6 LFDNFSMYMDGFYHTLLASVIALAGSFVLGVAVAVMRITVFKPLQWLGTAYVEFIRNIPL 65
Query 68 LIQLFMTFFGLSLLGIDISPWTAAAFSLTAYAAAYFAEIWRGCVQSIPVGQWEAAASLAM 127
L+ F+ +FGL G+ + + A +LT Y +A+ AE R +QS+ GQ EAA S
Sbjct 66 LLITFVFYFGLPNAGLRLDGFQAGTVALTIYTSAFIAEAIRAGIQSVSKGQMEAARSSGF 125
Query 128 TRLQQFRYVILPQAIRIAIAPTVGFSVQIVKATAVTSIIGFTELTKTGSVLANATFEPFL 187
T Q ++ILPQAI+I I P + +VK +++ ++ +L +++++T F
Sbjct 126 TYSQAMLHIILPQAIKIVIPPLGNQFLNLVKNSSILGVVAGLDLMYQADLVSSSTLVVFD 185
Query 188 VFGLVAIGYFILCYPLSALAAYLEKKLHGS 217
V+ VA+ Y +L PLS YLEK+L S
Sbjct 186 VYIFVALFYLVLTIPLSIGVNYLEKRLEKS 215
>P42200 L-cystine transport system permease protein TcyB [Bacillus
subtilis (strain 168)]
Length=234
Score = 115 bits (288), Expect = 3e-35
Identities = 65/212 (31%), Positives = 115/212 (54%), Gaps = 6/212 (3%)
Query 9 WDIIQN-----LLHGLGWSLLLSLMVFLLGGICGLLILMLRINPDPILQKVAIVYIEFFQ 63
WD++Q L G+ +++ L+++ F+ G I L+ + R++ L+ V VY+ +
Sbjct 17 WDLVQQSFWPILSGGIYYTIPLTILSFIFGMILALITALARMSKVRPLRWVFSVYVSAIR 76
Query 64 GTPLLIQLFMTFFGLSLLGIDISPWTAAAFSLTAYAAAYFAEIWRGCVQSIPVGQWEAAA 123
GTPLL+QLF+ F+ + + P+ +A + + AY +EI R + S+P GQWEA
Sbjct 77 GTPLLVQLFIIFYLFPAFNVTLDPFPSAVIAFSLNVGAYASEIIRASILSVPKGQWEAGY 136
Query 124 SLAMTRLQQFRYVILPQAIRIAIAPTVGFSVQIVKATAVTSIIGFTELTKTGSVLANATF 183
++ MT + VILPQA R++I P + ++K T++ S I EL + +
Sbjct 137 TIGMTHQKTLFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGARNL 196
Query 184 EPFLVFGL-VAIGYFILCYPLSALAAYLEKKL 214
+ LV + A Y+I+C+ LS + +E++L
Sbjct 197 DQILVIYIEAAFIYWIICFLLSLVQHVIERRL 228
>P52625 Probable amino-acid ABC transporter permease protein PatM
[Vibrio harveyi]
Length=223
Score = 113 bits (282), Expect = 2e-34
Identities = 67/211 (32%), Positives = 121/211 (57%), Gaps = 7/211 (3%)
Query 10 DIIQNLLHGLGWSLLLSLMVFLLGGICGLLILMLRINPDPILQKVAIVYIEFFQGTPLLI 69
+++ LL LG ++ ++ + I +++ +R+ P+L +++ +YI FF+GTPLL+
Sbjct 10 ELLPILLKYLGTTMEMATWGLVFSLILSVILANIRVFKLPVLDQLSQLYISFFRGTPLLV 69
Query 70 QLFMTFFGLS-----LLGIDISPWTAAAFSLTAYAAAYFAEIWRGCVQSIPVGQWEAAAS 124
QLF+ ++GL ++GID ++AA LT + AAY AE R + I Q EA+ S
Sbjct 70 QLFLLYYGLPQIFPFMVGIDA--FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLS 127
Query 125 LAMTRLQQFRYVILPQAIRIAIAPTVGFSVQIVKATAVTSIIGFTELTKTGSVLANATFE 184
+ MT Q R VILPQA R+A+ + + + ++K+T++ +G E+ + A+++F
Sbjct 128 VGMTTTQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFR 187
Query 185 PFLVFGLVAIGYFILCYPLSALAAYLEKKLH 215
F F VA+ Y+ + L+ + + E KL+
Sbjct 188 FFEAFLAVALIYWGVVVILTRVQIWAEAKLN 218
