BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: caacb2c57e49b07d87631c2bf68636d2.SwissProt.fasta
           1 sequences; 320 total letters



Query= ACIAD3536

Length=326
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

O13842 Putative polysaccharide deacetylase [Schizosaccharomyces p...  260     3e-90


>O13842 Putative polysaccharide deacetylase [Schizosaccharomyces 
pombe (strain 972 / ATCC 24843)]
Length=320

 Score = 260 bits (665),  Expect = 3e-90
 Identities = 135/318 (42%), Positives = 199/318 (63%), Gaps = 17/318 (5%)

Query  23   SRDLIGYHGQPPHAQ-WPNKAKIAVQFVLNYEEGGENHIEHGDAGSEQFLSD--IIGAAS  79
            +RDL G  G+P     WPN +KIAV FV+NYEEGGE  + + D G E FL++  ++   +
Sbjct  4    TRDLTGNAGKPVDTNPWPNNSKIAVSFVVNYEEGGERSLLYEDEGFETFLTEAGLMPFPN  63

Query  80   YPGRHMSMDSMYEYGARAGFWRIHQEFQKRGLPMTIFGVGMALARHPHIVEAIKNSPYDV  139
             P R  S++S +EYG+R GFWRI   F+K  +P T + +G A+ ++P +V A++ +  +V
Sbjct  64   RPVRERSIESCFEYGSRCGFWRILNLFKKHKVPFTCWAIGQAVEKNPVVVGAMEEAGCEV  123

Query  140  VSHGQRWIHYQDMDLETERMYMDQALSVLEALF--GETPIGWYTGRDSPNTRQLLAE---  194
             SH  RWI+Y+ +  ETE  ++ +++  ++        P  WYTGR S NTR+L+ +   
Sbjct  124  GSHSHRWINYEGVPPETEYEHIKKSVQAIQKASPSNSAPRSWYTGRASLNTRKLVCQVYK  183

Query  195  ---FPQIKYDCDYYGDDLPFWTT--LNQEDGTT--RPHLIIPYTLESNDMKFCSPGGFNS  247
                PQ  +D D Y DD P+W    L  + G    +  LI+PYTLE NDMK+    GF +
Sbjct  184  DLGLPQ-PFDSDEYNDDYPYWVADPLASKPGAEDDKGLLIVPYTLEVNDMKYAVAPGFCN  242

Query  248  GEQFFQYLKDAFDVLYAEG-ETAPKMLSIGMHCRILGRPGRFKALQRFLDYVQSHDRVWI  306
             + F+ Y +DAFDVLY EG E APKM++IG+HCR+ GRPGRF+ LQ+ ++++ S + VW+
Sbjct  243  SDDFYTYARDAFDVLYEEGLEGAPKMMTIGLHCRLTGRPGRFRGLQKLMEHITSKEGVWV  302

Query  307  CRRNDIAEHWYAHHPYQA  324
              R  IA+ W A HPY+A
Sbjct  303  ATREQIAQAWSAKHPYKA  320


 Score = 18.5 bits (36),  Expect = 0.22
 Identities = 7/22 (32%), Positives = 11/22 (50%), Gaps = 0/22 (0%)

Query  22   YSRDLIGYHGQPPHAQWPNKAK  43
            +S   I Y G PP  ++ +  K
Sbjct  126  HSHRWINYEGVPPETEYEHIKK  147



Lambda      K        H        a         alpha
   0.323    0.140    0.453    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 87016


  Database: caacb2c57e49b07d87631c2bf68636d2.SwissProt.fasta
    Posted date:  May 20, 2024  1:00 PM
  Number of letters in database: 320
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40