BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: fefd245f56c669a95316789785ff3df3.SwissProt.fasta
25 sequences; 10,140 total letters
Query= ACIAD3424
Length=433
Score E
Sequences producing significant alignments: (Bits) Value
A4WCC0 Multidrug resistance protein MdtA [Enterobacter sp. (strai... 320 3e-109
F2EYD8 Multidrug resistance protein MdtA [Pantoea ananatis (strai... 319 5e-109
C9XVZ5 Multidrug resistance protein MdtA [Cronobacter turicensis ... 318 2e-108
B2TYA9 Multidrug resistance protein MdtA [Shigella boydii serotyp... 308 2e-104
B5YUD2 Multidrug resistance protein MdtA [Escherichia coli O157:H... 308 2e-104
Q8X7J5 Multidrug resistance protein MdtA [Escherichia coli O157:H7] 308 2e-104
A7ZNP7 Multidrug resistance protein MdtA [Escherichia coli O139:H... 307 3e-104
B7ME86 Multidrug resistance protein MdtA [Escherichia coli O45:K1... 307 3e-104
B7MWY7 Multidrug resistance protein MdtA [Escherichia coli O81 (s... 307 3e-104
B7LV38 Multidrug resistance protein MdtA [Escherichia fergusonii ... 307 4e-104
Q0TG16 Multidrug resistance protein MdtA [Escherichia coli O6:K15... 307 4e-104
B7M457 Multidrug resistance protein MdtA [Escherichia coli O8 (st... 307 4e-104
A6TBH3 Multidrug resistance protein MdtA [Klebsiella pneumoniae s... 306 5e-104
B7NQB2 Multidrug resistance protein MdtA [Escherichia coli O7:K1 ... 306 7e-104
P76397 Multidrug resistance protein MdtA [Escherichia coli (strai... 305 1e-103
D4I6V2 Multidrug resistance protein MdtA [Erwinia amylovora (stra... 288 6e-97
P0AE06 Multidrug efflux pump subunit AcrA [Escherichia coli (stra... 149 1e-43
Q8FWV8 Efflux pump periplasmic linker BepF [Brucella suis biovar ... 140 1e-40
P43505 Membrane fusion protein MtrC [Neisseria gonorrhoeae] 139 4e-40
P52477 Multidrug resistance protein MexA [Pseudomonas aeruginosa ... 130 4e-37
P24180 Multidrug export protein AcrE [Escherichia coli (strain K12)] 130 4e-37
Q88N30 Probable efflux pump periplasmic linker TtgA [Pseudomonas ... 126 2e-35
P0C069 Multidrug/solvent efflux pump periplasmic linker protein M... 126 2e-35
Q9WWZ9 Toluene efflux pump periplasmic linker protein TtgA [Pseud... 125 3e-35
O31099 Solvent efflux pump periplasmic linker SrpA [Pseudomonas p... 125 5e-35
>A4WCC0 Multidrug resistance protein MdtA [Enterobacter sp. (strain
638)]
Length=411
Score = 320 bits (819), Expect = 3e-109
Identities = 170/364 (47%), Positives = 237/364 (65%), Gaps = 10/364 (3%)
Query 41 THQPIASARSGAHGKGGQKAGLGLNGAPIAVGVSKVVQQDVQQTIQALGTVTSSNTVVVH 100
T Q A G HG G G+ V + V + V + + LGTVT++NTV V
Sbjct 36 TTQQQRPAGGGRHGMRG--------GSLAPVQAATAVSKSVPRYLTGLGTVTAANTVTVR 87
Query 101 PLINGTLMQIYFKEGGLVHKGQLLALIDDRAPKAALLQAQGQLLKDQALLTNAQLDLQRY 160
++G LM I+F+EG V G LLA ID K AL QAQGQL KD+A L NA+ DL RY
Sbjct 88 SRVDGQLMAIHFQEGQQVKAGDLLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLARY 147
Query 161 AQLWQQDSIAKQQYDTQASLVKQYQGVLKTDQAAVDNAKLQLSYTRVVSPVDGRIGLRQI 220
QL + + +++Q+ DTQ SLV + QG +KTD+AAV +A+LQL ++R+ +P+DGR+GL+Q+
Sbjct 148 QQLVKTNLVSRQELDTQQSLVSEAQGTIKTDEAAVASAQLQLDWSRITAPIDGRVGLKQV 207
Query 221 DVGNMVNSSDTNGIANITQLKNISVVFAVPEQYLTQLMQITDHPDQPIEVAAWDRQNTQK 280
D+GN ++S DT GI ITQ I +VF +PE + ++Q QP+ V AWDR N K
Sbjct 208 DIGNQISSGDTTGIVVITQTHPIDLVFTLPENEIATVVQ-AQKTGQPLAVEAWDRTNKAK 266
Query 281 LADGKLVALDNQVNVTTGTINIKASFDNHNQHLFPNQFVNVRMSLGNIPNALIVPTVALQ 340
L+DG L++LDNQ++ TTGTI +KA F+N + LFPNQFVN RM + NA+++PT ALQ
Sbjct 267 LSDGTLLSLDNQIDATTGTIKVKARFNNQDDALFPNQFVNARMLVATEENAVVIPTAALQ 326
Query 341 LGAHGSFVYKVNSDQKVSAVNVQTGTVVEDNTVITGGALNANDTVVTDGVDKLKDGAKIT 400
+G G+FV+ +NSD KVS V+ G + + TV+ L+A D VVTDG+D+L +GAK+
Sbjct 327 MGNEGNFVWVLNSDNKVSKHLVKPG-IQDSQTVVISAGLSAGDRVVTDGIDRLTEGAKVE 385
Query 401 LASA 404
+ A
Sbjct 386 VVDA 389
>F2EYD8 Multidrug resistance protein MdtA [Pantoea ananatis (strain
AJ13355)]
Length=410
Score = 319 bits (818), Expect = 5e-109
Identities = 174/399 (44%), Positives = 253/399 (63%), Gaps = 17/399 (4%)
Query 24 IILFIILFLVGWGIWFLTH--QPIAS---ARSGAHGKGGQKAGLGLNGA--PIA-VGVSK 75
+I+ +++ + G ++ H QP + + AHGK G NGA P+A V +
Sbjct 12 LIVLVVIAVAAGGYYWWKHPAQPSSDGDLSGQSAHGKRG-------NGAHKPLAPVQAAS 64
Query 76 VVQQDVQQTIQALGTVTSSNTVVVHPLINGTLMQIYFKEGGLVHKGQLLALIDDRAPKAA 135
V + V Q + LGTVT++NTV V ++G LM I+F EG V GQLLA ID R + A
Sbjct 65 AVTESVPQYLNGLGTVTAANTVTVRSRVDGNLMSIHFTEGQQVKAGQLLAEIDPRPYQVA 124
Query 136 LLQAQGQLLKDQALLTNAQLDLQRYAQLWQQDSIAKQQYDTQASLVKQYQGVLKTDQAAV 195
L+QAQGQL +DQA L NA+ DL RY +L + +++Q DTQ +LV + G +K D+ +V
Sbjct 125 LMQAQGQLARDQATLANARRDLARYQKLAKTSLVSQQDLDTQNALVSETLGTIKADEGSV 184
Query 196 DNAKLQLSYTRVVSPVDGRIGLRQIDVGNMVNSSDTNGIANITQLKNISVVFAVPEQYLT 255
+A+L L+Y+R+ SP+DGR+GL+Q+D+GN + S DTNG+ ITQ + VVF+V E ++
Sbjct 185 ASAQLNLTYSRITSPIDGRVGLKQVDIGNYITSGDTNGLVVITQTHPVDVVFSVAENNIS 244
Query 256 QLMQITDHPDQPIEVAAWDRQNTQKLADGKLVALDNQVNVTTGTINIKASFDNHNQHLFP 315
Q+MQ +P+ V AWDR N + GKL++LDNQ++ TTGTI IKA FDN + LFP
Sbjct 245 QIMQ-AQKSGEPLLVEAWDRSNQHLITRGKLLSLDNQIDATTGTIKIKARFDNQDDLLFP 303
Query 316 NQFVNVRMSLGNIPNALIVPTVALQLGAHGSFVYKVNSDQKVSAVNVQTGTVVEDNTVIT 375