>P0AEQ7 Glutamine transport system permease protein GlnP [Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=219
Score = 112 bits (281), Expect = 3e-34
Identities = 70/209 (33%), Positives = 111/209 (53%), Gaps = 2/209 (1%)
Query 8 LWDIIQNLLHGLGWSLLLSLMVFLLGGICGLLILMLRINPDPILQKVAIVYIEFFQGTPL 67
+W I L+ G +L +S++ G + GLL R I VA+V+IE +GTP+
Sbjct 8 IWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPI 67
Query 68 LIQLFMTFFGLSLLGID--ISPWTAAAFSLTAYAAAYFAEIWRGCVQSIPVGQWEAAASL 125
++Q+ +F L + D I P+TAA ++ + AY AEI RG V SI G EA +L
Sbjct 68 VVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLAL 127
Query 126 AMTRLQQFRYVILPQAIRIAIAPTVGFSVQIVKATAVTSIIGFTELTKTGSVLANATFEP 185
++R + RYVILP A+R + P + +K T++ +IG ELT+ G + F
Sbjct 128 GLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRA 187
Query 186 FLVFGLVAIGYFILCYPLSALAAYLEKKL 214
++ VA+ Y I+ LS + LE+++
Sbjct 188 LEIWSAVAVFYLIITLVLSFILRRLERRM 216
>P0AEQ8 Glutamine transport system permease protein GlnP [Escherichia
coli O157:H7]
Length=219
Score = 112 bits (281), Expect = 3e-34
Identities = 70/209 (33%), Positives = 111/209 (53%), Gaps = 2/209 (1%)
Query 8 LWDIIQNLLHGLGWSLLLSLMVFLLGGICGLLILMLRINPDPILQKVAIVYIEFFQGTPL 67
+W I L+ G +L +S++ G + GLL R I VA+V+IE +GTP+
Sbjct 8 IWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPI 67
Query 68 LIQLFMTFFGLSLLGID--ISPWTAAAFSLTAYAAAYFAEIWRGCVQSIPVGQWEAAASL 125
++Q+ +F L + D I P+TAA ++ + AY AEI RG V SI G EA +L
Sbjct 68 VVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLAL 127
Query 126 AMTRLQQFRYVILPQAIRIAIAPTVGFSVQIVKATAVTSIIGFTELTKTGSVLANATFEP 185
++R + RYVILP A+R + P + +K T++ +IG ELT+ G + F
Sbjct 128 GLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRA 187
Query 186 FLVFGLVAIGYFILCYPLSALAAYLEKKL 214
++ VA+ Y I+ LS + LE+++
Sbjct 188 LEIWSAVAVFYLIITLVLSFILRRLERRM 216
>P0AEQ9 Glutamine transport system permease protein GlnP [Shigella
flexneri]
Length=219
Score = 112 bits (281), Expect = 3e-34
Identities = 70/209 (33%), Positives = 111/209 (53%), Gaps = 2/209 (1%)
Query 8 LWDIIQNLLHGLGWSLLLSLMVFLLGGICGLLILMLRINPDPILQKVAIVYIEFFQGTPL 67
+W I L+ G +L +S++ G + GLL R I VA+V+IE +GTP+
Sbjct 8 IWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPI 67
Query 68 LIQLFMTFFGLSLLGID--ISPWTAAAFSLTAYAAAYFAEIWRGCVQSIPVGQWEAAASL 125
++Q+ +F L + D I P+TAA ++ + AY AEI RG V SI G EA +L
Sbjct 68 VVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLAL 127
Query 126 AMTRLQQFRYVILPQAIRIAIAPTVGFSVQIVKATAVTSIIGFTELTKTGSVLANATFEP 185
