BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 3581c7d54a366461faa8c54c3b0c8d88.SwissProt.fasta
11 sequences; 4,190 total letters
Query= ACIAD3552
Length=436
Score E
Sequences producing significant alignments: (Bits) Value
P39385 Uncharacterized protein YjiN [Escherichia coli (strain K12)] 171 4e-52
Q929E9 UPF0754 membrane protein lin2327 [Listeria innocua serovar... 50.1 4e-10
B8DF86 UPF0754 membrane protein LMHCC_0318 [Listeria monocytogene... 46.2 7e-09
Q5L2A6 UPF0754 membrane protein GK0639 [Geobacillus kaustophilus ... 45.4 1e-08
A4IKS8 UPF0754 membrane protein GTNG_0550 [Geobacillus thermodeni... 44.7 2e-08
Q8Y552 UPF0754 membrane protein lmo2224 [Listeria monocytogenes s... 43.9 4e-08
Q5WHV2 UPF0754 membrane protein ABC1518 [Shouchella clausii (stra... 43.9 4e-08
B7GF17 UPF0754 membrane protein Aflv_2299 [Anoxybacillus flavithe... 43.1 7e-08
A0AKX7 UPF0754 membrane protein lwe2241 [Listeria welshimeri sero... 42.0 2e-07
C1KXH9 UPF0754 membrane protein Lm4b_02251 [Listeria monocytogene... 41.6 2e-07
Q71XE1 UPF0754 membrane protein LMOf2365_2257 [Listeria monocytog... 41.6 2e-07
>P39385 Uncharacterized protein YjiN [Escherichia coli (strain
K12)]
Length=426
Score = 171 bits (433), Expect = 4e-52
Identities = 122/422 (29%), Positives = 209/422 (50%), Gaps = 14/422 (3%)
Query 12 LHRSKRLATIALISAVVAWIILMVTAKFFPDYAWLIHILMLAAEAGVVGGLADWYAITVL 71
L R+KRLA L+ A +++ + F P W+ + +A EA +VG LADW+A+ L
Sbjct 7 LRRAKRLALSLLLIAAATFVVTL----FLPPNFWVSGVKAIA-EAAMVGALADWFAVVAL 61
Query 72 FRNPFGKIPIPKFLLDHTEIIPRNKARIAESMGRFVQENFLSPQVVERSLNKTDLSLAIG 131
FR ++PIP + HT IIPRNK RI E++G+FVQE FL Q + + + + +L IG
Sbjct 62 FR----RVPIP-IISRHTAIIPRNKDRIGENLGQFVQEKFLDTQSLVALIRRHEPALLIG 116
Query 132 QWLENPKNNTQVVELIQQTVPKIFEFVGQEQIAQFIQNNSVQWVKSTKINTLASEMLRAV 191
W P+N +V + + Q + E +I + ++ + + ++ ++ ML ++
Sbjct 117 NWFSQPENARRVGQHLLQIMSGFLELTDDARIQRLLKRAVHRAIDKVDLSGTSALMLESM 176
Query 192 LENDFHQ---DVLQRGLDLAHEWIVTHPEQARELTATLFKELGVWKLAKGASWIGIDVQQ 248
+ND HQ D L L + + A+++ L E + W+G +
Sbjct 177 TKNDRHQVLLDTLIAQLIALLQRDKSRKFIAQQIVRWLESEHPLKAKILPTEWLGEHSAE 236
Query 249 RTIDSLIEKVESMLADPEHPWRQGIEQYTQELMLKLSDSESEASLRLNTGKDALLDSPQV 308
D++ ++ + D H R ++ T L+ KL ++ E + R + K L +
Sbjct 237 LVSDAVNSLLDDISRDRAHQIRHAFDRATFALIDKLK-NDPEMAARADAVKSYLKEDEAF 295