NQFVN R+ + + +A+++P ALQ+G G FV+ +N++ KVS +V G VI+
Sbjct 304 NQFVNARLKVNTLQDAVVIPAAALQMGNEGHFVWVINNEDKVSKKSVTAGLQDSQKVVIS 363
Query 376 GGALNANDTVVTDGVDKLKDGAKITLASAAHHGLGQHRA 414
G LNA D VVTDG+D+L +GAK+ + +A + RA
Sbjct 364 AG-LNAGDRVVTDGLDRLTEGAKVEVVAAQSRATKETRA 401
>C9XVZ5 Multidrug resistance protein MdtA [Cronobacter turicensis
(strain DSM 18703 / CCUG 55852 / LMG 23827 / z3032)]
Length=415
Score = 318 bits (814), Expect = 2e-108
Identities = 169/390 (43%), Positives = 246/390 (63%), Gaps = 8/390 (2%)
Query 15 RKKKVFVSYIILFIILFLVGWGIWFLTHQPIASARSGAHGKGGQKAGLGLNGAPIAVGVS 74
+K+ ++ I++ + L+ W A SG G +A + + AP V +
Sbjct 6 KKRGWVIAGIVVVALAALLYW------RYAATEAPSGKAQHAGGRAAMRMGSAPAPVQAA 59
Query 75 KVVQQDVQQTIQALGTVTSSNTVVVHPLINGTLMQIYFKEGGLVHKGQLLALIDDRAPKA 134
+ V + + LGT+T++NTV V ++G LM I+FKEG V G LLA ID K
Sbjct 60 TARSEAVPRYLTGLGTITAANTVTVRSRVDGQLMAIHFKEGQQVKAGDLLAEIDPSQFKV 119
Query 135 ALLQAQGQLLKDQALLTNAQLDLQRYAQLWQQDSIAKQQYDTQASLVKQYQGVLKTDQAA 194
AL QAQGQL KD+A L NA+ DL RY QL + + +++Q+ D Q +LV + +G LK D+AA
Sbjct 120 ALAQAQGQLAKDRATLANARRDLARYQQLGKTNLVSRQELDAQQALVSESEGTLKADEAA 179
Query 195 VDNAKLQLSYTRVVSPVDGRIGLRQIDVGNMVNSSDTNGIANITQLKNISVVFAVPEQYL 254
V +A+LQL ++R+ +P+DGR+GL+Q+D+GN ++S DT GI +TQ I +VF +PE +
Sbjct 180 VASAQLQLDWSRITAPIDGRVGLKQVDIGNQISSGDTTGIVVLTQTHPIDLVFTLPESDI 239
Query 255 TQLMQITDHPDQPIEVAAWDRQNTQKLADGKLVALDNQVNVTTGTINIKASFDNHNQHLF 314
+MQ +P+ V AWDR N+ KL+ G+L++LDNQ++ TTGTI +KA F N + LF
Sbjct 240 AAVMQ-AQKAGKPLTVEAWDRTNSTKLSTGELLSLDNQIDATTGTIKLKARFANEDDALF 298
Query 315 PNQFVNVRMSLGNIPNALIVPTVALQLGAHGSFVYKVNSDQKVSAVNVQTGTVVEDNTVI 374
PNQFVN RM + NA+++PT ALQ+G G FV+ +N D KVS V TG ++ VI
Sbjct 299 PNQFVNARMLIDTQQNAVVIPTAALQMGNEGHFVWVLNDDNKVSKHTVTTGIQNSESVVI 358
Query 375 TGGALNANDTVVTDGVDKLKDGAKITLASA 404
T G L+A D VVTDG+D+L +GAK+ + A
Sbjct 359 TAG-LSAGDRVVTDGIDRLTEGAKVDVVEA 387
>B2TYA9 Multidrug resistance protein MdtA [Shigella boydii serotype
18 (strain CDC 3083-94 / BS512)]
Length=415
Score = 308 bits (788), Expect = 2e-104
Identities = 165/390 (42%), Positives = 250/390 (64%), Gaps = 13/390 (3%)
Query 23 YIILFIILFLVGWGIWFLTHQ-------PIASARSGAHGKGGQKAGLGLNGAPIA-VGVS 74
++I+ +++ WF + P A+ ++ GG++ G+ P+A V +
Sbjct 9 WVIVIVVVIAAIAAFWFWQGRNDSQSAAPGATKQAQQSPAGGRR---GMRSGPLAPVQAA 65
Query 75 KVVQQDVQQTIQALGTVTSSNTVVVHPLINGTLMQIYFKEGGLVHKGQLLALIDDRAPKA 134
V+Q V + + LGT+T++NTV V ++G LM ++F+EG V G LLA ID K
Sbjct 66 TAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPSQFKV 125
Query 135 ALLQAQGQLLKDQALLTNAQLDLQRYAQLWQQDSIAKQQYDTQASLVKQYQGVLKTDQAA 194
AL QAQGQL KD+A LTNA+ DL RY QL + + +++Q+ D Q +LV + +G +K D+A+
Sbjct 126 ALAQAQGQLAKDKATLTNARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKADEAS 185
Query 195 VDNAKLQLSYTRVVSPVDGRIGLRQIDVGNMVNSSDTNGIANITQLKNISVVFAVPEQYL 254
V +A+LQL ++R+ +PVDGR+GL+Q+DVGN ++S DT GI ITQ I ++F +PE +
Sbjct 186 VASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHPIDLLFTLPESDI 245
Query 255 TQLMQITDHPDQPIEVAAWDRQNTQKLADGKLVALDNQVNVTTGTINIKASFDNHNQHLF 314
++Q +P+ V AWDR N++KL++G L++LDNQ++ TTGTI +KA F+N + LF
Sbjct 246 ATVVQ-AQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVKARFNNQDDALF 304
Query 315 PNQFVNVRMSLGNIPNALIVPTVALQLGAHGSFVYKVNSDQKVSAVNVQTGTVVEDNTVI 374
PNQFVN RM + NA+++PT ALQ+G G FV+ +NS+ KVS V G VI
Sbjct 305 PNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVTPGIQDSQKVVI 364
Query 375 TGGALNANDTVVTDGVDKLKDGAKITLASA 404
G ++A D VVTDG+D+L +GAK+ + A
Sbjct 365 RAG-ISAGDRVVTDGIDRLTEGAKVEVVEA 393
>B5YUD2 Multidrug resistance protein MdtA [Escherichia coli O157:H7
(strain EC4115 / EHEC)]
Length=415
Score = 308 bits (788), Expect = 2e-104
Identities = 165/390 (42%), Positives = 250/390 (64%), Gaps = 13/390 (3%)
Query 23 YIILFIILFLVGWGIWFLTHQ-------PIASARSGAHGKGGQKAGLGLNGAPIA-VGVS 74
++I+ +++ WF + P A+ ++ GG++ G+ P+A V +
Sbjct 9 WVIVIVVVIAAIAAFWFWQGRNDSQSAAPGATKQAQQSPAGGRR---GMRSGPLAPVQAA 65
Query 75 KVVQQDVQQTIQALGTVTSSNTVVVHPLINGTLMQIYFKEGGLVHKGQLLALIDDRAPKA 134
V+Q V + + LGT+T++NTV V ++G LM ++F+EG V G LLA ID K
Sbjct 66 TAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPSQFKV 125
Query 135 ALLQAQGQLLKDQALLTNAQLDLQRYAQLWQQDSIAKQQYDTQASLVKQYQGVLKTDQAA 194
AL QAQGQL KD+A LTNA+ DL RY QL + + +++Q+ D Q +LV + +G +K D+A+
Sbjct 126 ALAQAQGQLAKDKATLTNARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKADEAS 185
Query 195 VDNAKLQLSYTRVVSPVDGRIGLRQIDVGNMVNSSDTNGIANITQLKNISVVFAVPEQYL 254
V +A+LQL ++R+ +PVDGR+GL+Q+DVGN ++S DT GI ITQ I ++F +PE +
Sbjct 186 VASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHPIDLLFTLPESDI 245
Query 255 TQLMQITDHPDQPIEVAAWDRQNTQKLADGKLVALDNQVNVTTGTINIKASFDNHNQHLF 314
++Q +P+ V AWDR N++KL++G L++LDNQ++ TTGTI +KA F+N + LF
Sbjct 246 ATVVQ-AQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVKARFNNQDDALF 304
Query 315 PNQFVNVRMSLGNIPNALIVPTVALQLGAHGSFVYKVNSDQKVSAVNVQTGTVVEDNTVI 374
PNQFVN RM + NA+++PT ALQ+G G FV+ +NS+ KVS V G VI
Sbjct 305 PNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVTPGIQDSQKVVI 364
Query 375 TGGALNANDTVVTDGVDKLKDGAKITLASA 404
G ++A D VVTDG+D+L +GAK+ + A
