BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: abcb9a3dde7ad0958c4595bbabaecf87.SwissProt.fasta
17 sequences; 9,683 total letters
Query= ACIAD3380
Length=554
Score E
Sequences producing significant alignments: (Bits) Value
P0A9W5 Energy-dependent translational throttle protein EttA [Shig... 805 0.0
P0A9W4 Energy-dependent translational throttle protein EttA [Esch... 805 0.0
P0A9W3 Energy-dependent translational throttle protein EttA [Esch... 805 0.0
A0A0H2VFI8 Energy-dependent translational throttle protein EttA [... 802 0.0
P45127 Energy-dependent translational throttle protein EttA [Haem... 797 0.0
P9WQK2 Energy-dependent translational throttle protein EttA [Myco... 588 0.0
P9WQK3 Energy-dependent translational throttle protein EttA [Myco... 588 0.0
O06476 Uncharacterized ABC transporter ATP-binding protein YfmR [... 336 3e-111
P12622 ATP-binding protein ChvD [Rhizobium radiobacter] 322 3e-110
Q57242 ATP-binding protein Uup [Haemophilus influenzae (strain AT... 329 3e-108
P43672 ATP-binding protein Uup [Escherichia coli (strain K12)] 301 1e-97
O05519 Putative ATP-binding protein YdiF [Bacillus subtilis (stra... 292 3e-94
Q9LV93 ABC transporter F family member 5 [Arabidopsis thaliana] 281 2e-89
Q8K9I3 ATP-binding protein Uup [Buchnera aphidicola subsp. Schiza... 267 5e-85
Q45978 ATP-binding protein Uup [Caulobacter vibrioides (strain AT... 250 2e-78
P0A9U3 Probable ATP-binding protein YbiT [Escherichia coli (strai... 247 4e-78
P0A9U4 Probable ATP-binding protein YbiT [Escherichia coli O6:H1 ... 247 4e-78
>P0A9W5 Energy-dependent translational throttle protein EttA [Shigella
flexneri]
Length=555
Score = 805 bits (2078), Expect = 0.0
Identities = 393/553 (71%), Positives = 474/553 (86%), Gaps = 2/553 (0%)
Query 1 VAQYIYTMNRVSKMVPPKREILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFS 60
+AQ++YTM+RV K+VPPKR ILK+ISLSFFPGAKIGVLGLNGAGKSTLLRIMAG+DKD
Sbjct 1 MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIE 60
Query 61 GEARAQPGIKIGYLEQEPPLDPNKDVRGNVEDGVREALDALERLDQVFAEYADPDADFDK 120
GEAR QP IKIGYL QEP L+P VR ++E+ V E ++AL+RLD+V+A YADPDADFDK
Sbjct 61 GEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDK 120
Query 121 LAKEQEKLEAIIQTWDAHNLNNQLEIAANALNLPAWDSDVSLLSGGERRRVALCRLLLSK 180
LA EQ +LE IIQ D HNLN QLE AA+AL LP WD+ ++ LSGGERRRVALCRLLL K
Sbjct 121 LAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEK 180
Query 181 PDMLLLDEPTNHLDAESVSWLERFLKDFPGTIVAITHDRYFLDNVAEWILELDRGMGIPY 240
PDMLLLDEPTNHLDAESV+WLERFL DF GT+VAITHDRYFLDNVA WILELDRG GIP+
Sbjct 181 PDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPW 240
Query 241 QGNYSSWLEQKNARLEQEQKQEESFAKALKKELEWVRSNAKGQQKKNKARMERFEELNSK 300
+GNYSSWLEQK+ RL QE QE + K+++KELEWVR KG+Q K KAR+ RFEELNS
Sbjct 241 EGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGTKGRQSKGKARLARFEELNST 300
Query 301 EFQQRNETSEIYIPPGPRLGNKVVEVEGISKSFDGRLLYKDLTFTVPPTAIVGIVGPNGA 360
E+Q+RNET+E++IPPGPRLG+KV+EV + KS+ RLL DL+F++P AIVGI+GPNGA
Sbjct 301 EYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGA 360
Query 361 GKTTLFRMMTGEQQPDTGTVTLGESVKVAYVGQIRDTLDNNKTVWEEVSGGLDILRIGDY 420
GK+TLFRM++G++QPD+GT+TLGE+VK+A V Q RD++DN+KTVWEEVSGGLDI++IG+
Sbjct 361 GKSTLFRMISGQEQPDSGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKIGNT 420
Query 421 EIASRAYIGRFNFKGQDQQKRVGELSGGERNRLQLAKILQLGANVILLDEPSNDLDIETL 480
E+ SRAY+GRFNFKG DQ KRVGELSGGER RL LAK+LQ+G N++LLDEP+NDLDIETL
Sbjct 421 EMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETL 480
Query 481 RALEDAILVFPGTVMVVSHDRWFLDRIATHILSFENE-QPEFYEGNYAEYEAYRQSRLGD 539
RALE+A+L FPG MV+SHDRWFLDRIATHIL +++E + EF+EGN+ EYE Y++ LG
Sbjct 481 RALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGA 540
Query 540 DAVQ-KRSKYKKI 551
DA++ KR KYK+I
Sbjct 541 DALEPKRIKYKRI 553
>P0A9W4 Energy-dependent translational throttle protein EttA [Escherichia
coli O157:H7]
Length=555
Score = 805 bits (2078), Expect = 0.0
Identities = 393/553 (71%), Positives = 474/553 (86%), Gaps = 2/553 (0%)
Query 1 VAQYIYTMNRVSKMVPPKREILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFS 60
+AQ++YTM+RV K+VPPKR ILK+ISLSFFPGAKIGVLGLNGAGKSTLLRIMAG+DKD
Sbjct 1 MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIE 60
Query 61 GEARAQPGIKIGYLEQEPPLDPNKDVRGNVEDGVREALDALERLDQVFAEYADPDADFDK 120
GEAR QP IKIGYL QEP L+P VR ++E+ V E ++AL+RLD+V+A YADPDADFDK
Sbjct 61 GEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDK 120
Query 121 LAKEQEKLEAIIQTWDAHNLNNQLEIAANALNLPAWDSDVSLLSGGERRRVALCRLLLSK 180
LA EQ +LE IIQ D HNLN QLE AA+AL LP WD+ ++ LSGGERRRVALCRLLL K
Sbjct 121 LAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEK 180
Query 181 PDMLLLDEPTNHLDAESVSWLERFLKDFPGTIVAITHDRYFLDNVAEWILELDRGMGIPY 240
PDMLLLDEPTNHLDAESV+WLERFL DF GT+VAITHDRYFLDNVA WILELDRG GIP+
Sbjct 181 PDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPW 240
Query 241 QGNYSSWLEQKNARLEQEQKQEESFAKALKKELEWVRSNAKGQQKKNKARMERFEELNSK 300
+GNYSSWLEQK+ RL QE QE + K+++KELEWVR KG+Q K KAR+ RFEELNS
Sbjct 241 EGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGTKGRQSKGKARLARFEELNST 300
Query 301 EFQQRNETSEIYIPPGPRLGNKVVEVEGISKSFDGRLLYKDLTFTVPPTAIVGIVGPNGA 360
E+Q+RNET+E++IPPGPRLG+KV+EV + KS+ RLL DL+F++P AIVGI+GPNGA
Sbjct 301 EYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGA 360
Query 361 GKTTLFRMMTGEQQPDTGTVTLGESVKVAYVGQIRDTLDNNKTVWEEVSGGLDILRIGDY 420
GK+TLFRM++G++QPD+GT+TLGE+VK+A V Q RD++DN+KTVWEEVSGGLDI++IG+
Sbjct 361 GKSTLFRMISGQEQPDSGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKIGNT 420
Query 421 EIASRAYIGRFNFKGQDQQKRVGELSGGERNRLQLAKILQLGANVILLDEPSNDLDIETL 480
E+ SRAY+GRFNFKG DQ KRVGELSGGER RL LAK+LQ+G N++LLDEP+NDLDIETL
Sbjct 421 EMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETL 480
Query 481 RALEDAILVFPGTVMVVSHDRWFLDRIATHILSFENE-QPEFYEGNYAEYEAYRQSRLGD 539
RALE+A+L FPG MV+SHDRWFLDRIATHIL +++E + EF+EGN+ EYE Y++ LG
Sbjct 481 RALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGA 540
Query 540 DAVQ-KRSKYKKI 551
DA++ KR KYK+I
Sbjct 541 DALEPKRIKYKRI 553
>P0A9W3 Energy-dependent translational throttle protein EttA [Escherichia
coli (strain K12)]
Length=555
Score = 805 bits (2078), Expect = 0.0
Identities = 393/553 (71%), Positives = 474/553 (86%), Gaps = 2/553 (0%)
Query 1 VAQYIYTMNRVSKMVPPKREILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFS 60
+AQ++YTM+RV K+VPPKR ILK+ISLSFFPGAKIGVLGLNGAGKSTLLRIMAG+DKD
Sbjct 1 MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIE 60
Query 61 GEARAQPGIKIGYLEQEPPLDPNKDVRGNVEDGVREALDALERLDQVFAEYADPDADFDK 120
GEAR QP IKIGYL QEP L+P VR ++E+ V E ++AL+RLD+V+A YADPDADFDK
Sbjct 61 GEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDK 120
Query 121 LAKEQEKLEAIIQTWDAHNLNNQLEIAANALNLPAWDSDVSLLSGGERRRVALCRLLLSK 180
LA EQ +LE IIQ D HNLN QLE AA+AL LP WD+ ++ LSGGERRRVALCRLLL K
Sbjct 121 LAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEK 180