Query 309 LNFISGAVVILCDAIKRDLLKSNSGIAENLRVAIQQVGHNLVQNMAVRHVLNERMTGLAI 368
++S L + +K D+ +S + E + A Q G L+ + A+R LN + A
Sbjct 296 NRYLSELWGDLREWLKVDINSEDSRVKERIARAGQWFGETLIADDALRASLNGHLEQAAH 355
Query 369 TFSHQYSDKIIRYISSRIHEWDSSEMIGKIENEVGGDLHMIRVNGVVVGAFIGLILGIIR 428
+ ++S + R+IS + WD+ +M +IE +G DL IRVNG +VG IGLIL ++
Sbjct 356 RVAPEFSAFLTRHISDTVKSWDARDMSRQIELNIGKDLQFIRVNGTLVGGCIGLILYLLS 415
Query 429 AL 430
L
Sbjct 416 QL 417
>Q929E9 UPF0754 membrane protein lin2327 [Listeria innocua serovar
6a (strain ATCC BAA-680 / CLIP 11262)]
Length=377
Score = 50.1 bits (118), Expect = 4e-10
Identities = 87/416 (21%), Positives = 170/416 (41%), Gaps = 80/416 (19%)
Query 46 LIHILMLAAEAGVVGGLADWYAITVLFRNPFGKIPIPKFLLDHTE-IIPRNKARIAESMG 104
L IL++A G +G + ++ AI +LFR P+ + + L T +IP+ + +AE +G
Sbjct 4 LFTILLMAVIGGFIGAMTNYIAIRMLFR-PYKAVYLFNKRLPFTPGLIPKRRDELAEHIG 62
Query 105 RFVQENFLSPQVVERSLNKTDLSLAIGQWLENPKNNTQVVELIQQTVPKIFEFVGQEQIA 164
+ V + L+ + L +L + + + + +E T ++ +G E
Sbjct 63 KVVVSHLLTEDAIRARLLDENLQREVTETITKMFHEKMKLE---TTPNELLHHLGYEN-- 117
Query 165 QFIQNNSVQWVK-----------STKINTLASEMLRAVLENDFHQ---DVLQRGLDLAHE 210
+ S+ W++ +TK +T SE++ ++LEN+ + V +R
Sbjct 118 --AEVRSISWLERTLEIEISRFLTTKQSTQMSELIPSMLENELTKKLPHVTERITSKMSV 175
Query 211 WIVTHPE--QARELTATLFKELGVWKLAKGASWIGIDVQQRTIDSLIEKVESMLADPEHP 268
+I + Q +++ F+E G K+ A IDS EK++
Sbjct 176 FIASEAGKIQIKQMLQKFFEEHG--KMGSMARMF------INIDSFSEKIQ--------- 218
Query 269 WRQGIEQYTQELMLKLSDSESEASLRLNTGKDALLDSPQVLNFISGAVVILCDAIKRDLL 328
++G++ QE D+++ + L T + NF + + L K+ L
Sbjct 219 -QEGLKLINQE------DTKNIINQLLTT---------EWHNFEAKELQELIPTEKQAHL 262
Query 329 KSNSGIAENLRVAIQQVGHNLVQNMAVRHVLN---------------ERMTGLAITFSHQ 373
+ IQ V H + N ++ +L ERM T S +
Sbjct 263 -----AGQLTSEIIQAVPHEKLFNQPIQGILRNYESAITEKMIPFAVERMLDFVATHSAE 317
Query 374 YSDK--IIRYISSRIHEWDSSEMIGKIENEVGGDLHMIRVNGVVVGAFIGLILGII 427
++ + + + ++I + E+ + G +L MI G ++G FIG+I GI+
Sbjct 318 IVERMDLAKLVETQIATFSLPEIEKLVVEISGRELKMITYLGGILGGFIGIIQGIL 373
>B8DF86 UPF0754 membrane protein LMHCC_0318 [Listeria monocytogenes
serotype 4a (strain HCC23)]
Length=377
Score = 46.2 bits (108), Expect = 7e-09
Identities = 85/407 (21%), Positives = 168/407 (41%), Gaps = 62/407 (15%)
Query 46 LIHILMLAAEAGVVGGLADWYAITVLFRNPFGKIPIPKFLLDHTE-IIPRNKARIAESMG 104
L IL++A G +G + ++ AI +LFR P+ I + L T +IP+ + +AE +G