Sbjct 365 RAG-ISAGDRVVTDGIDRLTEGAKVEVVEA 393
>Q8X7J5 Multidrug resistance protein MdtA [Escherichia coli O157:H7]
Length=415
Score = 308 bits (788), Expect = 2e-104
Identities = 165/390 (42%), Positives = 250/390 (64%), Gaps = 13/390 (3%)
Query 23 YIILFIILFLVGWGIWFLTHQ-------PIASARSGAHGKGGQKAGLGLNGAPIA-VGVS 74
++I+ +++ WF + P A+ ++ GG++ G+ P+A V +
Sbjct 9 WVIVIVVVIAAIAAFWFWQGRNDSQSAAPGATKQAQQSPAGGRR---GMRSGPLAPVQAA 65
Query 75 KVVQQDVQQTIQALGTVTSSNTVVVHPLINGTLMQIYFKEGGLVHKGQLLALIDDRAPKA 134
V+Q V + + LGT+T++NTV V ++G LM ++F+EG V G LLA ID K
Sbjct 66 TAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPSQFKV 125
Query 135 ALLQAQGQLLKDQALLTNAQLDLQRYAQLWQQDSIAKQQYDTQASLVKQYQGVLKTDQAA 194
AL QAQGQL KD+A LTNA+ DL RY QL + + +++Q+ D Q +LV + +G +K D+A+
Sbjct 126 ALAQAQGQLAKDKATLTNARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKADEAS 185
Query 195 VDNAKLQLSYTRVVSPVDGRIGLRQIDVGNMVNSSDTNGIANITQLKNISVVFAVPEQYL 254
V +A+LQL ++R+ +PVDGR+GL+Q+DVGN ++S DT GI ITQ I ++F +PE +
Sbjct 186 VASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHPIDLLFTLPESDI 245
Query 255 TQLMQITDHPDQPIEVAAWDRQNTQKLADGKLVALDNQVNVTTGTINIKASFDNHNQHLF 314
++Q +P+ V AWDR N++KL++G L++LDNQ++ TTGTI +KA F+N + LF
Sbjct 246 ATVVQ-AQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVKARFNNQDDALF 304
Query 315 PNQFVNVRMSLGNIPNALIVPTVALQLGAHGSFVYKVNSDQKVSAVNVQTGTVVEDNTVI 374
PNQFVN RM + NA+++PT ALQ+G G FV+ +NS+ KVS V G VI
Sbjct 305 PNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVTPGIQDSQKVVI 364
Query 375 TGGALNANDTVVTDGVDKLKDGAKITLASA 404
G ++A D VVTDG+D+L +GAK+ + A
Sbjct 365 RAG-ISAGDRVVTDGIDRLTEGAKVEVVEA 393
>A7ZNP7 Multidrug resistance protein MdtA [Escherichia coli O139:H28
(strain E24377A / ETEC)]
Length=415
Score = 307 bits (787), Expect = 3e-104
Identities = 166/400 (42%), Positives = 252/400 (63%), Gaps = 13/400 (3%)
Query 23 YIILFIILFLVGWGIWFLTHQ-------PIASARSGAHGKGGQKAGLGLNGAPIA-VGVS 74
++I+ +++ WF + P A+ ++ GG++ G+ P+A V +
Sbjct 9 WVIVIVVVIAAIAAFWFWQGRNDSQSAAPGATKQAQQSPAGGRR---GMRSGPLAPVQAA 65
Query 75 KVVQQDVQQTIQALGTVTSSNTVVVHPLINGTLMQIYFKEGGLVHKGQLLALIDDRAPKA 134
V+Q V + + LGT+T++NTV V ++G LM ++F+EG V G LLA ID K
Sbjct 66 TAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPSQFKV 125
Query 135 ALLQAQGQLLKDQALLTNAQLDLQRYAQLWQQDSIAKQQYDTQASLVKQYQGVLKTDQAA 194
AL QAQGQL KD+A L NA+ DL RY QL + + +++Q+ D Q +LV + +G +K D+A+
Sbjct 126 ALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKADEAS 185
Query 195 VDNAKLQLSYTRVVSPVDGRIGLRQIDVGNMVNSSDTNGIANITQLKNISVVFAVPEQYL 254
V +A+LQL ++R+ +PVDGR+GL+Q+DVGN ++S DT GI ITQ I +VF +PE +
Sbjct 186 VASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHPIDLVFTLPESDI 245
Query 255 TQLMQITDHPDQPIEVAAWDRQNTQKLADGKLVALDNQVNVTTGTINIKASFDNHNQHLF 314
++Q +P+ V AWDR N++KL++G L++LDNQ++ TTGTI +KA F+N + LF
Sbjct 246 ATVVQ-AQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVKARFNNQDDALF 304
Query 315 PNQFVNVRMSLGNIPNALIVPTVALQLGAHGSFVYKVNSDQKVSAVNVQTGTVVEDNTVI 374
PNQFVN RM + NA+++PT ALQ+G G FV+ +NS+ KVS V G VI
Sbjct 305 PNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVTPGIQDSQKVVI 364
Query 375 TGGALNANDTVVTDGVDKLKDGAKITLASAAHHGLGQHRA 414
G ++A D VVTDG+D+L +GAK+ + A + +A
Sbjct 365 RAG-ISAGDRVVTDGIDRLTEGAKVEVVEAQSTTTSEEKA 403
>B7ME86 Multidrug resistance protein MdtA [Escherichia coli O45:K1
(strain S88 / ExPEC)]
Length=415
Score = 307 bits (787), Expect = 3e-104
Identities = 165/390 (42%), Positives = 249/390 (64%), Gaps = 13/390 (3%)
Query 23 YIILFIILFLVGWGIWFLTHQ-------PIASARSGAHGKGGQKAGLGLNGAPIA-VGVS 74
++I+ +++ WF + P A+ ++ GG++ G+ P+A V +
Sbjct 9 WVIVIVVVIAAIAAFWFWQGRNDSQSAAPGATKQAQQSPAGGRR---GMRAGPLAPVQAA 65
Query 75 KVVQQDVQQTIQALGTVTSSNTVVVHPLINGTLMQIYFKEGGLVHKGQLLALIDDRAPKA 134
V+Q V + + LGT+T++NTV V ++G LM ++F+EG V G LLA ID K
Sbjct 66 TAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPSQFKV 125
Query 135 ALLQAQGQLLKDQALLTNAQLDLQRYAQLWQQDSIAKQQYDTQASLVKQYQGVLKTDQAA 194
AL QAQGQL KD+A L NA+ DL RY QL + + +++Q+ D Q +LV + +G +K D+A+
Sbjct 126 ALAQAQGQLAKDKATLANARRDLSRYQQLAKTNLVSRQELDAQQALVSETEGTIKADEAS 185
Query 195 VDNAKLQLSYTRVVSPVDGRIGLRQIDVGNMVNSSDTNGIANITQLKNISVVFAVPEQYL 254
V +A+LQL ++R+ +PVDGR+GL+Q+DVGN ++S DT GI ITQ I +VF +PE +
Sbjct 186 VASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHPIDLVFTLPESDI 245
Query 255 TQLMQITDHPDQPIEVAAWDRQNTQKLADGKLVALDNQVNVTTGTINIKASFDNHNQHLF 314
++Q +P+ V AWDR N++KL++G L++LDNQ++ TTGTI +KA F+N + LF
Sbjct 246 ATVVQ-AQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVKARFNNQDDALF 304
Query 315 PNQFVNVRMSLGNIPNALIVPTVALQLGAHGSFVYKVNSDQKVSAVNVQTGTVVEDNTVI 374
PNQFVN RM + NA+++PT ALQ+G G FV+ +NS+ KVS V G VI
Sbjct 305 PNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVTPGIQDSQKVVI 364
Query 375 TGGALNANDTVVTDGVDKLKDGAKITLASA 404
G ++A D VVTDG+D+L +GAK+ + A
Sbjct 365 RAG-ISAGDRVVTDGIDRLTEGAKVEVVEA 393
>B7MWY7 Multidrug resistance protein MdtA [Escherichia coli O81
(strain ED1a)]
Length=415
Score = 307 bits (787), Expect = 3e-104
Identities = 167/387 (43%), Positives = 245/387 (63%), Gaps = 7/387 (2%)