Query 181 PDMLLLDEPTNHLDAESVSWLERFLKDFPGTIVAITHDRYFLDNVAEWILELDRGMGIPY 240
PDMLLLDEPTNHLDAESV+WLERFL DF GT+VAITHDRYFLDNVA WILELDRG GIP+
Sbjct 181 PDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPW 240
Query 241 QGNYSSWLEQKNARLEQEQKQEESFAKALKKELEWVRSNAKGQQKKNKARMERFEELNSK 300
+GNYSSWLEQK+ RL QE QE + K+++KELEWVR KG+Q K KAR+ RFEELNS
Sbjct 241 EGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGTKGRQSKGKARLARFEELNST 300
Query 301 EFQQRNETSEIYIPPGPRLGNKVVEVEGISKSFDGRLLYKDLTFTVPPTAIVGIVGPNGA 360
E+Q+RNET+E++IPPGPRLG+KV+EV + KS+ RLL DL+F++P AIVGI+GPNGA
Sbjct 301 EYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGA 360
Query 361 GKTTLFRMMTGEQQPDTGTVTLGESVKVAYVGQIRDTLDNNKTVWEEVSGGLDILRIGDY 420
GK+TLFRM++G++QPD+GT+TLGE+VK+A V Q RD++DN+KTVWEEVSGGLDI++IG+
Sbjct 361 GKSTLFRMISGQEQPDSGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKIGNT 420
Query 421 EIASRAYIGRFNFKGQDQQKRVGELSGGERNRLQLAKILQLGANVILLDEPSNDLDIETL 480
E+ SRAY+GRFNFKG DQ KRVGELSGGER RL LAK+LQ+G N++LLDEP+NDLDIETL
Sbjct 421 EMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETL 480
Query 481 RALEDAILVFPGTVMVVSHDRWFLDRIATHILSFENE-QPEFYEGNYAEYEAYRQSRLGD 539
RALE+A+L FPG MV+SHDRWFLDRIATHIL +++E + EF+EGN+ EYE Y++ LG
Sbjct 481 RALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGA 540
Query 540 DAVQ-KRSKYKKI 551
DA++ KR KYK+I
Sbjct 541 DALEPKRIKYKRI 553
>A0A0H2VFI8 Energy-dependent translational throttle protein EttA
[Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=555
Score = 802 bits (2072), Expect = 0.0
Identities = 392/553 (71%), Positives = 473/553 (86%), Gaps = 2/553 (0%)
Query 1 VAQYIYTMNRVSKMVPPKREILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFS 60
+AQ++YTM+RV K+VPPKR ILK+ISLSFFPGAKIGVLGLNGAGKSTLLRIMAG+DKD
Sbjct 1 MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIE 60
Query 61 GEARAQPGIKIGYLEQEPPLDPNKDVRGNVEDGVREALDALERLDQVFAEYADPDADFDK 120
GEAR QP IKIGYL QEP L+P VR ++E+ V E ++AL+RLD+V+A YADPDADFDK
Sbjct 61 GEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDK 120
Query 121 LAKEQEKLEAIIQTWDAHNLNNQLEIAANALNLPAWDSDVSLLSGGERRRVALCRLLLSK 180
LA EQ +LE IIQ D HNLN QLE AA+AL LP WD+ ++ LSGGERRRVALCRLLL K
Sbjct 121 LAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEK 180
Query 181 PDMLLLDEPTNHLDAESVSWLERFLKDFPGTIVAITHDRYFLDNVAEWILELDRGMGIPY 240
PDMLLLDEPTNHLDAESV+WLERFL DF GT+VAITHDRYFLDNVA WILELDRG GIP+
Sbjct 181 PDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPW 240
Query 241 QGNYSSWLEQKNARLEQEQKQEESFAKALKKELEWVRSNAKGQQKKNKARMERFEELNSK 300
+GNYSSWLEQK+ RL QE QE + K+++KELEWVR KG+Q K KAR+ RFEELNS
Sbjct 241 EGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGTKGRQSKGKARLARFEELNST 300
Query 301 EFQQRNETSEIYIPPGPRLGNKVVEVEGISKSFDGRLLYKDLTFTVPPTAIVGIVGPNGA 360
E+Q+RNET+E++IPPGPRLG+KV+EV + KS+ RLL L+F++P AIVGI+GPNGA
Sbjct 301 EYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYGDRLLIDSLSFSIPKGAIVGIIGPNGA 360
Query 361 GKTTLFRMMTGEQQPDTGTVTLGESVKVAYVGQIRDTLDNNKTVWEEVSGGLDILRIGDY 420
GK+TLFRM++G++QPD+GT+TLGE+VK+A V Q RD++DN+KTVWEEVSGGLDI++IG+
Sbjct 361 GKSTLFRMISGQEQPDSGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKIGNT 420
Query 421 EIASRAYIGRFNFKGQDQQKRVGELSGGERNRLQLAKILQLGANVILLDEPSNDLDIETL 480
E+ SRAY+GRFNFKG DQ KRVGELSGGER RL LAK+LQ+G N++LLDEP+NDLDIETL
Sbjct 421 EMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETL 480
Query 481 RALEDAILVFPGTVMVVSHDRWFLDRIATHILSFENE-QPEFYEGNYAEYEAYRQSRLGD 539
RALE+A+L FPG MV+SHDRWFLDRIATHIL +++E + EF+EGN+ EYE Y++ LG
Sbjct 481 RALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGA 540
Query 540 DAVQ-KRSKYKKI 551
DA++ KR KYK+I
Sbjct 541 DALEPKRIKYKRI 553
>P45127 Energy-dependent translational throttle protein EttA [Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20
/ Rd)]
Length=556
Score = 797 bits (2059), Expect = 0.0
Identities = 393/552 (71%), Positives = 467/552 (85%), Gaps = 2/552 (0%)
Query 2 AQYIYTMNRVSKMVPPKREILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFSG 61
+Q++YTM+RV K+VPPKR ILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDK+F G
Sbjct 3 SQFVYTMHRVGKVVPPKRHILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEG 62
Query 62 EARAQPGIKIGYLEQEPPLDPNKDVRGNVEDGVREALDALERLDQVFAEYADPDADFDKL 121
EAR QPGIKIGYL QEP L+P + VR VE+ V E +AL RLD+V+A YADPDADFDKL
Sbjct 63 EARPQPGIKIGYLPQEPKLEPQQTVREAVEEAVSEVKNALTRLDEVYALYADPDADFDKL 122
Query 122 AKEQEKLEAIIQTWDAHNLNNQLEIAANALNLPAWDSDVSLLSGGERRRVALCRLLLSKP 181
A EQ LEAIIQ D HNL+NQLE AA+AL LP WD+ + LSGGERRRVALCRLLL KP
Sbjct 123 AAEQANLEAIIQAHDGHNLDNQLERAADALRLPDWDAKIEHLSGGERRRVALCRLLLEKP 182
Query 182 DMLLLDEPTNHLDAESVSWLERFLKDFPGTIVAITHDRYFLDNVAEWILELDRGMGIPYQ 241
DMLLLDEPTNHLDAESV+WLERFL D+ GT+VAITHDRYFLDNVA WILELDRG GIP++
Sbjct 183 DMLLLDEPTNHLDAESVAWLERFLHDYEGTVVAITHDRYFLDNVAGWILELDRGEGIPWE 242
Query 242 GNYSSWLEQKNARLEQEQKQEESFAKALKKELEWVRSNAKGQQKKNKARMERFEELNSKE 301
GNYSSWLEQK RLEQEQ E + K++ KELEWVR N KG+Q K+KARM RF+ELNS E
Sbjct 243 GNYSSWLEQKEKRLEQEQATENARQKSIAKELEWVRQNPKGRQAKSKARMARFDELNSGE 302
Query 302 FQQRNETSEIYIPPGPRLGNKVVEVEGISKSFDGRLLYKDLTFTVPPTAIVGIVGPNGAG 361
+Q+RNET+E++IPPGPRLG+KV+EV+ ++KS+ R L DL+F++P AIVGI+G NGAG
Sbjct 303 YQKRNETNELFIPPGPRLGDKVIEVQNLTKSYGDRTLIDDLSFSIPKGAIVGIIGANGAG 362
Query 362 KTTLFRMMTGEQQPDTGTVTLGESVKVAYVGQIRDTLDNNKTVWEEVSGGLDILRIGDYE 421
K+TLFRM++G++QPD+G+VT+GE+V +A V Q RD++D+ KTVWEEVS G DIL IG++E
Sbjct 363 KSTLFRMLSGQEQPDSGSVTMGETVVLASVDQFRDSMDDKKTVWEEVSNGQDILTIGNFE 422
Query 422 IASRAYIGRFNFKGQDQQKRVGELSGGERNRLQLAKILQLGANVILLDEPSNDLDIETLR 481
I SRAY+GRFNFKG DQQKRVGELSGGER RL LAK+LQ G NV+LLDEP+NDLD+ETLR
Sbjct 423 IPSRAYVGRFNFKGVDQQKRVGELSGGERGRLHLAKLLQRGGNVLLLDEPTNDLDVETLR 482
Query 482 ALEDAILVFPGTVMVVSHDRWFLDRIATHILSFENE-QPEFYEGNYAEYEAYRQSRLGDD 540
ALE+AIL FPG MV+SHDRWFLDRIATHIL + +E + FYEGN+++YE +++ LGD
Sbjct 483 ALENAILEFPGCAMVISHDRWFLDRIATHILDYGDEGKVTFYEGNFSDYEEWKKKTLGDA 542
Query 541 AVQ-KRSKYKKI 551
A Q R KYK+I
Sbjct 543 ATQPHRIKYKRI 554
>P9WQK2 Energy-dependent translational throttle protein EttA [Mycobacterium
tuberculosis (strain CDC 1551 / Oshkosh)]
Length=558
Score = 588 bits (1517), Expect = 0.0
Identities = 306/559 (55%), Positives = 406/559 (73%), Gaps = 10/559 (2%)
Query 1 VAQYIYTMNRVSKMVPPKREILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFS 60
+A++IYTM +V K K IL D++LSF+PGAKIGV+G NGAGKS++LRIMAG+DK +
Sbjct 1 MAEFIYTMKKVRKAHGDK-VILDDVTLSFYPGAKIGVVGPNGAGKSSVLRIMAGLDKPNN 59
Query 61 GEARAQPGIKIGYLEQEPPLDPNKDVRGNVEDGVREALDALERLDQVFAEYADPDADFDK 120
G+A G +G L+QEPPL+ +K VRGNVE+G+ + L+R ++V AE D D+
Sbjct 60 GDAFLATGATVGILQQEPPLNEDKTVRGNVEEGMGDIKIKLDRFNEV-AELMATDYT-DE 117
Query 121 LAKEQEKLEAIIQTWDAHNLNNQLEIAANALNLPAWDSDVSLLSGGERRRVALCRLLLSK 180
L +E +L+ + DA +L+ QLE A +AL P D V+ LSGGERRRVALC+LLLSK
Sbjct 118 LMEEMGRLQEELDHADAWDLDAQLEQAMDALRCPPADEPVTNLSGGERRRVALCKLLLSK 177
Query 181 PDMLLLDEPTNHLDAESVSWLERFLKDFPGTIVAITHDRYFLDNVAEWILELDRGMGIPY 240