Sbjct 4 LFTILLMAVIGGFIGAMTNYIAIRMLFR-PYKAIYLFNKRLPFTPGLIPKRRDELAEHIG 62
Query 105 RFVQENFLSPQVVERSLNKTDLSLAIGQWLENPKNNTQVVELIQQTVPKIFEFVGQEQIA 164
+ V + L+ + L +L I + + +E T ++ G E
Sbjct 63 KVVVSHLLTEDAIRARLLDENLQKEITDTITKMFHEKMQLE---TTPNELLHHFGYEN-- 117
Query 165 QFIQNNSVQWVK-----------STKINTLASEMLRAVLENDFH---QDVLQRGLDLAHE 210
+ S+ W++ STK T S+++ +LE++ V +R
Sbjct 118 --AEIRSMAWIEKTMEKEINHFLSTKKTTKMSDLIPTMLESELTTKLPHVTERITSKMAL 175
Query 211 WIVTH--PEQARELTATLFKELGVWKLAKGASWIGIDVQQRTIDSLIEKVESMLADPEHP 268
++ + Q +++ F+E G K+ A +DS EK+
Sbjct 176 FVASEEGKSQIKQMLQKFFEEHG--KMGSMARMF------INVDSFSEKI---------- 217
Query 269 WRQGIEQYTQELMLKLSDSESEASL--RLNTGKDALLDSPQVLNFI-SGAVVILCDAIKR 325
Q+ LKL D E +L +L T + ++ ++ I + V L +
Sbjct 218 ---------QQEGLKLIDQEDTKNLINQLLTTEWKNFEAKELQELIPTEKQVHLAGQLTS 268
Query 326 DLLKS---NSGIAENLRVAIQQVGHNLVQNMAVRHVLNERMTGLAITFSHQYSDK--IIR 380
+L+++ + ++V ++ +V+ + V ERM T S + ++ + +
Sbjct 269 ELIQTFPHEKLFNQPIQVILRNYETTIVEKVIPFAV--ERMLDFVATHSAEIVERMDLAK 326
Query 381 YISSRIHEWDSSEMIGKIENEVGGDLHMIRVNGVVVGAFIGLILGII 427
+ ++I + E+ + G +L MI G ++G FIG+I GI+
Sbjct 327 LVETQIATFSLPEIEKLVVEISGRELKMITYLGGILGGFIGVIQGIL 373
>Q5L2A6 UPF0754 membrane protein GK0639 [Geobacillus kaustophilus
(strain HTA426)]
Length=377
Score = 45.4 bits (106), Expect = 1e-08
Identities = 22/87 (25%), Positives = 46/87 (53%), Gaps = 0/87 (0%)
Query 47 IHILMLAAEAGVVGGLADWYAITVLFRNPFGKIPIPKFLLDHTEIIPRNKARIAESMGRF 106
+++L + A ++GG+ ++ AI +LFR K L +IP+ + +AE +G+
Sbjct 5 VYLLFMVAVGALIGGVTNFIAIVMLFRPYEPMYVFGKRLPFTPGLIPKRRRELAEQLGKT 64
Query 107 VQENFLSPQVVERSLNKTDLSLAIGQW 133
V E+ ++P+ + R L + + +W
Sbjct 65 VVEHLVTPEGLRRKLMDPSFTAEMAEW 91
>A4IKS8 UPF0754 membrane protein GTNG_0550 [Geobacillus thermodenitrificans
(strain NG80-2)]
Length=377
Score = 44.7 bits (104), Expect = 2e-08
Identities = 25/88 (28%), Positives = 48/88 (55%), Gaps = 2/88 (2%)
Query 47 IHILMLAAEAGVVGGLADWYAITVLFRNPFGKIPIPKFLLDHTE-IIPRNKARIAESMGR 105
+++L + A ++GG+ ++ AI +LFR P+ I I L T +IP+ + +AE +G+
Sbjct 5 VYLLFMMAVGALIGGMTNFIAIVMLFR-PYEPIYIFGKRLPLTPGLIPKRRRELAEQLGK 63
Query 106 FVQENFLSPQVVERSLNKTDLSLAIGQW 133
V E+ ++P+ + R L + W
Sbjct 64 TVVEHLVTPEGLRRKLTDPVFVAEVADW 91
Score = 24.3 bits (51), Expect = 0.063
Identities = 11/23 (48%), Positives = 15/23 (65%), Gaps = 0/23 (0%)
