BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: e66461334e7c66ba2d2e75a74affce16.TrEMBL.fasta
11 sequences; 2,301 total letters
Query= ACIAD3402
Length=209
Score E
Sequences producing significant alignments: (Bits) Value
Q6F7A1 Putative cold shock protein [Acinetobacter baylyi (strain ... 429 2e-159
A0A7G2SIB8 DUF1294 domain-containing protein [Acinetobacter sp] 429 2e-159
A0A3D2SPA6 DUF1294 domain-containing protein [Acinetobacter ursin... 334 5e-122
N9C580 CSD domain-containing protein [Acinetobacter ursingii ANC ... 333 1e-121
A0A009ZL84 'Cold-shock' DNA-binding domain protein [Acinetobacter... 333 2e-121
A0A7T9UL24 Cold shock and DUF1294 domain-containing protein [Acin... 333 2e-121
A0A427PRU0 DUF1294 domain-containing protein [Acinetobacter sp. F... 332 3e-121
A0A3A8EUB8 DUF1294 domain-containing protein [Acinetobacter guerrae] 327 5e-119
A0A427LWQ5 DUF1294 domain-containing protein [Acinetobacter soli] 318 2e-115
A0A0M1HYL4 Cold-shock protein [Acinetobacter sp. C15] 317 3e-115
A0A1P8EKE6 Cold-shock protein [Acinetobacter soli] 317 3e-115
>Q6F7A1 Putative cold shock protein [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=208
Score = 429 bits (1102), Expect = 2e-159
Identities = 208/208 (100%), Positives = 208/208 (100%), Gaps = 0/208 (0%)
Query 1 MRDQGRLVEWFDDKGYGFIQPNDSQKGRVFLHIRDFARKGPRPIVGCALEYLVILDEQGR 60
MRDQGRLVEWFDDKGYGFIQPNDSQKGRVFLHIRDFARKGPRPIVGCALEYLVILDEQGR
Sbjct 1 MRDQGRLVEWFDDKGYGFIQPNDSQKGRVFLHIRDFARKGPRPIVGCALEYLVILDEQGR 60
Query 61 HRAIQVVYLKAQQARPTQPKNNVNKPNQPSTLAPMQIACVLYILAIAVLSWMHVLPSYSF 120
HRAIQVVYLKAQQARPTQPKNNVNKPNQPSTLAPMQIACVLYILAIAVLSWMHVLPSYSF
Sbjct 61 HRAIQVVYLKAQQARPTQPKNNVNKPNQPSTLAPMQIACVLYILAIAVLSWMHVLPSYSF 120
Query 121 IFIALMNALSYWLYAQDKEAAQLGNRRVPEQSLHIVAFLGGWPAAWLAQQKLRHKTQKQP 180
IFIALMNALSYWLYAQDKEAAQLGNRRVPEQSLHIVAFLGGWPAAWLAQQKLRHKTQKQP
Sbjct 121 IFIALMNALSYWLYAQDKEAAQLGNRRVPEQSLHIVAFLGGWPAAWLAQQKLRHKTQKQP 180
Query 181 FRKIYFCTIVLNILLLLWFISPLNVILH 208
FRKIYFCTIVLNILLLLWFISPLNVILH
Sbjct 181 FRKIYFCTIVLNILLLLWFISPLNVILH 208
>A0A7G2SIB8 DUF1294 domain-containing protein [Acinetobacter sp]
Length=208
Score = 429 bits (1102), Expect = 2e-159
Identities = 208/208 (100%), Positives = 208/208 (100%), Gaps = 0/208 (0%)
Query 1 MRDQGRLVEWFDDKGYGFIQPNDSQKGRVFLHIRDFARKGPRPIVGCALEYLVILDEQGR 60