PD+LLLDEPTNHLDAESV WLE+ L +PG I+A+THDRYFLDNVAEWILELDRG PY
Sbjct 178 PDLLLLDEPTNHLDAESVQWLEQHLASYPGAILAVTHDRYFLDNVAEWILELDRGRAYPY 237
Query 241 QGNYSSWLEQKNARLEQEQKQEESFAKALKKELEWVRSNAKGQQKKNKARMERFEELNSK 300
+GNYS++LE+K RL + +++ K L +EL WVRS AK +Q K+KAR++R+EE+ ++
Sbjct 238 EGNYSTYLEKKAERLAVQGRKDAKLQKRLTEELAWVRSGAKARQAKSKARLQRYEEMAAE 297
Query 301 EFQQRN-ETSEIYIPPGPRLGNKVVEVEGISKSFDGRLLYKDLTFTVPPTAIVGIVGPNG 359
+ R + EI IP GPRLGN VVEV+ + K +DGR L KDL+F++P IVG++GPNG
Sbjct 298 AEKTRKLDFEEIQIPVGPRLGNVVVEVDHLDKGYDGRALIKDLSFSLPRNGIVGVIGPNG 357
Query 360 AGKTTLFRMMTGEQQPDTGTVTLGESVKVAYVGQIRDTLDNNKTVWEEVSGGLDILRIGD 419
GKTTLF+ + G + PD+G+V +GE+VK++YV Q R +D KTVWE VS GLD +++G
Sbjct 358 VGKTTLFKTIVGLETPDSGSVKVGETVKLSYVDQARAGIDPRKTVWEVVSDGLDYIQVGQ 417
Query 420 YEIASRAYIGRFNFKGQDQQKRVGELSGGERNRLQLAKILQLGANVILLDEPSNDLDIET 479
E+ SRAY+ F FKG DQQK G LSGGERNRL LA L+ G N+ILLDEP+NDLD+ET
Sbjct 418 TEVPSRAYVSAFGFKGPDQQKPAGVLSGGERNRLNLALTLKQGGNLILLDEPTNDLDVET 477
Query 480 LRALEDAILVFPGTVMVVSHDRWFLDRIATHILSFENEQPE-----FYEGNYAEYEAYRQ 534
L +LE+A+L FPG +V+SHDRWFLDR THIL++E + ++EGN+ YE +
Sbjct 478 LGSLENALLNFPGCAVVISHDRWFLDRTCTHILAWEGDDDNEAKWFWFEGNFGAYEENKV 537
Query 535 SRLGDDAVQ-KRSKYKKIT 552
RLG DA + R ++K+T
Sbjct 538 ERLGVDAARPHRVTHRKLT 556
>P9WQK3 Energy-dependent translational throttle protein EttA [Mycobacterium
tuberculosis (strain ATCC 25618 / H37Rv)]
Length=558
Score = 588 bits (1517), Expect = 0.0
Identities = 306/559 (55%), Positives = 406/559 (73%), Gaps = 10/559 (2%)
Query 1 VAQYIYTMNRVSKMVPPKREILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFS 60
+A++IYTM +V K K IL D++LSF+PGAKIGV+G NGAGKS++LRIMAG+DK +
Sbjct 1 MAEFIYTMKKVRKAHGDK-VILDDVTLSFYPGAKIGVVGPNGAGKSSVLRIMAGLDKPNN 59
Query 61 GEARAQPGIKIGYLEQEPPLDPNKDVRGNVEDGVREALDALERLDQVFAEYADPDADFDK 120
G+A G +G L+QEPPL+ +K VRGNVE+G+ + L+R ++V AE D D+
Sbjct 60 GDAFLATGATVGILQQEPPLNEDKTVRGNVEEGMGDIKIKLDRFNEV-AELMATDYT-DE 117
Query 121 LAKEQEKLEAIIQTWDAHNLNNQLEIAANALNLPAWDSDVSLLSGGERRRVALCRLLLSK 180
L +E +L+ + DA +L+ QLE A +AL P D V+ LSGGERRRVALC+LLLSK
Sbjct 118 LMEEMGRLQEELDHADAWDLDAQLEQAMDALRCPPADEPVTNLSGGERRRVALCKLLLSK 177
Query 181 PDMLLLDEPTNHLDAESVSWLERFLKDFPGTIVAITHDRYFLDNVAEWILELDRGMGIPY 240
PD+LLLDEPTNHLDAESV WLE+ L +PG I+A+THDRYFLDNVAEWILELDRG PY
Sbjct 178 PDLLLLDEPTNHLDAESVQWLEQHLASYPGAILAVTHDRYFLDNVAEWILELDRGRAYPY 237
Query 241 QGNYSSWLEQKNARLEQEQKQEESFAKALKKELEWVRSNAKGQQKKNKARMERFEELNSK 300
+GNYS++LE+K RL + +++ K L +EL WVRS AK +Q K+KAR++R+EE+ ++
Sbjct 238 EGNYSTYLEKKAERLAVQGRKDAKLQKRLTEELAWVRSGAKARQAKSKARLQRYEEMAAE 297
Query 301 EFQQRN-ETSEIYIPPGPRLGNKVVEVEGISKSFDGRLLYKDLTFTVPPTAIVGIVGPNG 359
+ R + EI IP GPRLGN VVEV+ + K +DGR L KDL+F++P IVG++GPNG
Sbjct 298 AEKTRKLDFEEIQIPVGPRLGNVVVEVDHLDKGYDGRALIKDLSFSLPRNGIVGVIGPNG 357
Query 360 AGKTTLFRMMTGEQQPDTGTVTLGESVKVAYVGQIRDTLDNNKTVWEEVSGGLDILRIGD 419
GKTTLF+ + G + PD+G+V +GE+VK++YV Q R +D KTVWE VS GLD +++G
Sbjct 358 VGKTTLFKTIVGLETPDSGSVKVGETVKLSYVDQARAGIDPRKTVWEVVSDGLDYIQVGQ 417
Query 420 YEIASRAYIGRFNFKGQDQQKRVGELSGGERNRLQLAKILQLGANVILLDEPSNDLDIET 479
E+ SRAY+ F FKG DQQK G LSGGERNRL LA L+ G N+ILLDEP+NDLD+ET
Sbjct 418 TEVPSRAYVSAFGFKGPDQQKPAGVLSGGERNRLNLALTLKQGGNLILLDEPTNDLDVET 477
Query 480 LRALEDAILVFPGTVMVVSHDRWFLDRIATHILSFENEQPE-----FYEGNYAEYEAYRQ 534
L +LE+A+L FPG +V+SHDRWFLDR THIL++E + ++EGN+ YE +
Sbjct 478 LGSLENALLNFPGCAVVISHDRWFLDRTCTHILAWEGDDDNEAKWFWFEGNFGAYEENKV 537
Query 535 SRLGDDAVQ-KRSKYKKIT 552
RLG DA + R ++K+T
Sbjct 538 ERLGVDAARPHRVTHRKLT 556
>O06476 Uncharacterized ABC transporter ATP-binding protein YfmR
[Bacillus subtilis (strain 168)]
Length=629
Score = 336 bits (862), Expect = 3e-111
Identities = 187/518 (36%), Positives = 296/518 (57%), Gaps = 14/518 (3%)
Query 19 REILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFSGEARAQPGIKIGYLEQEP 78
+ + IS +IG++G NG GKSTLL+++AG++ GE +++ +L Q+P
Sbjct 16 KTLFDHISFHIEENERIGLIGPNGTGKSTLLKVIAGLESIEEGEITKSGSVQVEFLHQDP 75
Query 79 PLDPNKDVRGNVEDGVREALDALERLDQVFAEYA-DPDADFDK--LAKEQEKLEAIIQTW 135
L + V ++ G + L ++ E DP+ + + L Q K++A W
Sbjct 76 ELPAGQTVLEHIYSGESAVMKTLREYEKALYELGKDPENEQRQKHLLAAQAKMDAN-NAW 134
Query 136 DAHNLNNQL--EIAANALNLPAWDSDVSLLSGGERRRVALCRLLLSKPDMLLLDEPTNHL 193
DA+ L + ++ N + P V+ LSGG+++RVA+ + L+ D+L+LDEPTNHL
Sbjct 135 DANTLAKTVLSKLGVNDVTKP-----VNELSGGQKKRVAIAKNLIQPADLLILDEPTNHL 189
Query 194 DAESVSWLERFLKDFPGTIVAITHDRYFLDNVAEWILELDRGMGIPYQGNYSSWLEQKNA 253
D E++ WLE +L +PG ++ +THDRYFL+ V I EL+RG Y+GNY +LE++
Sbjct 190 DNETIEWLEGYLSQYPGAVMLVTHDRYFLNRVTNRIYELERGSLYTYKGNYEVFLEKRAE 249
Query 254 RLEQEQKQEESFAKALKKELEWVRSNAKGQQKKNKARMERFEELNSKEFQQRNETSEIYI 313
R Q +++E L++EL W+R AK + K KAR++R E L + Q + + + I
Sbjct 250 REAQAEQKETKRQNLLRRELAWLRRGAKARSTKQKARIDRVETLKEQTGPQSSGSLDFAI 309
Query 314 PPGPRLGNKVVEVEGISKSFDGRLLYKDLTFTVPPTAIVGIVGPNGAGKTTLFRMMTGEQ 373
RLG +V+E E + ++DGR+L V P +GI+GPNG GKTTL + G
Sbjct 310 -GSHRLGKQVIEAENVMIAYDGRMLVDRFNELVIPGERIGIIGPNGIGKTTLLNALAGRH 368
Query 374 QPDTGTVTLGESVKVAYVGQIRDTLDNNKTVWEEVSGGLDILRIGDYE-IASRAYIGRFN 432
PD G +T+G++V++ Y Q ++ V + + ++++ D + I + + RF
Sbjct 369 TPDGGDITIGQTVRIGYYTQDHSEMNGELKVIDYIKETAEVVKTADGDMITAEQMLERFL 428
Query 433 FKGQDQQKRVGELSGGERNRLQLAKILQLGANVILLDEPSNDLDIETLRALEDAILVFPG 492
F QQ + +LSGGE+ RL L ++L NV+ LDEP+NDLD ETL LED I FPG
Sbjct 429 FPRSMQQTYIRKLSGGEKRRLYLLQVLMQEPNVLFLDEPTNDLDTETLSVLEDYIDQFPG 488
Query 493 TVMVVSHDRWFLDRIATHILSFE-NEQPEFYEGNYAEY 529
V+ VSHDR+FLDR+ ++ FE N ++G+Y++Y
Sbjct 489 VVITVSHDRYFLDRVVDRLIVFEGNGVISRFQGSYSDY 526
Score = 116 bits (291), Expect = 1e-30
Identities = 76/253 (30%), Positives = 131/253 (52%), Gaps = 44/253 (17%)
Query 31 PGAKIGVLGLNGAGKSTLLRIMAGVDKDFSGEARAQPGIKIGYLEQEPPLDPNKDVRGNV 90
PG +IG++G NG GK+TLL +AG G+ ++IGY Q+ + ++ G +
Sbjct 343 PGERIGIIGPNGIGKTTLLNALAGRHTPDGGDITIGQTVRIGYYTQD-----HSEMNGEL 397
Query 91 E--DGVREALDALERLDQVFAEYADPDADFDKLAKEQEKLEAIIQTWDAHNLNNQLEIAA 148
+ D ++E + ++ AD D + EQ LE +
Sbjct 398 KVIDYIKETAEVVKT------------ADGDMITAEQ-MLERFLFPRSMQQ--------- 435
Query 149 NALNLPAWDSDVSLLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVSWLERFLKDF 208
+ + LSGGE+RR+ L ++L+ +P++L LDEPTN LD E++S LE ++ F
Sbjct 436 ---------TYIRKLSGGEKRRLYLLQVLMQEPNVLFLDEPTNDLDTETLSVLEDYIDQF 486
Query 209 PGTIVAITHDRYFLDNVAEWILELD-RGMGIPYQGNYSSWLEQKNARL-----EQEQKQE 262
PG ++ ++HDRYFLD V + ++ + G+ +QG+YS ++E+ A+ E+K
Sbjct 487 PGVVITVSHDRYFLDRVVDRLIVFEGNGVISRFQGSYSDYMEESKAKKAAPKPAAEEKTA 546
Query 263 ESFAKALKKELEW 275
E+ K +K+L +
Sbjct 547 EAEPKKKRKKLSY 559
Score = 115 bits (288), Expect = 3e-30
Identities = 77/264 (29%), Positives = 133/264 (50%), Gaps = 37/264 (14%)
Query 323 VVEVEGISKSFDGRLLYKDLTFTVPPTAIVGIVGPNGAGKTTLFRMMTGEQQPDTGTVTL 382
+++ E + K++ + L+ ++F + +G++GPNG GK+TL +++ G + + G +T
Sbjct 3 ILKAENLYKTYGDKTLFDHISFHIEENERIGLIGPNGTGKSTLLKVIAGLESIEEGEITK 62
Query 383 GESVKVAYVGQIRDTLDNNKTVWEEVSGGLDILR--IGDYE------------------- 421
SV+V ++ Q + L +TV E + G + + +YE