Query 405 DLHMIRVNGVVVGAFIGLILGII 427
+L MI G ++GA IG + GII
Sbjct 351 ELKMITYLGALLGAMIGAVQGII 373
Score = 21.9 bits (45), Expect = 0.33
Identities = 16/57 (28%), Positives = 26/57 (46%), Gaps = 3/57 (5%)
Query 359 LNERMTGLAITFSHQYSDKIIRYISSRIHEWDSSEMIGKIENE---VGGDLHMIRVN 412
L E M + + +D++I Y SS + + MI + E VGG + M+ N
Sbjct 154 LKETMESRIESLADYLADRVIDYFSSEEGKRQIAGMIDRFFQERGMVGGMMQMLLGN 210
>Q8Y552 UPF0754 membrane protein lmo2224 [Listeria monocytogenes
serovar 1/2a (strain ATCC BAA-679 / EGD-e)]
Length=377
Score = 43.9 bits (102), Expect = 4e-08
Identities = 85/397 (21%), Positives = 157/397 (40%), Gaps = 42/397 (11%)
Query 46 LIHILMLAAEAGVVGGLADWYAITVLFRNPFGKIPIPKFLLDHTE-IIPRNKARIAESMG 104
L IL++A G +G + ++ AI +LFR P+ I + L T +IP+ + +AE +G
Sbjct 4 LFTILLMAVIGGFIGAMTNYIAIRMLFR-PYKAIYLFNKRLPFTPGLIPKRRDELAEHIG 62
Query 105 RFVQENFLSPQVVERSLNKTDLSLAIGQWL-----ENPKNNTQVVELIQQTVPKIFEFVG 159
+ V + L+ + L +L I + E K T EL+ + E
Sbjct 63 KVVVSHLLTEDAIRARLLDENLQKEITDTITKMFHEKMKLETTPNELLHHFGYENAEIRS 122
Query 160 QEQIAQFIQNNSVQWVKSTKINTLASEMLRAVLENDFHQDV--LQRGLDLAHEWIVTHPE 217
I + ++ + STK T S+++ +LE++ + + + V E
Sbjct 123 MAWIEKTLE-KEINHFLSTKKTTKMSDLIPTMLESELTTKLPHVTERITSKMTLFVASEE 181
Query 218 ---QARELTATLFKELGVWKLAKGASWIGIDVQQRTIDSLIEKVESMLADPEHPWRQGIE 274
Q +++ F+E G K+ A IDS EK++ ++G++
Sbjct 182 GKIQIKQMLQKFFEEHG--KMGSMARMF------INIDSFSEKIQ----------QEGLK 223
Query 275 QYTQELMLKLSDSESEASLRLNTGKD--ALLDSPQVLNFISGAVVILCDAIKRDLLKSNS 332
QE L + + K+ L+ + + + L + + L N
Sbjct 224 LIGQEDTKNLINQLLTTEWKNFEAKELQELIPTEKQAHLAGQLTSELIQTLPHEKL-FNQ 282
Query 333 GIAENLRVAIQQVGHNLVQNMAVRHVLNERMTGLAITFSHQYSDK--IIRYISSRIHEWD 390
I LR G+ V ERM T S + ++ + + + ++I +
Sbjct 283 PIQVILR------GYEAAITEKVIPFAVERMLDFVATHSAEIVERMDLAKLVETQIATFS 336
Query 391 SSEMIGKIENEVGGDLHMIRVNGVVVGAFIGLILGII 427
E+ + G +L MI G ++G FIG+I GI+
Sbjct 337 LPEIEKLVVEISGRELKMITYLGGILGGFIGIIQGIL 373
>Q5WHV2 UPF0754 membrane protein ABC1518 [Shouchella clausii (strain
KSM-K16)]
Length=379
Score = 43.9 bits (102), Expect = 4e-08
Identities = 85/417 (20%), Positives = 160/417 (38%), Gaps = 71/417 (17%)
Query 45 WLIHILMLAAEAGVVGGLADWYAITVLFRNPFGKIPIPKFLLDHTE-IIPRNKARIAESM 103
W+ +L+LA +VG + AI +LFR P I K+ L T ++PR + +A +
Sbjct 3 WIWLVLLLAVVGAIVGAATNALAIRMLFR-PHRAYSIGKWQLPFTPGLLPRRQKELAVQL 61