MRDQGRLVEWFDDKGYGFIQPNDSQKGRVFLHIRDFARKGPRPIVGCALEYLVILDEQGR
Sbjct 1 MRDQGRLVEWFDDKGYGFIQPNDSQKGRVFLHIRDFARKGPRPIVGCALEYLVILDEQGR 60
Query 61 HRAIQVVYLKAQQARPTQPKNNVNKPNQPSTLAPMQIACVLYILAIAVLSWMHVLPSYSF 120
HRAIQVVYLKAQQARPTQPKNNVNKPNQPSTLAPMQIACVLYILAIAVLSWMHVLPSYSF
Sbjct 61 HRAIQVVYLKAQQARPTQPKNNVNKPNQPSTLAPMQIACVLYILAIAVLSWMHVLPSYSF 120
Query 121 IFIALMNALSYWLYAQDKEAAQLGNRRVPEQSLHIVAFLGGWPAAWLAQQKLRHKTQKQP 180
IFIALMNALSYWLYAQDKEAAQLGNRRVPEQSLHIVAFLGGWPAAWLAQQKLRHKTQKQP
Sbjct 121 IFIALMNALSYWLYAQDKEAAQLGNRRVPEQSLHIVAFLGGWPAAWLAQQKLRHKTQKQP 180
Query 181 FRKIYFCTIVLNILLLLWFISPLNVILH 208
FRKIYFCTIVLNILLLLWFISPLNVILH
Sbjct 181 FRKIYFCTIVLNILLLLWFISPLNVILH 208
>A0A3D2SPA6 DUF1294 domain-containing protein [Acinetobacter ursingii]
Length=210
Score = 334 bits (857), Expect = 5e-122
Identities = 163/209 (78%), Positives = 186/209 (89%), Gaps = 3/209 (1%)
Query 1 MRDQGRLVEWFDDKGYGFIQPNDSQKGRVFLHIRDFARKGPRPIVGCALEYLVILDEQGR 60
MRDQGRL+EWFD+KGYGFIQPND+ K RVFLHI+DFAR GPRPIVGCALEYLVILDE+GR
Sbjct 2 MRDQGRLIEWFDEKGYGFIQPNDADKDRVFLHIKDFARSGPRPIVGCALEYLVILDERGR 61
Query 61 HRAIQVVYLKAQQARP--TQPKNNVNKPNQPSTLAPMQIACVLYILAIAVLSWMHVLPSY 118
+RA QV+YLKA Q R K +V+ + S+L PMQIA V+YI+ +A+LS++H+LP+Y
Sbjct 62 YRAKQVIYLKAAQTRALAANKKRSVSTA-RTSSLKPMQIAAVVYIVIVAILSFIHLLPAY 120
Query 119 SFIFIALMNALSYWLYAQDKEAAQLGNRRVPEQSLHIVAFLGGWPAAWLAQQKLRHKTQK 178
SFIFIALMN LSYWLYAQDKEAAQLGNRRVPEQ+LHI++FLGGWPAA LAQQKLRHKTQK
Sbjct 121 SFIFIALMNVLSYWLYAQDKEAAQLGNRRVPEQTLHIISFLGGWPAAGLAQQKLRHKTQK 180
Query 179 QPFRKIYFCTIVLNILLLLWFISPLNVIL 207
QPFRKIYFCTIVLNILLLLW ISPLNV+L
Sbjct 181 QPFRKIYFCTIVLNILLLLWLISPLNVVL 209
>N9C580 CSD domain-containing protein [Acinetobacter ursingii
ANC 3649]
Length=210
Score = 333 bits (854), Expect = 1e-121
Identities = 162/208 (78%), Positives = 183/208 (88%), Gaps = 1/208 (0%)
Query 1 MRDQGRLVEWFDDKGYGFIQPNDSQKGRVFLHIRDFARKGPRPIVGCALEYLVILDEQGR 60
MRDQGRL+EWFD+KGYGFIQPND+ K RVFLHI+DFAR GPRPIVGCALEYLVILDE+GR
Sbjct 2 MRDQGRLIEWFDEKGYGFIQPNDADKDRVFLHIKDFARSGPRPIVGCALEYLVILDERGR 61
Query 61 HRAIQVVYLKAQQARPTQP-KNNVNKPNQPSTLAPMQIACVLYILAIAVLSWMHVLPSYS 119
+RA QV+YLKA Q R K + S+L PMQIA V+YI+ +A+LS++H+LP+YS
Sbjct 62 YRAKQVIYLKAAQTRALAANKKRPVSTARASSLKPMQIAAVVYIVIVALLSFIHLLPAYS 121