Query 23 YIILFIILFLVGWGIWFLT-HQPIASARSGAHGKGGQKAGLGLNG---APIA-VGVSKVV 77
++I+ +++ WF SA GA + Q G G P+A V + V
Sbjct 9 WVIVIVVVIAAIAAFWFWQGRNDSRSAAPGATKQAQQSPASGRRGMRSGPLAPVQAATAV 68
Query 78 QQDVQQTIQALGTVTSSNTVVVHPLINGTLMQIYFKEGGLVHKGQLLALIDDRAPKAALL 137
+Q V + + LGT+T++NTV V ++G LM ++F+EG V G LLA ID K AL
Sbjct 69 EQAVPRYLTGLGTITAANTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPSQFKVALA 128
Query 138 QAQGQLLKDQALLTNAQLDLQRYAQLWQQDSIAKQQYDTQASLVKQYQGVLKTDQAAVDN 197
QAQGQL KD+A L NA+ DL RY QL + + +++Q+ D Q +LV + +G +K D+A+V +
Sbjct 129 QAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKADEASVAS 188
Query 198 AKLQLSYTRVVSPVDGRIGLRQIDVGNMVNSSDTNGIANITQLKNISVVFAVPEQYLTQL 257
A+LQL ++R+ +PVDGR+GL+Q+DVGN ++S DT GI ITQ I +VF +PE + +
Sbjct 189 AQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHPIDLVFTLPESDIATV 248
Query 258 MQITDHPDQPIEVAAWDRQNTQKLADGKLVALDNQVNVTTGTINIKASFDNHNQHLFPNQ 317
+Q +P+ V AWDR N++KL++G L++LDNQ++ TTGTI +KA F+N + LFPNQ
Sbjct 249 VQ-AQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVKARFNNQDDALFPNQ 307
Query 318 FVNVRMSLGNIPNALIVPTVALQLGAHGSFVYKVNSDQKVSAVNVQTGTVVEDNTVITGG 377
FVN RM + NA+++PT ALQ+G G FV+ +NS+ KVS V G VI G
Sbjct 308 FVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVTPGIQDSQKVVIRAG 367
Query 378 ALNANDTVVTDGVDKLKDGAKITLASA 404
++A D VVTDG+D+L +GAK+ + A
Sbjct 368 -ISAGDRVVTDGIDRLTEGAKVEVVEA 393
>B7LV38 Multidrug resistance protein MdtA [Escherichia fergusonii
(strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443
/ JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)]
Length=415
Score = 307 bits (786), Expect = 4e-104
Identities = 165/390 (42%), Positives = 249/390 (64%), Gaps = 13/390 (3%)
Query 23 YIILFIILFLVGWGIWFLTHQ-------PIASARSGAHGKGGQKAGLGLNGAPIA-VGVS 74
++I+ +++ WF + P A+ ++ GG++ G+ P+A V +
Sbjct 9 WVIVIVVVIAAIAAFWFWQGRNESQSAAPGATKQAQQSPAGGRR---GMRSGPLAPVQAA 65
Query 75 KVVQQDVQQTIQALGTVTSSNTVVVHPLINGTLMQIYFKEGGLVHKGQLLALIDDRAPKA 134
V+Q V + + LGT+T++NTV V ++G LM ++F+EG V G LLA ID K
Sbjct 66 TAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPSQFKV 125
Query 135 ALLQAQGQLLKDQALLTNAQLDLQRYAQLWQQDSIAKQQYDTQASLVKQYQGVLKTDQAA 194
AL QAQGQL KD+A L NA+ DL RY QL + + +++Q+ D Q +LV + +G K D+A+
Sbjct 126 ALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTFKADEAS 185
Query 195 VDNAKLQLSYTRVVSPVDGRIGLRQIDVGNMVNSSDTNGIANITQLKNISVVFAVPEQYL 254
V +A+LQL ++R+ +PVDGR+GL+Q+DVGN ++S DT GI ITQ I ++F +PE +
Sbjct 186 VASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHPIDLLFTLPESDI 245
Query 255 TQLMQITDHPDQPIEVAAWDRQNTQKLADGKLVALDNQVNVTTGTINIKASFDNHNQHLF 314
T ++Q +P+ V AWDR N++KL++G L++LDNQ++ TTGTI +KA F+N + LF
Sbjct 246 TTVVQ-AQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVKARFNNQDDALF 304
Query 315 PNQFVNVRMSLGNIPNALIVPTVALQLGAHGSFVYKVNSDQKVSAVNVQTGTVVEDNTVI 374
PNQFVN RM + NA+++PT ALQ+G G FV+ +NS+ KVS V G VI
Sbjct 305 PNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVTPGIQDSQKVVI 364
Query 375 TGGALNANDTVVTDGVDKLKDGAKITLASA 404
G ++A D VVTDG+D+L +GAK+ + A
Sbjct 365 RAG-ISAGDRVVTDGIDRLTEGAKVEVVEA 393
>Q0TG16 Multidrug resistance protein MdtA [Escherichia coli O6:K15:H31
(strain 536 / UPEC)]
Length=415
Score = 307 bits (786), Expect = 4e-104
Identities = 165/390 (42%), Positives = 249/390 (64%), Gaps = 13/390 (3%)
Query 23 YIILFIILFLVGWGIWFLTHQ-------PIASARSGAHGKGGQKAGLGLNGAPIA-VGVS 74
++I+ +++ WF + P A+ ++ GG++ G+ P+A V +
Sbjct 9 WVIVIVVVIAAIAAFWFWQGRNDSQSAAPGATKQAQQSPAGGRR---GMRAGPLAPVQAA 65
Query 75 KVVQQDVQQTIQALGTVTSSNTVVVHPLINGTLMQIYFKEGGLVHKGQLLALIDDRAPKA 134
V+Q V + + LGT+T++NTV V ++G LM ++F+EG V G LLA ID K
Sbjct 66 TAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPSQFKV 125
Query 135 ALLQAQGQLLKDQALLTNAQLDLQRYAQLWQQDSIAKQQYDTQASLVKQYQGVLKTDQAA 194
AL QAQGQL KD+A L NA+ DL RY QL + + +++Q+ D Q +LV + +G +K D+A+
Sbjct 126 ALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKADEAS 185
Query 195 VDNAKLQLSYTRVVSPVDGRIGLRQIDVGNMVNSSDTNGIANITQLKNISVVFAVPEQYL 254
V +A+LQL ++R+ +PVDGR+GL+Q+DVGN ++S DT GI ITQ I +VF +PE +
Sbjct 186 VASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHPIDLVFTLPESDI 245
Query 255 TQLMQITDHPDQPIEVAAWDRQNTQKLADGKLVALDNQVNVTTGTINIKASFDNHNQHLF 314
++Q +P+ V AWDR N++KL++G L++LDNQ++ TTGTI +KA F+N + LF
Sbjct 246 ATVVQ-AQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVKARFNNQDDALF 304
Query 315 PNQFVNVRMSLGNIPNALIVPTVALQLGAHGSFVYKVNSDQKVSAVNVQTGTVVEDNTVI 374
PNQFVN RM + NA+++PT ALQ+G G FV+ +NS+ KVS V G VI
Sbjct 305 PNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVTPGIQDSQKVVI 364
Query 375 TGGALNANDTVVTDGVDKLKDGAKITLASA 404
G ++A D VVTDG+D+L +GAK+ + A
Sbjct 365 RAG-ISAGDRVVTDGIDRLTEGAKVEVVEA 393
>B7M457 Multidrug resistance protein MdtA [Escherichia coli O8
(strain IAI1)]
Length=415
Score = 307 bits (786), Expect = 4e-104
Identities = 165/390 (42%), Positives = 249/390 (64%), Gaps = 13/390 (3%)
Query 23 YIILFIILFLVGWGIWFLTHQ-------PIASARSGAHGKGGQKAGLGLNGAPIA-VGVS 74
++I+ +++ WF + P A+ ++ GG++ G+ P+A V +
Sbjct 9 WVIVIVVVIAAIAAFWFWQGRNDSQSAAPGATKQAQQSPAGGRR---GMRSGPLAPVQAA 65
