BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 14f65d57e910d855c86175cf20b67d2f.SwissProt.fasta
13 sequences; 4,132 total letters
Query= ACIAD3408
Length=359
Score E
Sequences producing significant alignments: (Bits) Value
Q502K1 Nuclease EXOG, mitochondrial [Danio rerio] 100 2e-27
Q14249 Endonuclease G, mitochondrial [Homo sapiens] 97.4 1e-26
P38447 Endonuclease G, mitochondrial [Bos taurus] 95.5 7e-26
P81203 Nuclease C1 [Cunninghamella echinulata var. echinulata] 92.4 4e-25
O08600 Endonuclease G, mitochondrial [Mus musculus] 91.3 2e-24
Q0IH72 Nuclease EXOG, mitochondrial [Xenopus laevis] 88.6 4e-23
P38446 Nuclease [Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2... 84.0 7e-22
Q9Y2C4 Nuclease EXOG, mitochondrial [Homo sapiens] 84.7 1e-21
P08466 Mitochondrial nuclease [Saccharomyces cerevisiae (strain A... 84.0 1e-21
Q8C163 Nuclease EXOG, mitochondrial [Mus musculus] 80.1 4e-20
P81204 Nuclease [Syncephalastrum racemosum] 74.3 2e-18
Q10480 Nuclease 1, mitochondrial [Schizosaccharomyces pombe (stra... 72.8 8e-18
Q95NM6 Endonuclease G, mitochondrial [Caenorhabditis elegans] 66.2 1e-15
>Q502K1 Nuclease EXOG, mitochondrial [Danio rerio]
Length=343
Score = 100 bits (249), Expect = 2e-27
Identities = 76/223 (34%), Positives = 109/223 (49%), Gaps = 22/223 (10%)
Query 69 GSLQSNSYALCFNGFNVMYSGVSKTPLWSAEHLTPQRLSTKIKREDSFHEETRISNASHR 128
G +S + + + + Y +TP W AEHL+ RL + R+
Sbjct 47 GLPESGAESRFYTNHVLSYDQTHRTPRWVAEHLSSTRLLGEANRKQCKFRPDPSVPELFT 106
Query 129 ALLSDYRGSGYDRGHMSPNGD-MSDTKAQQDSFSLANMVPQAPKNNQHIWRELEEATRAL 187
A DY SG+ RGHM+P GD S +A ++F L+N+VPQ +NN W LE R L
Sbjct 107 AHNEDYLKSGWSRGHMAPAGDNKSSEQAMAETFYLSNIVPQNYENNAGFWNRLEMYCREL 166
Query 188 VVKQKQDVFVVTGPVF------EGKR---LKTIGRG-VIVPTAVYKAVYLPKTG-----A 232
K DV+VV+GP+ +GK+ + IG+ V VPT +YK + K A
Sbjct 167 TEK-FSDVWVVSGPLMKPQITDDGKKTVSYQLIGKDEVAVPTHLYKVILAQKDPSSDALA 225
Query 233 IGAYYAPN-----NNSLEVRVVSVCYLEEKLGINLFPQLTEQQ 270
+GA+ PN + L+ VSVC LE + G+ FP L +QQ
Sbjct 226 VGAFVVPNAPIGFQHQLQEFQVSVCDLERESGLVFFPALQKQQ 268
>Q14249 Endonuclease G, mitochondrial [Homo sapiens]
Length=297
Score = 97.4 bits (241), Expect = 1e-26
Identities = 67/181 (37%), Positives = 97/181 (54%), Gaps = 24/181 (13%)
Query 75 SYALCFNGFNVMYSGVSKTPLWSAEHLTPQRL-STKIKREDSFHEETRISNASHRALLSD 133