Sbjct 63 SGSVQVEFLHQDPE-LPAGQTVLEHIYSGESAVMKTLREYEKALYELGKDPENEQRQKHL 121
Query 422 IASRAYIGRFN--------------FKGQDQQKRVGELSGGERNRLQLAKILQLGANVIL 467
+A++A + N D K V ELSGG++ R+ +AK L A++++
Sbjct 122 LAAQAKMDANNAWDANTLAKTVLSKLGVNDVTKPVNELSGGQKKRVAIAKNLIQPADLLI 181
Query 468 LDEPSNDLDIETLRALEDAILVFPGTVMVVSHDRWFLDRIATHILSFENEQPEFYEGNYA 527
LDEP+N LD ET+ LE + +PG VM+V+HDR+FL+R+ I E Y+GNY
Sbjct 182 LDEPTNHLDNETIEWLEGYLSQYPGAVMLVTHDRYFLNRVTNRIYELERGSLYTYKGNYE 241
Query 528 EYEAYRQSRLGDDAVQKRSKYKKI 551
+ R R A QK +K + +
Sbjct 242 VFLEKRAEREA-QAEQKETKRQNL 264
>P12622 ATP-binding protein ChvD [Rhizobium radiobacter]
Length=286
Score = 322 bits (825), Expect = 3e-110
Identities = 154/291 (53%), Positives = 219/291 (75%), Gaps = 6/291 (2%)
Query 101 LERLDQVFAEYADPDADFDKLAKEQEKLEAIIQTWDAHNLNNQLEIAANALNLPAWDSDV 160
++R +++ Y+D AD E KL+ +I + + +L NQ+E+A +AL P DS V
Sbjct 1 VDRYNELMMNYSDETAD------EGAKLQDMIDSQNLWDLENQVEMAMDALRCPPGDSAV 54
Query 161 SLLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVSWLERFLKDFPGTIVAITHDRY 220
+ LSGGERRRVALC+LLLS+PD+LLLDEPTNHLDAE+++WLE+ L+D+PG ++ ITHDRY
Sbjct 55 TGLSGGERRRVALCKLLLSQPDLLLLDEPTNHLDAETIAWLEKHLRDYPGAVMMITHDRY 114
Query 221 FLDNVAEWILELDRGMGIPYQGNYSSWLEQKNARLEQEQKQEESFAKALKKELEWVRSNA 280
FLDNV WILELDRG GIPY+GNYS++L+ K R++QE +++ S KA+ +E EW+ S+
Sbjct 115 FLDNVTGWILELDRGRGIPYEGNYSAYLQAKAKRMQQEAREDASRQKAISREQEWIASSP 174
Query 281 KGQQKKNKARMERFEELNSKEFQQRNETSEIYIPPGPRLGNKVVEVEGISKSFDGRLLYK 340
K +Q K+KAR+ R++EL +R ++I IP RLG V+E E ++KS+ R+L +
Sbjct 175 KARQTKSKARIRRYDELVEAAENRRPGDAQIVIPVAERLGRVVIEAENLTKSYGDRVLIE 234
Query 341 DLTFTVPPTAIVGIVGPNGAGKTTLFRMMTGEQQPDTGTVTLGESVKVAYV 391
+LTF +PP IVG++GPNGAGKTTLFRM+TG++QPD+G+VT+GE+V + YV
Sbjct 235 NLTFKLPPGGIVGVIGPNGAGKTTLFRMITGQEQPDSGSVTVGETVHLGYV 285
Score = 89.4 bits (220), Expect = 9e-23
Identities = 45/108 (42%), Positives = 68/108 (63%), Gaps = 0/108 (0%)
Query 445 LSGGERNRLQLAKILQLGANVILLDEPSNDLDIETLRALEDAILVFPGTVMVVSHDRWFL 504
LSGGER R+ L K+L +++LLDEP+N LD ET+ LE + +PG VM+++HDR+FL
Sbjct 57 LSGGERRRVALCKLLLSQPDLLLLDEPTNHLDAETIAWLEKHLRDYPGAVMMITHDRYFL 116
Query 505 DRIATHILSFENEQPEFYEGNYAEYEAYRQSRLGDDAVQKRSKYKKIT 552
D + IL + + YEGNY+ Y + R+ +A + S+ K I+
Sbjct 117 DNVTGWILELDRGRGIPYEGNYSAYLQAKAKRMQQEAREDASRQKAIS 164
Score = 45.8 bits (107), Expect = 2e-08
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 0/57 (0%)
Query 19 REILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFSGEARAQPGIKIGYLE 75
R ++++++ PG +GV+G NGAGK+TL R++ G ++ SG + +GY++
Sbjct 230 RVLIENLTFKLPPGGIVGVIGPNGAGKTTLFRMITGQEQPDSGSVTVGETVHLGYVD 286
>Q57242 ATP-binding protein Uup [Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=647
Score = 329 bits (843), Expect = 3e-108
Identities = 191/533 (36%), Positives = 298/533 (56%), Gaps = 6/533 (1%)
Query 21 ILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFSGEARAQPGIKIGYLEQEPPL 80
+L L P + ++G NGAGKSTLL+I+AG G+ + + + + LEQ+PP
Sbjct 18 LLDHAELHIEPNECVCLVGRNGAGKSTLLKIIAGDVLMDDGKIQYEKDLVVSRLEQDPPR 77
Query 81 DPNKDVRGNVEDGVREALDALERLDQVFAEYADPDADFDKLAKEQEKLEAIIQTWDAHNL 140
+ ++ V +GV D L+ Q+ + + +D ++ + E+++A ++ D
Sbjct 78 NAQGNIFDYVAEGVGHLTDLLKEYHQISVQLEENYSD--QILSQLEQVQAKLEHADGWRF 135
Query 141 NNQLEIAANALNLPAWDSDVSLLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVSW 200
N++ L L ++ +S LSGG R+ AL R L+ PD+LLLDEPTNHLD E++ W
Sbjct 136 ENKINEVLLKLGLNP-NTKLSALSGGWLRKAALARALVCDPDVLLLDEPTNHLDVEAIEW 194
Query 201 LERFLKDFPGTIVAITHDRYFLDNVAEWILELDRGMGIPYQGNYSSWLEQKNARLEQEQK 260
LE FL DF G+IV I+HDR F+ +A I++LDRG + Y GNY +L K L E
Sbjct 195 LENFLLDFQGSIVFISHDRSFIRKMATRIVDLDRGQLVSYPGNYDLYLTTKEENLRVEAL 254
Query 261 QEESFAKALKKELEWVRSNAKGQQKKNKARMERFEELNSKEFQQRNE--TSEIYIPPGPR 318
Q E F K L +E W+R K ++ +N+ R+ + + + Q+R+ T+++ + R
Sbjct 255 QNELFDKRLAQEEVWIRQGIKARRTRNEGRVRALKVMREERRQRRDVMGTAKLQLDTSSR 314
Query 319 LGNKVVEVEGISKSFDGRLLYKDLTFTVPPTAIVGIVGPNGAGKTTLFRMMTGEQQPDTG 378
G V E+E +S G+ L KD + T+ + +VGPNG GKTT +++ GE QP +G
Sbjct 315 SGKIVFEMEDVSYEIAGKTLLKDFSTTILRGDKIALVGPNGCGKTTFIKLLLGEIQPTSG 374
Query 379 TVTLGESVKVAYVGQIRDTLDNNKTVWEEVSGGLDILRIGDYEIASRAYIGRFNFKGQDQ 438
+ G +++AY Q R LD KTV + V+ G + I + Y+ F F +
Sbjct 375 KIRCGTKLEIAYFDQYRADLDPEKTVMDNVADGKQDIEINGVKRHVLGYLQDFLFPPKRA 434
Query 439 QKRVGELSGGERNRLQLAKILQLGANVILLDEPSNDLDIETLRALEDAILVFPGTVMVVS 498
V LSGGERNRL LAK+L N+++LDEP+NDLD+ETL LE+ + + GT+++VS
Sbjct 435 MTPVKALSGGERNRLLLAKLLLKPNNLLILDEPTNDLDVETLELLEEILTDYQGTLLIVS 494
Query 499 HDRWFLDRIATHILSFENE-QPEFYEGNYAEYEAYRQSRLGDDAVQKRSKYKK 550
HDR F+D AT FE + Y G + + + + + AV++++K KK
Sbjct 495 HDRQFIDNTATECYLFEGKGHLNKYVGGFFDAKQQQANFWASKAVEEQAKAKK 547
Score = 109 bits (272), Expect = 4e-28
Identities = 87/298 (29%), Positives = 142/298 (48%), Gaps = 43/298 (14%)
Query 5 IYTMNRVSKMVPPKREILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFSGEAR 64
++ M VS + K +LKD S + G KI ++G NG GK+T ++++ G + SG+ R
Sbjct 319 VFEMEDVSYEIAGKT-LLKDFSTTILRGDKIALVGPNGCGKTTFIKLLLGEIQPTSGKIR 377
Query 65 AQPGIKIGYLEQ-EPPLDPNKDVRGNVEDGVRE-ALDALERLDQVFAEYADPDADFDKLA 122
++I Y +Q LDP K V NV DG ++ ++ ++R + + D L
Sbjct 378 CGTKLEIAYFDQYRADLDPEKTVMDNVADGKQDIEINGVKRHVLGYLQ--------DFLF 429
Query 123 KEQEKLEAIIQTWDAHNLNNQLEIAANALNLPAWDSDVSLLSGGERRRVALCRLLLSKPD 182
+ + + V LSGGER R+ L +LLL +
Sbjct 430 PPKRAM-----------------------------TPVKALSGGERNRLLLAKLLLKPNN 460
Query 183 MLLLDEPTNHLDAESVSWLERFLKDFPGTIVAITHDRYFLDNVA-EWILELDRGMGIPYQ 241
+L+LDEPTN LD E++ LE L D+ GT++ ++HDR F+DN A E L +G Y
Sbjct 461 LLILDEPTNDLDVETLELLEEILTDYQGTLLIVSHDRQFIDNTATECYLFEGKGHLNKYV 520
Query 242 GNYSSWLEQKNARLEQEQKQEESFAKALK--KELEWVRSNAKGQQKKNKARMERFEEL 297
G + +Q+ + +E++ AK + KE V+++ + K K + EL
Sbjct 521 GGFFDAKQQQANFWASKAVEEQAKAKKSEPLKEESAVKNDRTSKPKSVKLSYKEQREL 578
Score = 89.0 bits (219), Expect = 1e-21
Identities = 69/252 (27%), Positives = 115/252 (46%), Gaps = 32/252 (13%)
Query 332 SFDGRLLYKDLTFTVPPTAIVGIVGPNGAGKTTLFRMMTGEQQPDTGTVTLGESVKVAY- 390
SF L + P V +VG NGAGK+TL +++ G+ D G + + + V+
Sbjct 12 SFSDAPLLDHAELHIEPNECVCLVGRNGAGKSTLLKIIAGDVLMDDGKIQYEKDLVVSRL 71
Query 391 -------------------VGQIRDTLD--NNKTVWEEVSGGLDILRIGDYEIASRAYIG 429
VG + D L + +V E + IL + A +
Sbjct 72 EQDPPRNAQGNIFDYVAEGVGHLTDLLKEYHQISVQLEENYSDQILSQLEQVQAKLEHAD 131
Query 430 RFNFK----------GQDQQKRVGELSGGERNRLQLAKILQLGANVILLDEPSNDLDIET 479
+ F+ G + ++ LSGG + LA+ L +V+LLDEP+N LD+E
Sbjct 132 GWRFENKINEVLLKLGLNPNTKLSALSGGWLRKAALARALVCDPDVLLLDEPTNHLDVEA 191
Query 480 LRALEDAILVFPGTVMVVSHDRWFLDRIATHILSFENEQPEFYEGNYAEYEAYRQSRLGD 539
+ LE+ +L F G+++ +SHDR F+ ++AT I+ + Q Y GNY Y ++ L
Sbjct 192 IEWLENFLLDFQGSIVFISHDRSFIRKMATRIVDLDRGQLVSYPGNYDLYLTTKEENLRV 251
Query 540 DAVQKRSKYKKI 551
+A+Q K++
Sbjct 252 EALQNELFDKRL 263
>P43672 ATP-binding protein Uup [Escherichia coli (strain K12)]
Length=635
Score = 301 bits (771), Expect = 1e-97
Identities = 186/502 (37%), Positives = 282/502 (56%), Gaps = 15/502 (3%)