Query 120 FIFIALMNALSYWLYAQDKEAAQLGNRRVPEQSLHIVAFLGGWPAAWLAQQKLRHKTQKQ 179
FIFIALMN LSYWLYAQDKEAAQLGNRRVPEQ+LHI++FLGGWPAA LAQQKLRHKTQKQ
Sbjct 122 FIFIALMNVLSYWLYAQDKEAAQLGNRRVPEQTLHIISFLGGWPAAGLAQQKLRHKTQKQ 181
Query 180 PFRKIYFCTIVLNILLLLWFISPLNVIL 207
PFRKIYFCTIVLNILLLLW ISPLNV+L
Sbjct 182 PFRKIYFCTIVLNILLLLWLISPLNVVL 209
>A0A009ZL84 'Cold-shock' DNA-binding domain protein [Acinetobacter
sp. 479375]
Length=209
Score = 333 bits (853), Expect = 2e-121
Identities = 162/209 (78%), Positives = 186/209 (89%), Gaps = 3/209 (1%)
Query 1 MRDQGRLVEWFDDKGYGFIQPNDSQKGRVFLHIRDFARKGPRPIVGCALEYLVILDEQGR 60
MRDQGRL+EWFD+KGYGFIQPND+ K RVFLHI+DFAR GPRPIVGCALEYLVILDE+GR
Sbjct 1 MRDQGRLIEWFDEKGYGFIQPNDADKDRVFLHIKDFARSGPRPIVGCALEYLVILDERGR 60
Query 61 HRAIQVVYLKAQQARP--TQPKNNVNKPNQPSTLAPMQIACVLYILAIAVLSWMHVLPSY 118
+RA QV+YLKA Q R K +V+ + S+L PMQIA V+YI+ +A+LS++H+LP+Y
Sbjct 61 YRAKQVIYLKAAQTRALAANKKRSVSTA-RTSSLKPMQIAAVVYIVIVALLSFIHLLPAY 119
Query 119 SFIFIALMNALSYWLYAQDKEAAQLGNRRVPEQSLHIVAFLGGWPAAWLAQQKLRHKTQK 178
SFIFIALMN LSYWLYAQDKEAAQLGNRRVPEQ+LHI++FLGGWPAA LAQQKLRHKTQK
Sbjct 120 SFIFIALMNVLSYWLYAQDKEAAQLGNRRVPEQTLHIISFLGGWPAAGLAQQKLRHKTQK 179
Query 179 QPFRKIYFCTIVLNILLLLWFISPLNVIL 207
QPFRKIYFCTIVLNILLL+W ISPLNV+L
Sbjct 180 QPFRKIYFCTIVLNILLLIWLISPLNVVL 208
>A0A7T9UL24 Cold shock and DUF1294 domain-containing protein [Acinetobacter
ursingii]
Length=209
Score = 333 bits (853), Expect = 2e-121
Identities = 162/209 (78%), Positives = 186/209 (89%), Gaps = 3/209 (1%)
Query 1 MRDQGRLVEWFDDKGYGFIQPNDSQKGRVFLHIRDFARKGPRPIVGCALEYLVILDEQGR 60
MRDQGRL+EWFD+KGYGFIQPND+ K RVFLHI+DFAR GPRPIVGCALEYLVILDE+GR
Sbjct 1 MRDQGRLIEWFDEKGYGFIQPNDADKDRVFLHIKDFARSGPRPIVGCALEYLVILDERGR 60
Query 61 HRAIQVVYLKAQQARP--TQPKNNVNKPNQPSTLAPMQIACVLYILAIAVLSWMHVLPSY 118
+RA QV+YLKA Q R K +V+ + S+L PMQIA V+YI+ +A+LS++H+LP+Y
Sbjct 61 YRAKQVIYLKAAQTRALAANKKRSVSTAHT-SSLKPMQIAAVVYIVIVALLSFIHLLPAY 119
Query 119 SFIFIALMNALSYWLYAQDKEAAQLGNRRVPEQSLHIVAFLGGWPAAWLAQQKLRHKTQK 178
SFIFIALMN LSYWLYAQDKEAAQLGNRRVPEQ+LHI++FLGGWPAA LAQQKLRHKTQK
Sbjct 120 SFIFIALMNVLSYWLYAQDKEAAQLGNRRVPEQTLHIISFLGGWPAAGLAQQKLRHKTQK 179
Query 179 QPFRKIYFCTIVLNILLLLWFISPLNVIL 207
QPFRKIYFCTIVLNILLL+W ISPLNV+L
Sbjct 180 QPFRKIYFCTIVLNILLLIWLISPLNVVL 208
>A0A427PRU0 DUF1294 domain-containing protein [Acinetobacter sp.