Query 75 KVVQQDVQQTIQALGTVTSSNTVVVHPLINGTLMQIYFKEGGLVHKGQLLALIDDRAPKA 134
V+Q V + + LGT+T++NTV V ++G LM ++F+EG V G LLA ID K
Sbjct 66 TAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPSQFKV 125
Query 135 ALLQAQGQLLKDQALLTNAQLDLQRYAQLWQQDSIAKQQYDTQASLVKQYQGVLKTDQAA 194
AL QAQGQL KD+A L NA+ DL RY QL + + +++Q+ D Q +LV + +G +K D+A+
Sbjct 126 ALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKADEAS 185
Query 195 VDNAKLQLSYTRVVSPVDGRIGLRQIDVGNMVNSSDTNGIANITQLKNISVVFAVPEQYL 254
V +A+LQL ++R+ +PVDGR+GL+Q+DVGN ++S DT GI ITQ I +VF +PE +
Sbjct 186 VASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHPIDLVFTLPESDI 245
Query 255 TQLMQITDHPDQPIEVAAWDRQNTQKLADGKLVALDNQVNVTTGTINIKASFDNHNQHLF 314
++Q +P+ V AWDR N++KL++G L++LDNQ++ TTGTI +KA F+N + LF
Sbjct 246 ATVVQ-AQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVKARFNNQDDALF 304
Query 315 PNQFVNVRMSLGNIPNALIVPTVALQLGAHGSFVYKVNSDQKVSAVNVQTGTVVEDNTVI 374
PNQFVN RM + NA+++PT ALQ+G G FV+ +NS+ KVS V G VI
Sbjct 305 PNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVTPGIQDSQKVVI 364
Query 375 TGGALNANDTVVTDGVDKLKDGAKITLASA 404
G ++A D VVTDG+D+L +GAK+ + A
Sbjct 365 RAG-ISAGDRVVTDGIDRLTEGAKVEVVEA 393
>A6TBH3 Multidrug resistance protein MdtA [Klebsiella pneumoniae
subsp. pneumoniae (strain ATCC 700721 / MGH 78578)]
Length=412
Score = 306 bits (785), Expect = 5e-104
Identities = 165/381 (43%), Positives = 244/381 (64%), Gaps = 6/381 (2%)
Query 29 ILFLVGWGIWFLTHQPIASARSGAHGKGGQKAG---LGLNGAPIA-VGVSKVVQQDVQQT 84
++ + G WF + + + + A G+G Q G G GA +A V + ++ V +
Sbjct 15 VVIIAGAAYWFWHDRGTSGSGAPAAGQGPQGPGGARHGRFGAALAPVQAATATEEAVPRY 74
Query 85 IQALGTVTSSNTVVVHPLINGTLMQIYFKEGGLVHKGQLLALIDDRAPKAALLQAQGQLL 144
+ LGTVT++NTV V ++G L+ ++F+EG V G LLA ID K AL QAQGQL
Sbjct 75 LTGLGTVTAANTVTVRSRVDGQLLSLHFQEGQQVKAGDLLAQIDPSQFKVALAQAQGQLA 134
Query 145 KDQALLTNAQLDLQRYAQLWQQDSIAKQQYDTQASLVKQYQGVLKTDQAAVDNAKLQLSY 204
KDQA L NA+ DL RY QL + + +++Q+ DTQ SLV + G +K D+AAV +A+LQL +
Sbjct 135 KDQATLANARRDLARYQQLVKTNLVSRQELDTQQSLVVESAGTVKADEAAVASAQLQLDW 194
Query 205 TRVVSPVDGRIGLRQIDVGNMVNSSDTNGIANITQLKNISVVFAVPEQYLTQLMQITDHP 264
TR+ +P+DGR+GL+Q+D+GN ++S DT GI +TQ I VVF +PE + ++Q
Sbjct 195 TRITAPIDGRVGLKQVDIGNQISSGDTTGIVVLTQTHPIDVVFTLPESSIATVVQ-AQKA 253
Query 265 DQPIEVAAWDRQNTQKLADGKLVALDNQVNVTTGTINIKASFDNHNQHLFPNQFVNVRMS 324
+ + V AWDR N QK++ G+L++LDNQ++ TTGTI +KA F N + LFPNQFVN R+
Sbjct 254 GKALSVEAWDRTNKQKISVGELLSLDNQIDATTGTIKLKARFSNLDDALFPNQFVNARLL 313
Query 325 LGNIPNALIVPTVALQLGAHGSFVYKVNSDQKVSAVNVQTGTVVEDNTVITGGALNANDT 384
+ NA+++P ALQ+G G FV+ +N + KVS +V G VI+ G L+A D
Sbjct 314 VDTQQNAVVIPAAALQMGNEGHFVWVLNDENKVSKHSVTPGIQDSQKVVISAG-LSAGDR 372
Query 385 VVTDGVDKLKDGAKITLASAA 405
VVTDG+D+L +GAK+ + +A+
Sbjct 373 VVTDGIDRLTEGAKVEVVTAS 393
>B7NQB2 Multidrug resistance protein MdtA [Escherichia coli O7:K1
(strain IAI39 / ExPEC)]
Length=415
Score = 306 bits (784), Expect = 7e-104
Identities = 165/400 (41%), Positives = 252/400 (63%), Gaps = 13/400 (3%)
Query 23 YIILFIILFLVGWGIWFLTHQ-------PIASARSGAHGKGGQKAGLGLNGAPIA-VGVS 74
++I+ +++ WF + P A+ ++ GG++ G+ P+A V +
Sbjct 9 WVIVIVVVIAAIAAFWFWQGRNDSRSAAPGATKQAQQSPAGGRR---GMRAGPLAPVQAA 65
Query 75 KVVQQDVQQTIQALGTVTSSNTVVVHPLINGTLMQIYFKEGGLVHKGQLLALIDDRAPKA 134
V+Q V + + LGT+T++NTV V ++G LM ++F+EG V G LLA ID K
Sbjct 66 TAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPSQFKV 125
Query 135 ALLQAQGQLLKDQALLTNAQLDLQRYAQLWQQDSIAKQQYDTQASLVKQYQGVLKTDQAA 194
AL QAQGQL KD+A L NA+ DL RY QL + + +++Q+ D Q +LV + +G +K D+A+
Sbjct 126 ALAQAQGQLAKDKATLANARRDLARYQQLVKTNLVSRQELDAQQALVSETEGTIKADEAS 185
Query 195 VDNAKLQLSYTRVVSPVDGRIGLRQIDVGNMVNSSDTNGIANITQLKNISVVFAVPEQYL 254
V +A+LQL ++R+ +PVDGR+GL+Q+DVGN ++S DT GI ITQ I ++F +PE +
Sbjct 186 VASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHPIDLLFTLPESDI 245
Query 255 TQLMQITDHPDQPIEVAAWDRQNTQKLADGKLVALDNQVNVTTGTINIKASFDNHNQHLF 314
++Q +P+ V AWDR N++KL++G L++LDNQ++ TTGTI +KA F+N + LF
Sbjct 246 ATVVQ-AQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVKARFNNQDDALF 304
Query 315 PNQFVNVRMSLGNIPNALIVPTVALQLGAHGSFVYKVNSDQKVSAVNVQTGTVVEDNTVI 374
PNQFVN RM + NA+++PT ALQ+G G FV+ +NS+ KVS V G VI
Sbjct 305 PNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVTPGIQDSQKVVI 364
Query 375 TGGALNANDTVVTDGVDKLKDGAKITLASAAHHGLGQHRA 414
G ++A D VVTDG+D+L +GAK+ + A + +A
Sbjct 365 RAG-ISAGDRVVTDGIDRLTEGAKVEVVEAQSATTSEEKA 403
>P76397 Multidrug resistance protein MdtA [Escherichia coli (strain
K12)]
Length=415
Score = 305 bits (782), Expect = 1e-103
Identities = 164/390 (42%), Positives = 249/390 (64%), Gaps = 13/390 (3%)
Query 23 YIILFIILFLVGWGIWFLTHQ-------PIASARSGAHGKGGQKAGLGLNGAPIA-VGVS 74
++I+ +++ WF + P A+ ++ GG++ G+ P+A V +
Sbjct 9 WVIVIVVVIAAIAAFWFWQGRNDSRSAAPGATKQAQQSPAGGRR---GMRSGPLAPVQAA 65
Query 75 KVVQQDVQQTIQALGTVTSSNTVVVHPLINGTLMQIYFKEGGLVHKGQLLALIDDRAPKA 134
V+Q V + + LGT+T++NTV V ++G L+ ++F+EG V G LLA ID K
Sbjct 66 TAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLIALHFQEGQQVKAGDLLAEIDPSQFKV 125