++R + RYVILP A+R + P + +K T++ +IG ELT+ G + F
Sbjct 128 GLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRA 187
Query 186 FLVFGLVAIGYFILCYPLSALAAYLEKKL 214
++ VA+ Y I+ LS + LE+++
Sbjct 188 LEIWSAVAVFYLIITLVLSFILRRLERRM 216
>P0AEQ6 Glutamine transport system permease protein GlnP [Escherichia
coli (strain K12)]
Length=219
Score = 112 bits (281), Expect = 3e-34
Identities = 70/209 (33%), Positives = 111/209 (53%), Gaps = 2/209 (1%)
Query 8 LWDIIQNLLHGLGWSLLLSLMVFLLGGICGLLILMLRINPDPILQKVAIVYIEFFQGTPL 67
+W I L+ G +L +S++ G + GLL R I VA+V+IE +GTP+
Sbjct 8 IWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPI 67
Query 68 LIQLFMTFFGLSLLGID--ISPWTAAAFSLTAYAAAYFAEIWRGCVQSIPVGQWEAAASL 125
++Q+ +F L + D I P+TAA ++ + AY AEI RG V SI G EA +L
Sbjct 68 VVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLAL 127
Query 126 AMTRLQQFRYVILPQAIRIAIAPTVGFSVQIVKATAVTSIIGFTELTKTGSVLANATFEP 185
++R + RYVILP A+R + P + +K T++ +IG ELT+ G + F
Sbjct 128 GLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRA 187
Query 186 FLVFGLVAIGYFILCYPLSALAAYLEKKL 214
++ VA+ Y I+ LS + LE+++
Sbjct 188 LEIWSAVAVFYLIITLVLSFILRRLERRM 216
>Q4UKC4 Putative glutamine transport system permease protein GlnP
[Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)]
Length=218
Score = 107 bits (267), Expect = 3e-32
Identities = 60/201 (30%), Positives = 113/201 (56%), Gaps = 1/201 (0%)
Query 15 LLHGLGWSLLLSLMVFLLGGICGLLILMLRINPDPILQKVAIVYIEFFQGTPLLIQLFMT 74
++ G +L S++ + G + G+L+ + ++N + L+ A Y F+GTPLLIQL +
Sbjct 15 IVEGTLVTLKYSVIAVIFGLVIGMLLAICKVNKNRALRLFANFYTSIFRGTPLLIQLSII 74
Query 75 FFGLS-LLGIDISPWTAAAFSLTAYAAAYFAEIWRGCVQSIPVGQWEAAASLAMTRLQQF 133
+F ++G+ S + A A S + + AY +E+ R + ++ GQ+EAA +LA+ +
Sbjct 75 YFASPYIIGVKFSVFMAGAISFSLNSGAYVSEVIRAGINAVDKGQFEAAVALAIPKFLIM 134
Query 134 RYVILPQAIRIAIAPTVGFSVQIVKATAVTSIIGFTELTKTGSVLANATFEPFLVFGLVA 193
+ +ILPQA++ V V +VK +A+ S++G +L + +++ T+ F + A
Sbjct 135 KDIILPQAVKNIFPSLVNELVNLVKESAIISMLGEMDLMRRAQIVSIETYNYFFPMFIAA 194
Query 194 IGYFILCYPLSALAAYLEKKL 214
Y+IL +S +A +EKK+
Sbjct 195 CCYYILVMLISFIAKIIEKKM 215
>Q1RHC0 Putative glutamine transport system permease protein GlnP
[Rickettsia bellii (strain RML369-C)]
Length=218
Score = 105 bits (262), Expect = 2e-31
Identities = 61/201 (30%), Positives = 111/201 (55%), Gaps = 1/201 (0%)
Query 15 LLHGLGWSLLLSLMVFLLGGICGLLILMLRINPDPILQKVAIVYIEFFQGTPLLIQLFMT 74
++ G +L S++ + G + G+L+ + ++N + L+ A Y F+GTPLLIQL +