Query 104 GRFVQENFLSPQVVERSLNKTDLSLAIGQWLENPKNNTQVVELI--QQTVPKIFEFVGQE 161
G V + L+ + + + T + + WL+ Q+ + ++TV I + + Q
Sbjct 62 GNIVANHLLTAEGLGKKFGSTAFAAELTNWLKK-----QLASWLRSERTVESILKPLFQA 116
Query 162 QIA-QFIQNNSVQWVKSTKINTLASEMLRAVLENDFHQDVLQRGLDLAHEWIVTHPEQAR 220
I + + S W+K L+ E V Q D +W+
Sbjct 117 DIGREHLVVQSKSWLKDR-----LKRYLQKNKEVPIKSVVPQELQDRLTDWL-------P 164
Query 221 ELTATLFKELGVW-KLAKGASWIGIDVQQ-RTIDSLIEKVESMLADPEHPWRQGI----- 273
E +A L K + +G IG V+Q T + + SM + +
Sbjct 165 EASALLLKRATAYIDSEEGEQRIGAMVRQFLTTKGKVGSMVSMFFSADKLTEYVLPEIKK 224
Query 274 ---EQYTQELMLKLSDSESE-------ASLRLNTGKDALLDSP--------QVLNFISGA 315
++ T+E + L +E AS + D +D VLN+ +
Sbjct 225 FLHDEQTKETVQSLLQTEWHRMLNRPLASFQAENYVDQFVDKAAEELEGKIPVLNWYNAP 284
Query 316 VVILCDAIKRDLLKSNSGIAENL-RVAIQQVGHNLVQNMAVRHVLNERMTGLAITFSHQY 374
+ L++ + + V ++Q +++ + + V+ E++ +FS +
Sbjct 285 LSTWTTPYAEPLVERGVPVIVGMVTVYMEQHIADILSKLRLEEVIEEQVA----SFSMAH 340
Query 375 SDKIIRYISSRIHEWDSSEMIGKIENEVGGDLHMIRVNGVVVGAFIGLILGIIRALF 431
+K+I I+ R +LHMI + G ++G +GLI +I F
Sbjct 341 LEKLIMNITRR-------------------ELHMITLLGGLIGGIVGLIQAVIVHFF 378
>B7GF17 UPF0754 membrane protein Aflv_2299 [Anoxybacillus flavithermus
(strain DSM 21510 / WK1)]
Length=369
Score = 43.1 bits (100), Expect = 7e-08
Identities = 39/166 (23%), Positives = 71/166 (43%), Gaps = 26/166 (16%)
Query 47 IHILMLAAEAGVVGGLADWYAITVLFRNPFGKIPIPKFLLDHTE-IIPRNKARIAESMGR 105
+++L + +GG+ + AI +LFR P+ I I L T +IP+ + +AE +GR
Sbjct 5 LYLLFMIVVGAFIGGMTNSLAIKMLFR-PYRPIYIAGKRLPFTPGLIPKRREELAEQLGR 63
Query 106 FVQENFLSPQVVERSLNKTD--------LSLAIGQWLENPKNNTQVVELIQQTVPKIFEF 157
V E+ L+ + + R LN + + +WL++ + Q ++ PK
Sbjct 64 MVVEHLLTAEGLRRKLNDPSFVQDMTSYVQEEVEKWLQSDRTVEQWLKQFGMPDPK---- 119
Query 158 VGQEQIAQFIQNNSVQWVKSTKINTLASEMLRAVLENDFHQDVLQR 203
+ W++ TK T S+ + L DVL +
Sbjct 120 -----------QTAETWIE-TKYKTFMSQYRQRPLHEIIPIDVLHK 153
Score = 18.9 bits (37), Expect = 3.1
Identities = 7/8 (88%), Positives = 8/8 (100%), Gaps = 0/8 (0%)
Query 414 VVVGAFIG 421
+VVGAFIG
Sbjct 11 IVVGAFIG 18
>A0AKX7 UPF0754 membrane protein lwe2241 [Listeria welshimeri
serovar 6b (strain ATCC 35897 / DSM 20650 / CIP 8149 / NCTC
11857 / SLCC 5334 / V8)]
Length=377
Score = 42.0 bits (97), Expect = 2e-07
Identities = 84/411 (20%), Positives = 158/411 (38%), Gaps = 70/411 (17%)
Query 46 LIHILMLAAEAGVVGGLADWYAITVLFRNPFGKIPIPKFLLDHTE-IIPRNKARIAESMG 104