SY LC Y ++ LW E L P+RL +RE F E+ + +A HRA +D
Sbjct 80 SYVLC-------YDPRTRGALWVVEQLRPERLRGDGDRRECDFREDDSV-HAYHRATNAD 131
Query 134 YRGSGYDRGHMSPNGDMS-DTKAQQDSFSLANMVPQAPKNNQHIWRELEEATRALVVKQK 192
YRGSG+DRGH++ + KA D+F L+N+ PQ P NQ+ W LE+ +R+L +
Sbjct 132 YRGSGFDRGHLAAAANHRWSQKAMDDTFYLSNVAPQVPHLNQNAWNNLEKYSRSL-TRSY 190
Query 193 QDVFVVTGPVF------EGK---RLKTIGRG-VIVPTAVYKAVYLPKTGA---IGAYYAP 239
Q+V+V TGP+F +GK + + IG+ V VPT +K + L G + Y P
Sbjct 191 QNVYVCTGPLFLPRTEADGKSYVKYQVIGKNHVAVPTHFFKVLILEAAGGQIELRTYVMP 250
Query 240 N 240
N
Sbjct 251 N 251
>P38447 Endonuclease G, mitochondrial [Bos taurus]
Length=299
Score = 95.5 bits (236), Expect = 7e-26
Identities = 66/181 (36%), Positives = 96/181 (53%), Gaps = 24/181 (13%)
Query 75 SYALCFNGFNVMYSGVSKTPLWSAEHLTPQRLSTKIKRED-SFHEETRISNASHRALLSD 133
SY LC Y ++ LW E L P+ L R FHE+ + +A HRA +D
Sbjct 82 SYVLC-------YDPRTRGALWVVEQLRPEGLRGDGNRSSCDFHEDDSV-HAYHRATNAD 133
Query 134 YRGSGYDRGHMSPNGDMS-DTKAQQDSFSLANMVPQAPKNNQHIWRELEEATRALVVKQK 192
YRGSG+DRGH++ + KA D+F L+N+ PQ P NQ+ W LE+ +R+L +
Sbjct 134 YRGSGFDRGHLAAAANHRWSQKAMDDTFYLSNVAPQVPHLNQNAWNNLEKYSRSL-TRTY 192
Query 193 QDVFVVTGPVF------EGK---RLKTIGRG-VIVPTAVYKAVYLPKTGA---IGAYYAP 239
Q+V+V TGP+F +GK + + IG+ V VPT +K + L G + +Y P
Sbjct 193 QNVYVCTGPLFLPRTEADGKSYVKYQVIGKNHVAVPTHFFKVLILEAAGGQIELRSYVMP 252
Query 240 N 240
N
Sbjct 253 N 253
>P81203 Nuclease C1 [Cunninghamella echinulata var. echinulata]
Length=252
Score = 92.4 bits (228), Expect = 4e-25
Identities = 75/224 (33%), Positives = 109/224 (49%), Gaps = 29/224 (13%)
Query 64 PVLVKGSLQSNSYALCFNGFNVMYSGVSKTPLWSAEHLTPQRLSTK--IKREDSFHEETR 121
P + L+ SY + +N + + S W+ EHLT L T + R+ S +E
Sbjct 13 PGTARDFLERESYVISYNRRDRVAS-------WTGEHLTADSLKTGDGVDRDHSKFKEDP 65
Query 122 ISNASHRALLSDYRGSGYDRGHMSPNGDMSDTK-AQQDSFSLANMVPQAPKN-NQHIWRE 179
+ R+ L+DY GSG+DRGHM+P GD T+ A +F L+NM PQ N+H W
Sbjct 66 DVPSLFRSTLADYSGSGFDRGHMAPAGDAVATQPAMDQTFYLSNMSPQVGIGFNRHYWAY 125
Query 180 LEEATRALVVKQKQDVFVVTGPVF------EGKRLKT---IGRGVIVPTAVYKAVYLPKT 230
LE R+L K+ DV+V TGP+F +GK T + V VPT YK + +P+
Sbjct 126 LEGFCRSL-TKKFSDVYVFTGPLFLPTKGSDGKYTVTYNVLQGNVAVPTHFYKVILVPQG 184
Query 231 G---AIGAYYAPN-----NNSLEVRVVSVCYLEEKLGINLFPQL 266
A GA+ PN L V + +E+ G+ F +L
Sbjct 185 DNKYAYGAFILPNQAIDTKTPLTNFKVKLTDVEKASGLTFFDKL 228
>O08600 Endonuclease G, mitochondrial [Mus musculus]