FDAARGOS_515]
Length=210
Score = 332 bits (852), Expect = 3e-121
Identities = 161/208 (77%), Positives = 182/208 (88%), Gaps = 1/208 (0%)
Query 1 MRDQGRLVEWFDDKGYGFIQPNDSQKGRVFLHIRDFARKGPRPIVGCALEYLVILDEQGR 60
MRDQGRL+EWFD+KGYGFIQPND+ K RVFLHI+DFAR GPRPIVGCALEYLVILDE+GR
Sbjct 2 MRDQGRLIEWFDEKGYGFIQPNDADKDRVFLHIKDFARSGPRPIVGCALEYLVILDERGR 61
Query 61 HRAIQVVYLKAQQARPTQP-KNNVNKPNQPSTLAPMQIACVLYILAIAVLSWMHVLPSYS 119
+RA QV+YLKA Q R K S+L PMQIA ++YI+ +A+LS++H+LP+YS
Sbjct 62 YRAKQVIYLKAAQTRALAANKKRPVSTAHTSSLKPMQIAALVYIVIVAILSFIHLLPAYS 121
Query 120 FIFIALMNALSYWLYAQDKEAAQLGNRRVPEQSLHIVAFLGGWPAAWLAQQKLRHKTQKQ 179
FIFIALMN LSYWLYAQDKEAAQLGNRRVPEQ+LHI++FLGGWPAA LAQQKLRHKTQKQ
Sbjct 122 FIFIALMNVLSYWLYAQDKEAAQLGNRRVPEQTLHIISFLGGWPAAGLAQQKLRHKTQKQ 181
Query 180 PFRKIYFCTIVLNILLLLWFISPLNVIL 207
PFRKIYFCTIVLNILLLLW ISPLNV+L
Sbjct 182 PFRKIYFCTIVLNILLLLWLISPLNVVL 209
>A0A3A8EUB8 DUF1294 domain-containing protein [Acinetobacter guerrae]
Length=210
Score = 327 bits (837), Expect = 5e-119
Identities = 159/208 (76%), Positives = 179/208 (86%), Gaps = 1/208 (0%)
Query 1 MRDQGRLVEWFDDKGYGFIQPNDSQKGRVFLHIRDFARKGPRPIVGCALEYLVILDEQGR 60
MRDQGRL+EWFD+KGYGFIQPND+ K VFLHI+DFAR GPRPIVGCALEY VILDE+GR
Sbjct 2 MRDQGRLIEWFDEKGYGFIQPNDADKDPVFLHIKDFARAGPRPIVGCALEYEVILDERGR 61
Query 61 HRAIQVVYLKAQQARPTQPKNNVNKPN-QPSTLAPMQIACVLYILAIAVLSWMHVLPSYS 119
+RA QV+YLKA Q R N S+L PMQIA +YI+ +A+LS++HVLP+YS
Sbjct 62 YRAKQVIYLKAAQTRALAANKKRPVSNAHTSSLKPMQIAAAVYIVIVAILSFIHVLPAYS 121
Query 120 FIFIALMNALSYWLYAQDKEAAQLGNRRVPEQSLHIVAFLGGWPAAWLAQQKLRHKTQKQ 179
FIFIALMN LSYWLYAQDKEAAQLGNRRVPEQ+LH+++FLGGWPAA LAQQKLRHKTQKQ
Sbjct 122 FIFIALMNVLSYWLYAQDKEAAQLGNRRVPEQTLHVISFLGGWPAAGLAQQKLRHKTQKQ 181
Query 180 PFRKIYFCTIVLNILLLLWFISPLNVIL 207
PFRKIYFCTIVLNILLLLW ISPLNV+L
Sbjct 182 PFRKIYFCTIVLNILLLLWLISPLNVML 209
>A0A427LWQ5 DUF1294 domain-containing protein [Acinetobacter soli]
Length=209
Score = 318 bits (814), Expect = 2e-115
Identities = 153/209 (73%), Positives = 176/209 (84%), Gaps = 1/209 (0%)
Query 1 MRDQGRLVEWFDDKGYGFIQPNDSQKGRVFLHIRDFARKGPRPIVGCALEYLVILDEQGR 60
MRDQGRLVEWFD+KGYGFIQP+D K RVFLHI DFARKGPRP+VGCAL+Y+VILDEQGR
Sbjct 1 MRDQGRLVEWFDEKGYGFIQPDDMNKERVFLHISDFARKGPRPLVGCALDYVVILDEQGR 60
Query 61 HRAIQVVYLKAQQAR-PTQPKNNVNKPNQPSTLAPMQIACVLYILAIAVLSWMHVLPSYS 119
RA QVVY+KA+ +R P++ K P L PMQ+A VLYI+ +AVLS+ +LP +S
Sbjct 61 FRAKQVVYVKAKNSRAPSRSKTPSVVPAARPALVPMQLAAVLYIVVVAVLSFSKLLPPFS 120
Query 120 FIFIALMNALSYWLYAQDKEAAQLGNRRVPEQSLHIVAFLGGWPAAWLAQQKLRHKTQKQ 179