L IL++A G +G + ++ AI +LFR P+ + + + T +IP+ + +AE +G
Sbjct 4 LFTILLMAVIGGFIGAMTNYIAIRMLFR-PYKALYLFNKRVPFTPGLIPKRRDELAEHIG 62
Query 105 RFVQENFLSPQVVERSLNKTDLSLAIGQWLENPKNNTQVVELIQQTVPKIFEFVGQEQIA 164
+ V + L+ + L + +L I + + + +E T ++ +G E
Sbjct 63 KVVVSHLLTEDAIRARLLEENLQKEITETVAKMFHEKMQLE---TTPNELLHQLGYEN-- 117
Query 165 QFIQNNSVQWV---------------KSTKINTLASEMLRAVLENDFHQDVLQRGLDLAH 209
+ S+ W+ K++++N L ML LE V +R
Sbjct 118 --AEGRSISWLETVLEKEINHFLTIKKTSQMNELIPVMLEKELETKL-PHVTERITSKLT 174
Query 210 EWIVTHPE--QARELTATLFKELGVWKLAKGASWIGIDVQQRTIDSLIEKVESMLADPEH 267
+I + Q + + F+E G K S + + + I++ + L + E
Sbjct 175 LFIASEEGKLQIKMMLQKFFEEHG-----KMGSMARMFINVESFSEKIQQEGAKLINQED 229
Query 268 -----------PWRQGIEQYTQELMLKLSDSESEASLRLNTGKDALLDSPQVLNFISGAV 316
W+ + QEL+ +E +A L + + P F
Sbjct 230 TKNLINQLLTTEWKNFEAKELQELI----PTEKQAHLAEQLTSEIIQAFPHDKIFNQPVQ 285
Query 317 VILCDAIKRDLLKSNSGIAENLRVAIQQVGHNLVQNMAVRHVLNERMTGLAITFSHQYSD 376
VIL D K E + + ++V+ M + ++ ++ TFS Q +
Sbjct 286 VILRDYEVMIKSKIIPFAVERMLDFVATHSADIVERMDLAKLVETQIA----TFSLQEIE 341
Query 377 KIIRYISSRIHEWDSSEMIGKIENEVGGDLHMIRVNGVVVGAFIGLILGII 427
K++ IS R +L MI G ++G FIG+I GI+
Sbjct 342 KLVVEISGR-------------------ELKMITYLGGILGGFIGVIQGIL 373
>C1KXH9 UPF0754 membrane protein Lm4b_02251 [Listeria monocytogenes
serotype 4b (strain CLIP80459)]
Length=377
Score = 41.6 bits (96), Expect = 2e-07
Identities = 80/403 (20%), Positives = 157/403 (39%), Gaps = 54/403 (13%)
Query 46 LIHILMLAAEAGVVGGLADWYAITVLFRNPFGKIPIPKFLLDHTE-IIPRNKARIAESMG 104
L IL++A G +G + ++ AI +LFR P+ I + L T +IP+ + +AE +G
Sbjct 4 LFTILLMAVIGGFIGAMTNYIAIRMLFR-PYKAIYLFNKRLPFTPGLIPKRRDELAEHIG 62
Query 105 RFVQENFLSPQVVERSLNKTDLSLAIGQWLENPKNNTQVVELIQQTVPKIFEFVGQEQIA 164
+ V + L+ + L +L I + + +E T ++ G E
Sbjct 63 KVVVSHLLTEDAIRARLLDENLQKEITDTITKMFHEKMQLE---TTPNELLHHFGYEN-- 117
Query 165 QFIQNNSVQWVK-----------STKINTLASEMLRAVLENDFHQDV--LQRGLDLAHEW 211
+ S+ WV+ +TK T S+++ +LE++ + + +
Sbjct 118 --AEIRSMTWVEKTLEKEINHFLTTKKTTKMSDLIPTMLESELTTKLPHVTERITSKMTL 175
Query 212 IVTHPE---QARELTATLFKELGVWKLAKGASWIGIDVQQRTIDSLIEKVESMLADPEHP 268
V+ E Q +++ F+E G K+ A IDS EK++
Sbjct 176 FVSSEEGKIQIKQMLQKFFEEHG--KMGSMARMF------INIDSFSEKIQ--------- 218
Query 269 WRQGIEQYTQELMLKLSDSESEASLRLNTGKD--ALLDSPQVLNFISGAVVILCDAIKRD 326