Query 21 ILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFSGEARAQPGIKIGYLEQEPPL 80
+L + L ++ ++G NGAGKSTL++I+ G + + + L+Q+PP
Sbjct 18 LLDNAELHIEDNERVCLVGRNGAGKSTLMKILNREQGLDDGRIIYEQDLIVARLQQDPPR 77
Query 81 DPNKDVRGNVEDGVREALDALERLDQVFAEYA-DP-DADFDKLAKEQEKLEAIIQTWDAH 138
+ V V +G+ E + L+R + DP + + ++LAK QE+L D H
Sbjct 78 NVEGSVYDFVAEGIEEQAEYLKRYHDISRLVMNDPSEKNLNELAKVQEQL-------DHH 130
Query 139 NLNNQLEIAAN-ALNLPAWDSDVSL--LSGGERRRVALCRLLLSKPDMLLLDEPTNHLDA 195
NL QLE N L D +V+L LSGG R+ AL R L+S P +LLLDEPTNHLD
Sbjct 131 NLW-QLENRINEVLAQLGLDPNVALSSLSGGWLRKAALGRALVSNPRVLLLDEPTNHLDI 189
Query 196 ESVSWLERFLKDFPGTIVAITHDRYFLDNVAEWILELDRGMGIPYQGNYSSWLEQKNARL 255
E++ WLE FLK F GTI+ I+HDR F+ N+A I++LDRG + Y GNY +L +K L
Sbjct 190 ETIDWLEGFLKTFNGTIIFISHDRSFIRNMATRIVDLDRGKLVTYPGNYDQYLLEKEEAL 249
Query 256 EQEQKQEESFAKALKKELEWVRSNAKGQQKKNKARMERFEELNSKEFQQRNE--TSEIYI 313
E+ Q F + L +E W+R K ++ +N+ R+ + + + ++R T+++ +
Sbjct 250 RVEELQNAEFDRKLAQEEVWIRQGIKARRTRNEGRVRALKAMRRERGERREVMGTAKMQV 309
Query 314 PPGPRLGNKVVEVEGISKSFDGRLLYKDLTFTVPPTAIVGIVGPNGAGKTTLFRMMTGEQ 373
R G V E+E + +G+ L KD + V + ++GPNG GKTTL ++M G+
Sbjct 310 EEASRSGKIVFEMEDVCYQVNGKQLVKDFSAQVLRGDKIALIGPNGCGKTTLLKLMLGQL 369
Query 374 QPDTGTVTLGESVKVAYVGQIRDTLDNNKTVWEEVSGGLDILRIGDYEIASRAYIGRFNF 433
Q D+G + +G ++VAY Q R LD +KTV + ++ G + + Y+ F F
Sbjct 370 QADSGRIHVGTKLEVAYFDQHRAELDPDKTVMDNLAEGKQEVMVNGKPRHVLGYLQDFLF 429
Query 434 KGQDQQKRVGELSGGERNRLQLAKILQLGANVILLDEPSNDLDIETLRALEDAILVFPGT 493
+ V LSGGERNRL LA++ +N+++LDEP+NDLD+ETL LE+ I + GT
Sbjct 430 HPKRAMTPVRALSGGERNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELIDSYQGT 489
Query 494 VMVVSHDRWFLDRIATHILSFE 515
V++VSHDR F+D T FE
Sbjct 490 VLLVSHDRQFVDNTVTECWIFE 511
Score = 108 bits (269), Expect = 8e-28
Identities = 77/282 (27%), Positives = 129/282 (46%), Gaps = 40/282 (14%)
Query 19 REILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFSGEARAQPGIKIGYLEQ-E 77
++++KD S G KI ++G NG GK+TLL++M G + SG +++ Y +Q
Sbjct 332 KQLVKDFSAQVLRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHVGTKLEVAYFDQHR 391
Query 78 PPLDPNKDVRGNVEDGVREALDALERLDQVFAEYADPDADFDKLAKEQEKLEAIIQTWDA 137
LDP+K V N+ +G +E + + + + +Q +
Sbjct 392 AELDPDKTVMDNLAEGKQEVM----------------------VNGKPRHVLGYLQDFLF 429
Query 138 HNLNNQLEIAANALNLPAWDSDVSLLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAES 197
H + A LSGGER R+ L RL L ++L+LDEPTN LD E+
Sbjct 430 HPKRAMTPVRA--------------LSGGERNRLLLARLFLKPSNLLILDEPTNDLDVET 475
Query 198 VSWLERFLKDFPGTIVAITHDRYFLDNVAE--WILELDRGMGIPYQGNYSSWLEQKNARL 255
+ LE + + GT++ ++HDR F+DN WI E +G Y G Y Q+ +
Sbjct 476 LELLEELIDSYQGTVLLVSHDRQFVDNTVTECWIFEGGGKIG-RYVGGYHDARGQQEQYV 534
Query 256 EQEQKQEESFAKALKKELEWVRSNAKGQQKKNKARMERFEEL 297
+Q + +A + E V+ ++ K + +E+ +L
Sbjct 535 ALKQPAVKKTEEAAAAKAETVKRSSSKLSYKLQRELEQLPQL 576
Score = 87.0 bits (214), Expect = 5e-21
Identities = 68/264 (26%), Positives = 110/264 (42%), Gaps = 38/264 (14%)
Query 323 VVEVEGISKSFDGRLLYKDLTFTVPPTAIVGIVGPNGAGKTTLFRMMTGEQQPDTGTVTL 382
++ + G SF L + + V +VG NGAGK+TL +++ EQ D G +
Sbjct 3 LISMHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNREQGLDDGRIIY 62
Query 383 GESVKVAYVGQ-----------------------------------IRDTLDNNKTVWEE 407
+ + VA + Q + D + N +
Sbjct 63 EQDLIVARLQQDPPRNVEGSVYDFVAEGIEEQAEYLKRYHDISRLVMNDPSEKNLNELAK 122
Query 408 VSGGLDILRIGDYEIASRAYIGRFNFKGQDQQKRVGELSGGERNRLQLAKILQLGANVIL 467
V LD + E + + G D + LSGG + L + L V+L
Sbjct 123 VQEQLDHHNLWQLENRINEVLAQL---GLDPNVALSSLSGGWLRKAALGRALVSNPRVLL 179
Query 468 LDEPSNDLDIETLRALEDAILVFPGTVMVVSHDRWFLDRIATHILSFENEQPEFYEGNYA 527
LDEP+N LDIET+ LE + F GT++ +SHDR F+ +AT I+ + + Y GNY
Sbjct 180 LDEPTNHLDIETIDWLEGFLKTFNGTIIFISHDRSFIRNMATRIVDLDRGKLVTYPGNYD 239
Query 528 EYEAYRQSRLGDDAVQKRSKYKKI 551
+Y ++ L + +Q +K+
Sbjct 240 QYLLEKEEALRVEELQNAEFDRKL 263
>O05519 Putative ATP-binding protein YdiF [Bacillus subtilis (strain
168)]
Length=642
Score = 292 bits (748), Expect = 3e-94
Identities = 186/559 (33%), Positives = 309/559 (55%), Gaps = 24/559 (4%)
Query 5 IYTMNRVSKMVPPKREILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFSGEAR 64
I +N++SK IL +I L +I ++G NGAGKSTLL+I+AG GE
Sbjct 3 ILQVNQLSKSFGADT-ILNNIKLEVRNRDRIAIVGRNGAGKSTLLKIIAGQLSYEKGEII 61
Query 65 AQPGIKIGYLEQEPPLDPNKDVRGNVEDGVREALDALERLDQVFAEY---ADPDADFDKL 121
I +GYL Q LD ++ + V + L A+E+ + E ADP + + +
Sbjct 62 KPKDITMGYLAQHTGLDSKLTIKEELLT-VFDHLKAMEKEMRAMEEKMAAADP-GELESI 119
Query 122 AKEQEKLEAIIQTWDAHNLNNQLEIAANALNLPAWD--SDVSLLSGGERRRVALCRLLLS 179
K ++L+ + + + + L +D + V LSGG++ R+AL +LLL+
Sbjct 120 MKTYDRLQQEFKDKGGYQYEADVRSVLHGLGFSHFDDSTQVQSLSGGQKTRLALGKLLLT 179
Query 180 KPDMLLLDEPTNHLDAESVSWLERFLKDFPGTIVAITHDRYFLDNVAEWILELDRGMGIP 239
+PD+L+LDEPTNHLD ++++WLE +L+ + G I+ ++HDRYFLD V + E+ R
Sbjct 180 QPDLLILDEPTNHLDIDTLTWLEHYLQGYSGAILIVSHDRYFLDKVVNQVYEVSRAESKK 239
Query 240 YQGNYSSWLEQKNARLEQEQKQEESFAKALKKELEWVRSN--AKGQQKKNKARMERFEEL 297
Y GNYS++L+QK A+ E++ K E + K ++V N K+ ++R ++ E +
Sbjct 240 YHGNYSAYLDQKAAQYEKDLKMYEKQQDEIAKLQDFVDRNLARASTTKRAQSRRKQLERM 299
Query 298 NSKEFQQRNETS-EIYIPPGPRLGNKVVEVEGISKSFDGR-LLYKDLTFTVPPTAIVGIV 355
+ +E S + + GN+V+ V+ ++ S++ + L +++F + +V
Sbjct 300 DVMSKPLGDEKSANFHFDITKQSGNEVLRVQDLTISYENQPPLLTEVSFMLTRGESAALV 359
Query 356 GPNGAGKTTLFRMMTGEQQPDTGTVTLGESVKVAYVGQIRDTLDNNKTV----WEEVSGG 411
GPNG GK+TL + + +PD GT++ G +V V Y Q + L ++K V W+E G
Sbjct 360 GPNGIGKSTLLKTLIDTLKPDQGTISYGSNVSVGYYDQEQAELTSSKRVLDELWDEYPG- 418
Query 412 LDILRIGDYEIASRAYIGRFNFKGQDQQKRVGELSGGERNRLQLAKILQLGANVILLDEP 471
+ + EI R +G F F G D K V LSGGE+ RL LAK++ AN ++LDEP
Sbjct 419 -----LPEKEI--RTCLGNFLFSGDDVLKPVHSLSGGEKARLALAKLMLQKANFLILDEP 471
Query 472 SNDLDIETLRALEDAILVFPGTVMVVSHDRWFLDRIATHILSFENEQPEFYEGNYAEYEA 531
+N LD+++ LE+A++ +PGT++ VSHDR+F++RIAT +L + E Y G+Y Y
Sbjct 472 TNHLDLDSKEVLENALIDYPGTLLFVSHDRYFINRIATRVLELSSSHIEEYLGDYDYYTE 531
Query 532 YRQSRLGDDAVQKRSKYKK 550
+ +L + + ++ + K
Sbjct 532 KKTEQLELEKMNQQEETDK 550
Score = 119 bits (299), Expect = 1e-31
Identities = 87/283 (31%), Positives = 135/283 (48%), Gaps = 43/283 (15%)
Query 21 ILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFSGEARAQPGIKIGYLEQEPPL 80
+L ++S G ++G NG GKSTLL+ + K G + +GY +QE
Sbjct 342 LLTEVSFMLTRGESAALVGPNGIGKSTLLKTLIDTLKPDQGTISYGSNVSVGYYDQEQA- 400
Query 81 DPNKDVRGNVEDGVREALDALERLDQVFAEYADPDADFDKLAKEQEKLEAIIQTWDAHNL 140
E + LD+++ EY E+E I+T L
Sbjct 401 ---------------ELTSSKRVLDELWDEYPG--------LPEKE-----IRTC----L 428
Query 141 NNQLEIAANALNLPAWDSDVSLLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVSW 200
N L + L V LSGGE+ R+AL +L+L K + L+LDEPTNHLD +S
Sbjct 429 GNFLFSGDDVLK------PVHSLSGGEKARLALAKLMLQKANFLILDEPTNHLDLDSKEV 482
Query 201 LERFLKDFPGTIVAITHDRYFLDNVAEWILELDRGMGIPYQGNYSSWLEQKNARLEQE-- 258
LE L D+PGT++ ++HDRYF++ +A +LEL Y G+Y + E+K +LE E
Sbjct 483 LENALIDYPGTLLFVSHDRYFINRIATRVLELSSSHIEEYLGDYDYYTEKKTEQLELEKM 542
Query 259 --QKQEESFAKALKKELEWVRSNAKGQQKKNKARMERFEELNS 299
Q++ + +K + + K +KK + R+ R EE+ +