Length=294
Score = 91.3 bits (225), Expect = 2e-24
Identities = 66/199 (33%), Positives = 99/199 (50%), Gaps = 20/199 (10%)
Query 87 YSGVSKTPLWSAEHLTPQRLSTKIKREDSFHEETRISNASHRALLSDYRGSGYDRGHMSP 146
Y ++ LW E L P+RL R E +A HRA +DYRGSG+DRGH++
Sbjct 82 YDPRTRGALWVLEQLRPERLRGDGDRSACDFREDDSVHAYHRATNADYRGSGFDRGHLAA 141
Query 147 NGDMS-DTKAQQDSFSLANMVPQAPKNNQHIWRELEEATRALVVKQKQDVFVVTGPVF-- 203
+ +A D+F L+N+ PQ P NQ+ W LE +R+L + Q+V+V TGP+F
Sbjct 142 AANHRWSQRAMDDTFYLSNVAPQVPHLNQNAWNNLERYSRSL-TRTYQNVYVCTGPLFLP 200
Query 204 ----EGK---RLKTIGRG-VIVPTAVYKAVYLPKTGA---IGAYYAPN-----NNSLEVR 247
+GK + + IG+ V VPT +K + L G + +Y PN LE
Sbjct 201 RTEADGKSYVKYQVIGKNHVAVPTHFFKVLILEAAGGQIELRSYVMPNAPVDETIPLERF 260
Query 248 VVSVCYLEEKLGINLFPQL 266
+V + +E G+ P +
Sbjct 261 LVPIESIERASGLLFVPNI 279
Score = 18.1 bits (35), Expect = 4.1
Identities = 14/49 (29%), Positives = 18/49 (37%), Gaps = 5/49 (10%)
Query 204 EGKRLKTIGRGVIVPTAVYKAVYLP-----KTGAIGAYYAPNNNSLEVR 247
EGK +GR ++P LP TG + Y P L R
Sbjct 27 EGKAPGLLGRVPLLPVVAADLPALPGGPAGGTGELAKYGLPGVAQLRSR 75
>Q0IH72 Nuclease EXOG, mitochondrial [Xenopus laevis]
Length=358
Score = 88.6 bits (218), Expect = 4e-23
Identities = 82/278 (29%), Positives = 133/278 (48%), Gaps = 40/278 (14%)
Query 87 YSGVSKTPLWSAEHLTPQR-LSTKIKREDSFHEETRISNASHRALLSDYRGSGYDRGHMS 145
Y +TP W EHL+ + + + ++ F + I A DY GSG+ RGHM+
Sbjct 76 YDPAKRTPKWVIEHLSRTKTVGSADRKHCKFKPDPNIPKM-FSATNEDYLGSGWTRGHMA 134
Query 146 PNGDMS-DTKAQQDSFSLANMVPQAPKNNQHIWRELEEATRALVVKQKQDVFVVTGPV-- 202
P GD T+A ++F L+N+VPQ +NN W +E R L K+ +DV+VV+GP+
Sbjct 135 PAGDNKFSTEAMAETFYLSNIVPQNYENNAGFWNRMEMYCRDL-TKRFEDVWVVSGPLEL 193
Query 203 ----FEGKRLKT---IGRG-VIVPTAVYKAVYLPKTG-----AIGAYYAPN-----NNSL 244
+GK+ T IG V VP+ +YK + + + G AIGA+ PN ++ L
Sbjct 194 PTSHEDGKKRVTYEVIGADEVAVPSHLYKVILVREKGSEQPLAIGAFVVPNSPIGFDHQL 253
Query 245 EVRVVSVCYLEEKLGINLFPQLTEQQ--------------KRNVYRLPLTAGQVKPAQPL 290
V + LE+ G+ FPQL + + + ++L + A +V A+ L
Sbjct 254 PEYKVQLEDLEKMSGLLFFPQLDRDKGLKPLCDVDSCRLIQLHEFKLYIAARRVGGARNL 313
Query 291 SYAHWDGESQCAEDIKPEG--IEATQKAFKQQTTESGS 326
E I P+G ++ +K K+ + +SG+
Sbjct 314 QKLERILSELKEEGITPDGYLLDLYEKKRKEFSLKSGT 351
>P38446 Nuclease [Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX
2576)]
Length=274
Score = 84.0 bits (206), Expect = 7e-22