++G++ QE L + + K+ L+ + + + L +
Sbjct 219 -QEGLKLIGQEDTKNLINQLLTTEWKNFEAKELQELIPTEKQAHLAGQLTSELIQTFPHE 277
Query 327 LLKSNSGIAENLRVAIQQVGHNLVQNMAVRHVLNERMTGLAITFSHQYSDK--IIRYISS 384
L N + + G+ V ERM T S + ++ + + + +
Sbjct 278 KL-------FNQPIQVMLRGYEAAITEKVIPFAVERMLDFVATHSAEIVERMDLAKLVET 330
Query 385 RIHEWDSSEMIGKIENEVGGDLHMIRVNGVVVGAFIGLILGII 427
+I + E+ + G +L MI G ++G FIG+I G++
Sbjct 331 QIATFSLPEIEKLVVEISGRELKMITYLGGILGGFIGIIQGVL 373
>Q71XE1 UPF0754 membrane protein LMOf2365_2257 [Listeria monocytogenes
serotype 4b (strain F2365)]
Length=377
Score = 41.6 bits (96), Expect = 2e-07
Identities = 80/403 (20%), Positives = 157/403 (39%), Gaps = 54/403 (13%)
Query 46 LIHILMLAAEAGVVGGLADWYAITVLFRNPFGKIPIPKFLLDHTE-IIPRNKARIAESMG 104
L IL++A G +G + ++ AI +LFR P+ I + L T +IP+ + +AE +G
Sbjct 4 LFTILLMAVIGGFIGAMTNYIAIRMLFR-PYKAIYLFNKRLPFTPGLIPKRRDELAEHIG 62
Query 105 RFVQENFLSPQVVERSLNKTDLSLAIGQWLENPKNNTQVVELIQQTVPKIFEFVGQEQIA 164
+ V + L+ + L +L I + + +E T ++ G E
Sbjct 63 KVVVSHLLTEDAIRARLLDENLQKEITDTITKMFHEKMQLE---TTPNELLHHFGYEN-- 117
Query 165 QFIQNNSVQWVK-----------STKINTLASEMLRAVLENDFHQDV--LQRGLDLAHEW 211
+ S+ WV+ +TK T S+++ +LE++ + + +
Sbjct 118 --AEIRSMTWVEKTLEKEINHFLTTKKTTKMSDLIPTMLESELTTKLPHVTERITSKMTL 175
Query 212 IVTHPE---QARELTATLFKELGVWKLAKGASWIGIDVQQRTIDSLIEKVESMLADPEHP 268
V+ E Q +++ F+E G K+ A IDS EK++
Sbjct 176 FVSSEEGKIQIKQMLQKFFEEHG--KMGSMARMF------INIDSFSEKIQ--------- 218
Query 269 WRQGIEQYTQELMLKLSDSESEASLRLNTGKD--ALLDSPQVLNFISGAVVILCDAIKRD 326
++G++ QE L + + K+ L+ + + + L +
Sbjct 219 -QEGLKLIGQEDTKNLINQLLTTEWKNFEAKELQELIPTEKQAHLAGQLTSELIQTFPHE 277
Query 327 LLKSNSGIAENLRVAIQQVGHNLVQNMAVRHVLNERMTGLAITFSHQYSDK--IIRYISS 384
L N + + G+ V ERM T S + ++ + + + +
Sbjct 278 KL-------FNQPIQVMLRGYEAAITEKVIPFAVERMLDFVATHSAEIVERMDLAKLVET 330
Query 385 RIHEWDSSEMIGKIENEVGGDLHMIRVNGVVVGAFIGLILGII 427
+I + E+ + G +L MI G ++G FIG+I G++
Sbjct 331 QIATFSLPEIEKLVVEISGRELKMITYLGGILGGFIGIIQGVL 373
Lambda K H a alpha
0.323 0.137 0.401 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1420856
Database: 3581c7d54a366461faa8c54c3b0c8d88.SwissProt.fasta
Posted date: May 19, 2024 7:44 PM
Number of letters in database: 4,190
Number of sequences in database: 11
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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