FIFI LMN LSYWLYAQDKEAAQ G RR+ E +LH+VAFLGGWPAAWLAQQKLRHKTQKQ
Sbjct 121 FIFITLMNVLSYWLYAQDKEAAQNGTRRIAESTLHVVAFLGGWPAAWLAQQKLRHKTQKQ 180
Query 180 PFRKIYFCTIVLNILLLLWFISPLNVILH 208
PFRKIYFCTI LNI+LLLW +SPLNV++H
Sbjct 181 PFRKIYFCTIGLNIILLLWLVSPLNVLIH 209
>A0A0M1HYL4 Cold-shock protein [Acinetobacter sp. C15]
Length=209
Score = 317 bits (812), Expect = 3e-115
Identities = 153/209 (73%), Positives = 176/209 (84%), Gaps = 1/209 (0%)
Query 1 MRDQGRLVEWFDDKGYGFIQPNDSQKGRVFLHIRDFARKGPRPIVGCALEYLVILDEQGR 60
MRDQGRLVEWFD+KGYGFIQP+D K RVFLHI DFARKGPRP+VGCAL+Y+VILDEQGR
Sbjct 1 MRDQGRLVEWFDEKGYGFIQPDDMNKERVFLHISDFARKGPRPLVGCALDYVVILDEQGR 60
Query 61 HRAIQVVYLKAQQAR-PTQPKNNVNKPNQPSTLAPMQIACVLYILAIAVLSWMHVLPSYS 119
RA QVVY+KA+ +R P++ K P L PMQ+A VLYI+ +AVLS+ +LP +S
Sbjct 61 FRAKQVVYVKARNSRAPSRSKAPSVVPAARPALVPMQLAAVLYIVVVAVLSFSKLLPPFS 120
Query 120 FIFIALMNALSYWLYAQDKEAAQLGNRRVPEQSLHIVAFLGGWPAAWLAQQKLRHKTQKQ 179
FIFI LMN LSYWLYAQDKEAAQ G RR+ E +LH+VAFLGGWPAAWLAQQKLRHKTQKQ
Sbjct 121 FIFITLMNVLSYWLYAQDKEAAQNGTRRIAESTLHVVAFLGGWPAAWLAQQKLRHKTQKQ 180
Query 180 PFRKIYFCTIVLNILLLLWFISPLNVILH 208
PFRKIYFCTI LNI+LLLW +SPLNV++H
Sbjct 181 PFRKIYFCTIGLNIILLLWLVSPLNVLIH 209
>A0A1P8EKE6 Cold-shock protein [Acinetobacter soli]
Length=209
Score = 317 bits (812), Expect = 3e-115
Identities = 153/209 (73%), Positives = 176/209 (84%), Gaps = 1/209 (0%)
Query 1 MRDQGRLVEWFDDKGYGFIQPNDSQKGRVFLHIRDFARKGPRPIVGCALEYLVILDEQGR 60
MRDQGRLVEWFD+KGYGFIQP+D K RVFLHI DFARKGPRP+VGCAL+Y+VILDEQGR
Sbjct 1 MRDQGRLVEWFDEKGYGFIQPDDMNKERVFLHISDFARKGPRPLVGCALDYVVILDEQGR 60
Query 61 HRAIQVVYLKAQQAR-PTQPKNNVNKPNQPSTLAPMQIACVLYILAIAVLSWMHVLPSYS 119
RA QVVY+KA+ +R P++ K P L PMQ+A VLYI+ +AVLS+ +LP +S
Sbjct 61 FRAKQVVYVKAKNSRAPSRSKAPSVVPAARPALVPMQLAAVLYIVVVAVLSFSKLLPPFS 120
Query 120 FIFIALMNALSYWLYAQDKEAAQLGNRRVPEQSLHIVAFLGGWPAAWLAQQKLRHKTQKQ 179
FIFI LMN LSYWLYAQDKEAAQ G RR+ E +LH+VAFLGGWPAAWLAQQKLRHKTQKQ
Sbjct 121 FIFITLMNVLSYWLYAQDKEAAQNGTRRIAESTLHVVAFLGGWPAAWLAQQKLRHKTQKQ 180
Query 180 PFRKIYFCTIVLNILLLLWFISPLNVILH 208
PFRKIYFCTI LNI+LLLW +SPLNV++H
Sbjct 181 PFRKIYFCTIGLNIILLLWLVSPLNVLIH 209
Lambda K H a alpha
0.330 0.142 0.460 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 325768
Database: e66461334e7c66ba2d2e75a74affce16.TrEMBL.fasta
Posted date: Jun 1, 2024 3:46 AM
Number of letters in database: 2,301
Number of sequences in database: 11
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