Identities = 67/215 (31%), Positives = 101/215 (47%), Gaps = 24/215 (11%)
Query 71 LQSNSYALCFNGFNVMYSGVSKTPLWSAEHLTPQRLSTKIKREDSFHEETRISNASHRAL 130
L ++Y + N + + Y+ T W A L L +R+D+F + + R
Sbjct 53 LTPDNYLMVKNQYALSYNNSKGTANWVAWQLNSSWLGNA-ERQDNFRPDKTLPAGWVRVT 111
Query 131 LSDYRGSGYDRGHMSPNGDMSDTKAQQD---SFSLANMVPQAPKNNQHIWRELEEATRAL 187
S Y GSGYDRGH++P+ D TK +D +F + NM+PQ P NN++ W LE+ R L
Sbjct 112 PSMYSGSGYDRGHIAPSADR--TKTTEDNAATFLMTNMMPQTPDNNRNTWGNLEDYCREL 169
Query 188 VVKQKQDVFVVTGPVFEGKRLKTIGRGVIVPTAVYKAVYL---PKTGAIG--------AY 236
V Q +++++V GP G K + V VP + +K V + P +G G A
Sbjct 170 -VSQGKELYIVAGP--NGSLGKPLKGKVTVPKSTWKIVVVLDSPGSGLEGITANTRVIAV 226
Query 237 YAPN----NNSLEVRVVSVCYLEEKLGINLFPQLT 267
PN NN VSV LE G + ++
Sbjct 227 NIPNDPELNNDWRAYKVSVDELESLTGYDFLSNVS 261
>Q9Y2C4 Nuclease EXOG, mitochondrial [Homo sapiens]
Length=368
Score = 84.7 bits (208), Expect = 1e-21
Identities = 63/212 (30%), Positives = 102/212 (48%), Gaps = 23/212 (11%)
Query 77 ALCFNGFNVMYSGVSKTPLWSAEHLTPQRLSTKIKREDSFHEETRISNASHRALLSDYRG 136
A C+ + Y + P W EH++ ++ R+ + + A DY G
Sbjct 74 ARCYTNHALSYDQAKRVPRWVLEHISKSKIMGDADRKHCKFKPDPNIPPTFSAFNEDYVG 133
Query 137 SGYDRGHMSPNGDMS-DTKAQQDSFSLANMVPQAPKNNQHIWRELEEATRALVVKQKQDV 195
SG+ RGHM+P G+ +KA ++F L+N+VPQ NN W +E R L ++ +DV
Sbjct 134 SGWSRGHMAPAGNNKFSSKAMAETFYLSNIVPQDFDNNSGYWNRIEMYCREL-TERFEDV 192
Query 196 FVVTGPVF------EGKRL---KTIGR-GVIVPTAVYKAVYLPKTG------AIGAYYAP 239
+VV+GP+ +GK++ + IG V VP+ +YK + ++ A+GA+ P
Sbjct 193 WVVSGPLTLPQTRGDGKKIVSYQVIGEDNVAVPSHLYKVILARRSSVSTEPLALGAFVVP 252
Query 240 N-----NNSLEVRVVSVCYLEEKLGINLFPQL 266
N L VS+ LE+ G+ FP L
Sbjct 253 NEAIGFQPQLTEFQVSLQDLEKLSGLVFFPHL 284
Score = 18.1 bits (35), Expect = 4.2
Identities = 5/8 (63%), Positives = 7/8 (88%), Gaps = 0/8 (0%)
Query 10 SNSSWWNR 17
+NS +WNR
Sbjct 170 NNSGYWNR 177
>P08466 Mitochondrial nuclease [Saccharomyces cerevisiae (strain
ATCC 204508 / S288c)]
Length=329
Score = 84.0 bits (206), Expect = 1e-21
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 29/214 (14%)
Query 87 YSGVSKTPLWSAEHLTPQRLSTK-IKREDSFHEETRISNASHRALLSDYRGSGYDRGHMS 145
Y+ ++ P W EH+TP+ L+ + R++SF +E + R L DY SGYDRGH +
Sbjct 81 YNRQTQNPYWVLEHITPESLAARNADRKNSFFKEDEVIPEKFRGKLRDYFRSGYDRGHQA 140
Query 146 PNGDMS-DTKAQQDSFSLANMVPQAPKN-NQHIWRELEEATRALVVKQKQDVFVVTGPVF 203