Query 135 ALLQAQGQLLKDQALLTNAQLDLQRYAQLWQQDSIAKQQYDTQASLVKQYQGVLKTDQAA 194
AL QAQGQL KD+A L NA+ DL RY QL + + +++Q+ D Q +LV + +G +K D+A+
Sbjct 126 ALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKADEAS 185
Query 195 VDNAKLQLSYTRVVSPVDGRIGLRQIDVGNMVNSSDTNGIANITQLKNISVVFAVPEQYL 254
V +A+LQL ++R+ +PVDGR+GL+Q+DVGN ++S DT GI ITQ I +VF +PE +
Sbjct 186 VASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHPIDLVFTLPESDI 245
Query 255 TQLMQITDHPDQPIEVAAWDRQNTQKLADGKLVALDNQVNVTTGTINIKASFDNHNQHLF 314
++Q +P+ V AWDR N++KL++G L++LDNQ++ TTGTI +KA F+N + LF
Sbjct 246 ATVVQ-AQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVKARFNNQDDALF 304
Query 315 PNQFVNVRMSLGNIPNALIVPTVALQLGAHGSFVYKVNSDQKVSAVNVQTGTVVEDNTVI 374
PNQFVN RM + NA+++PT ALQ+G G FV+ +NS+ KVS V G VI
Sbjct 305 PNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVTPGIQDSQKVVI 364
Query 375 TGGALNANDTVVTDGVDKLKDGAKITLASA 404
G ++A D VVTDG+D+L +GAK+ + A
Sbjct 365 RAG-ISAGDRVVTDGIDRLTEGAKVEVVEA 393
>D4I6V2 Multidrug resistance protein MdtA [Erwinia amylovora (strain
ATCC 49946 / CCPPB 0273 / Ea273 / 27-3)]
Length=405
Score = 288 bits (737), Expect = 6e-97
Identities = 155/372 (42%), Positives = 229/372 (62%), Gaps = 9/372 (2%)
Query 38 WFLTHQPIASARSGAHGKGGQKAGLGLNGAPIA-----VGVSKVVQQDVQQTIQALGTVT 92
W+ +H AS G Q+A A A V ++ ++Q+V Q + LGTVT
Sbjct 25 WWYSHST-ASTVQNRQGTEQQRASNSQGSAKRAGNAPPVQAAEALRQNVPQYLSGLGTVT 83
Query 93 SSNTVVVHPLINGTLMQIYFKEGGLVHKGQLLALIDDRAPKAALLQAQGQLLKDQALLTN 152
++NTV + ++G L+ ++F EG V GQLLA ID R + AL+QA+GQL KD+A LTN
Sbjct 84 AANTVTLRSRVDGDLVALHFNEGQEVAAGQLLAEIDPRPYEVALMQAEGQLAKDRATLTN 143
Query 153 AQLDLQRYAQLWQQDSIAKQQYDTQASLVKQYQGVLKTDQAAVDNAKLQLSYTRVVSPVD 212
A+ DL RY +L Q ++ Q+ DTQ + V + G +K D+ +V +A+L L+Y+RV +P+
Sbjct 144 ARRDLARYEKLAQTQLVSAQELDTQRARVSETLGTIKADEGSVASARLNLTYSRVTAPIA 203
Query 213 GRIGLRQIDVGNMVNSSDTNGIANITQLKNISVVFAVPEQYLTQLMQITDHPDQPIEVAA 272
GR+GL+Q+DVGN V+S D NGI I Q I +VF++PE + ++ + P+E A
Sbjct 204 GRVGLKQVDVGNYVSSGDANGIVVIAQTHPIDLVFSLPESDIASVLSAQKNGKLPVE--A 261
Query 273 WDRQNTQKLADGKLVALDNQVNVTTGTINIKASFDNHNQHLFPNQFVNVRMSLGNIPNAL 332
WDR N L G L+++DNQ++ TTGT+ +KA FDN + LFPNQFVN R+ +G + +A+
Sbjct 262 WDRNNKNLLTRGTLLSMDNQIDSTTGTVKLKARFDNQDDRLFPNQFVNARLKIGTLEDAI 321
Query 333 IVPTVALQLGAHGSFVYKVNSDQKVSAVNVQTGTVVEDNTVITGGALNANDTVVTDGVDK 392
++P ALQ+G FV+ +N D VS V +G VI+ G L A + VVTDG+D+
Sbjct 322 VIPAAALQMGNESHFVWVINGDSTVSKKIVASGLQGSGQVVISAG-LQAGEKVVTDGIDR 380
Query 393 LKDGAKITLASA 404
L DGA+ + A
Sbjct 381 LTDGAQTEIVPA 392
>P0AE06 Multidrug efflux pump subunit AcrA [Escherichia coli (strain
K12)]
Length=397
Score = 149 bits (375), Expect = 1e-43
Identities = 107/358 (30%), Positives = 167/358 (47%), Gaps = 11/358 (3%)
Query 48 ARSGAHGKGGQKAGLGLNGAPIAVGVSKVVQQDVQQTIQALGTVTSSNTVVVHPLINGTL 107
A +G K Q+ G + AVGV V + +Q T + G ++ V P ++G +
Sbjct 21 ALTGCDDKQAQQGGQQMP----AVGVVTVKTEPLQITTELPGRTSAYRIAEVRPQVSGII 76
Query 108 MQIYFKEGGLVHKGQLLALIDDRAPKAALLQAQGQLLKDQALLTNAQLDLQRYAQLWQQD 167
++ FKEG + G L ID +A A+G L K QA AQL + RY +L
Sbjct 77 LKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQ 136
Query 168 SIAKQQYDTQASLVKQYQGVLKTDQAAVDNAKLQLSYTRVVSPVDGRIGLRQIDVGNMVN 227
I+KQ+YD + +Q + +AAV+ A++ L+YT+V SP+ GRIG + G +V
Sbjct 137 YISKQEYDQALADAQQANAAVTAAKAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQ 196
Query 228 SSDTNGIANITQLKNISVVFAVPEQYLTQLMQ-----ITDHPDQPIEVAAWDRQNTQKLA 282
+ +A + QL I V +L Q + +V+ +
Sbjct 197 NGQATALATVQQLDPIYVDVTQSSNDFLRLKQELANGTLKQENGKAKVSLITSDGIKFPQ 256
Query 283 DGKLVALDNQVNVTTGTINIKASFDNHNQHLFPNQFVNVRMSLGNIPNALIVPTVALQLG 342
DG L D V+ TTG+I ++A F N + L P FV R+ G PNA++VP +
Sbjct 257 DGTLEFSDVTVDQTTGSITLRAIFPNPDHTLLPGMFVRARLEEGLNPNAILVPQQGVTRT 316
Query 343 AHG-SFVYKVNSDQKVSAVNVQTGTVVEDNTVITGGALNANDTVVTDGVDKLKDGAKI 399
G + V V +D KV + + D ++T G L A D VV G+ K++ G ++
Sbjct 317 PRGDATVLVVGADDKVETRPIVASQAIGDKWLVTEG-LKAGDRVVISGLQKVRPGVQV 373
>Q8FWV8 Efflux pump periplasmic linker BepF [Brucella suis biovar
1 (strain 1330)]
Length=411
Score = 140 bits (354), Expect = 1e-40
Identities = 96/336 (29%), Positives = 165/336 (49%), Gaps = 8/336 (2%)
Query 68 PIAVGVSKVVQQDVQQTIQALGTVTSSNTVVVHPLINGTLMQIYFKEGGLVHKGQLLALI 127
PI VGV K+ ++ + +G V ++++V + ++G L + F EG V G LL ++
Sbjct 61 PIPVGVIKITERPTHPQLSFVGRVEATDSVDLIARVDGFLDKRTFTEGQAVKTGDLLFVL 120
Query 128 DDRAPKAALLQAQGQLLKDQALLTNAQLDLQRYAQLWQQDSIAKQQYDTQASLVKQYQGV 187
A +AAL AQ L K QA N +L +R L++Q ++++ D + + KQ V
Sbjct 121 QKDALQAALDAAQANLAKAQADADNLKLQTERARSLYKQKTVSQAMLDDRVAAEKQALAV 180
Query 188 LKTDQAAVDNAKLQLSYTRVVSPVDGRIGLRQIDVGNMVNSSDTNGIANITQLKNISVVF 247
++ QA+++ A++ L YT + +P GRIG+ VG +V S + +A I I V F
Sbjct 181 VQQAQASLEQAQINLGYTDIRAPFSGRIGMANFSVGALVGPS-SGPLATIVSQDPIYVTF 239
Query 248 AVPEQYLTQLMQ----ITDHPDQPIEVAAWDRQNTQKLADGKLVALDNQVNVTTGTINIK 303
V ++ + L + TD + + + + + G + ++N T T+ ++
Sbjct 240 PVSDKTILDLTEGGRTATDRSNVAVSLTLSNGMTYPQ--TGAIDFTGIKINPNTDTLMVR 297
Query 304 ASFDNHNQHLFPNQFVNVRMSLGNIPNALIVPTVALQLGAHGSFVYKVNSDQKVSAVNVQ 363
A F N N L Q+V V + + AL+VP A+ G++V V D KV +
Sbjct 298 AQFPNPNNVLIDGQYVQVTAASKHPVEALLVPQKAIMTDQSGNYVLAVGEDNKVIQRQIT 357