Sbjct 543 NQQEETDKTPATVKSDSKRSYEEEKEWKKKERQRLRRIEEIET 585
>Q9LV93 ABC transporter F family member 5 [Arabidopsis thaliana]
Length=692
Score = 281 bits (718), Expect = 2e-89
Identities = 183/554 (33%), Positives = 301/554 (54%), Gaps = 32/554 (6%)
Query 21 ILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFSGEA-RAQPGIKIGYLEQEPP 79
+LKD++ G K+G++G+NGAGK+T LRI+ G ++ SG +A+P +K+ +L QE
Sbjct 112 VLKDVTWEVKRGEKVGLVGVNGAGKTTQLRIITGQEEPDSGNVIKAKPNMKVAFLSQEFE 171
Query 80 LDPNKDVRGNVEDGVREALDALERLDQVFAEYADPDADFDKLAKEQEKLEAIIQTWDAHN 139
+ +K VR +E ++ E+L++V D D + + ++ + + + A N
Sbjct 172 VSMSKTVREEFMTAFKEEMEITEKLEKVQKAIEGSVDDLDLMGRLLDEFDLLQRRAQAVN 231
Query 140 LNN---QLEIAANALNLPAWDSD--VSLLSGGERRRVALCRLLLSKPDMLLLDEPTNHLD 194
L++ ++ L D+D V+ SGG + R++L ++LL PD+LLLDEPTNHLD
Sbjct 232 LDSVDAKISKLMPELGFAPEDADRLVASFSGGWQMRMSLGKILLQDPDLLLLDEPTNHLD 291
Query 195 AESVSWLERFLKDFPGTIVAITHDRYFLDNVAEWILELDRGMGIPYQGNYS-------SW 247
+++ WLE +L+ +V I+HDR FLD + I+E + G+ ++GNYS W
Sbjct 292 LDTIEWLEGYLQKQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTFEGNYSQYVISKAEW 351
Query 248 LEQKNARLEQEQKQEESFAKALKKELEWVRSNAKGQQKKNKARMERFEELNSKEFQQRNE 307
+E +NA E++QK +S K L L ++ + + K + +EL K FQ++
Sbjct 352 IETQNAAWEKQQKDIDS-TKDLIARLGAGANSGRASTAEKKLEKLQEQELIEKPFQRKQ- 409
Query 308 TSEIYIPPGPRLGNKVVEVEGISKSFDGRLLYKDLTFTVPPTAIVGIVGPNGAGKTTLFR 367
+I P G VV V+ I F+ ++L+K ++ + I+GPNG GK+TL +
Sbjct 410 -MKIRFPERGTSGRSVVNVKNIDFGFEDKMLFKKANLSIERGEKIAILGPNGCGKSTLLK 468
Query 368 MMTGEQQPDTGTVTLGE-SVKVAYVGQIR-DTLDNNKTVWEEVSGGLDILRIGDYEIASR 425
++ G ++P G V LGE +V Y Q + + LD +KTV E V + R D +
Sbjct 469 LIMGLEKPVKGEVILGEHNVLPNYFEQNQAEVLDLDKTVLETVCEAAEDWRSDDI----K 524
Query 426 AYIGRFNFKGQDQQKRVGELSGGERNRLQLAKILQLGANVILLDEPSNDLDIETLRALED 485
+GR NFK ++V LSGGE+ RL K + + +++LDEP+N LDI + LE+
Sbjct 525 GLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVTPSTLLVLDEPTNHLDIPSKEMLEE 584
Query 486 AILVFPGTVMVVSHDRWFLDRIATHILSFENEQPEFYEGNYAEY----------EAYRQS 535
AI + GTV+ VSHDR+F+ +I ++ E+ E Y G+Y Y E R++
Sbjct 585 AINEYQGTVIAVSHDRYFIKQIVNRVIEVEDGCLEDYAGDYNYYLEKNLDARTKELEREA 644
Query 536 RLGDDAVQKRSKYK 549
L + A + ++K K
Sbjct 645 ELEEKAPKVKAKSK 658
Score = 127 bits (320), Expect = 4e-34
Identities = 86/288 (30%), Positives = 145/288 (50%), Gaps = 41/288 (14%)
Query 21 ILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFSGEA-RAQPGIKIGYLEQEPP 79
+ K +LS G KI +LG NG GKSTLL+++ G++K GE + + Y EQ
Sbjct 439 LFKKANLSIERGEKIAILGPNGCGKSTLLKLIMGLEKPVKGEVILGEHNVLPNYFEQNQA 498
Query 80 LDPNKDVRGNVEDGVREALDALERLDQVFAEYADPDADFDKLAKEQEKLEAIIQTWDAHN 139
E LD + + + E A+ ++ D
Sbjct 499 ----------------EVLDLDKTVLETVCEAAED-----------------WRSDDIKG 525
Query 140 LNNQLEIAANALNLPAWDSDVSLLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVS 199
L + A+ L D VSLLSGGE+ R+A C+ +++ +L+LDEPTNHLD S
Sbjct 526 LLGRCNFKADML-----DRKVSLLSGGEKARLAFCKFMVTPSTLLVLDEPTNHLDIPSKE 580
Query 200 WLERFLKDFPGTIVAITHDRYFLDNVAEWILELDRGMGIPYQGNYSSWLEQK-NARLEQE 258
LE + ++ GT++A++HDRYF+ + ++E++ G Y G+Y+ +LE+ +AR ++
Sbjct 581 MLEEAINEYQGTVIAVSHDRYFIKQIVNRVIEVEDGCLEDYAGDYNYYLEKNLDARTKEL 640
Query 259 QKQEESFAKALKKELEWVRSNAKGQQKKNKARMERFEELNSKEFQQRN 306
+++ E KA K + + S A+ + +K K +M+ F++ K +N
Sbjct 641 EREAELEEKAPKVKAKSKMSKAEKEARK-KQKMQAFQQAKQKSKASKN 687
Score = 118 bits (295), Expect = 5e-31
Identities = 90/290 (31%), Positives = 142/290 (49%), Gaps = 52/290 (18%)
Query 288 KARMERFEELNSKEFQQ------RNETSEIYIPPGPRLGNKVVEVEGISKSFDGRLLYKD 341
K R + E L SK+ Q RN S G G V++E I KS+ G + KD
Sbjct 59 KQRQDEIESLFSKQPSQQDSDRKRNGKSSKNGASGISSG---VKLENIRKSYKGVTVLKD 115
Query 342 LTFTVPPTAIVGIVGPNGAGKTTLFRMMTGEQQPDTGTVTLGE-SVKVAYVGQIRDTLDN 400
+T+ V VG+VG NGAGKTT R++TG+++PD+G V + ++KVA++ Q +
Sbjct 116 VTWEVKRGEKVGLVGVNGAGKTTQLRIITGQEEPDSGNVIKAKPNMKVAFLSQ-EFEVSM 174
Query 401 NKTVWEE---------------------VSGGLDIL-----RIGDYEIASR--------- 425
+KTV EE + G +D L + ++++ R
Sbjct 175 SKTVREEFMTAFKEEMEITEKLEKVQKAIEGSVDDLDLMGRLLDEFDLLQRRAQAVNLDS 234
Query 426 ------AYIGRFNFKGQDQQKRVGELSGGERNRLQLAKILQLGANVILLDEPSNDLDIET 479
+ F +D + V SGG + R+ L KIL +++LLDEP+N LD++T
Sbjct 235 VDAKISKLMPELGFAPEDADRLVASFSGGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDT 294
Query 480 LRALEDAILVFPGTVMVVSHDRWFLDRIATHILSFENEQPEFYEGNYAEY 529
+ LE + ++++SHDR FLD++ T I+ E +EGNY++Y
Sbjct 295 IEWLEGYLQKQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTFEGNYSQY 344
>Q8K9I3 ATP-binding protein Uup [Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg)]
Length=592
Score = 267 bits (682), Expect = 5e-85
Identities = 162/501 (32%), Positives = 273/501 (54%), Gaps = 38/501 (8%)
Query 20 EILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFSGEARAQPGIKIGYLEQEPP 79
EILK+ L +I ++G NGAGKSTLL+++ + G Q IKI YL+Q+ P
Sbjct 17 EILKNAVLYINKKERISLIGKNGAGKSTLLKVINKNQELDHGSIIYQKNIKISYLKQDNP 76
Query 80 LDPNKDVRGNVEDGVREALDALERLDQVFAEYADPDADFDKLAKEQEKLEAIIQTWDAHN 139
K++ ++ D ++ ++L KE K I +
Sbjct 77 ----KNLDISIYDFIK-----------------------NQLKKENNKEININTIVEIKK 109
Query 140 LNNQLEIAANALNLPAWDSDVSLLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVS 199
+ +I ++L +S LSGG R+V L LLS+PD+LLLDEPTNHLD +++
Sbjct 110 IIKTFQIDKHSL--------LSELSGGSLRKVVLGSALLSQPDVLLLDEPTNHLDINTIA 161
Query 200 WLERFLKDFPGTIVAITHDRYFLDNVAEWILELDRGMGIPYQGNYSSWLEQKNARLEQEQ 259
WLE+FLK F GT + I+HDR F+ N+ I++LDRG + G+Y +++ K E+
Sbjct 162 WLEKFLKKFSGTTLFISHDRSFIQNLCTRIIDLDRGKLTSFPGDYKEFIKLKKENNRIEK 221
Query 260 KQEESFAKALKKELEWVRSNAKGQQKKNKARMERFEELNS--KEFQQRNETSEIYIPPGP 317
+++ F + L+KE W+R K + +N+ R+ + L K +++ + + I
Sbjct 222 TKKKLFDQHLEKEEIWIRKGIKARTTRNEGRVRNLKVLRKEYKNYKKIENFNNVIINEIK 281
Query 318 RLGNKVV-EVEGISKSFDGRLLYKDLTFTVPPTAIVGIVGPNGAGKTTLFRMMTGEQQPD 376
K++ +++ IS + + + + + + +G++G NG+GK+T+ +++ GE++
Sbjct 282 NYSGKIIFKLKNISFFIEKKTIIQSFSSIIQYGDKIGLIGNNGSGKSTMIKILMGEKKIQ 341
Query 377 TGTVTLGESVKVAYVGQIRDTLDNNKTVWEEVSGGLDILRIGDYEIASRAYIGRFNFKGQ 436
G++ G + +AY Q R TLD+NK++ E V+ G + + + E Y+ +F FK
Sbjct 342 KGSIHFGTKLNIAYFDQDRSTLDSNKSILENVNNGREKIVLNGKEQHLIGYLKKFLFKPN 401
Query 437 DQQKRVGELSGGERNRLQLAKILQLGANVILLDEPSNDLDIETLRALEDAILVFPGTVMV 496
+ V LSGGE NRL LAK+ +NV++LDEP+NDLD++TL LE+ I+ + GTV++
Sbjct 402 QMKCLVKNLSGGECNRLLLAKLFLKPSNVLILDEPTNDLDLDTLELLENIIIKYSGTVLI 461
Query 497 VSHDRWFLDRIATHILSFENE 517
VSHDR F++ F+ +
Sbjct 462 VSHDRNFIENTVNKYWIFKGD 482
Score = 99.0 bits (245), Expect = 7e-25
Identities = 74/298 (25%), Positives = 144/298 (48%), Gaps = 46/298 (15%)
Query 5 IYTMNRVSKMVPPKREILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFSGEAR 64
I+ + +S + K+ I++ S G KIG++G NG+GKST+++I+ G K G
Sbjct 288 IFKLKNISFFIE-KKTIIQSFSSIIQYGDKIGLIGNNGSGKSTMIKILMGEKKIQKGSIH 346
Query 65 AQPGIKIGYLEQE-PPLDPNKDVRGNVEDGVREALDALERLDQVFAEYADPDADFDKLAK 123
+ I Y +Q+ LD NK + NV +G RE + L +Q Y K
Sbjct 347 FGTKLNIAYFDQDRSTLDSNKSILENVNNG-REKI-VLNGKEQHLIGY------LKKFLF 398
Query 124 EQEKLEAIIQTWDAHNLNNQLEIAANALNLPAWDSDVSLLSGGERRRVALCRLLLSKPDM 183