P D +A D+F L+NM PQ + N+ W LE R L K K V +VTGP++
Sbjct 141 PAADAKFSQQAMDDTFYLSNMCPQVGEGFNRDYWAHLEYFCRGLTKKYK-SVRIVTGPLY 199
Query 204 EGKR----------LKTIGR--GVIVPTAVYKAVYLP--------KTGAIGAYYAPNNN- 242
K+ + IG + VPT +K + + A+ A+ PN
Sbjct 200 LPKKDPIDNKFRVNYEVIGNPPSIAVPTHFFKLIVAEAPTANPAREDIAVAAFVLPNEPI 259
Query 243 SLEVRV----VSVCYLEEKLGINLFPQLTEQQKR 272
S E ++ V + LE G+ L ++ +K+
Sbjct 260 SNETKLTDFEVPIDALERSTGLELLQKVPPSKKK 293
>Q8C163 Nuclease EXOG, mitochondrial [Mus musculus]
Length=368
Score = 80.1 bits (196), Expect = 4e-20
Identities = 61/211 (29%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query 87 YSGVSKTPLWSAEHLTPQRLSTKIKREDSFHEETRISNASHRALLSDYRGSGYDRGHMSP 146
Y + P W EH++ ++ R+ + ++ AL DY GSG+ RGHM+P
Sbjct 84 YDQAKRVPRWVLEHISKDKIIGDADRKHCKFKPDPSVPSAFSALNEDYIGSGWSRGHMAP 143
Query 147 NGDMS-DTKAQQDSFSLANMVPQAPKNNQHIWRELEEATRALVVKQKQDVFVVTGPV--- 202
G+ ++A ++F L+N+VPQ NN W +E R L ++ +DV++V+GP+
Sbjct 144 AGNNKFSSEAMAETFYLSNIVPQNFDNNSGYWNRIEMYCREL-TERFEDVWIVSGPLTLP 202
Query 203 -FEGKRLKTIGRGVI------VPTAVYKAVYLPKTG------AIGAYYAPN-----NNSL 244
KT+ VI VP+ +YK + ++ A+GA+ PN + L
Sbjct 203 HTRNDGTKTVSYQVIGEDNVAVPSHLYKVILARRSPESTEPLALGAFVVPNKAIGFQSQL 262
Query 245 EVRVVSVCYLEEKLGINLFPQLTEQQK-RNV 274
VS+ LE+ G+ FP+L + RN+
Sbjct 263 SEFQVSLHDLEKMSGLVFFPRLDRSRDIRNI 293
Score = 18.1 bits (35), Expect = 4.2
Identities = 5/8 (63%), Positives = 7/8 (88%), Gaps = 0/8 (0%)
Query 10 SNSSWWNR 17
+NS +WNR
Sbjct 170 NNSGYWNR 177
>P81204 Nuclease [Syncephalastrum racemosum]
Length=320
Score = 74.3 bits (181), Expect = 2e-18
Identities = 65/186 (35%), Positives = 87/186 (47%), Gaps = 30/186 (16%)
Query 81 NGFNVMYSGVSKTPLWSAEHLTPQRLSTK--IKREDS-FHEETRISNASHRALLSDYRGS 137
+G+ + Y+ + W EHLT L + R+ S F E+T I RA L DY S
Sbjct 91 SGYILSYNRRDRLAHWVGEHLTSASLQAGQGVDRDKSNFQEDTDIPEM-FRAHLKDYVSS 149
Query 138 GYDRGHMSPNG-DMSDTKAQQDSFSLANMVPQAPKN-NQHIWRELEEATRALVVKQKQDV 195
GYDRGH +P D+S +A ++F L+NM PQ N+H W LE R L + DV
Sbjct 150 GYDRGHQAPAADDLSSQEAMDETFLLSNMAPQVGVGFNRHYWAYLEGFMRDL-TQNFTDV 208
Query 196 FVVTGPVFEGKRLKTIGR-----------------GVIVPTAVYKAVYLPKTG----AIG 234
+V TGP+F T GR V VPT +K + L T A+G
Sbjct 209 YVYTGPLFLPSAAST-GRKNPAYSIEYPFLGATTPNVPVPTHFFK-IALTTTASSEYALG 266
Query 235 AYYAPN 240
A+ PN
Sbjct 267 AFVLPN 272
Score = 20.4 bits (41), Expect = 0.78
