BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: fae281476154838f2d8f13cb5b0c912b.SwissProt.fasta
           1 sequences; 312 total letters



Query= ACIAD3482

Length=266
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

O62515 Probable phytanoyl-CoA dioxygenase [Caenorhabditis elegans]    50.8    6e-12


>O62515 Probable phytanoyl-CoA dioxygenase [Caenorhabditis elegans]
Length=312

 Score = 50.8 bits (120),  Expect = 6e-12
 Identities = 45/177 (25%), Positives = 77/177 (44%), Gaps = 15/177 (8%)

Query  69   YEFVYQSPAGQIAKSLMQSRDVRLFHEHVLV--KSPNSSKVT---PWHHDAPYYPVNAKQ  123
            +E+        + K L+ +    L   H ++  K P++ K+T   P H D  Y+P     
Sbjct  95   FEYCKYPGVVDVVKDLIGNPKSNLMAMHTMLINKPPDNGKLTSRHPMHQDLQYFPFRPAD  154

Query  124  TLSL-WIPLDPISRESS-IEFVAGSHRWNKHFKAQSFNGQYYEHSGMQEESLPDIDGHRE  181
             +   W  ++ I+R +  +  V G+H      K      +Y +  G   ++   I  +  
Sbjct  155  FICCAWTAMEKITRANGCLVVVPGTH------KGVLLPHEYPKWEGGVNKAYHGIQDYDT  208

Query  182  QYNILGWELEPGDAIAFDYLTIHGAPGNLSSEYARRAVSFRWLGDDAI-YVNRGGKT  237
                +  E+EPGD + F  + IHG+  N  +E  R+A+S  +  DD   YVN  G T
Sbjct  209  STPRIHVEMEPGDTVFFHPILIHGSGAN-RTEGFRKAISCHYANDDLCRYVNVEGTT  264


 Score = 13.1 bits (22),  Expect = 8.6
 Identities = 3/13 (23%), Positives = 8/13 (62%), Gaps = 0/13 (0%)

Query  242  PHLNTILKTGDAL  254
            P ++  ++ GD +
Sbjct  211  PRIHVEMEPGDTV  223



Lambda      K        H        a         alpha
   0.321    0.138    0.447    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 68640


  Database: fae281476154838f2d8f13cb5b0c912b.SwissProt.fasta
    Posted date:  May 20, 2024  2:20 AM
  Number of letters in database: 312
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40