+ +++ +++ LSGGE R+ L +L L ++
Sbjct 399 KPNQMKCLVKN----------------------------LSGGECNRLLLAKLFLKPSNV 430
Query 184 LLLDEPTNHLDAESVSWLERFLKDFPGTIVAITHDRYFLDNVAE--WILELDRGMGIPYQ 241
L+LDEPTN LD +++ LE + + GT++ ++HDR F++N WI + D G+ +
Sbjct 431 LILDEPTNDLDLDTLELLENIIIKYSGTVLIVSHDRNFIENTVNKYWIFKGD-GLINTHF 489
Query 242 GNYSSWLEQKNARLEQEQKQEESFAKALKKELEWVRSNAKGQQKKNKARMERFEELNS 299
++++ +++KN ++ Q++ +K + ++++ +K+ K + E++ +
Sbjct 490 SSHNNIIKEKNKKI-----QKKYVLNPIKSNISFLKTKQNQVKKELKKVLNEIEKIEN 542
Score = 94.0 bits (232), Expect = 3e-23
Identities = 57/212 (27%), Positives = 108/212 (51%), Gaps = 10/212 (5%)
Query 323 VVEVEGISKSFDGRLLYKDLTFTVPPTAIVGIVGPNGAGKTTLFRMMTGEQQPDTGTVTL 382
++ ++ +F + K+ + + ++G NGAGK+TL +++ Q+ D G++
Sbjct 3 LISIQNAFLAFSDLEILKNAVLYINKKERISLIGKNGAGKSTLLKVINKNQELDHGSIIY 62
Query 383 GESVKVAYVGQIRDTLDNNK----TVWEEVSGGLDILRIGDYEIASRAYIGRFNFKGQ-D 437
+++K++Y+ Q DN K ++++ + L + I + I + Q D
Sbjct 63 QKNIKISYLKQ-----DNPKNLDISIYDFIKNQLKKENNKEININTIVEIKKIIKTFQID 117
Query 438 QQKRVGELSGGERNRLQLAKILQLGANVILLDEPSNDLDIETLRALEDAILVFPGTVMVV 497
+ + ELSGG ++ L L +V+LLDEP+N LDI T+ LE + F GT + +
Sbjct 118 KHSLLSELSGGSLRKVVLGSALLSQPDVLLLDEPTNHLDINTIAWLEKFLKKFSGTTLFI 177
Query 498 SHDRWFLDRIATHILSFENEQPEFYEGNYAEY 529
SHDR F+ + T I+ + + + G+Y E+
Sbjct 178 SHDRSFIQNLCTRIIDLDRGKLTSFPGDYKEF 209
Score = 18.9 bits (37), Expect = 9.6
Identities = 9/21 (43%), Positives = 14/21 (67%), Gaps = 2/21 (10%)
Query 124 EQEKLEAIIQTWDAHNLNNQL 144
E++KLE I+ W+ NL +L
Sbjct 574 EEKKLEKILIYWE--NLEKKL 592
>Q45978 ATP-binding protein Uup [Caulobacter vibrioides (strain
ATCC 19089 / CB15)]
Length=608
Score = 250 bits (638), Expect = 2e-78
Identities = 170/513 (33%), Positives = 264/513 (51%), Gaps = 69/513 (13%)
Query 19 REILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAG--VDKDFSGEARAQPGIKIGYLEQ 76
+ + + L+ P + ++G NGAGKSTLL+I+AG V+ D SGE QPG K+ Y+ Q
Sbjct 22 KPLFDGVDLALEPRVRACLVGRNGAGKSTLLKILAGQGVEAD-SGERAVQPGAKVVYVSQ 80
Query 77 EPPLDPNKDVRGNVEDGVREALDALERLDQVFAEYADPDADFDKLAKEQEKLEAIIQTWD 136
EP + + G ++ + A AD D DK AK
Sbjct 81 EPEITGETLLDYATAGGAQDY--------EAQAALADFGLDPDKSAKG------------ 120
Query 137 AHNLNNQLEIAANALNLPAWDSDVSLLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAE 196
LSGGE RR AL R +PD+LLLDEPTNHLD
Sbjct 121 --------------------------LSGGETRRAALARAFAEQPDVLLLDEPTNHLDIF 154
Query 197 SVSWLERFLKDFPGTIVAITHDRYFLDNVAE---W-----ILELDRGMGIPYQGNYSSWL 248
++ LE L + ++HDR FL+ V E W I LD+G + +W
Sbjct 155 AIQTLEDELAASKCAALIVSHDRAFLNRVTERCFWLEHRKIRRLDKGFS-----EFEAWA 209
Query 249 EQKNARLEQEQKQEESFAKALKKELEWVRSNAKGQQKKNKARMERFEELNSKEFQQRNE- 307
E A +E ++ + K L++E W+ +G++ +N+ R L +++ +++E
Sbjct 210 ESIMAADAEEARRLD---KVLERENAWLARGVQGRRARNEGRRRALLALRAEKKDRQSEL 266
Query 308 --TSEIYIPPGPRLGNKVVEVEGISKSFDGRLLYKDLTFTVPPTAIVGIVGPNGAGKTTL 365
T + + G +VVE +G++K F R + ++ + + V +VGPNGAGKTTL
Sbjct 267 RGTMTMAVESAGTSGKRVVEAKGVTKRFGERTIVENFSTRILRGDRVALVGPNGAGKTTL 326
Query 366 FRMMTGEQQPDTGTVTLGESVKVAYVGQIRDTLDNNKTVWEEVS-GGLDILRIGDYEIAS 424
+++ GE + D GTV LG +++V+Y+ Q R L + TVW+ ++ GG D + + +
Sbjct 327 VKLLLGELERDAGTVQLGTNLEVSYIDQARMALSDKITVWDFLTPGGGDSIIVRGHPKHV 386
Query 425 RAYIGRFNFKGQDQQKRVGELSGGERNRLQLAKILQLGANVILLDEPSNDLDIETLRALE 484
Y F F ++ V LSGGERNRL LA+ L N+++LDEP+NDLD++TL LE
Sbjct 387 AGYAKEFLFTDAQLRQPVTSLSGGERNRLLLARALANPTNLMVLDEPTNDLDMDTLDLLE 446
Query 485 DAILVFPGTVMVVSHDRWFLDRIATHILSFENE 517
D + F GT+++VSHDR F+DR+A+ ++ + +
Sbjct 447 DLLADFDGTLILVSHDRDFIDRLASSTIALDGK 479
Score = 98.6 bits (244), Expect = 1e-24
Identities = 65/224 (29%), Positives = 113/224 (50%), Gaps = 12/224 (5%)
Query 323 VVEVEGISKSFDGRLLYKDLTFTVPPTAIVGIVGPNGAGKTTLFRMMTGEQ-QPDTGTVT 381
V+ ++ + + + L+ + + P +VG NGAGK+TL +++ G+ + D+G
Sbjct 9 VLALKDVRLADGAKPLFDGVDLALEPRVRACLVGRNGAGKSTLLKILAGQGVEADSGERA 68
Query 382 LGESVKVAYVGQIRDTLDNNKTVWEEVSGGLDILRIGDYEIASRAYIGRFNFKGQDQQKR 441
+ KV YV Q + +T+ + + G G + ++A + F G D K
Sbjct 69 VQPGAKVVYVSQEPEI--TGETLLDYATAG------GAQDYEAQAALADF---GLDPDKS 117
Query 442 VGELSGGERNRLQLAKILQLGANVILLDEPSNDLDIETLRALEDAILVFPGTVMVVSHDR 501
LSGGE R LA+ +V+LLDEP+N LDI ++ LED + ++VSHDR
Sbjct 118 AKGLSGGETRRAALARAFAEQPDVLLLDEPTNHLDIFAIQTLEDELAASKCAALIVSHDR 177
Query 502 WFLDRIATHILSFENEQPEFYEGNYAEYEAYRQSRLGDDAVQKR 545
FL+R+ E+ + + ++E+EA+ +S + DA + R
Sbjct 178 AFLNRVTERCFWLEHRKIRRLDKGFSEFEAWAESIMAADAEEAR 221
Score = 86.7 bits (213), Expect = 6e-21
Identities = 77/291 (26%), Positives = 134/291 (46%), Gaps = 44/291 (15%)
Query 18 KREILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFSGEARAQPGIKIGYLEQE 77
+R I+++ S G ++ ++G NGAGK+TL++++ G + +G + +++ Y+
Sbjct 296 ERTIVENFSTRILRGDRVALVGPNGAGKTTLVKLLLGELERDAGTVQLGTNLEVSYI--- 352
Query 78 PPLDPNKDVRGNVEDGVREALDALERLDQVFA-EYADPDADFDKLAKEQEKLEAIIQTWD 136
D R AL D++ ++ P + + K A
Sbjct 353 --------------DQARMALS-----DKITVWDFLTPGGGDSIIVRGHPKHVA------ 387
Query 137 AHNLNNQLEIAANALNLPAWDSDVSLLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAE 196
+ L P V+ LSGGER R+ L R L + ++++LDEPTN LD +
Sbjct 388 --GYAKEFLFTDAQLRQP-----VTSLSGGERNRLLLARALANPTNLMVLDEPTNDLDMD 440
Query 197 SVSWLERFLKDFPGTIVAITHDRYFLDNVAEWILELD-RGMGIPYQGNYSSWLEQKNARL 255
++ LE L DF GT++ ++HDR F+D +A + LD +G + G ++ ++Q N
Sbjct 441 TLDLLEDLLADFDGTLILVSHDRDFIDRLASSTIALDGKGGVVETPGGWTDLMDQ-NPDF 499
Query 256 EQEQKQEESFA---KALKKELEWVRSNAKGQQK---KNKARMERFEELNSK 300
+ K +FA KA K + K K K++ R+E E L +K
Sbjct 500 FKASKGGTAFAPVSKAATKPAPAAPAAPKKSAKLSYKDQRRLEECEALIAK 550
>P0A9U3 Probable ATP-binding protein YbiT [Escherichia coli (strain
K12)]
Length=530
Score = 247 bits (630), Expect = 4e-78
Identities = 159/519 (31%), Positives = 278/519 (54%), Gaps = 17/519 (3%)
Query 19 REILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFSGEARAQPGIKIGYLEQEP 78
+ + ++IS+ F G + G++G NG+GKST ++I+ G + G P +IG L Q+
Sbjct 14 KPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQDQ 73
Query 79 PLDPNKDVRGNVEDGVREALDALERLDQVFAEYADPDADFDKLAKEQEKLEAIIQTWDAH 138
V V G +E + + D+++A + D K+A LE D +
Sbjct 74 FAFEEFTVLDTVIMGHKELWEVKQERDRIYALPEMSEEDGYKVAD----LEVKYGEMDGY 129
Query 139 NLNNQLEIAANALNLPAWD--SDVSLLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAE 196
+ + + +P +S ++ G + RV L + L + PD+LLLDEPTN+LD +
Sbjct 130 SAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFADPDILLLDEPTNNLDID 189
Query 197 SVSWLERFLKDFPGTIVAITHDRYFLDNVAEWILELDRGMGIPYQGNYSSWLE---QKNA 253
++ WLE+ L + T++ I+HDR+FL+ V + +LD G Y GNY ++ Q
Sbjct 190 TIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEYMTAATQARE 249
Query 254 RLEQEQKQEESFAKALKKELEWVRSNA-KGQQKKNKARMERFEELNSKEFQQRNETSE-I 311
RL + ++++ L+ + +NA K +Q ++AR + +++ +E + + + I
Sbjct 250 RLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRAR--QIDKIKLEEVKASSRQNPFI 307
Query 312 YIPPGPRLGNKVVEVEGISKSFDGRLLYKDLTFTVPPTAIVGIVGPNGAGKTTLFRMMTG 371
+L +EVEG++K FD L+K+L + + ++G NG GK+TL + + G