Query 364 TGTVVEDNTVITGGALNANDTVVTDGVDKLKDGAKI 399
G+ N V+ G L D VV DG+ +++ G K+
Sbjct 358 QGSTFGSNVVVKSG-LAVGDQVVVDGLQRIRPGQKV 392
>P43505 Membrane fusion protein MtrC [Neisseria gonorrhoeae]
Length=412
Score = 139 bits (351), Expect = 4e-40
Identities = 109/347 (31%), Positives = 162/347 (47%), Gaps = 9/347 (3%)
Query 49 RSGAHGKGGQKAGLGLNGAPIAVGVSKVVQQDVQQTIQALGTVTSSNTVVVHPLINGTLM 108
+ G +GGQ AG AP+ VGV V Q V T++ G + S T V + G +
Sbjct 27 KGGDAAQGGQPAGREAP-APV-VGVVTVHPQTVALTVELPGRLESLRTADVRAQVGGIIQ 84
Query 109 QIYFKEGGLVHKGQLLALIDDRAPKAALLQAQGQLLKDQALLTNAQLDLQRYAQLWQQDS 168
+ F+EG V GQ L ID +A L A+ QL QA L A DL RY L D+
Sbjct 85 KRLFQEGSYVRAGQPLYQIDSSTYEAGLESARAQLATAQATLAKADADLARYKPLVSADA 144
Query 169 IAKQQYDTQASLVKQYQGVLKTDQAAVDNAKLQLSYTRVVSPVDGRIGLRQIDVGNMVNS 228
I+KQ+YD + + + +K QAA+ +A + L+ +R+ +P+ G IG ++ G ++N+
Sbjct 145 ISKQEYDAAVTAKRSAEASVKAAQAAIKSAGINLNRSRITAPISGFIGQSKVSEGTLLNA 204
Query 229 SDTNGIANITQLKNISV-VFAVPEQYLTQLMQITD----HPDQPIEVAAWDRQNTQKLAD 283
DT +A I Q + V V + + QI + D I V T
Sbjct 205 GDTTVLATIRQTNPMYVNVTQSASEVMKLRRQIAEGKLLAADGAIAVGIKFDDGTVYPEK 264
Query 284 GKLVALDNQVNVTTGTINIKASFDNHNQHLFPNQFVNVRMSLGNIPNALIVPTVALQLGA 343
G+L+ D V+ +TG I ++A+ N L P +V V M NA IVP A+ GA
Sbjct 265 GRLLFADPTVDESTGQITLRAAVSNDQNILMPGLYVRVLMDQVAADNAFIVPQQAVTRGA 324
Query 344 HGSFVYKVNSDQKVSAVNVQTGTVVEDNTVITGGALNANDTVVTDGV 390
+ V VN+ + V N ++T G L D VV +G+
Sbjct 325 KDT-VMIVNAQGGMEPREVTVAQQQGTNWIVTSG-LKDGDKVVVEGI 369
>P52477 Multidrug resistance protein MexA [Pseudomonas aeruginosa
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847
/ LMG 12228 / 1C / PRS 101 / PAO1)]
Length=383
Score = 130 bits (328), Expect = 4e-37
Identities = 98/342 (29%), Positives = 159/342 (46%), Gaps = 24/342 (7%)
Query 71 VGVSKVVQQDVQQTIQALGTVTSSNTVVVHPLINGTLMQIYFKEGGLVHKGQLLALIDDR 130
VG+ + Q V + G + V P +NG +++ FKEG V GQ L ID
Sbjct 38 VGIVTLEAQTVTLNTELPGRTNAFRIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPA 97
Query 131 APKAALLQAQGQLLKDQALLTNAQLDLQRYAQLWQQDSIAKQQY-DTQASLVKQYQGVLK 189
+A AQ A L + Q QRY L +++KQQY D A+ ++
Sbjct 98 TYEADYQSAQ-------ANLASTQEQAQRYKLLVADQAVSKQQYADANAAYLQS------ 144
Query 190 TDQAAVDNAKLQLSYTRVVSPVDGRIGLRQIDVGNMVNSSDTNGIANITQLKNISVVFAV 249
+AAV+ A++ L YT+V+SP+ GRIG + G +V + N +A + QL I V
Sbjct 145 --KAAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQANAMATVQQLDPIYVDVTQ 202
Query 250 PEQYLTQLM------QITDHPDQPIEVAAWDRQNTQKLADGKLVALDNQVNVTTGTINIK 303
P L +L Q+ D +V+ +Q +G+L + V+ TG++ I+
Sbjct 203 PSTALLRLRRELASGQLERAGDNAAKVSLKLEDGSQYPLEGRLEFSEVSVDEGTGSVTIR 262
Query 304 ASFDNHNQHLFPNQFVNVRMSLGNIPNALIVPTVALQLGAHG-SFVYKVNSDQKVSAVNV 362
A F N N L P FV+ ++ G A++ P + G + VN+ KV +
Sbjct 263 AVFPNPNNELLPGMFVHAQLQEGVKQKAILAPQQGVTRDLKGQATALVVNAQNKVELRVI 322
Query 363 QTGTVVEDNTVITGGALNANDTVVTDGVDKLKDGAKITLASA 404
+ V+ D ++T G LNA D ++T+G+ ++ G ++ A
Sbjct 323 KADRVIGDKWLVTEG-LNAGDKIITEGLQFVQPGVEVKTVPA 363
>P24180 Multidrug export protein AcrE [Escherichia coli (strain
K12)]
Length=385
Score = 130 bits (328), Expect = 4e-37
Identities = 99/360 (28%), Positives = 166/360 (46%), Gaps = 11/360 (3%)
Query 46 ASARSGAHGKGGQKAGLGLNGAPIAVGVSKVVQQDVQQTIQALGTVTSSNTVVVHPLING 105
A+ +G + KG +KA +G + V + K +V+ + G + V P ++G
Sbjct 18 AALIAGCNDKGEEKAHVG--EPQVTVHIVKTAPLEVKTELP--GRTNAYRIAEVRPQVSG 73
Query 106 TLMQIYFKEGGLVHKGQLLALIDDRAPKAALLQAQGQLLKDQALLTNAQLDLQRYAQLWQ 165
++ F EG V GQ L ID +A A+G+L K +A A L ++RY L
Sbjct 74 IVLNRNFTEGSDVQAGQSLYQIDPATYQANYDSAKGELAKSEAAAAIAHLTVKRYVPLVG 133
Query 166 QDSIAKQQYDTQASLVKQYQGVLKTDQAAVDNAKLQLSYTRVVSPVDGRIGLRQIDVGNM 225
I++Q+YD + +Q + +A V++A++ L+YT+V +P+ GRIG + G +
Sbjct 134 TKYISQQEYDQAIADARQADAAVIAAKATVESARINLAYTKVTAPISGRIGKSTVTEGAL 193
Query 226 VNSSDTNGIANITQLKNISVVFAVPEQYLTQLMQITD----HPDQPIEVAAWDRQNTQKL 281
V + T +A + QL I V +L Q + H + +N Q
Sbjct 194 VTNGQTTELATVQQLDPIYVDVTQSSNDFMRLKQSVEQGNLHKENATSNVELVMENGQTY 253
Query 282 -ADGKLVALDNQVNVTTGTINIKASFDNHNQHLFPNQFVNVRMSLGNIPNALIVPTVALQ 340
G L D V+ +TG+I ++A F N L P FV R+ G P+A+++P +
Sbjct 254 PLKGTLQFSDVTVDESTGSITLRAVFPNPQHTLLPGMFVRARIDEGVQPDAILIPQQGVS 313
Query 341 LGAHG-SFVYKVNSDQKVSAVNVQTGTVVEDNTVITGGALNANDTVVTDGVDKLKDGAKI 399
G + V VN +V A V + D +I+ G L + D V+ G+ K + G ++
Sbjct 314 RTPRGDATVLIVNDKSQVEARPVVASQAIGDKWLISEG-LKSGDQVIVSGLQKARPGEQV 372
>Q88N30 Probable efflux pump periplasmic linker TtgA [Pseudomonas
putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB
11950 / KT2440)]
Length=384
Score = 126 bits (316), Expect = 2e-35
Identities = 93/343 (27%), Positives = 164/343 (48%), Gaps = 22/343 (6%)
Query 71 VGVSKVVQQDVQQTIQALGTVTSSNTVVVHPLINGTLMQIYFKEGGLVHKGQLLALIDDR 130
VGV + Q T + G ++ V P +NG +++ FKEG V +GQ L ID
Sbjct 37 VGVVTIQPQAFTLTSELPGRTSAYRVAEVRPQVNGIILKRLFKEGSEVKEGQQLYQIDPA 96
Query 131 APKAALLQAQGQLLKDQALLTNAQLDLQRYAQLWQQDSIAKQQYDTQASLVKQYQGVLKT 190
+A L A+ LL ++L +RY QL + +++KQ+YD + K+ Q
Sbjct 97 VYEATLANAKANLLATRSLA-------ERYKQLIDEQAVSKQEYDDANA--KRLQA---- 143
Query 191 DQAAVDNAKLQLSYTRVVSPVDGRIGLRQIDVGNMVNSSDTNGIANITQLKNISVVFAVP 250