Sbjct 15 IVEGTLITLKYSVIAVIFGLVIGVLLALCKVNKNRALRLFADFYTSIFRGTPLLIQLSII 74
Query 75 FFGLS-LLGIDISPWTAAAFSLTAYAAAYFAEIWRGCVQSIPVGQWEAAASLAMTRLQQF 133
+F L+GI + + A A S + + AY +E+ R + ++ GQ+EAA +LA+ +
Sbjct 75 YFASPYLIGIKFTVFMAGAISFSLNSGAYVSEVIRAGINAVDKGQFEAAEALAIPKFLIM 134
Query 134 RYVILPQAIRIAIAPTVGFSVQIVKATAVTSIIGFTELTKTGSVLANATFEPFLVFGLVA 193
+ +ILPQAI+ + ++K +A+ S+ G +L K +++ T+ F + A
Sbjct 135 KDIILPQAIKNIFPSLTNELINLIKESAIISMFGEMDLMKRAQIVSLETYNYFFPMIVAA 194
Query 194 IGYFILCYPLSALAAYLEKKL 214
Y+IL +S +A +EKKL
Sbjct 195 CCYYILVMLISFIARIIEKKL 215
>P35113 Nopaline transport system permease protein NocM [Agrobacterium
fabrum (strain C58 / ATCC 33970)]
Length=241
Score = 105 bits (263), Expect = 2e-31
Identities = 67/208 (32%), Positives = 114/208 (55%), Gaps = 12/208 (6%)
Query 15 LLHGLGWSLLLSLMVFLLGGICGLLILMLRINPDPILQKVAIVYIEFFQGTPLLIQLFMT 74
LL + +L L+ + L+G + + + ++R++ + I+ +A Y+ + TPLL+Q+F+
Sbjct 13 LLAAVPTTLTLAFISLLIGFVVSVPVALMRLSKNRIVSSLAYGYVYIIRSTPLLVQMFLI 72
Query 75 FFG-------LSLLGIDIS---PWTAAAFSLTAYAAAYFAEIWRGCVQSIPVGQWEAAAS 124
++G LS +G+ S PW A +L AAY +EI RG +QS+ +GQ EAA +
Sbjct 73 YYGSAQFRGVLSEVGLWSSFREPWFCAILALALNTAAYTSEIIRGGIQSVSLGQIEAARA 132
Query 125 LAMTRLQQFRYVILPQAIRIAIAPTVGFSVQ-IVKATAVTSIIGFTELTKTGSVLANATF 183
+ M+ QFR ++ P AIR A+ P G V I+K+T++ S I E+T + +AT+
Sbjct 133 VGMSTFLQFRRIVFPIAIRQAL-PAYGNEVMLIIKSTSLASTITIVEVTGLAKQIISATY 191
Query 184 EPFLVFGLVAIGYFILCYPLSALAAYLE 211
P VF + Y + + +S L E
Sbjct 192 SPVEVFIVAGAIYLFITFVVSRLVMLAE 219
>O34315 L-cystine transport system permease protein TcyL [Bacillus
subtilis (strain 168)]
Length=239
Score = 100 bits (249), Expect = 2e-29
Identities = 67/212 (32%), Positives = 110/212 (52%), Gaps = 7/212 (3%)
Query 10 DIIQNLLHGLGWSLLLSLMVFLLGGICGLLILMLRINPDPILQKVAIVYIEFFQGTPLLI 69
D + L L +L + + L G + GL + + RI PI+ ++A VYI FF+GTP+++
Sbjct 12 DFVPTLTAYLPVTLYILTLSLLFGFVLGLFLALPRIYNIPIVNQLAKVYISFFRGTPIMV 71
Query 70 QLFMTFFGL----SLLGIDIS---PWTAAAFSLTAYAAAYFAEIWRGCVQSIPVGQWEAA 122
QLF+ F+G+ L+GID S P+ AA + AA AEI R V S+ GQ EAA
Sbjct 72 QLFIVFYGIPALTGLIGIDTSKMDPFYAAVATYALSNAAAAAEIIRAGVGSVDKGQTEAA 131
Query 123 ASLAMTRLQQFRYVILPQAIRIAIAPTVGFSVQIVKATAVTSIIGFTELTKTGSVLANAT 182
S+ ++ Q FR ++LPQA+ A + +K T++ IG +++ G L ++
Sbjct 132 YSIGLSGSQAFRRIVLPQALVQAFPNMGNMVISSLKDTSLAFSIGVMDMSGRGQTLITSS 191
Query 183 FEPFLVFGLVAIGYFILCYPLSALAAYLEKKL 214
V+ ++I Y+ + EK++
Sbjct 192 NHSLEVYIALSIVYYAVAVLFEWFFRVAEKRI 223
>O34606 Probable glutamine ABC transporter permease protein GlnP