Sbjct 308 RFEQDKKLFRNALEVEGLTKGFDNGPLFKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVG 367
Query 372 EQQPDTGTVTLGESVKVAYVGQIRD-TLDNNKTVWEEVSGGLDILRIGDYEIASRAYIGR 430
+ QPD+GTV E+ ++ Y Q + +N+ TV+E +S + GD E A R+ +GR
Sbjct 368 DLQPDSGTVKWSENARIGYYAQDHEYEFENDLTVFEWMS---QWKQEGDDEQAVRSILGR 424
Query 431 FNFKGQDQQKRVGELSGGERNRLQLAKILQLGANVILLDEPSNDLDIETLRALEDAILVF 490
F D +K LSGGE+ R+ K++ N++++DEP+N LD+E++ +L A+ ++
Sbjct 425 LLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMALELY 484
Query 491 PGTVMVVSHDRWFLDRIATHILSFENEQPEFYEGNYAEY 529
GT++ VSHDR F+ +AT IL E+ + GNY +Y
Sbjct 485 QGTLIFVSHDREFVSSLATRILEITPERVIDFSGNYEDY 523
Score = 105 bits (263), Expect = 3e-27
Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 37/231 (16%)
Query 21 ILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFSGEARAQPGIKIGYLEQEPPL 80
+ K+++L G K+ VLG NG GKSTLL+ + G + SG + +IGY Q+
Sbjct 334 LFKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLQPDSGTVKWSENARIGYYAQDHEY 393
Query 81 DPNKDVRGNVEDGVREALDALERLDQVFAEYADPDADFDKLAKEQEKLEAIIQTWDAHNL 140
+ D L E + Q E D A ++
Sbjct 394 EFEND------------LTVFEWMSQWKQEGDDEQA--------------------VRSI 421
Query 141 NNQLEIAANALNLPAWDSDVSLLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVSW 200
+L + + + PA +LSGGE+ R+ +L++ KP++L++DEPTNHLD ES+
Sbjct 422 LGRLLFSQDDIKKPA-----KVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIES 476
Query 201 LERFLKDFPGTIVAITHDRYFLDNVAEWILELDRGMGIPYQGNYSSWLEQK 251
L L+ + GT++ ++HDR F+ ++A ILE+ I + GNY +L K
Sbjct 477 LNMALELYQGTLIFVSHDREFVSSLATRILEITPERVIDFSGNYEDYLRSK 527
Score = 90.9 bits (224), Expect = 2e-22
Identities = 66/254 (26%), Positives = 125/254 (49%), Gaps = 39/254 (15%)
Query 329 ISKSFDGRLLYKDLTFTVPPTAIVGIVGPNGAGKTTLFRMMTGEQQPDTGTVTLGESVKV 388
++ F + L+++++ G++G NG+GK+T +++ G+ +P G V+L + ++
Sbjct 7 VTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERI 66
Query 389 AYVGQ---------IRDT-LDNNKTVWE------------EVSGGLDILRIGDYEI---- 422
+ Q + DT + +K +WE E+S D ++ D E+
Sbjct 67 GKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRIYALPEMSEE-DGYKVADLEVKYGE 125
Query 423 ----ASRAYIGRF----NFKGQDQQKRVGELSGGERNRLQLAKILQLGANVILLDEPSND 474
++ A G + + E++ G + R+ LA+ L +++LLDEP+N+
Sbjct 126 MDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFADPDILLLDEPTNN 185
Query 475 LDIETLRALEDAILVFPGTVMVVSHDRWFLDRIATHILSFENEQPEFYEGNYAEY----E 530
LDI+T+R LE + T++++SHDR FL+ + TH+ + + Y GNY EY
Sbjct 186 LDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEYMTAAT 245
Query 531 AYRQSRLGDDAVQK 544
R+ L D+A +K
Sbjct 246 QARERLLADNAKKK 259
>P0A9U4 Probable ATP-binding protein YbiT [Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC)]
Length=530
Score = 247 bits (630), Expect = 4e-78
Identities = 159/519 (31%), Positives = 278/519 (54%), Gaps = 17/519 (3%)
Query 19 REILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFSGEARAQPGIKIGYLEQEP 78
+ + ++IS+ F G + G++G NG+GKST ++I+ G + G P +IG L Q+
Sbjct 14 KPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQDQ 73
Query 79 PLDPNKDVRGNVEDGVREALDALERLDQVFAEYADPDADFDKLAKEQEKLEAIIQTWDAH 138
V V G +E + + D+++A + D K+A LE D +
Sbjct 74 FAFEEFTVLDTVIMGHKELWEVKQERDRIYALPEMSEEDGYKVAD----LEVKYGEMDGY 129
Query 139 NLNNQLEIAANALNLPAWD--SDVSLLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAE 196
+ + + +P +S ++ G + RV L + L + PD+LLLDEPTN+LD +
Sbjct 130 SAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFADPDILLLDEPTNNLDID 189
Query 197 SVSWLERFLKDFPGTIVAITHDRYFLDNVAEWILELDRGMGIPYQGNYSSWLE---QKNA 253
++ WLE+ L + T++ I+HDR+FL+ V + +LD G Y GNY ++ Q
Sbjct 190 TIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEYMTAATQARE 249
Query 254 RLEQEQKQEESFAKALKKELEWVRSNA-KGQQKKNKARMERFEELNSKEFQQRNETSE-I 311
RL + ++++ L+ + +NA K +Q ++AR + +++ +E + + + I
Sbjct 250 RLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRAR--QIDKIKLEEVKASSRQNPFI 307
Query 312 YIPPGPRLGNKVVEVEGISKSFDGRLLYKDLTFTVPPTAIVGIVGPNGAGKTTLFRMMTG 371
+L +EVEG++K FD L+K+L + + ++G NG GK+TL + + G
Sbjct 308 RFEQDKKLFRNALEVEGLTKGFDNGPLFKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVG 367
Query 372 EQQPDTGTVTLGESVKVAYVGQIRD-TLDNNKTVWEEVSGGLDILRIGDYEIASRAYIGR 430
+ QPD+GTV E+ ++ Y Q + +N+ TV+E +S + GD E A R+ +GR
Sbjct 368 DLQPDSGTVKWSENARIGYYAQDHEYEFENDLTVFEWMS---QWKQEGDDEQAVRSILGR 424
Query 431 FNFKGQDQQKRVGELSGGERNRLQLAKILQLGANVILLDEPSNDLDIETLRALEDAILVF 490
F D +K LSGGE+ R+ K++ N++++DEP+N LD+E++ +L A+ ++
Sbjct 425 LLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMALELY 484
Query 491 PGTVMVVSHDRWFLDRIATHILSFENEQPEFYEGNYAEY 529
GT++ VSHDR F+ +AT IL E+ + GNY +Y
Sbjct 485 QGTLIFVSHDREFVSSLATRILEITPERVIDFSGNYEDY 523
Score = 105 bits (263), Expect = 3e-27
Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 37/231 (16%)
Query 21 ILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFSGEARAQPGIKIGYLEQEPPL 80
+ K+++L G K+ VLG NG GKSTLL+ + G + SG + +IGY Q+
Sbjct 334 LFKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLQPDSGTVKWSENARIGYYAQDHEY 393
Query 81 DPNKDVRGNVEDGVREALDALERLDQVFAEYADPDADFDKLAKEQEKLEAIIQTWDAHNL 140
+ D L E + Q E D A ++
Sbjct 394 EFEND------------LTVFEWMSQWKQEGDDEQA--------------------VRSI 421
Query 141 NNQLEIAANALNLPAWDSDVSLLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVSW 200
+L + + + PA +LSGGE+ R+ +L++ KP++L++DEPTNHLD ES+
Sbjct 422 LGRLLFSQDDIKKPA-----KVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIES 476
Query 201 LERFLKDFPGTIVAITHDRYFLDNVAEWILELDRGMGIPYQGNYSSWLEQK 251
L L+ + GT++ ++HDR F+ ++A ILE+ I + GNY +L K
Sbjct 477 LNMALELYQGTLIFVSHDREFVSSLATRILEITPERVIDFSGNYEDYLRSK 527
Score = 90.9 bits (224), Expect = 2e-22
Identities = 66/254 (26%), Positives = 125/254 (49%), Gaps = 39/254 (15%)
Query 329 ISKSFDGRLLYKDLTFTVPPTAIVGIVGPNGAGKTTLFRMMTGEQQPDTGTVTLGESVKV 388
++ F + L+++++ G++G NG+GK+T +++ G+ +P G V+L + ++
Sbjct 7 VTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERI 66
Query 389 AYVGQ---------IRDT-LDNNKTVWE------------EVSGGLDILRIGDYEI---- 422
+ Q + DT + +K +WE E+S D ++ D E+
Sbjct 67 GKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRIYALPEMSEE-DGYKVADLEVKYGE 125
Query 423 ----ASRAYIGRF----NFKGQDQQKRVGELSGGERNRLQLAKILQLGANVILLDEPSND 474
++ A G + + E++ G + R+ LA+ L +++LLDEP+N+
Sbjct 126 MDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFADPDILLLDEPTNN 185
Query 475 LDIETLRALEDAILVFPGTVMVVSHDRWFLDRIATHILSFENEQPEFYEGNYAEY----E 530
LDI+T+R LE + T++++SHDR FL+ + TH+ + + Y GNY EY
Sbjct 186 LDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEYMTAAT 245
Query 531 AYRQSRLGDDAVQK 544
R+ L D+A +K
Sbjct 246 QARERLLADNAKKK 259
Lambda K H a alpha
0.317 0.136 0.394 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 4348038
Database: abcb9a3dde7ad0958c4595bbabaecf87.SwissProt.fasta
Posted date: May 20, 2024 2:28 AM
Number of letters in database: 9,683
Number of sequences in database: 17
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