+A++ +A++ L YT+V++P+ GRIG G +V++ T+ +A I QL I V
Sbjct 144 -EASLKSAQIDLRYTKVLAPISGRIGRSSFTEGALVSNGQTDAMATIQQLDPIYVDVTQS 202
Query 251 EQYLTQLM------QITDHPDQPIEVAAWDRQNTQKLADGKLVALDNQVNVTTGTINIKA 304
L +L Q+ D V + +G+L + V+ TTG++ ++A
Sbjct 203 TAELLKLRRDLESGQLQKAGDNAASVQLVLEDGSLFKQEGRLEFSEVAVDETTGSVTLRA 262
Query 305 SFDNHNQHLFPNQFVNVRMSLGNIPNALIVPTVALQLGAHGS-FVYKVNSDQKVSAVNVQ 363
F N + L P FV+ R+ G NA++ P + G+ VN + KV ++
Sbjct 263 LFPNPDHTLLPGMFVHARLKAGVNANAILAPQQGVTRDLKGAPTALVVNQENKVELRQLK 322
Query 364 TGTVVEDNTVITGGALNANDTVVTDGVDKLKDGAKITLASAAH 406
+ + +I G LN D ++T+G+ ++ G ++ ++ A +
Sbjct 323 ASRTLGSDWLIEEG-LNPGDRLITEGLQYVRPGVEVKVSDATN 364
>P0C069 Multidrug/solvent efflux pump periplasmic linker protein
MepA [Pseudomonas putida]
Length=384
Score = 126 bits (316), Expect = 2e-35
Identities = 93/343 (27%), Positives = 164/343 (48%), Gaps = 22/343 (6%)
Query 71 VGVSKVVQQDVQQTIQALGTVTSSNTVVVHPLINGTLMQIYFKEGGLVHKGQLLALIDDR 130
VGV + Q T + G ++ V P +NG +++ FKEG V +GQ L ID
Sbjct 37 VGVVTIQPQAFTLTSELPGRTSAYRVAEVRPQVNGIILKRLFKEGSEVKEGQQLYQIDPA 96
Query 131 APKAALLQAQGQLLKDQALLTNAQLDLQRYAQLWQQDSIAKQQYDTQASLVKQYQGVLKT 190
+A L A+ LL ++L +RY QL + +++KQ+YD + K+ Q
Sbjct 97 VYEATLANAKANLLATRSLA-------ERYKQLIDEQAVSKQEYDDANA--KRLQA---- 143
Query 191 DQAAVDNAKLQLSYTRVVSPVDGRIGLRQIDVGNMVNSSDTNGIANITQLKNISVVFAVP 250
+A++ +A++ L YT+V++P+ GRIG G +V++ T+ +A I QL I V
Sbjct 144 -EASLKSAQIDLRYTKVLAPISGRIGRSSFTEGALVSNGQTDAMATIQQLDPIYVDVTQS 202
Query 251 EQYLTQLM------QITDHPDQPIEVAAWDRQNTQKLADGKLVALDNQVNVTTGTINIKA 304
L +L Q+ D V + +G+L + V+ TTG++ ++A
Sbjct 203 TAELLKLRRDLESGQLQKAGDNAASVQLVLEDGSLFKQEGRLEFSEVAVDETTGSVTLRA 262
Query 305 SFDNHNQHLFPNQFVNVRMSLGNIPNALIVPTVALQLGAHGS-FVYKVNSDQKVSAVNVQ 363
F N + L P FV+ R+ G NA++ P + G+ VN + KV ++
Sbjct 263 LFPNPDHTLLPGMFVHARLKAGVNANAILAPQQGVTRDLKGAPTALVVNQENKVELRQLK 322
Query 364 TGTVVEDNTVITGGALNANDTVVTDGVDKLKDGAKITLASAAH 406
+ + +I G LN D ++T+G+ ++ G ++ ++ A +
Sbjct 323 ASRTLGSDWLIEEG-LNPGDRLITEGLQYVRPGVEVKVSDATN 364
>Q9WWZ9 Toluene efflux pump periplasmic linker protein TtgA [Pseudomonas
putida (strain DOT-T1E)]
Length=384
Score = 125 bits (314), Expect = 3e-35
Identities = 95/345 (28%), Positives = 168/345 (49%), Gaps = 26/345 (8%)
Query 71 VGVSKVVQQDVQQTIQALGTVTSSNTVVVHPLINGTLMQIYFKEGGLVHKGQLLALIDDR 130
VGV + Q T + G ++ V P +NG +++ FKEG V +GQ L ID
Sbjct 37 VGVVTIQPQAFTLTSELPGRTSAYRVAEVRPQVNGIILKRLFKEGSEVKEGQQLYQIDPA 96
Query 131 APKAALLQAQGQLLKDQALLTNAQLDLQRYAQLWQQDSIAKQQYDTQASLVKQYQGVLKT 190
+A L A+ LL ++L +RY QL + +++KQ+YD + K+ Q
Sbjct 97 VYEATLANAKANLLATRSLA-------ERYKQLIDEQAVSKQEYDDANA--KRLQA---- 143
Query 191 DQAAVDNAKLQLSYTRVVSPVDGRIGLRQIDVGNMVNSSDTNGIANITQLKNISVVFAVP 250
+A++ +A++ L YT+V++P+ GRIG G +V++ T+ +A I QL I V
Sbjct 144 -EASLKSAQIDLRYTKVLAPISGRIGRSSFTEGALVSNGQTDAMATIQQLDPIYVDVTQS 202
Query 251 EQYLTQLMQITDHPDQPIEVAAWDRQNTQ-KLADGKLVALDNQ-------VNVTTGTINI 302
L +L + D ++ A + + Q L DG L + + V+ TTG++ +
Sbjct 203 TAELLKLRR--DLESGQLQKAGNNAASVQLVLEDGSLFKQEGRLEFSEVAVDETTGSVTL 260
Query 303 KASFDNHNQHLFPNQFVNVRMSLGNIPNALIVPTVALQLGAHGS-FVYKVNSDQKVSAVN 361
+A F N + L P FV+ R+ G NA++ P + G+ VN + KV
Sbjct 261 RALFPNPDHTLLPGMFVHARLKAGVNANAILAPQQGVTRDLKGAPTALVVNQENKVELRQ 320
Query 362 VQTGTVVEDNTVITGGALNANDTVVTDGVDKLKDGAKITLASAAH 406
++ + + +I G LN D ++T+G+ ++ G ++ ++ A +
Sbjct 321 LKASRTLGSDWLIEEG-LNPGDRLITEGLQYVRPGVEVKVSDATN 364
>O31099 Solvent efflux pump periplasmic linker SrpA [Pseudomonas
putida]
Length=382
Score = 125 bits (313), Expect = 5e-35
Identities = 101/360 (28%), Positives = 164/360 (46%), Gaps = 22/360 (6%)
Query 57 GQKAGLGLNGAPIAVGVSKVVQQDVQQTIQALGTVTSSNTVVVHPLINGTLMQIYFKEGG 116
G+K + P VGV V Q + T G ++ V P ++G L + F EG
Sbjct 25 GEKEQVSSATPPPDVGVYTVRAQALTLTTDLPGRTSAFRVAEVRPQVSGILQKRSFVEGA 84
Query 117 LVHKGQLLALIDDRAPKAALLQAQGQLLKDQALLTNAQLDLQRYAQLWQQDSIAKQQYDT 176
V GQ L ID R +A QL + +A T+AQ +RY L + +++KQQYD
Sbjct 85 EVKLGQQLYQIDPRTYEA-------QLRRAEANRTSAQNLARRYETLLKTKAVSKQQYDD 137
Query 177 QASLVKQYQGVLKTDQAAVDNAKLQLSYTRVVSPVDGRIGLRQIDVGNMVNSSDTNGIAN 236
+ KQ + A A++ + YTRV+SP+ GRIG + G +V + +A
Sbjct 138 ALAAWKQAE-------ADYQVARIDVQYTRVLSPISGRIGRSTVTEGALVTNGQAQSLAT 190
Query 237 ITQLKNISVVFAVPEQYLTQLMQITDH------PDQPIEVAAWDRQNTQKLADGKLVALD 290
+TQL I V P L L + + + EV+ + G L +
Sbjct 191 VTQLDPIYVDVTQPITKLLGLQKALESGRLQKTGENQAEVSLTLDDGSAYPLPGTLKFSE 250
Query 291 NQVNVTTGTINIKASFDNHNQHLFPNQFVNVRMSLGNIPNALIVPTVALQLGAHG-SFVY 349
V+ TTG++ ++A F N N+ L P FV+ + G A++VP A+ G V+
Sbjct 251 VSVDPTTGSVTLRAEFPNPNRKLLPGMFVHALLKEGVQNAAILVPQQAISRDTRGVPSVW 310
Query 350 KVNSDQKVSAVNVQTGTVVEDNTVITGGALNANDTVVTDGVDKLKDGAKITLASAAHHGL 409
V +D V + +QT V + +I+ G + + ++T+GV +++ G + A + L
Sbjct 311 VVKADNTVESREIQTLRTVGNAWLISNG-VTEGERIITEGVQRVRSGIAVNAVEAKNVNL 369
Lambda K H a alpha
0.317 0.132 0.372 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3331410
Database: fefd245f56c669a95316789785ff3df3.SwissProt.fasta
Posted date: May 30, 2024 3:52 PM
Number of letters in database: 10,140
Number of sequences in database: 25
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