Identities = 8/30 (27%), Positives = 17/30 (57%), Gaps = 1/30 (3%)
Query 293 AHWDGESQCAEDIKP-EGIEATQKAFKQQT 321
AHW GE + ++ +G++ + F++ T
Sbjct 104 AHWVGEHLTSASLQAGQGVDRDKSNFQEDT 133
>Q10480 Nuclease 1, mitochondrial [Schizosaccharomyces pombe (strain
972 / ATCC 24843)]
Length=322
Score = 72.8 bits (177), Expect = 8e-18
Identities = 60/220 (27%), Positives = 103/220 (47%), Gaps = 28/220 (13%)
Query 81 NGFNVMYSGVSKTPLWSAEHLTPQRLSTKI--KREDSFHEETRISNASHRALLSDYRGSG 138
+G+ ++ ++ P ++AE +T + L+ + +R F + I +A L DYRGSG
Sbjct 79 HGYMSVFDRRTRNPFYTAETITQESLNQRKGNRRYSEFVPDDNIPEM-FQAKLGDYRGSG 137
Query 139 YDRGHMSPNGDMS-DTKAQQDSFSLANMVPQAPKN-NQHIWRELEEATRALVVKQKQDVF 196
YDRGH P D +A ++F L+NM PQ N++ W E+ R L K V
Sbjct 138 YDRGHQVPAADCKFSQEAMNETFYLSNMCPQVGDGFNRNYWAYFEDWCRRLTSKY-GSVT 196
Query 197 VVTGPVFEGKR---------LKTIGR--GVIVPTAVYKAVYLPKTG------AIGAYYAP 239
++TGP++ K+ + IG V VPT +K + K+G ++ A+ P
Sbjct 197 IMTGPLYLPKKNERGQWEVQYRVIGNPPNVAVPTHFFKVIIAEKSGEPTSSPSVAAFVLP 256
Query 240 N-----NNSLEVRVVSVCYLEEKLGINLFPQLTEQQKRNV 274
N N L+ V V +E G+ + + + ++ +
Sbjct 257 NKPIADNFPLKNFAVPVEVVERASGLEILSNVPKGNRKQL 296
>Q95NM6 Endonuclease G, mitochondrial [Caenorhabditis elegans]
Length=308
Score = 66.2 bits (160), Expect = 1e-15
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 37/216 (17%)
Query 80 FNGFNVMYSGVSKTPLWSAEHLTPQRLS---------TKIKREDSFHEETRISNASHRAL 130
+ F + Y ++T W EHLTP+RL + K + +F ++ N
Sbjct 83 YEDFVLSYDYKTRTAHWVCEHLTPERLKHAEGVDRKLCEFKPDITFPQKFLSQN------ 136
Query 131 LSDYRGSGYDRGHMSPNGDMSDTK-AQQDSFSLANMVPQAPKN-NQHIWRELEEATRALV 188
+DY+ SG+DRGH++ G+ ++ A +F L+NM PQ + N+ W +LE R V
Sbjct 137 -TDYKCSGFDRGHLAAAGNHRKSQLAVDQTFYLSNMSPQVGRGFNRDKWNDLEMHCRR-V 194
Query 189 VKQKQDVFVVTGPVF------EGK---RLKTIG-RGVIVPTAVYKAVYL---PKTGAIGA 235
K+ + +++TGP++ +GK + + IG V VPT +K P + +
Sbjct 195 AKKMINSYIITGPLYLPKLEGDGKKYIKYQVIGDNNVAVPTHFFKVALFEVTPGKFELES 254
Query 236 YYAPN---NNSLEVRV--VSVCYLEEKLGINLFPQL 266
Y PN +++E+ V + +E G+ +F +L
Sbjct 255 YILPNAVIEDTVEISKFHVPLDAVERSAGLEIFARL 290
Lambda K H a alpha
0.317 0.131 0.388 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1106142
Database: 14f65d57e910d855c86175cf20b67d2f.SwissProt.fasta
Posted date: May 20, 2024 7:44 AM
Number of letters in database: 4,132
Number of sequences in database: 13
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40