[Bacillus subtilis (strain 168)]
Length=218
Score = 98.2 bits (243), Expect = 1e-28
Identities = 64/207 (31%), Positives = 106/207 (51%), Gaps = 10/207 (5%)
Query 8 LWDIIQNLLHGLGWSLLLSLMVFLLGGICGLLILMLRINPDPILQKVAIVYIEFFQGTPL 67
LWD G +L ++ + +L GL+ LR P+L ++ V +E + PL
Sbjct 15 LWD-------GFLVTLYVAFISIILSFFFGLIAGTLRYAKVPVLSQLIAVLVETIRNLPL 67
Query 68 LIQLFMTFFGLSLLGIDISPWTAAAFSLTAYAAAYFAEIWRGCVQSIPVGQWEAAASLAM 127
L+ +F TFF L +GI + AA +LT + +A +EI R ++SI GQ EAA S +
Sbjct 68 LLIIFFTFFALPEIGIKLEITAAAITALTIFESAMLSEIIRSGLKSIDKGQIEAARSSGL 127
Query 128 TRLQQFRYVILPQAIRIAIAPTVGFSVQIVKATAVTSIIGFTELTKTGSVLANATFEP-- 185
+ Q ++++PQA+R + P V + ++K T++ +I EL ++ + +
Sbjct 128 SYTQTLFFIVMPQALRRMVPPIVSQFISLLKDTSLAVVIALPELIHNAQIINGQSADGSY 187
Query 186 -FLVFGLVAIGYFILCYPLSALAAYLE 211
F +F L A+ YF + Y LS A LE
Sbjct 188 FFPIFLLAALMYFAVNYSLSLAARRLE 214
Score = 17.3 bits (33), Expect = 4.1
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 12/77 (16%)
Query 97 AYAAAYFAEIWRGCVQSIPVGQWEAAASLAMTRLQQFRYVILPQAIRIAIAPT----VGF 152
AY+ + A +W G + ++ V A S+ ++ F + ++ +R A P +
Sbjct 6 AYSQEHLAFLWDGFLVTLYV----AFISIILS----FFFGLIAGTLRYAKVPVLSQLIAV 57
Query 153 SVQIVKATAVTSIIGFT 169
V+ ++ + II FT
Sbjct 58 LVETIRNLPLLLIIFFT 74
>P35114 Octopine transport system permease protein OccM [Rhizobium
radiobacter]
Length=245
Score = 98.6 bits (244), Expect = 1e-28
Identities = 68/214 (32%), Positives = 110/214 (51%), Gaps = 11/214 (5%)
Query 8 LWDIIQNLLHGLGWSLLLSLMVFLLGGICGLLILMLRINPDPILQKVAIVYIEFFQGTPL 67
LW LL G+ +L L++ LG + + ++R++ L A YI F+GTPL
Sbjct 8 LWQTFVALLSGIPLALQLAVFSVALGTVLAFGLALMRVSRLWWLDLPARFYIFAFRGTPL 67
Query 68 LIQLFMTFFGLSLLG----------IDISPWTAAAFSLTAYAAAYFAEIWRGCVQSIPVG 117
L+Q+++ ++GLS + + W A A +L AAY AEI RG + S+P G
Sbjct 68 LVQIYIIYYGLSQFPDVRHSFIWPFLRDAYWCAMA-ALALNTAAYTAEIMRGGLLSVPAG 126
Query 118 QWEAAASLAMTRLQQFRYVILPQAIRIAIAPTVGFSVQIVKATAVTSIIGFTELTKTGSV 177
Q EAA + M R++ FR +++PQAIR + + +VK+T++ S I E+T +
Sbjct 127 QIEAAKACGMGRVKLFRRIVIPQAIRQMLPGYSNEVILMVKSTSLASTITIMEITGIAAK 186
Query 178 LANATFEPFLVFGLVAIGYFILCYPLSALAAYLE 211
L + ++ VF Y IL + ++ L LE
Sbjct 187 LISESYRTVEVFSCAGAIYLILNFIVARLFTLLE 220
Lambda K H a alpha
0.332 0.143 0.444 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 622080
Database: fda472c2f758813432194a2a89cda0e4.SwissProt.fasta
Posted date: May 9, 2024 12:30 PM
Number of letters in database: 4,254
Number of sequences in database: 19
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
